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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072789 ID=TCONS_00072789|Name=TCONS_00072789|organism=Clytia hemisphaerica|type=transcript|length=1355bp
TGATTCTGTTGGCCTGAATCACTTTAGAGGGTTACTTCTTTCTAGTGAAA
TCCTTCATTTTTATTAagaagttattattttttgaagGTTTTGATTCAAA
ATGAGCAAAATGGCCACTTTAAGGAATTCTTCAGTTAAACGGACAACAAG
TGTTGGCGCAAAGAGTTCCAGTTGCTATGGAAGCTTTAGATGAGCCACTA
TATGTTAACGCCAAACAATACCATCGAATCATTAAACGTCGCCAAGCAAG
AGCTAAACTTGAAGCTGAaggaaaaataccaaaaactcGAAAGAAATACC
TTCACGAATCAAGGCACTTGCACGCCGTCCGTCGTAATCGAAGTATGGGT
GGCCGATTTGTCGGTAAACCGAACATGGACCTCGGCGCTGATGAGCCGGT
AACACCGCGTGAACAATCGACCCTTTCGAACGTTACTCAACATTCGGTAT
CAGCTTTGCCCACAGCGACTATGCTACCCAGTCACACAATGattcagatt
caaaataacattccTGTCATGTCTAGTACTGTACATAACACTGGTCCGGT
ACCTATAGTTGTTTCGACTGCATCTGGACTGGCCAGTTCTTGAGATTTGA
AATTAATGTAATGTATTTTTTCGCAGTTGTAGTTATCTAGTCAGTTTTCT
TGTAAACTGATAGAGTTTAAAACTATCAACCCATGCGTCATCTGAGCTTG
GGGTTTGAGTTTTAGTCAACGGAATAATATCATGTCAAATCGGGTCAAAT
CTTTATCTTTCAGTATTTGTCAAAGTAATGAATTCAGACAAATTTGATGT
CATTTGACCATGGTTTCTCGTGACCTATCTTCTCTTTCTGTACATGGATT
AGAACTATTAATAACAGTAAAGAAANGTATCTTCTCTTTCTGTGCATGGA
TTAGAACTATTAATAACAGTAAAGAAAATTGCAGATTGCTCCACGATTTT
CTAAACGAGACCTAGAGTAATAACGTGTGGCTGAGACATATTTTTTCTCG
ACTTTTACAAGATGAGGATCTACTTCTTTCTTTGTTTCCAAGTGGAATTA
TCAGGTAGTTAGGTATCAATCGTACCTAAAAAGTCATTCGTTTAATatta
taatttatgaaaaaattaagaGAATTATTTAGTTTTTGAATCTTAGTAAC
AAATGAACACATTGAGACATTGTTTGTTTCAGGTGAACTttttgtgaatt
attttttgtaaatattgtaaatattataaatttttaaagtgcgcctcttt
ttcatttttttttggttaAGAATTGTTTTAAGATTCAAGTAACTCTCCGT
TACAGTTATAATACAGACAAACTGAAAGAAATTTCTACAATCCTCTAATT
TTTCG Run BLAST on NCBI transcript from alignment at scaffold_84:140352..153492- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072789 ID=TCONS_00072789|Name=TCONS_00072789|organism=Clytia hemisphaerica|type=transcript|length=13141bp|location=Sequence derived from alignment at scaffold_84:140352..153492- (Clytia hemisphaerica)
TGATTCTGTTGGCCTGAATCACTTTAGAGGGTTACTTCTTTCTAGTGAAA
TCCTTCATTTTTATTAAGAAGTTATTATTTTTTGAAGGTTTTGATTCAAA
ATGAGCAAAATGGCCACTTTAAGGAATTCTTCAGGTAATGATGTTGTTTC
TTACAGACTTGTATGAGCTCTTCCAGAGATAAAGTAGAAAAAATGGATGT
GGATGGCCAATATTTTCAGTCATAAGAAGCCCAGCCATAGTAAAATTTGT
TTTAAAATGTCTCTAAAATTCTAGATGTTTTTCATTTGAACCATACCTCC
TCTGTTAAAGTAAAAGGCTCTTTAGAGTTGAGTGCGGTACCATAAGTTAG
TCTAATATTGACATCCCTCGTCTTTCGTCCCTTCTTTAGAGACAGGACTA
ATATGAAAGCTTGAACCACTGATTGAAAAAAGGATTATTCCTCTCTGATC
ACTTAGCAAAGAAAAACAGTTTCAACCTTTCTATCAATTTTAGCTAATAA
AAAGGTAGCCTGGGAATCCAAGCGTTAAACTTTGTTCACAGTCTAGTTTA
TGATATATTTTTTTCTATGCTTGTTTAACGCTTGGCGCAGGTAACTCGCC
TGCAGGGAGATTTTTCCCTGCAATGCAGGTTCGGCCTGATTGGCCAGCTT
TGGGCGTATTAAGGTGGTCGTTAACACTTCTGAGATAGGATCATCTTTTT
CGGGTCGATTTTTCAATTTTTGGTTTAAATTAAAGTTTGAACCTTGCTAA
ACAATATCCTGAAGTTTTATTTCATATAAAGAAGAGGAAAGTCGAAAACT
TTAGGTCTTTAGACACGTACCTGAGCAGATTTTGTGGTCCGCCCCAAACG
CCCGTCCCGCCGCCCGTCACGAAAATCGCAATATTAGCCCTTCTGGTTCT
TGGAGCGACTCCAAATTTTTACTGTCGCTACTTAGAGCCACAAAGAACAT
TCCCGGAAAATTTTACACCGGTACTGTTAATAGTTCCGGATTTATGACAA
TCGAAACAAACCCGCCATCTTGAATCTTGTCAAATTTCAAGTGTGGATTA
TTGTTAAAGGGAATGGCTGTTTCATGGCTTATTTTCTTGTAGTAAGTGAT
GGTTTGATGCTTCCTTTTTATATAAAGAGCTTCTCAAAACTCCAAGGAAC
ATTTTTACTTGATAAACTTTCTAATTTCCTTCCCATTGGGATCAAATTTC
AGCGCCACACAAAATGTGTGACAGGTACGTGTAATTTCTTTTGTTTTCTC
TCTCTCTTTTTAATTGTTTAATTCATAATTTATTGTTTAAAACGTCCATA
ACTTCTTCTTCAAGCTATCTATACACATTTAGTTGGATTTTGATAGTGAT
ATAGTTGATTTTGGTGTATTTCGGGGTTTTCGCAAAAGTGAAAGTGAAAG
TGCTCTTTATTAGACTTGAGCGCANNNTCCATAACCTCTTCTTGAAGCTA
TCCATACACATTTAGTTGGATTTTGATAGTGATATAGTTGATTTTGGTGT
GTTTCGGGGTTTTCGCAAAAGTGAAAGTGAAAAAAGTGCTCTTTCTTAGA
ATTGAGCGCAGCTTGTATTTCAAGTAATAGGGATAAAGATTTGCTTTGTT
ACAGTGAGATGTGTTACTTTAACCAATGAAAGGGTTAGGGAATACTTTTC
AATCACTTTTCACCAAATTTAAGCTTTTTCGCAAGCAAAAGTAAGGTTCA
CGCAACTTTTTTGTATGTTTGCGGTAATCTCAGGGTTCTGCGCGACACCA
TAAATTTGCTGAAATATGCAGAAGAAAATGGCTTTACTTTCTATCTTAAG
GTCAAAATTGAATCAGTGCATCAAGTTTAACTGAAATCTGTCAAAATTCC
CATATTGAAAGCTTTTTTTTCCTCTCTCTACAGCAAAAAATAGTTTCAGG
CCAGTTTACGCAAAACAGCAAAACCGGGGGTTTTCAATCTTGTGGCGGAA
GAATCTCAAGATTGGCTGGTCCGATTTACTTGGAATTTTGTACACAGCTT
TCTCTTAGTGCAAGGGGTGTTTTGAGTGAAACAGATTTTTAAAAAAATGT
TTTGTTGATTTCAAAATTAAAAAAAACAGTTTTTTGCATTTTTACCCCCG
GTTTTTGATTTTTTTTTAAAAAATTTTCACTCAAAACACAGTAGGTCAAT
ATTGTAACATAACTGCCAAATATCAAAATCTAACTCCATCTGGTTGTTGA
GATTCTTCTGCCACAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTATCATCATACAAAATTT
CAACAATATATCATTTATACATTTTGAGATATTTCAATTTGAATATTTTT
TGACATTTTCAAAAAGTTTGTTAACGACCACCTTAATTTATGGAAAAAGC
CGTCTCTGCAGAAAAAAGGAAAACAAATGAAAATGAAAACATAGATTCAT
TTAGAAACAAAATGGCTGTTGGCTGGATGTCTAAATACATGTGGCTGATG
TTTTGATGTGGTTTTTAGTAGTTTTGAAAGTCTTTAGAGCTTGTTAAAGA
GTTTTTATGGTAAGTTAATTATGTGTGTTTGCCTGGGTTTCCAAAGTTCA
GAAAGTCTGTCGACAAGGGTTCACACACAGACTGTTTATAACGTTCTGTG
CCAGACTAATCTACCTGCACCAAGCTCTTCAATCTTAGAACTTTGTGAGG
TGAGGTATTTTTGTTTTTTTCTAAGATTTTGAGCTTGGATTCCCAGGCTA
ATAAAAGGGTGTCGGAATTAGAAGAGGGATGTTGACATTAAACCAAGTTA
CGGTACCCAGCTGATGTGGATGATTATGTCCAGACGTTACTAATTGATAA
AATTGATTGTCAATTAAAATTGATTGTCGATTAAAATTGATACCATGAGT
GGTCCTAAATCCGACAGCCCTGCCTAAATCCCATCCCCCAAATACCATGA
GAGGTCCTAAATCCGACACCACTGCCTAATTCCGACCCCGCAAATAACTG
TTATGAAAAAAAATTCTATGTTTACAAACATTCCCTCTCTAAGTTGAACG
ATAAACTATTGCTAGAACTCTCAAAACAAAACATCTAAAAAGATTACTAT
AATGTTAAGATGTCAATAATTAATGTGATCAAAAACGTGTGAGTTGTAAA
AATAATTACCACCTTTATTCTGTATTCTGAATCTATTACTCTTGTTTAAC
GTTAAACAATTCGGACAATTTTGTAATAAAAAATTATTTTTGAATAAAAG
CAATTATTGTTATTTGGTTCAATTGGTTCAGTGTATCAAATTTCTCAGTT
TAGTTGACACTTTGGTATCTTCGTTGCGTTACAGCGAAAGGTTTGTTTTT
ATTTTAGTTTGCAGGCATCGAAATAAGGGATAGAAGAAAGTGTATCGCAA
TTTTTTGATAAGCATGATTTTGCATCCTAAAATGGATCAATTTTCAATTT
TTAGCGTGTAAGTAATCCAAAAACGCAATTTAATTATTAACAACTCATAG
AAGTTTGAAAATCCATTTTTCTGTTGTTTTTTTTGACGGACCAACCAAGT
CATTCCTTTTTGGATAAAGATCATTCAATAATTGATGAGACAATTGTAAT
TACTTTTTAATTTTATGCTATTGAATGTTTTGATCTGAAAATAAAAGATG
ACAAAACATTAAAGAAAAGAATAAACTATCAATATCCTCCATCCCCCTCC
AGTTTTCAGTTCCTTTGAAAATTTTATTGGGACTCATGCCCACTGTCCTG
TTTCTGGCACATATCTACGTGGTGCCTTACTAACACGTCGAGGTCTGGGA
GGGGTNTATGCCCACTGTCCTGTTTCTGCCACATATCTACGTGGTGCCTT
ACTAACACATCGAGGTCTGGGAGGGGTGGATGAAGGCTCTTCAGATGATT
TCTTCGGGGTGCCCATCGATGACGGCACTGCGTCTTTGGGTGTTCCAGGT
TGCGTCGCTGGTACACTAACGGGAGGCAGGGGCGAGATGGGCTGTGGAGC
AGCTGTAAGAGGTGGAATGACTGGTTCTCTTACAGGTGTAGCAGGCGGTA
GAACAATCAGACTTGATGGCAGTGGAGTCGACTGTTGTTGGGGTGGTCTA
AATTGTTGCACGGTTCGTCTCTGCAGGTTGGGATCGTCAGGTCTTGGCAG
TTTGAGAGTTCTTCTTTGGGAGTGGCGGCAATGGAGGTCCAACAAATGCG
TCTCGGTTGGTGATGTCAACAGAGGCTGGTTCGAAACGTCGAAGGTAGCG
TCGGTTGCAACGGGTTAGACGATCAGTGTCATCAGCTCTTTGATTGTGCC
AGATCGGTCCCATCGTTTGGGGTTGTTACCAGTCTGGTTCTGGATATAGC
ATCTGTCACCGAGGCGGAGGTCAAGGAGCATGCGAGAGTGGTGGTTCCGC
TCTTCAGCAGCATGATGGAATCTGTGACGTAGGGCTTCCTCTTTCTGTTG
CCAAGCTGCGCGCCAGATAGGACGGACATGTTCGTTGCTGAATTTATCAA
GGCGATTGATGAATGCAAATGCGTCACGGATGGGACGACCAAATACTATC
TCCGCAGGTGAAAGTTGACAATCAGGGTCAGGTGTGTTACGCAGTTGCAT
CATTGCCCTCAAAAAGCGGTCAGTATCAAGCATTCCAGAAGGACCAGTGT
TCGAACAAAGCAACCTCTTGGCAGACTTGACCGGAACCTCAGCGTGACCG
TTTGATTGGGGATTGTAGACTGATGAGAGTCTGTGTCTGACACCCCAGCG
CTCCAAGAAATCTTGAGTCAATCCAGACATGAATTCAGGGCCACCATCAC
TTGACATTTCCTCTGGTACACCGAATCAGGCAAAGTAGTTTCGTAGACAC
GTGATGAGTCCTTCAGATCCAGCTTGTGGTGATCCTTTTGGGGCTTGGAA
GACATCGCCAACTACGAGGTAGTGCTGTCCAACGCAGTCAAAGAAGTCAG
CATAGCTTTGTTCGAATGGAGTTGTTGATGGTGAGGCTGGCGAGGTAGGT
AGGGAGTGGGATGGTGCATTACGGATACACTCTTGGCAGGCTTGTCTGCG
ATGCTCAATGTCATAAGTCATCCCTGGCCAGAAGACGATGGAACGTGTAC
GCAGACCCATGGTTGATACGGTGGGCGGCATGAAGGGCATCAAGGACTGC
AGGTTGTAACGATTGTGGAATAACAACACGATCATTGTAGATGATGACAC
CATCTGTGATGTGAAGACTGTCACGGTACTGCCAGTAAGATGAAGTAGCG
TGGTGGTCACGATAGTTTTCGGGGAAGCTGGCAAGAACAGCTTGGTATAC
GAGGGCAAGATTCTGATCGTTTTGGGTTTCGGATGACAAGCATTCCAGGT
GATCGAGGTGACCTTTTCAGCATCGTTGCGGATGGCAGCAGCCACCATGA
ACTCGGGCAGCATGTGATCAGGTAACTCCTCCTCATTGGATGGTGATGGG
TGGCGAGATGTAGCATCAGGGGCAAGATTGGTCTTCCCTGGGACATGAAT
GACACCAAAGTACCAGGGCAGGCTCCTTTCTTTCAGGCGAAAAAGTCGTG
TGTTGTGAATTTCATCTAAAGTTCTGTCACCATATATTTTAATAAGAGGC
TTGTGATCGGTAGCTACAGTCAATACACCGTTTAACAGTCTCGCCATCTC
CACCGAGAAGCGGTAGGTAAAAATGCTCACTTTAGTACTGTGGAAGGTTA
GAGAAATGTAAACATTGCCTTTTTTTTCTTTCCTTTAAAGAGAATGTTTT
AGATGTTTGAACATGACAATTTTATGTATCTCTCCTGAAAATTTCACAAA
AATTCATCTAGAGGAAAAGAAGTCATGATTGAAAGGAGTTCTTTACCTAC
CATTTCTCTGCTGGGTTTTCTTATGAGAACTGGATGTTTACCTACCATTT
TTTACGGGGGAGAGTGAAGTTTCCCATGATTGCCAAAATCAAAACAATGG
AAAATTGTTCTTACACATGCGCAGTCGACACTGTTAAACGGTGTATTGAN
GTTGCCAATATCAAAACAATGGAAAATTGTTCATACGTGTGCGCAGTCGA
CACTGTTAAACGGTGTATTGATCACAACCTAAGGTGAAGTATTTCGTTTG
TTTCAGCCCCCAGGTGATCGCGAGGGCCTCACTTTCAATCTTTCAATTGG
TGCGTAGTGTTCCTCAGTTGGCTTGAGGAAACGGGATCCAGCCAAAGTAA
TACGCCAGCCATCCTGACAGCAGTTTGGCTTGTCGTCTGCACAGTCACAA
TATTTTTGTTGTAAAAAATAGCCAACGCCACGCTTCGACCAGTCCATGCG
GAGACACATAGGTAGGTGGAGGTCGAATATTTCAACACCTGATCGAATAG
CTTCAACAATGGCTTTCTTTGACGCTGTGAAGGCACGATCAAGCTCAGGG
GTCCATTTGAATGGATGTTTTGGAGAGAGAAATGGACAGAACGGTTCTAT
GTGTTCACGGAGCTGTGCGTAATTCCCCACCTGGTTGTAGTGCTGATGGG
CGTTGGGAAATTCTCTATGGCATTGTAGAATTTTGGGAGTGGTTCTATTC
TCTCATCTGAGATGCGGAATCCGGCAAAGTCAACGGCTCTGCCAGCGAAT
TGAAACTTTTGCGGGTTGAGCACGATTCCTGAACGACCAACTGTTTTGAG
GAAGTCGATTGTTTGCCACCAGTGTTCTTCCAGACAGATAAAAAGATTCA
CTAAAGTCTGTCTCAAAATAATTTGCAGCTGGAGACAAAAATGGCTGTAA
CTTTTGATAGAATTCGAATCAAGTTGCGATTGTGTGCTCGTTAAAAAGAT
TTTCGTGAGTGGAATATTATCAAGTAAAAAATTTGAAAAAAAATGAAAAA
TGAAAATGAAAAATGAAGAAGAAAAAAATCAATTTCTTGTAGAAATGTGG
TATAATTACCATTTTCATAGGAGTGATTCTTCAATCTTAGATCATCATCA
CTGTCAAAAAAAAATTCAAAAATATTCATTCAATCAAAAGATACCTTAAG
GGAAGAAATTTTTGCGAGAAGAAATTTTCGCGGAATTTAATTTCGCGAAT
CAGAGTTTCAAAATGGCAAATTTCGCGGAATTTAATTTCNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNAGTTGATGCACAAAGGTTTCTAGACGACTAAAATTGTTCCATTCATTA
CTTTTTGCTTTATTTCTACTATGTATAAATTAGTCGTCTAGCTTGCTAGA
CTAACTTAAATTAACTTTTAACCATCACTGAGTTATTTATATTTGTTTAT
ATTTGATAAGAAATACACGTTATAATGCTTAAAAATCAATTGTGTCCATA
TTTTTTGGTAATACCTGGTCAAAAACAACAAAATAAAAGAAGAAGAAAAA
AAATCGAATTTCGCGGAATTTAGTTTCGCGATTTAACAATTTTGGTGTGT
TTCGCGGAATTTAATTTCGCGAATTACACCCAAATTCGCGAAATTAAATT
CCGCGAAAATTTCTTCCGCGAAAATTTCTTCTCGCGAAAATTTCTTCCCT
TAAGGTATCAAACAAAGTTTATTGCTGGTTGAGTCTATAAACTAGTAAAA
AACGAAAAAAAACAGCCTTTTGTCGATTGTAATTACTTTTTAATTTTATG
CTATTGAATGTTTTGATCTGAAAATAAAAGATGACAAAACATTAAAGAAA
AGAATAAACTATCAATATCCTCCACTTTGGCCTAAAGACAATGCAATTTT
AAAAAACGGGGGCACCTAATTGCTGGGGGTTTTGAAATTGTACTTCTGAA
AACCCAAAAATAAGATAAATATAGGCTAAAATCAGGCTATTTAGAGCAAA
ATAAGGGGCCTTCTCATTGACAGCTGAAAATATTCTTAAAATTAATACTT
ATTTTGTTTCCGGTCCGTTGGCCGGGTGAAAATCTCTACCAAATTATAAA
AAAAATTTCTGAGTTTTATACAATTTCCCATTTAAACATTTTCTACACTC
AAGTGATCCAGAAACTTTCCCCCATCTTATCGATTTCACTTTTCAAATTT
TAAATCAGAATTCCTAATATGAATTATGCTAGGCTTGAAGTGAAGTAGCA
TCGTCATGTATTCTGTCAAGTGACTGGCTGCCCGCAGGACTTTTTTCATC
ACTCTGAGGTCCAGAAAGATAAAATCTCTTACAGTCGGTATAAAAACTTT
TTTTTTTCTGTTAGCCTAAGGGAAAGTAGGTTTCTGATTCTAACTTTTGA
TATTGATCTTTGTTTGGCAAAATATTTCCAGGGTGTTGCGTTAACATTAA
AAGTAACAAACTTAAATACAGTAGACTCTTAAATTCTGACGTCAGCAGAC
GTCAGTAAAATTTCCGAAAAAACGTTTGCCTGAAATATGCTGATGACAGC
AAAAGAAATTAAATTGGTGTGTTTCAGGCATCAATGCAGGCTCCTTTTTT
ATGTTATATTGAAAATTTCCATTTTTTTAGTTTTGAAAATTTTATTCATC
CACGAAAGAATTTTATTTTTTGCTTTTTTCACATTTATATTTTCCTTGAA
AAAAGTAAGGTGTTCGAAAAGTAAGGCTTGTGCAAAAAAAACTATTTCAA
GAACTGCGCAAAATTATAAAAGTTAATTGGATTATGGTAGCTCTCTTATT
TCAGCATTAAAATTTTAATATCTTTTGCTACTAGATCAGGCACTTGAGAT
ACTACAAGTATTCAATTGTCATGCTAACAAAAACATTATTGAATTTTGCT
TAGGTGTTTCATTCAAGTGTGTGGAGTGAGAAAAGGAATTTAAACTAAAC
AAAGTAGAATCTTTTATGCCATTAAATTTGGTAAGGAGATACCATCGTTT
TTTCATAAGATTCTACTTCCTGCCCTGAGATTCGACTAACTTGTCTAGCT
GAAAAATGAACTTCGGAAAATTAGACAGTTTCGTCAGTCAGCACAAGATT
TTCCTTACCTTGAGAAAAAAATCTTTTCCAATCTTATACCGGTTATCCTG
GGGAAAAATCCCTGAAAAGTCTGTATAATCTGAGTAGGGGAAGTTAAATC
TTATGCAAAACGAGGGTAGAATCAAAATATGAATAGTGCAATATTTTAAC
AATTCATCTTGAAACGGTTGGAGTGAAGGAAACATAAATTTACTCATCTC
TATTACAGTTAAACGGACAACAAGTGTTGGCGCAAAGAGTTCCAGTTGCT
ATGGAAGCTTTAGATGAGCCACTATATGTTAACGCCAAACAATACCATCG
AATCATTAAACGTCGCCAAGCAAGAGCTAAACTTGAAGCTGAAGGAAAAA
TACCAAAAACTCGAAAGGTATCAATTATATCTCCTTAAGGATATTCTTTA
TTTTTTTGATATTATTAGTCTTACATTCTTGTAAATCTTGTTTTGTTTTG
AGTGAATAATGATTTATTTCCAAAGGTTATTCCACATACAATATATTTTA
TTTATGTATATGCAATGGTTTACAACAAATGATTTTATAGAATGTTTTTC
ATCCTCATAAGGCGATTACTGAGCCCTGTAAGGAGAAATTATCTTGTGAA
AGCTTTAGTTTGACATAAAACGTCCTTTCCCTAAGTCTTTTGTCTGTAGA
TTGTAAAGATGGTCTTCAACTCTACTTGCTATTGAGAGATTTGAAAGATT
TTTATTTGATTCATTCTTTTTGTTCGTAGAAATACCTTCACGAATCAAGG
CACTTGCACGCCGTCCGTCGTAATCGAAGTATGGGTGGCCGATTTGTCGG
TAAACCGAACATGGACCTCGGCGCTGATGAGCCGGTAACACCGCGTGAAC
AATCGACCCTTTCGAACGTTACTCAACATTCGGTATCAGCTTTGCCCACA
GCGACTATGCTACCCAGTCACACAATGATTCAGATTCAAAATAACATTCC
TGTCATGTCTAGTACTGTACATAACACTGGTCCGGTACCTATAGTTGTTT
CGACTGCATCTGGACTGGCCAGTTCTTGAGATTTGAAATTAATGTAATGT
ATTTTTTCGCAGTTGTAGTTATCTAGTCAGTTTTCTTGTAAACTGATAGA
GTTTAAAACTATCAACCCATGCGTCATCTGAGCTTGGGGTTTGAGTTTTA
GTCAACGGAATAATATCATGTCAAATCGGGTCAAATCTTTATCTTTCAGT
ATTTGTCAAAGTAATGAATTCAGACAAATTTGATGTCATTTGACCATGGT
TTCTCGTGACCTATCTTCTCTTTCTGTACATGGATTAGAACTATTAATAA
CAGTAAAGAAANGTATCTTCTCTTTCTGTGCATGGATTAGAACTATTAAT
AACAGTAAAGAAAATTGCAGATTGCTCCACGATTTTCTAAACGAGACCTA
GAGTAATAACGTGTGGCTGAGACATATTTTTTCTCGACTTTTACAAGATG
AGGATCTACTTCTTTCTTTGTTTCCAAGTGGAATTATCAGGTAGTTAGGT
ATCAATCGTACCTAAAAAGTCATTCGTTTAATATTATAATTTATGAAAAA
ATTAAGAGAATTATTTAGTTTTTGAATCTTAGTAACAAATGAACACATTG
AGACATTGTTTGTTTCAGGTGAACTTTTTGTGAATTATTTTTTGTAAATA
TTGTAAATATTATAAATTTTTAAAGTGCGCCTCTTTTTCATTTTTTTTTG
GTTAAGAATTGTTTTAAGATTCAAGTAACTCTCCGTTACAGTTATAATAC
AGACAAACTGAAAGAAATTTCTACAATCCTCTAATTTTTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072789-exon-scaffold_84-1575043694:153359..153492 | TCONS_00072789-exon-scaffold_84-1575043694:153359..153492 | Clytia hemisphaerica | exon |
| TCONS_00072789-exon-scaffold_84-1575043694:141776..141934 | TCONS_00072789-exon-scaffold_84-1575043694:141776..141934 | Clytia hemisphaerica | exon |
| TCONS_00072789-exon-scaffold_84-1575043694:140352..141413 | TCONS_00072789-exon-scaffold_84-1575043694:140352..141413 | Clytia hemisphaerica | exon |
| TCONS_00072789-exon-scaffold_84-1510915933:153359..153492 | TCONS_00072789-exon-scaffold_84-1510915933:153359..153492 | Clytia hemisphaerica | exon |
| TCONS_00072789-exon-scaffold_84-1510915933:141776..141934 | TCONS_00072789-exon-scaffold_84-1510915933:141776..141934 | Clytia hemisphaerica | exon |
| TCONS_00072789-exon-scaffold_84-1510915933:140352..141413 | TCONS_00072789-exon-scaffold_84-1510915933:140352..141413 | Clytia hemisphaerica | exon |
| TCONS_00072789-exon-scaffold_84-1491911889:153359..153492 | TCONS_00072789-exon-scaffold_84-1491911889:153359..153492 | Clytia hemisphaerica | exon |
| TCONS_00072789-exon-scaffold_84-1491911889:141776..141934 | TCONS_00072789-exon-scaffold_84-1491911889:141776..141934 | Clytia hemisphaerica | exon |
| TCONS_00072789-exon-scaffold_84-1491911889:140352..141413 | TCONS_00072789-exon-scaffold_84-1491911889:140352..141413 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_84 | supercontig | scaffold_84:140352..153492 - |
Blast
BLAST of TCONS_00072789 vs. Swiss-Prot (Human)
Match: NFYA (Nuclear transcription factor Y subunit alpha OS=Homo sapiens GN=NFYA PE=1 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 6.316e-26 Identity = 52/69 (75.36%), Postives = 58/69 (84.06%), Query Frame = 3
Query: 159 QRVPV-AMEALDE-PLYVNAKQYHRIIKRRQARAKLEAEGKIPKTRKKYLHESRHLHAVRRNRSMGGRF 359
QR+P+ E L+E PLYVNAKQYHRI+KRRQARAKLEAEGKIPK R+KYLHESRH HA+ R R GGRF
Sbjct: 250 QRIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARKRGEGGRF 318
The following BLAST results are available for this feature:
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