TCONS_00072781 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072781
Unique NameTCONS_00072781
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2900

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072781 ID=TCONS_00072781|Name=TCONS_00072781|organism=Clytia hemisphaerica|type=transcript|length=2900bp
ATtcaattaaaaatacatttctCTTGTTGCAtaattggaaagaaaaaatt
aaaattcatggTCTTCCTCGATGAGATATATAAACAAAACCACACGTCAG
ATCGTCAGATAATCTAAAGTGATCAAATTCGTTTTGTCATTATTATCATT
GTCAAGGTCAAAGACGGATGTGTTTTGCATATAAATGCTCCTTTAGAATG
ATATGCAAAAACAGACTCTGCTGAATATTGCAAAAGGACCTCCACCCACT
TCATCAGCAACTGAATCAAACTTATCTTCTACCAACAAATCAATAAACCA
GATTCCTTCTGAAGATAACAACACTAAACCACAAGTTGTACCAGAagttg
ataagaatacagtctcCTCTAGCAAAGACGAGGCTCCTTTCACAAGATCA
TCctacaaaaagaaatcaaaacaacaatcaAACAGTGATATTGATCTAGC
ACAACCAGCAATAATGGGTTCAGGTGGCAAACTTAAAGTTAAAGTGTTGA
ACGGACGAAAGCTACAAAACAAGGAAACCTTCCAAACAAGTGATCCCTAC
TGTATGTTGGAGATTGGTGAGAAGAGTGCCAAAACAAAACATGTCTCAAG
TAATTTGAATCCTGATTGGAatgaagattttgaatttgACGTCACCccaa
ataatgattttttgacactttcaaTTTGGGATAAGAATactataaagaag
gatgtcttCATGGGCTATGCTTTCGTATCTGTTCATGATTGCAAAACAGG
AGAAAATACACCGAAGAGTGCAGATATGCTTGGAGGATGTTCCGGTACCA
TAAATTTGATTGTCTCTCCACAATATGAAACATCAGCTTCACAAATTGAA
AGACTCCAAAACCAACTCAAACAACTAGAAGGTCAAAATCAACAAAGCAT
GGCTGATAATGCCAATGGTCAAAATGAGATTGCACGCCTCAACTCAGAAG
TCAATAGAATGGGTGCAGAAAATGATAGATTTTCTGCCAATAACCAAAAA
CTCGAGGAAGAAAACAAGAAATTCGAGGAAAACAATAACCGTTTAGAAGC
ATCTGTCAATAAATTGGAAGGAGAGAATAAGAAGTTTGAAGAAAATAACA
ACCGCCTTGAATCCTCTGTCAACAAGTTAGAAGGCGAAAatcaaaagttt
gaagaaaacaaTAAGAAGcttgaagaagaaaacaataaatttcAGGAAAA
CAATGCCAAATTAGAAGCTGAAGTTAACCGCCTTGGAACTGAAGTAAACC
GTATGACCGAagagaataacaaatttgctgaaaacaacaagaaacttgaa
gaaaatgtcGGACGCCTGGAAGGAGAAGTAGACAAAATGGGGCAACTCAA
CAAAGAGTTTGAAGAAAACAATAATCAATTGAAGGAAAATGTCAACAAAC
TTGAAGGAGAAGTCAACAAGATGACTGAAGAAAACAACAAATTCGCTGAA
AACAACAAAGCTCTCGAAACACAAGTTAATGGACTTAAGGATGAAGTTAA
CAAGATGAGTGAAGAGAACAACAAATTTTCTGCAAACAACGAAAAATTGA
GCCAAGAAGTTTCCAAAATGGGCGAGGAAAACAACAAGCTggccgaaaat
aatcaaaatttgtcAGATGAGATCAATCGATTGAAAGCTGAAATTGACAG
AATGGCTGcagaaaatgccaaatttgcTGAAAACAACGAGAATCTTAAGA
AAGAGGTTGACCGAATCACTGGCGAAAATGAGAAATTTGCAGAAAACAAT
AAGGTCTTACAAGAACAGAACACCGTATTCATTGAGAATAACAAACAACT
AACCAACACTGTCACCGAACTCAAAGAACAAGCTGACAAATTCAGAGAAA
TCTATCAAAAATTGTTAGCAGAAAATGAGAAGTTGGCAAGAATCAGAGAT
GGTCTACAAGAACAACTTGACGGTTTCGCGAAATTACAAGAGATGATTTT
CAaacaattgaatgaaaaaatgcGAGCTATGGATCGTTCATTGTTGGAAA
AAGTTGCTGCTGATATTGAAATGCTGGATCAAGATCAAGgTCTTTCTCAA
GACGAATGGGGCAAATTCATGAAACGCGTTCCGACTCATCTCAAAGAGAA
GTTTGAAGGCATTAAGGATGACTTTACCTCATTCGACGAAAATAAAGACA
ATGTGATTGATTCAGATGAATTCGGTAAAATGTTGGATGAAGTCATGAAG
GAGACAGAGCCATCAGCAGCCAGCTCTGGTGATGAGCAACGTTAGATTCT
GGAAATCGAAACTATTCGTATTGATCATCTACTTGACAAGTGACTTTCCA
GAAGGTAGACGATTTAAAAGACTTTGTTTTTAGAATATGGTTTTGATATA
CTCAAATGAACTTCAGAATGTTCGATTGAGTTAAATATTCAACTATCAAA
AGATGAAGTCTGTCATGTCAACGACGAAATGACTACTAATTGGATTTTGT
TTAAATTCTGTTGAGACATGACAATTTTTAATGTGTTTAAGGTTCAATAA
ATCTCcaataaaaaaatgatatttttattttattttgaaaactatGAAAG
AGCTTTTCTATTACAGTATGAATAATATTTTGTCCGAAGCCTTCTGttaa
atataaatttctttGTTAATATATTTCGTATCAAAGTTATCGTCGTGGTG
ATTTTAAAATTCTGATTCGGCACCTAAATTATATACTCTAATCATTATGG
ACCTAATTTGGGGTTGGGGATTTGGGATGAGTCTTGTATGTATTTAACTG
TCATATTATTTTCATAGTCTTAGATTATTTTTGTACTACAATTCTTATAT
TTTTGCTAAATATTTCTTACAATTTCTATATTTCTGTTTTATCCATAtac
attcaaattttgataaaaaatttaaaatcatcttcttttttataagtgGT
Run BLAST on NCBI

transcript from alignment at scaffold_84:15174..25029-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072781 ID=TCONS_00072781|Name=TCONS_00072781|organism=Clytia hemisphaerica|type=transcript|length=9856bp|location=Sequence derived from alignment at scaffold_84:15174..25029- (Clytia hemisphaerica)
ATTCAATTAAAAATACATTTCTCTTGTTGCATAATTGGAAAGAAAAAATT
AAAATTCATGGTCTTCCTCGATGAGATATATAAACAAAACCACACGTCAG
ATCGTCAGATAATCTAAAGTGATCAAATTCGTTTTGTCATTATTATCATT
GTCAAGGTCAAAGACGGATGTGTTTTGCATATAAATGTAGGTGTGTTTCA
TATCATATTTCTCTTATTTGAAGAGGAAAGTCAAATCAGTTACATTATAG
CTACCAAATCAAAACAAAATGGAAAAAAATGATAGCTAAGTATTTTATAG
GGTCCAGTGAAAAGCAGATATGCTTTTACAACTTTGTTAACTTTAACTAG
TTTGATATCCCTATATATATATGTGAAGAAATTCAAAGAATATCTGTCCA
ACTATCTTCTTTCAGGAGATTTGGGTGGCAGAGTAGCATATGCATTTCGT
CCTTATTAGGACTCGTCAGCACAGCATACTGCACCCTGGCTAGCCAGATC
GAATTGCCTAGCATCTCACGCCATAAAACTAATTGTGGCGCAGACTGAAA
GAAGAAGTGGACAAAGGGAAATTCCCTAGGGAATTCTGTGAATGACTCCT
CTGGAGTCGAGCTTTGGAGAGAACCAAGATGGAGGAAAGCCTCAACACTG
CATGGTCTCAAAAAAGAATATATATGTGAAGAAATTCAAAGAATTTCTGT
CCAACTATCTTCTTTCATGAGATTCGGGTGGCAGAGTAGCATATGCATTT
CGTCCTTATTAGGACTCGTCAGCACTGCATACTGCACCCTGGCTAGGCAG
ATCGAATTGCCTAGATAGTTTTATGGTGTGAGATGCATCTCACACCATAA
AACTAATTGTGGCGCAGACTGAAAGAAGAAGTGGACAAAGGGAAATTCCC
TAGGGAATTCTGTGAATGACTCCTCTGGTCTGATATATAACGAAATGCTG
AAACAATTGATTTATAAAAAGGAATGTAACCAAGATAGATAGATTTATTA
TTACTTAAAGAAAGGGAAAAATGATAAGGCGAATAAGGCAGTTTGACGGT
GGTAGATGAATTGAGTTATATTTCAAATCGAGAGATAAAATTCCAAAATG
CTCTCAAAAAAGAAAGTTGTAAAGAAAACAATAAGATGATATTTTCATTA
AAACTTATCAACATGACATTGTGTCTTGCAAAAAGGTCTATGAATATATG
TTAACTAATTACTCCAGTGGAAATGTTTTAAGAAAATGTCATCTTAGGTA
TTGTTTTCTTTACAACACAGCAACCTAGGAACAAGATAATTTATCCCGTT
TGTACTAGCTTAGGGAAAGTGGTATGTGGAGTAATTTGTTATTCAATAGA
CTGTTGCGTTCTCCTAAAAGACTATTAAAAACTCCAGCATTAAAAGGGAT
GGTTTAAGAAGCAGGGTAGCCAATTCGCTAGCCCCTTTATTACCCAAATA
TTTGAAGTCTAGTATTTTAATTTGTGAAAGTACAATGTTAGAACCTTTTA
ACAGTCATTTAAAGAAATCGGTTTAAATTGATTCCGTAACTTTTGTTATA
TACTGTAGTCATTTTTGTAAAAAGTGAGAAATAAAACCTACTTCTGTTTA
CTGAGTCGCAATCTTGTCTTCCTTCCTCTCACACTTTGAAGAATTGCAGA
CCAGACCATTTTTATTGTTAAAAGTAGATACAGAATATATTTTGATCCCC
AATATTCTAACAGAGACTTAAAATGAAAATCAGAACAATGGGTAATCTGA
GAACATCAAATGAAAATTGGATGCAAAACTAGTATAAAATTGTAGCAGAA
TGGTTACAAAAATAGTAAAGTATAATATGTAAAAAAAATTTTGGGCTATT
TTGAAATTTTTTTGCGCGTATTTGATTTTGCGTACCTGTGCGTACTAGAA
AACAATTTTTCAAAATTCTGATTAAGCAAAAAAAATGGCTTTTAGTTTTT
TAATAATTTCTGCTGACGTCATCAAAATTTTGAAAAATTATTTTTTTCAA
ATGGTCGAATTTAATGAGATACATTTTTACTGAAAGTTTGAAGACAATTG
GATAAACAATTCATGAGAAATTCAATTTTTATTTTTTATGACGTAATCAG
TTTTTGCAGTTTTTCGCAAAAATTGACAAAAAAACATTAGGTTACATATC
AGGTTAGAAACTACATCATAGTACCCTTCATGTTCAGTCATTTGTTTTGT
CATTTTCTGTCTGCTAATGCGATTTAAAAAATCATGGTAATTCTAAGACC
TGCCATAATTTACCTGAGAAAATTAAGTATATACACACAAAAATTTAGTA
CCCTGCGAAAATATATACACTTGAGTTATATAATGAAAAATCCTTAAAAC
TCATGATCTTCATCTCGCTTAGAATGAGTAAGATTGAAGTTCTGTTTTCA
ATCAATAGATATGCAAGATGATTGAGTAGATTTTTAAGATTGAATCATTA
AAACGTAGTCATCTAAAAAAACGGCTATTCTTTTTTAGAATCAACCTTAC
AATCTAGTTTTTATATTTATAAAAACTAGATTGCTGACGTGTGGAAAGGA
ATGTCGGCGTGACTGATCCCTTTGTTTCGATAATAACATCAAAGCGGGAA
CTAATTTTCTTCTCGTTTCTTTCTTTCCTTTTCCTTTCTAATAAATTCAA
GCTTTCCCTCGTACTCTCCAAGCGTGGTTAGCTCAAGCGGTTAGAGTGTC
TGTCTCGAAAGCATGGGTTTCCGAGTTCGATCCCGCTGGGTATCAAATTT
TTCAATTCTTCAAATTTCTTTTTTTAATTCTCTTTCTATTATAATGAAGG
TCAATCAAACAAATATTTAGTATATATTACCTCCGCTCTCTGTGTAAGGT
TTAGATAAGCTATGATAACATTACTTAATAAGAACTTCTTTAAGTTTTTT
TTTCTTCAATCTTTTTTTTACCACAAGCGATTATTCAAGGCTGAGATATA
GAAGAACGGGTATAGGCGTTTGCGCCTGCGTTTGCTGACTGACAATTTCA
GTTTCACTTTCACTACTTTCACTTTCACTTTCAGCCAGCGGTGAGCAAGC
GATTCTTTGTAAGAGAACCNTCGCGAAAATTGACCAAAAAACTCGCGAAA
TTAAGTACCCGCGAAAATTTGTAACACGCGAAAATATATACCAATAAGGT
ACTTATTACCTCATTATCAATTTTTGATCAGCAGTGCGTCACAAAGTGTG
ATATTTTGATTGCAGGGAAGCACATCACAACATCAGTTTTGATATAATTA
CGGGGGTGATTTGATTTCTGGGTCAAAATTTTTGACACTTGATCCAATCG
TGTGCTTATCTTTCTTGCGTGGTCGTCATTTGAATTTCAGTATTCAATGC
TTATAAAATACGGTTGTTATAAGGGTATTAAACTCCTCACTAGGAGGGAA
CAGATCGTAGATTCGAATTGAACGCGTAATTACTAATAGCAATTAACATT
ACATAACGCGTCGATATTTCTTCACTCTCATGAAATGTGATTCAAAATTA
AAGTGATGAGCACAAAAACAAAATCAAGAATTGGAAAATTTGTCACCCAG
CGGGATCGAACTCGGAAACCCATGCTTATGAGACAGACGCTCTAACCGCT
TGAGCTAACCACGCTTGGAGAGTACGAGGGAAAGGGTGAAGTTACGAGAA
AGAAAAAGGAAATAAAGAAACGAGAAGAAAATTAGTTCCCGCATTGATGT
TATTATCGAAACAAAAGGATCAGTCACACCGACATTCCTTTCCACACGTC
AGCAATCTAGTTTTTATAAATATAAAAACTAGATTTTAAGGTTGATTCTA
AAAAAGAATAGCCGTTTTTTTAGACAACTACGTTTTAAGTAAACAAGTCA
AAAGATAAAAATGTGTCTGCTTTTTACATGAAACAAAGCATATTCAAATG
CATATCGACCTGATTGCTGTGTAGAAACCGATTTTTGACACTCAAAAAGT
TATTAAATCAAAACCTGCTATTTGATAAAAAATAAAGACCTTTTTAAGTT
AAAACTGATATTCAACTTTAACTTGATTGATTTTAATTTTTGGACATCTG
CTCCCTATAATTTAGAGCTATTGTCTTTATTAGGTCATTGTCCTGACACA
TTTACTGTGCAAGTGAAATTTTTGATTATCTTTGAACTTGGGAATTGTGA
ATCAAAAAGTTTTTATGTAGATTAATTTTGCGAGGCATCCTCTATTTCAC
CCAATTTTGGGATTTTTTAAGGTTTCAGGATGATTAATTTTTGCAGAAAT
AGCCGATATTAGTAAAAATCTGAAAATTCAATCATTTTGAGTTAAATTTA
TTTGGAAGAAAAAAAAATCAGATAGCAATCAATATTGTTGACATTGTTGA
CAGGAAACAGAAATACTCTTAGGTTCTAATGAATTCATACATCTTCTCAA
CTTTTCTCAGTTTAAAACTTTTCACCAAATGAAGAATTTGTTTTTATTTC
TCTTAGTTAAATACTGATTTTTTAAAGACCAATTTAAAACGAATAAAGGC
TCAAATTTTTCTCATTGTTTACTCAGTTTGCCAGGCTGCTTTGTAGAAAC
ACTTTTCCTTTTTTATAATAATTCTTTTTTACAAAGATTGTGGTAAAAAT
CCATTACTTTATATTGTCTTTTTCAGGCTCCTTTAGAATGATATGCAAAA
ACAGACTCTGCTGAATATTGCAAAAGGACCTCCACCCACTTCATCAGCAA
CTGAATCAAACTTATCTTCTACCAACAAATCAATAAACCAGATTCCTTCT
GAAGATAACAACACTAAACCACAAGTTGTACCAGAAGTTGATAAGAATAC
AGTCTCCTCTAGCAAAGACGAGGTGAGTTATTTTTCTTTCTTTTCTCTTG
TTGAGGTATCAAGGTTAGTCATCTTTTCATATGTTGATCAGTAGGTCACT
TTAATAAATCTATCCTGTGAGTGCAATATATTTTTGCCAGACGAATCATT
GTAAAGTTTTAATTGGCTGGTTCTAATTTGTGTCTTGTTTCATTTTCCTT
TCATCATGGCTTGTATAAAGGCTCCTTTCACAAGATCATCCTACAAAAAG
AAATCAAAACAACAATCAAACAGTGATATTGATCTAGCACAACCAGCAAT
AATGGGTTCAGGTGGCAAACTTAAAGTTAAAGTGTTGAACGGACGAAAGC
TACAAAACAAGGAAACCTTCCAAACAAGTGATCCCTACTGTATGTTGGAG
ATTGGTGAGAAGAGTGCCAAAACAAAACATGTCTCAAGTAATTTGAATCC
TGATTGGAATGAAGATTTTGAATTTGACGTCACCCCAAATAATGATTTTT
TGACACTTTCAATTTGGGATAAGAATACTATAAAGAAGGATGTCTTCATG
GGCTATGCTTTCGTATCTGTTCATGATTGCAAAACAGGAGAAAATACACC
GAAGGTATATTAATCTACAAGATTTTTTATCAGAATCTTAAAAATATTGC
TGTCAGCTATTGCAAGGTGCAAAATTAAACTAGAGCTGTACAAAGAAAGA
TCTATTGGTCTCAACATTTTGCTGTCCTTTGATTATCAAGAAAATACTCT
TCTTTAAGTAAATTGTCTTATTTTAAAAATATTATAATTCAATATTGCAT
CTGTCTCTTACTCTTCTCTTTCAGAGTGCAGATATGCTTGGAGGATGTTC
CGGTACCATAAATTTGATTGTCTCTCCACAATATGAAACATCAGCTTCAC
AAATTGAAAGACTCCAAAACCAACTCAAACAACTAGAAGGTCAAAATCAA
CAAAGCATGGCTGATAATGCCAATGGTCAAAATGAGATTGCACGCCTCAA
CTCAGAAGTCAATAGAATGGGTGCAGAAAATGATAGATTTTCTGCCAATA
ACCAAAAACTCGAGGAAGAAAACAAGAAATTCGAGGAAAACAATAACCGT
TTAGAAGCATCTGTCAATAAATTGGAAGGAGAGAATAAGAAGTTTGAAGA
AAATAACAACCGCCTTGAATCCTCTGTCAACAAGTTAGAAGGCGAAAATC
AAAAGTTTGAAGAAAACAATAAGAAGCTTGAAGAAGAAAACAATAAATTT
CAGGAAAACAATGCCAAATTAGAAGCTGAAGTTAACCGCCTTGGAACTGA
AGTAAACCGTATGACCGAAGAGAATAACAAATTTGCTGAAAACAACAAGA
AACTTGAAGAAAATGTCGGACGCCTGGAAGGAGAAGTAGACAAAATGGGG
CAACTCAACAAAGAGTTTGAAGAAAACAATAATCAATTGAAGGAAAATGT
CAACAAACTTGAAGGAGAAGTCAACAAGATGACTGAAGAAAACAACAAAT
TCGCTGAAAACAACAAAGCTCTCGAAACACAAGTTAATGGACTTAAGGTA
AGGAGTTATATTTGAAATAAGTATGATTGCTAATTTGCTAGAAATAGGTA
TTCTTGAAAATGGCCTAAAAATGTTAATACATGTTAATTTATATCTGAAC
CCAATGTACTTCATTTAAAATAATTTAATAAGACATCATATAATATAGGC
TTAGACCCATGTGCGATGCAGAATTGTGTGTGCCTCGGAACAGGGTCCAA
TTTCCAAATTACCAAATTTAAAAAAAATGCTCTGACATGACATAATATAT
TTTGCTCTAAAATGATTGAATTTTGGTCACTAACAAGTGTCAAGAATTAA
ATTTCAAAAATAAATAAATATATTTGTATAATTTCTTGGAATTTTAGGAT
GAAGTTAACAAGATGAGTGAAGAGAACAACAAATTTTCTGCAAACAACGA
AAAATTGAGCCAAGAAGTTTCCAAAATGGGCGAGGAAAACAACAAGCTGG
CCGAAAATAATCAAAATTTGTCAGATGAGATCAATCGATTGAAAGCTGAA
ATTGACAGAATGGCTGCAGAAAATGCCAAATTTGCTGAAAACAACGAGAA
TCTTAAGAAAGAGGTAATTAGGTTAAGTCTGTGATGATTTTTGAACCATT
AGAAAAGATGTTCATTTTTCAATTTTTCTAAAATCTTTTTTCTTAATTAT
TGAGCTCCACCAGCGGGCCCTCAATTCACGCAATCACGCAATTATTTTTC
TAAATTCACGCATTCACGCAAATATTTCTAGAGTTTCACGCAATAACCTG
ATTTTCCAAAAAATTGGAAACATTGAAAAATTGGGAAAACTGCATACAAT
CGGTGGAAAAAAGGGAAAATTCACGTATTCACGCACAAAATAGCCCAGAT
TCACGCATTCACGCAATCAAAAATTGGATTTTCACGTTCACACAAGTTTT
TTCAATTCACGCATTCAAGCATTTCTTATTTCACTTATTCACGCAACCGA
AAATGCCCATTCGTGCATTCACGCAAACCGCTGGGGGGCCCATTATTATT
CTTAGAAATTTTCAATAATGTAAAGATTTTAATATAGCATTAATACATGC
TGAGAAATTGTCAAAAAAGTAAAGTGCCTATTCATGATATGCACCATTGC
ATTGTCTTCCACGGACCCAACAACTGATTGGCTGCAACTGACGTATTTAC
TGATTGATTTTACGTCGTTTACAACCAATCAGCTGTTAGATCCATGATGT
AATGTCAGAAGACATTGCAATGACCTATATCATGAATACACTTTAGAAAC
AGACAATTTTAAGAAGTGCTATGAAAAGGCTCCTTATTATTTACCAAGCA
GGGAGTAAGGGAAGGATTTTTTGTGCAACATAACTCGTTAAAGATTCATT
TAGAAGTTTTATCATGAGACAACCTGTAGTAAGTCTTTCTTGAAATTCAC
GTTGCAGGTTGACCGAATCACTGGCGAAAATGAGAAATTTGCAGAAAACA
ATAAGGTCTTACAAGAACAGAACACCGTATTCATTGAGAATAACAAACAA
CTAACCAACACTGTCACCGAACTCAAAGAACAAGCTGACAAATTCAGAGA
AATCTATCAAAAATTGTTAGCAGAAAATGAGAAGTTGGCAAGAATCAGAG
ATGGTCTACAAGAACAACTTGACGTAAGATATTTAGAATTTCTTTATAAG
GTAAGAGAGTCAAAGGATCTTAGATAAGAGCTTCATAGACTCTTAAGATT
TCGATCTAGATATTTTAAATGAAAATGCCTGAAATAATTTGGTGGAGTTG
NTTCGATCTAGATATTTTAAATGAAAATGCCTGAAATAATTTGGAATTGA
AGATTCTATTGTATTGGTGGAAGACCCGATTCATTCATTTATATGAATCT
TAGATATTACATCTTTTCCTCTTTAGATTTAAAAAGAAGTGTTTCTCAAA
CTTTGTACTTTTCTTAATCATTTCCAGGGTTTCGCGAAATTACAAGAGAT
GATTTTCAAACAATTGAATGAAAAAATGCGAGCTATGGATCGTTCATTGT
TGGAAAAAGTTGCTGCTGATATTGAAATGCTGGATCAAGATCAAGGTGAG
AAAAAACGCTTTTTCTTTTGAGAAGCTTAGTTACACTAATATATAAAGAG
TTTTCAAGGATTTTTTGTATTTTGCATACTACCACCTGGTGTTTTGACAG
AGCTACTCTTAACATTTCAGAAAATTTGTCTCTTCGGAACCATTTTTTTC
TCAAAAGTAGTAGTAATGAGTAGTCTGAATAAAAGACCTTTTTGGTATAG
TACTCTATGATACTAAAAGGATTTTCAAGTTTTTCGTGGGTTTATATGAT
GTTAGATTTCAGTTCCGACGGTTTTATTTATTGTCTCATTAGAGAATTTG
TGTCTGTTCTCCTGATTTTAACAATTTGTTATCTTTTGTATCCGTTGATA
AAACAAGAATTAACTTTCACTTTTATATCCAGGGCCAGGAGCACCTAAAA
TTATCTAATTTTGAAAATTTGCACAACTAATTTTGAGTGAATAATCTAAG
GGTTTATTTTTTCCTTGAGTCATTTTTTTTTGTTTTTGTAATTTGCAAGA
TCTAAAATGGGGCGTCTGGCTATCAACTGAAATTGAATGCGGTTTGCGAC
ATCGATAGCACATATAATATAACATATCTTTTTTGTTATTTTCAGGTCTT
TCTCAAGACGAATGGGGCAAATTCATGAAACGCGTTCCGACTCATCTCAA
AGAGAAGTTTGAAGGCATTAAGGATGACTTTACCTCATTCGACGAAAATA
AAGACAATGTGATTGATTCAGATGAATTCGGTAAAATGTTGGATGAAGTC
ATGAAGGAGACAGAGCCATCAGCAGCCAGCTCTGGTGATGAGCAACGTTA
GATTCTGGAAATCGAAACTATTCGTATTGATCATCTACTTGACAAGTGAC
TTTCCAGAAGGTAGACGATTTAAAAGACTTTGTTTTTAGAATATGGTTTT
GATATACTCAAATGAACTTCAGAATGTTCGATTGAGTTAAATATTCAACT
ATCAAAAGATGAAGTCTGTCATGTCAACGACGAAATGACTACTAATTGGA
TTTTGTTTAAATTCTGTTGAGACATGACAATTTTTAATGTGTTTAAGGTT
CAATAAATCTCCAATAAAAAAATGATATTTTTATTTTATTTTGAAAACTA
TGAAAGAGCTTTTCTATTACAGTATGAATAATATTTTGTCCGAAGCCTTC
TGTTAAATATAAATTTCTTTGTTAATATATTTCGTATCAAAGTTATCGTC
GTGGTGATTTTAAAATTCTGATTCGGCACCTAAATTATATACTCTAATCA
TTATGGACCTAATTTGGGGTTGGGGATTTGGGATGAGTCTTGTATGTATT
TAACTGTCATATTATTTTCATAGTCTTAGATTATTTTTGTACTACAATTC
TTATATTTTTGCTAAATATTTCTTACAATTTCTATATTTCTGTTTTATCC
ATATACATTCAAATTTTGATAAAAAATTTAAAATCATCTTCTTTTTTATA
AGTGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045178XLOC_045178Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072781-exon-scaffold_84-1575043694:24844..25029TCONS_00072781-exon-scaffold_84-1575043694:24844..25029Clytia hemisphaericaexon
TCONS_00072781-exon-scaffold_84-1575043694:20208..20403TCONS_00072781-exon-scaffold_84-1575043694:20208..20403Clytia hemisphaericaexon
TCONS_00072781-exon-scaffold_84-1575043694:19626..20009TCONS_00072781-exon-scaffold_84-1575043694:19626..20009Clytia hemisphaericaexon
TCONS_00072781-exon-scaffold_84-1575043694:18683..19405TCONS_00072781-exon-scaffold_84-1575043694:18683..19405Clytia hemisphaericaexon
TCONS_00072781-exon-scaffold_84-1575043694:18117..18332TCONS_00072781-exon-scaffold_84-1575043694:18117..18332Clytia hemisphaericaexon
TCONS_00072781-exon-scaffold_84-1575043694:17057..17272TCONS_00072781-exon-scaffold_84-1575043694:17057..17272Clytia hemisphaericaexon
TCONS_00072781-exon-scaffold_84-1575043694:16635..16752TCONS_00072781-exon-scaffold_84-1575043694:16635..16752Clytia hemisphaericaexon
TCONS_00072781-exon-scaffold_84-1575043694:15174..16034TCONS_00072781-exon-scaffold_84-1575043694:15174..16034Clytia hemisphaericaexon
TCONS_00072781-exon-scaffold_84-1510915933:24844..25029TCONS_00072781-exon-scaffold_84-1510915933:24844..25029Clytia hemisphaericaexon
TCONS_00072781-exon-scaffold_84-1510915933:20208..20403TCONS_00072781-exon-scaffold_84-1510915933:20208..20403Clytia hemisphaericaexon
TCONS_00072781-exon-scaffold_84-1510915933:19626..20009TCONS_00072781-exon-scaffold_84-1510915933:19626..20009Clytia hemisphaericaexon
TCONS_00072781-exon-scaffold_84-1510915933:18683..19405TCONS_00072781-exon-scaffold_84-1510915933:18683..19405Clytia hemisphaericaexon
TCONS_00072781-exon-scaffold_84-1510915933:18117..18332TCONS_00072781-exon-scaffold_84-1510915933:18117..18332Clytia hemisphaericaexon
TCONS_00072781-exon-scaffold_84-1510915933:17057..17272TCONS_00072781-exon-scaffold_84-1510915933:17057..17272Clytia hemisphaericaexon
TCONS_00072781-exon-scaffold_84-1510915933:16635..16752TCONS_00072781-exon-scaffold_84-1510915933:16635..16752Clytia hemisphaericaexon
TCONS_00072781-exon-scaffold_84-1510915933:15174..16034TCONS_00072781-exon-scaffold_84-1510915933:15174..16034Clytia hemisphaericaexon
TCONS_00072781-exon-scaffold_84-1491911889:24844..25029TCONS_00072781-exon-scaffold_84-1491911889:24844..25029Clytia hemisphaericaexon
TCONS_00072781-exon-scaffold_84-1491911889:20208..20403TCONS_00072781-exon-scaffold_84-1491911889:20208..20403Clytia hemisphaericaexon
TCONS_00072781-exon-scaffold_84-1491911889:19626..20009TCONS_00072781-exon-scaffold_84-1491911889:19626..20009Clytia hemisphaericaexon
TCONS_00072781-exon-scaffold_84-1491911889:18683..19405TCONS_00072781-exon-scaffold_84-1491911889:18683..19405Clytia hemisphaericaexon
TCONS_00072781-exon-scaffold_84-1491911889:18117..18332TCONS_00072781-exon-scaffold_84-1491911889:18117..18332Clytia hemisphaericaexon
TCONS_00072781-exon-scaffold_84-1491911889:17057..17272TCONS_00072781-exon-scaffold_84-1491911889:17057..17272Clytia hemisphaericaexon
TCONS_00072781-exon-scaffold_84-1491911889:16635..16752TCONS_00072781-exon-scaffold_84-1491911889:16635..16752Clytia hemisphaericaexon
TCONS_00072781-exon-scaffold_84-1491911889:15174..16034TCONS_00072781-exon-scaffold_84-1491911889:15174..16034Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_84supercontigscaffold_84:15174..25029 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.80822	7.05172	12.3924	17.2702	3.19476	0.645763	0.00113658	1.41192e-05	11.8141	5.27442	9.54664	8.02541	23.7128	25.3155	29.7979	34.5994	0.854122	13.4496	6.20682	12.6945	10.8696	10.3148	7.5692	8.03039	1.07745e-05	2.88535e-07	24.4837	9.05771	5.22821	3.99062
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072781 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top