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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072756 ID=TCONS_00072756|Name=TCONS_00072756|organism=Clytia hemisphaerica|type=transcript|length=1093bp
CAATATGTATATTTTAAAGACAAAGGCAAATTTTTGTAAGGTTTAGATTG
TAATTGATCACATGTTTCAATCTGTAAACAAGAGATTTAATTTGATGACT
GGAATTTTGAGTAAAACAAAGGAAATAAAGTGAGTAAAAAGTATGGCAGA
AAAGTGCAATATATCACCCTTCGATGGTATTGAATAGATATGAACGTGGA
GCAATCTTTGatcgaaaacaaaaagaaatccaaaatatttgtttacctCA
ACCAAAAAGAGCAATAGACCGATATCTGGTCTGACATGAAACATGAATAC
CAATATCTCAATCTAAAAAATGAGAGTTTTATGTAATTTAAATTTACACA
AGAATGATTTAATAATTTATTATAGTATCCAATCTTAAATTTaaccacaa
aaaatattttgtccaagAAACCTTAACTTTTCTAAGACGATGTCATAGAA
TCCCGAAAGCTCTATTCAATCTTAAAGATTAATTAAAAATCTCTAAGATT
AATATTAACCTCCtttaaaaacataactttttaatGGAACTAATCATAAA
CCAATTTTTTAGAAtatgaaaaatcaaactttgttggTCGATAAATTTCT
ATTAAGTTTTGTTGTCAAACTAATAGAACTAAAGAACTGAAGAAAAAATC
TGCATGATGTGCAGACTTATGGCCACTACTCAAAGCTCTAAAGTCTCTGC
ACACTAATTTACTGGTCGAACTTTGTGGAACTATATTATTTGTCAGGTTT
GCTGAACTTTCTCTGTTGTCATACTTTGCAGAAGTTCCTTGAATTTTAAT
CTTGGATTTTTTAAGACAGTCTGGATTACATGATATGACATGAGATTGAT
AATTGATGATTAAATTATTTGcattcagattttaaaaatcagcaatgatc
tatctatctatctatctatgtTTTAAGTATCAAAAGGTCCTAAGCCCCAT
TATCCATACATACAAATTATAagattgtataaaaataaaaagtaaataac
atatgtaaatttttttccACTAACAGAGGACACAAAGAAATAGCTTGAGA
AGGCTAAATTAGAGAAATGGCTAGAGTAGGCTGAATTAGAGTA Run BLAST on NCBI transcript from alignment at scaffold_83:5347..6439 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072756 ID=TCONS_00072756|Name=TCONS_00072756|organism=Clytia hemisphaerica|type=transcript|length=1093bp|location=Sequence derived from alignment at scaffold_83:5347..6439 (Clytia hemisphaerica)
TACTCTAATTCAGCCTACTCTAGCCATTTCTCTAATTTAGCCTTCTCAAG
CTATTTCTTTGTGTCCTCTGTTAGTggaaaaaaatttacatatgttattt
actttttatttttatacaatctTATAATTTGTATGTATGGATAATGGGGC
TTAGGACCTTTTGATACTTAAAacatagatagatagatagatagatcatt
gctgatttttaaaatctgaatgCAAATAATTTAATCATCAATTATCAATC
TCATGTCATATCATGTAATCCAGACTGTCTTAAAAAATCCAAGATTAAAA
TTCAAGGAACTTCTGCAAAGTATGACAACAGAGAAAGTTCAGCAAACCTG
ACAAATAATATAGTTCCACAAAGTTCGACCAGTAAATTAGTGTGCAGAGA
CTTTAGAGCTTTGAGTAGTGGCCATAAGTCTGCACATCATGCAGATTTTT
TCTTCAGTTCTTTAGTTCTATTAGTTTGACAACAAAACTTAATAGAAATT
TATCGAccaacaaagtttgatttttcataTTCTAAAAAATTGGTTTATGA
TTAGTTCCattaaaaagttatgtttttaaaGGAGGTTAATATTAATCTTA
GAGATTTTTAATTAATCTTTAAGATTGAATAGAGCTTTCGGGATTCTATG
ACATCGTCTTAGAAAAGTTAAGGTTTcttggacaaaatattttttgtggt
tAAATTTAAGATTGGATACTATAATAAATTATTAAATCATTCTTGTGTAA
ATTTAAATTACATAAAACTCTCATTTTTTAGATTGAGATATTGGTATTCA
TGTTTCATGTCAGACCAGATATCGGTCTATTGCTCTTTTTGGTTGaggta
aacaaatattttggatttctttttgttttcgatCAAAGATTGCTCCACGT
TCATATCTATTCAATACCATCGAAGGGTGATATATTGCACTTTTCTGCCA
TACTTTTTACTCACTTTATTTCCTTTGTTTTACTCAAAATTCCAGTCATC
AAATTAAATCTCTTGTTTACAGATTGAAACATGTGATCAATTACAATCTA
AACCTTACAAAAATTTGCCTTTGTCTTTAAAATATACATATTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072756-exon-scaffold_83-1491911889:5347..6439 | TCONS_00072756-exon-scaffold_83-1491911889:5347..6439 | Clytia hemisphaerica | exon |
| TCONS_00072756-exon-scaffold_83-1510915933:5347..6439 | TCONS_00072756-exon-scaffold_83-1510915933:5347..6439 | Clytia hemisphaerica | exon |
| TCONS_00072756-exon-scaffold_83-1575043694:5347..6439 | TCONS_00072756-exon-scaffold_83-1575043694:5347..6439 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_83 | supercontig | scaffold_83:5347..6439 . |
Blast
The following BLAST results are available for this feature:
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