TCONS_00072689 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072689
Unique NameTCONS_00072689
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2581

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072689 ID=TCONS_00072689|Name=TCONS_00072689|organism=Clytia hemisphaerica|type=transcript|length=2581bp
ATAACAACAAAGAGAATCTCCATTCTTGCTTAGAAAGAATCGTAGTATCA
TGGcaaccaaaaagaaaaacgacTTTAACCACGTGTGGAACTTGTGTTTT
GATATGAAAGTGTTACATGCTCATCCATTCCCACTAAAAAAATATGTAAG
TTTGATTTTATCTTTTACATCAAGCTTAAAGATATCAGTAATGGAGCAAA
AAGAAACGATAAAAACAAGGCAATTCATATCTTCAGTAACATACACCATA
TTTGCATTGGTTTTATTGCGTTTATTATTGTTGCTGAATAACGACAGCTT
GATTATAAACATCAGAGGTTTCGATGAACCCAAAGAAATCCAAATCATAC
ACATCGAGAAGCGTCTAAACGCAATAACCAAGACGTATacgaaagaaaaa
tatgatttgAACACTTTGCAATTTCAAATGCAAAGTCTTTGCAACCAGGA
TACGTTGAATGATCCTTGCTTGAAAGTTTTACCCTGGAAACTTCGTCATA
AGCGGAGTGTTAACACTACAAGTGTAGATCAAAGTATTGTCAAACTTCTT
GTGCGTCCTTTAGGATATCCGAGCTTCGTTCAAATTATCTCCCTAAACAC
ACTCGGTGAGACGCAAACAACTGGAGGTGATTATTGGGATGTCAAACTTT
GCGGAGATAAAAACACAACtctaaatattgaaatgatagACCATGACGAC
GGCTCTTACACAGGCTTTTTCTACCTACCAGAGGATCTGATGATATCAAG
TAGtaaatttgaattgaaatatttgctgGAATACAGTCAATGTAACGGAT
TGAGAGACATGCCGGAAAATTGGTTCAAAACAGGGACGAttcaaggaaaa
tttcaacGAGATGGTTCAATTGGAGACCATGATGATTTTCTCCATCAATT
ACAAACcacaaaactattgttccataTACCACGTGATCAAAATGAATTCA
ACTCATTggtgcaaaattttgaaatttcccaaaAGAGTCAAAAGCCTTTC
AATAAATATTGTGGATTTTGGCATGATGGCTTGTTCAGGGAATTTCATCA
AAAAGATGTTGCTAATACAGAGCCTCGTTTGAATGTCCATGcacctcctt
ttcaaacattaaaAATATTTGGAGATTCGATGGGACGACACTTCCACGAA
TCAATAGTTGCAAATCATTCTCTATGTAAAAACTTGTTCAAGAAATGCGA
TTTATCTTACACGTGGGTTTACAAAATGTACAATCGAACCAAAGACTTCC
ATGATGGCGTTCATATTTACGACGATAAAGactttaaccagactcattat
CTGGAAGACATTCGTAGAGATTTATACTCCAAAAACATGAGACATGACAA
AAGTGTTTATTTGGTCAACTTTGGCGTCCATACTATTATGACTTTACCAC
TAAACAAGCTACGTGAACTTTTACAAGCATTCTTTGATCTGATCTCGAAT
ATGAAAAAGAGGTTGGAACCGAGAGAAATACCCCTCATTATCTGGAAATC
AACAACTTATCCCATCTTAGAGAATTTCAAGCCGAGTACAACAACTCAAT
TACGATTCTTAACAAAGCAGaGAGTGAGGTATTGGAATTCGTACTCCCTC
CAAATGATGAAAAGACGGCACATTCCGATCCTTGACGTCACTACCATGGC
AACATCGTATCCATGGGGTCCATATGACATCATGCATTATAACAACCTCG
TTTTCAGACAAGCTGAAGATGATTTAGAAACTTTTATAATTGAGAAGTTA
AGTTCAAAGGACATGTTGAAAAGTAAATGGATGAGTTTCGTTCATTAGTA
TACAGAGTGTTACAAACGTTGGGGAGTATGATCAATTCTTTCCCTCTGTA
GCTTTTAGCAATTTCTTTAGACAAATcattactgaggttaagcataccag
gataatcacgacgacggacgaaaaatgtaataggctagtgaaaatacgaa
gtttgattggtcgaaactcactagcctgttaaattttcgttcgtcgtcct
GATTTTgtcgatttacttaacctcactactatctaagaaataagcccaaa
gctgaagaaaatttgcaaacgggctttttgccaaaaagagtttacagccg
gtagagtttgccttcgaaactctcccgccgatttttttctgtCTACCGCC
ATACCActatattttcccgcctttactatcactgtaatgGACGATAACAT
CATCTACAATTTCTTATGCATGATTATTGGAACCCTGGGCAATTAAGTGA
ATGTTTTCGATAGCTCATAAAGTATTTCGCGGtcaattaaaacaaaagaa
aagcaGTTTCAAGGGATTATCAGTACTAATTTTTACGTTGGTTTTTCGGT
AtttcttttatcaatttttctttataaccGTTTTGGGTGTGACCTGGTCG
GAAGGGGGCCTACTACAACATTAAAAAAGTAtctgtttatttatttgtat
actttttttctctgaatttgATGTAACTAGGTCAATATTTTCAGACAATT
TTTAATAAGATACTAAGATTCGATTCTAGTTCAACCGCATCAAATTAATA
TTGATGTAATTGTCATTTTTCAGCATCAAAG
Run BLAST on NCBI

protein sequence of TCONS_00072689-protein

>TCONS_00072689-protein ID=TCONS_00072689-protein|Name=TCONS_00072689-protein|organism=Clytia hemisphaerica|type=polypeptide|length=582bp
MATKKKNDFNHVWNLCFDMKVLHAHPFPLKKYVSLILSFTSSLKISVMEQ
KETIKTRQFISSVTYTIFALVLLRLLLLLNNDSLIINIRGFDEPKEIQII
HIEKRLNAITKTYTKEKYDLNTLQFQMQSLCNQDTLNDPCLKVLPWKLRH
KRSVNTTSVDQSIVKLLVRPLGYPSFVQIISLNTLGETQTTGGDYWDVKL
CGDKNTTLNIEMIDHDDGSYTGFFYLPEDLMISSSKFELKYLLEYSQCNG
LRDMPENWFKTGTIQGKFQRDGSIGDHDDFLHQLQTTKLLFHIPRDQNEF
NSLVQNFEISQKSQKPFNKYCGFWHDGLFREFHQKDVANTEPRLNVHAPP
FQTLKIFGDSMGRHFHESIVANHSLCKNLFKKCDLSYTWVYKMYNRTKDF
HDGVHIYDDKDFNQTHYLEDIRRDLYSKNMRHDKSVYLVNFGVHTIMTLP
LNKLRELLQAFFDLISNMKKRLEPREIPLIIWKSTTYPILENFKPSTTTQ
LRFLTKQRVRYWNSYSLQMMKRRHIPILDVTTMATSYPWGPYDIMHYNNL
VFRQAEDDLETFIIEKLSSKDMLKSKWMSFVH
Run BLAST on NCBI

transcript from alignment at scaffold_82:247178..251505+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072689 ID=TCONS_00072689|Name=TCONS_00072689|organism=Clytia hemisphaerica|type=transcript|length=4328bp|location=Sequence derived from alignment at scaffold_82:247178..251505+ (Clytia hemisphaerica)
ATAACAACAAAGAGAATCTCCATTCTTGCTTAGAAAGAATCGTAGTATCA TGGcaaccaaaaagaaaaacgacTTTAACCACGTGTGGAACTTGTGTTTT GATATGAAAGTGTTACATGCTCATCCATTCCCACTAAAAAAATATGTAAG TTTGATTTTATCTTTTACATCAAGGTAagtaattttggcgggaactttaC TTTGGCTATTTTCTTTTACCTTTTACCTTTTACCAACCTTATATTAACGA TGTTATATTTACTATAGGgatacaaactttcgcgagcagaaactttggCG ATTTTAGCCGTTATTGCGAAagtaaatatctttgaaaattcttggaaggg ccattcgcgaaagtttatcctcgcaaaaaattcttaacaaaatagaaaat ctgtgaaacttcaaattttgaataaattgtAAGATTTATATGACACTTTT TAGCTTGTTAAACCTCAGAATTTCAATCCAATTCAAAGTCAGAATTTCAA TCCAATTcgagaagtatttgtccctctaagccattttttcatgtcatgtg aaaattttcatttttatgtctttatttttaagtcgGGTGAAAGTTTATGT Tgcaaatttcgcgaattttcgacctcgcgaaagtttgtacgcctaaagta aggAACGTCCAGCCACCAtgcaaatatttcatttttaagattaGGTGAAA CAAAAATAACATAACGATACACCTGCGTGTGTAATCCTAAACCACCCAAC GAAGGATAGGAGACTTTCTACAATTAGAATCACTCTGCGATTCGAAGGAA TTAGATTCTCTGTTTTTGAGTGTGAATTAGTATACAACAACGAATCTTGA TATAATCTTGTCATCTTCTGTATTCTTTCAACAATTTTAGCTTAAAGATA TCAGTAATGGAGCAAAAAGAAACGATAAAAACAAGGCAATTCATATCTTC AGTAACATACACCATATTTGCATTGGTTTTATTGCGTTTATTATTGTTGC TGAATAACGACAGCTTGATTATAAACATCAGAGGTTTCGATGAACCCAAA GAAATCCAAATCATACACATCGAGAAGCGTCTAAACGCAATAACCAAGAC GTATacgaaagaaaaatatgatttgAACACTTTGCAATTTCAAATGCAAA GTCTTTGCAACCAGGATACGTTGAATGATCCTTGCTTGAAAGTTTTACCC TGGAAACTTCGTCATAAGCGGAGTGTTAACACTACAAGTGTAGATCAAAG TATTGTCAAACTTCTTGTGCGTCCTTTAGGATATCCGAGCTTCGTTCAAA TTATCTCCCTAAACACACTCGGTGAGACGCAAACAACTGGAGGTGATTAT TGGGATGTCAAACTTTGCGGAGATAAAAACACAACtctaaatattgaaat gatagACCATGACGACGGCTCTTACACAGGCTTTTTCTACCTACCAGAGG ATCTGATGATATCAAGTAGtaaatttgaattgaaatatttgctgGAATAC AGTCAATGTAACGGATTGAGAGACATGCCGGAAAATTGGTTCAAAACAGG TAATTTCTAATTCGTGAGGTACAATTTGTTCTTCCCTAATAATAAGATTT TTCATGACAAAAGACCAGCACTcttgtttttgatgaaatttagtAGTACT GATAACTTTCCTTAAAATAAAAACCTTGAATTTCACTTTGATTCATGGCA CATTTNGAACTTTCCTTAAATTAAAAACCTTGAATTTCACTTTGATTCAT GGCACATTTggcaaatatttttcattttaatctCTCATTTTCAAAAGGGA CGAttcaaggaaaatttcaacGAGATGGTTCAATTGGAGACCATGATGAT TTTCTCCATCAATTACAAACcacaaaactattgttccataTACCACGTGA TCAAAATGAATTCAACTCATTggtgcaaaattttgaaatttcccaaaAGA GTCAAAAGCCTTTCAATAAATATTGTGGATTTTGGCATGATGGCTTGTTC AGGGAATTTCATCAAAAAGATGTTGCTAATACAGAGCCTCGTTTGAATGT CCATGcacctccttttcaaacattaaaAATATTTGGAGATTCGATGGGAC GACACTTCCACGAATCAATAGTTGCAAATCATTCTCTATGTAAAAACTTG TTCAAGAAATGCGATTTATCTTACACGTGGGTTTACAAAATGTACAATCG AACCAAAGACTTCCATGATGGCGTTCATATTTACGACGATAAAGacttta accagactcattatCTGGAAGACATTCGTAGAGATTTATACTCCAAAAAC ATGAGACATGACAAAAGTGTTTATTTGGTCAACTTTGGCGTCCATACTAT TATGACTTTACCACTAAACAAGCTACGTGAACTTTTACAAGCATTCTTTG ATCTGATCTCGAATATGAAAAAGAGGTTGGAACCGAGAGAAATACCCCTC ATTATCTGGAAATCAACAACTTATCCCATCTTAGAGAATTTCAAGCCGAG TACAACAACTCAATTACGATTCTTAACAAAGCAGGTTAGTGGATAAGTTC AGGTTAtacagaaaattaaaaaagctcCATTCCCCAAAATTCCCAcgttt taagggctctggtcatagtgaaaaatcaatttgaagataaaaccttatgt tttcgcttctttgacatgtttaagaacaaactgcttttgaaaaaatgaat ttaagtaatcacatcatgagtaattaaggaataagtgtgacatggacctt aataaaacgtcataacgacgccATTCATATACTTTCCACACAAAAGCCTA ATCTCTTTGGGGAAATCagtttattgtttcaaactttttttaagttaatg accaataatttctttatttaggatttttcgaaaaaatttctatttggcta catcccaagttatagctgttttcgtatggaaatttagtggagaaaattgc caaaaataaggttttttggagattttaaagaaaaagatacTGTTATACAT TagtctttttaaaatgcagtaATTgacatttaagttggtgtaaaatcgaa aaattgggtattaccagagcccttaatttcGAAATAGACCATTACTTGTT CGTTAATTTTGCATTGGTCTCCTAAACTGGTTTCTAGTTCTCAGACAGAG GCTTGGATGCCTTAACCCTATGGGCACGCAACGTCTTATGGACATTCAAT GGATGGCTTTAAGACCtttggacgtcctagaaacgtacattagacatcca aaagacgtttgtgcCCATTGGGAACATTATATCATCTTatgttgttttca tttttatttcatttcagaGAGTGAGGTATTGGAATTCGTACTCCCTCCAA ATGATGAAAAGACGGCACATTCCGATCCTTGACGTCACTACCATGGCAAC ATCGTATCCATGGGGTCCATATGACATCATGCATTATAACAACCTCGTTT TCAGACAAGCTGAAGATGATTTAGAAACTTTTATAATTGAGAAGTTAAGT TCAAAGGACATGTTGAAAAGTAAATGGATGAGTTTCGTTCATTAGTATAC AGAGTGTTACAAACGTTGGGGAGTATGATCAATTCTTTCCCTCTGTAGCT TTTAGCAATTTCTTTAGACAAATcattactgaggttaagcataccaggat aatcacgacgacggacgaaaaatgtaataggctagtgaaaatacgaagtt tgattggtcgaaactcactagcctgttaaattttcgttcgtcgtcctGAT TTTgtcgatttacttaacctcactactatctaagaaataagcccaaagct gaagaaaatttgcaaacgggctttttgccaaaaagagtttacagccggta gagtttgccttcgaaactctcccgccgatttttttctgtCTACCGCCATA CCActatattttcccgcctttactatcactgtaatgGACGATAACATCAT CTACAATTTCTTATGCATGATTATTGGAACCCTGGGCAATTAAGTGAATG TTTTCGATAGCTCATAAAGTATTTCGCGGtcaattaaaacaaaagaaaag caGTTTCAAGGGATTATCAGTACTAATTTTTACGTTGGTTTTTCGGTAtt tcttttatcaatttttctttataaccGTTTTGGGTGTGACCTGGTCGGAA GGGGGCCTACTACAACATTAAAAAAGTAtctgtttatttatttgtatact ttttttctctgaatttgATGTAACTAGGTCAATATTTTCAGACAATTTTT AATAAGATACTAAGATTCGATTCTAGTTCAACCGCATCAAATTAATATTG ATGTAATTGTCATTTTTCAGCATCAAAG

Coding sequence (CDS) from alignment at scaffold_82:247178..251505+

>TCONS_00072689 ID=TCONS_00072689|Name=TCONS_00072689|organism=Clytia hemisphaerica|type=CDS|length=6996bp|location=Sequence derived from alignment at scaffold_82:247178..251505+ (Clytia hemisphaerica)
ATGGcaaccaaaaagaaaaacgacTTTAACCACGTGTGGAACTTGTGTTT
TGATATGAAAGTGTTACATGCTCATCCATTCCCACTAAAAAAATATGTAA
GTTTGATTTTATCTTTTACATCAAGCTTAAAGATATCAGTAATGGAGCAA
AAAGAAACGATAAAAACAAGGCAATTCATATCTTCAGTAACATACACCAT
ATTTGCATTGGTTTTATTGCGTTTATTATTGTTGCTGAATAACGACAGCT
TGATTATAAACATCAGAGGTTTCGATGAACCCAAAGAAATCCAAATCATA
CACATCGAGAAGCGTCTAAACGCAATAACCAAGACGTATacgaaagaaaa
atatgatttgAACACTTTGCAATTTCAAATGCAAAGTCTTTGCAACCAGG
ATACGTTGAATGATCCTTGCTTGAAAGTTTTACCCTGGAAACTTCGTCAT
AAGCGGAGTGTTAACACTACAAGTGTAGATCAAAGTATTGTCAAACTTCT
TGTGCGTCCTTTAGGATATCCGAGCTTCGTTCAAATTATCTCCCTAAACA
CACTCGGTGAGACGCAAACAACTGGAGGTGATTATTGGGATGTCAAACTT
TGCGGAGATAAAAACACAACtctaaatattgaaatgatagACCATGACGA
CGGCTCTTACACAGGCTTTTTCTACCTACCAGAGGATCTGATGATATCAA
GTAGtaaatttgaattgaaatatttgctgGAATACAGTCAATGTAACGGA
TTGAGAGACATGCCGGAAAATTGGTTCAAAACAGGGACGAttcaaggaaa
atttcaacGAGATGGTTCAATTGGAGACCATGATGATTTTCTCCATCAAT
TACAAACcacaaaactattgttccataTACCACGTGATCAAAATGAATTC
AACTCATTggtgcaaaattttgaaatttcccaaaAGAGTCAAAAGCCTTT
CAATAAATATTGTGGATTTTGGCATGATGGCTTGTTCAGGGAATTTCATC
AAAAAGATGTTGCTAATACAGAGCCTCGTTTGAATGTCCATGcacctcct
tttcaaacattaaaAATATTTGGAGATTCGATGGGACGACACTTCCACGA
ATCAATAGTTGCAAATCATTCTCTATGTAAAAACTTGTTCAAGAAATGCG
ATTTATCTTACACGTGGGTTTACAAAATGTACAATCGAACCAAAGACTTC
CATGATGGCGTTCATATTTACGACGATAAAGactttaaccagactcatta
tCTGGAAGACATTCGTAGAGATTTATACTCCAAAAACATGAGACATGACA
AAAGTGTTTATTTGGTCAACTTTGGCGTCCATACTATTATGACTTTACCA
CTAAACAAGCTACGTGAACTTTTACAAGCATTCTTTGATCTGATCTCGAA
TATGAAAAAGAGGTTGGAACCGAGAGAAATACCCCTCATTATCTGGAAAT
CAACAACTTATCCCATCTTAGAGAATTTCAAGCCGAGTACAACAACTCAA
TTACGATTCTTAACAAAGCAGaGAGTGAGGTATTGGAATTCGTACTCCCT
CCAAATGATGAAAAGACGGCACATTCCGATCCTTGACGTCACTACCATGG
CAACATCGTATCCATGGGGTCCATATGACATCATGCATTATAACAACCTC
GTTTTCAGACAAGCTGAAGATGATTTAGAAACTTTTATAATTGAGAAGTT
AAGTTCAAAGGACATGTTGAAAAGTAAATGGATGAGTTTCGTTCATTAGA
TGGcaaccaaaaagaaaaacgacTTTAACCACGTGTGGAACTTGTGTTTT
GATATGAAAGTGTTACATGCTCATCCATTCCCACTAAAAAAATATGTAAG
TTTGATTTTATCTTTTACATCAAGCTTAAAGATATCAGTAATGGAGCAAA
AAGAAACGATAAAAACAAGGCAATTCATATCTTCAGTAACATACACCATA
TTTGCATTGGTTTTATTGCGTTTATTATTGTTGCTGAATAACGACAGCTT
GATTATAAACATCAGAGGTTTCGATGAACCCAAAGAAATCCAAATCATAC
ACATCGAGAAGCGTCTAAACGCAATAACCAAGACGTATacgaaagaaaaa
tatgatttgAACACTTTGCAATTTCAAATGCAAAGTCTTTGCAACCAGGA
TACGTTGAATGATCCTTGCTTGAAAGTTTTACCCTGGAAACTTCGTCATA
AGCGGAGTGTTAACACTACAAGTGTAGATCAAAGTATTGTCAAACTTCTT
GTGCGTCCTTTAGGATATCCGAGCTTCGTTCAAATTATCTCCCTAAACAC
ACTCGGTGAGACGCAAACAACTGGAGGTGATTATTGGGATGTCAAACTTT
GCGGAGATAAAAACACAACtctaaatattgaaatgatagACCATGACGAC
GGCTCTTACACAGGCTTTTTCTACCTACCAGAGGATCTGATGATATCAAG
TAGtaaatttgaattgaaatatttgctgGAATACAGTCAATGTAACGGAT
TGAGAGACATGCCGGAAAATTGGTTCAAAACAGGGACGAttcaaggaaaa
tttcaacGAGATGGTTCAATTGGAGACCATGATGATTTTCTCCATCAATT
ACAAACcacaaaactattgttccataTACCACGTGATCAAAATGAATTCA
ACTCATTggtgcaaaattttgaaatttcccaaaAGAGTCAAAAGCCTTTC
AATAAATATTGTGGATTTTGGCATGATGGCTTGTTCAGGGAATTTCATCA
AAAAGATGTTGCTAATACAGAGCCTCGTTTGAATGTCCATGcacctcctt
ttcaaacattaaaAATATTTGGAGATTCGATGGGACGACACTTCCACGAA
TCAATAGTTGCAAATCATTCTCTATGTAAAAACTTGTTCAAGAAATGCGA
TTTATCTTACACGTGGGTTTACAAAATGTACAATCGAACCAAAGACTTCC
ATGATGGCGTTCATATTTACGACGATAAAGactttaaccagactcattat
CTGGAAGACATTCGTAGAGATTTATACTCCAAAAACATGAGACATGACAA
AAGTGTTTATTTGGTCAACTTTGGCGTCCATACTATTATGACTTTACCAC
TAAACAAGCTACGTGAACTTTTACAAGCATTCTTTGATCTGATCTCGAAT
ATGAAAAAGAGGTTGGAACCGAGAGAAATACCCCTCATTATCTGGAAATC
AACAACTTATCCCATCTTAGAGAATTTCAAGCCGAGTACAACAACTCAAT
TACGATTCTTAACAAAGCAGaGAGTGAGGTATTGGAATTCGTACTCCCTC
CAAATGATGAAAAGACGGCACATTCCGATCCTTGACGTCACTACCATGGC
AACATCGTATCCATGGGGTCCATATGACATCATGCATTATAACAACCTCG
TTTTCAGACAAGCTGAAGATGATTTAGAAACTTTTATAATTGAGAAGTTA
AGTTCAAAGGACATGTTGAAAAGTAAATGGATGAGTTTCGTTCATTAGAT
GGcaaccaaaaagaaaaacgacTTTAACCACGTGTGGAACTTGTGTTTTG
ATATGAAAGTGTTACATGCTCATCCATTCCCACTAAAAAAATATGTAAGT
TTGATTTTATCTTTTACATCAAGCTTAAAGATATCAGTAATGGAGCAAAA
AGAAACGATAAAAACAAGGCAATTCATATCTTCAGTAACATACACCATAT
TTGCATTGGTTTTATTGCGTTTATTATTGTTGCTGAATAACGACAGCTTG
ATTATAAACATCAGAGGTTTCGATGAACCCAAAGAAATCCAAATCATACA
CATCGAGAAGCGTCTAAACGCAATAACCAAGACGTATacgaaagaaaaat
atgatttgAACACTTTGCAATTTCAAATGCAAAGTCTTTGCAACCAGGAT
ACGTTGAATGATCCTTGCTTGAAAGTTTTACCCTGGAAACTTCGTCATAA
GCGGAGTGTTAACACTACAAGTGTAGATCAAAGTATTGTCAAACTTCTTG
TGCGTCCTTTAGGATATCCGAGCTTCGTTCAAATTATCTCCCTAAACACA
CTCGGTGAGACGCAAACAACTGGAGGTGATTATTGGGATGTCAAACTTTG
CGGAGATAAAAACACAACtctaaatattgaaatgatagACCATGACGACG
GCTCTTACACAGGCTTTTTCTACCTACCAGAGGATCTGATGATATCAAGT
AGtaaatttgaattgaaatatttgctgGAATACAGTCAATGTAACGGATT
GAGAGACATGCCGGAAAATTGGTTCAAAACAGGGACGAttcaaggaaaat
ttcaacGAGATGGTTCAATTGGAGACCATGATGATTTTCTCCATCAATTA
CAAACcacaaaactattgttccataTACCACGTGATCAAAATGAATTCAA
CTCATTggtgcaaaattttgaaatttcccaaaAGAGTCAAAAGCCTTTCA
ATAAATATTGTGGATTTTGGCATGATGGCTTGTTCAGGGAATTTCATCAA
AAAGATGTTGCTAATACAGAGCCTCGTTTGAATGTCCATGcacctccttt
tcaaacattaaaAATATTTGGAGATTCGATGGGACGACACTTCCACGAAT
CAATAGTTGCAAATCATTCTCTATGTAAAAACTTGTTCAAGAAATGCGAT
TTATCTTACACGTGGGTTTACAAAATGTACAATCGAACCAAAGACTTCCA
TGATGGCGTTCATATTTACGACGATAAAGactttaaccagactcattatC
TGGAAGACATTCGTAGAGATTTATACTCCAAAAACATGAGACATGACAAA
AGTGTTTATTTGGTCAACTTTGGCGTCCATACTATTATGACTTTACCACT
AAACAAGCTACGTGAACTTTTACAAGCATTCTTTGATCTGATCTCGAATA
TGAAAAAGAGGTTGGAACCGAGAGAAATACCCCTCATTATCTGGAAATCA
ACAACTTATCCCATCTTAGAGAATTTCAAGCCGAGTACAACAACTCAATT
ACGATTCTTAACAAAGCAGaGAGTGAGGTATTGGAATTCGTACTCCCTCC
AAATGATGAAAAGACGGCACATTCCGATCCTTGACGTCACTACCATGGCA
ACATCGTATCCATGGGGTCCATATGACATCATGCATTATAACAACCTCGT
TTTCAGACAAGCTGAAGATGATTTAGAAACTTTTATAATTGAGAAGTTAA
GTTCAAAGGACATGTTGAAAAGTAAATGGATGAGTTTCGTTCATTAGATG
GcaaccaaaaagaaaaacgacTTTAACCACGTGTGGAACTTGTGTTTTGA
TATGAAAGTGTTACATGCTCATCCATTCCCACTAAAAAAATATGTAAGTT
TGATTTTATCTTTTACATCAAGCTTAAAGATATCAGTAATGGAGCAAAAA
GAAACGATAAAAACAAGGCAATTCATATCTTCAGTAACATACACCATATT
TGCATTGGTTTTATTGCGTTTATTATTGTTGCTGAATAACGACAGCTTGA
TTATAAACATCAGAGGTTTCGATGAACCCAAAGAAATCCAAATCATACAC
ATCGAGAAGCGTCTAAACGCAATAACCAAGACGTATacgaaagaaaaata
tgatttgAACACTTTGCAATTTCAAATGCAAAGTCTTTGCAACCAGGATA
CGTTGAATGATCCTTGCTTGAAAGTTTTACCCTGGAAACTTCGTCATAAG
CGGAGTGTTAACACTACAAGTGTAGATCAAAGTATTGTCAAACTTCTTGT
GCGTCCTTTAGGATATCCGAGCTTCGTTCAAATTATCTCCCTAAACACAC
TCGGTGAGACGCAAACAACTGGAGGTGATTATTGGGATGTCAAACTTTGC
GGAGATAAAAACACAACtctaaatattgaaatgatagACCATGACGACGG
CTCTTACACAGGCTTTTTCTACCTACCAGAGGATCTGATGATATCAAGTA
GtaaatttgaattgaaatatttgctgGAATACAGTCAATGTAACGGATTG
AGAGACATGCCGGAAAATTGGTTCAAAACAGGGACGAttcaaggaaaatt
tcaacGAGATGGTTCAATTGGAGACCATGATGATTTTCTCCATCAATTAC
AAACcacaaaactattgttccataTACCACGTGATCAAAATGAATTCAAC
TCATTggtgcaaaattttgaaatttcccaaaAGAGTCAAAAGCCTTTCAA
TAAATATTGTGGATTTTGGCATGATGGCTTGTTCAGGGAATTTCATCAAA
AAGATGTTGCTAATACAGAGCCTCGTTTGAATGTCCATGcacctcctttt
caaacattaaaAATATTTGGAGATTCGATGGGACGACACTTCCACGAATC
AATAGTTGCAAATCATTCTCTATGTAAAAACTTGTTCAAGAAATGCGATT
TATCTTACACGTGGGTTTACAAAATGTACAATCGAACCAAAGACTTCCAT
GATGGCGTTCATATTTACGACGATAAAGactttaaccagactcattatCT
GGAAGACATTCGTAGAGATTTATACTCCAAAAACATGAGACATGACAAAA
GTGTTTATTTGGTCAACTTTGGCGTCCATACTATTATGACTTTACCACTA
AACAAGCTACGTGAACTTTTACAAGCATTCTTTGATCTGATCTCGAATAT
GAAAAAGAGGTTGGAACCGAGAGAAATACCCCTCATTATCTGGAAATCAA
CAACTTATCCCATCTTAGAGAATTTCAAGCCGAGTACAACAACTCAATTA
CGATTCTTAACAAAGCAGaGAGTGAGGTATTGGAATTCGTACTCCCTCCA
AATGATGAAAAGACGGCACATTCCGATCCTTGACGTCACTACCATGGCAA
CATCGTATCCATGGGGTCCATATGACATCATGCATTATAACAACCTCGTT
TTCAGACAAGCTGAAGATGATTTAGAAACTTTTATAATTGAGAAGTTAAG
TTCAAAGGACATGTTGAAAAGTAAATGGATGAGTTTCGTTCATTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045119XLOC_045119Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072689-exon-scaffold_82-1491911889:247178..247351TCONS_00072689-exon-scaffold_82-1491911889:247178..247351Clytia hemisphaericaexon
TCONS_00072689-exon-scaffold_82-1510915933:247178..247351TCONS_00072689-exon-scaffold_82-1510915933:247178..247351Clytia hemisphaericaexon
TCONS_00072689-exon-scaffold_82-1575043694:247178..247351TCONS_00072689-exon-scaffold_82-1575043694:247178..247351Clytia hemisphaericaexon
TCONS_00072689-exon-scaffold_82-1491911889:248068..248726TCONS_00072689-exon-scaffold_82-1491911889:248068..248726Clytia hemisphaericaexon
TCONS_00072689-exon-scaffold_82-1510915933:248068..248726TCONS_00072689-exon-scaffold_82-1510915933:248068..248726Clytia hemisphaericaexon
TCONS_00072689-exon-scaffold_82-1575043694:248068..248726TCONS_00072689-exon-scaffold_82-1575043694:248068..248726Clytia hemisphaericaexon
TCONS_00072689-exon-scaffold_82-1491911889:248975..249711TCONS_00072689-exon-scaffold_82-1491911889:248975..249711Clytia hemisphaericaexon
TCONS_00072689-exon-scaffold_82-1510915933:248975..249711TCONS_00072689-exon-scaffold_82-1510915933:248975..249711Clytia hemisphaericaexon
TCONS_00072689-exon-scaffold_82-1575043694:248975..249711TCONS_00072689-exon-scaffold_82-1575043694:248975..249711Clytia hemisphaericaexon
TCONS_00072689-exon-scaffold_82-1491911889:250495..251505TCONS_00072689-exon-scaffold_82-1491911889:250495..251505Clytia hemisphaericaexon
TCONS_00072689-exon-scaffold_82-1510915933:250495..251505TCONS_00072689-exon-scaffold_82-1510915933:250495..251505Clytia hemisphaericaexon
TCONS_00072689-exon-scaffold_82-1575043694:250495..251505TCONS_00072689-exon-scaffold_82-1575043694:250495..251505Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072689-proteinTCONS_00072689-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_82supercontigscaffold_82:247178..251505 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.05 10.7821 6.13491 5.6637 1.40717 1.20474e-07 1.34154 5.02373 2.63792 1.08916 1.49137 1.38988 2.10775e-09 0 1.32764 1.00758 7.93519e-09 0.80288 1.6783e-08 1.26775 1.00845 1.24879 7.68944 6.93175 5.2557e-09 7.67726e-09 1.21119 4.94054e-09 3.08451 4.38907
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR014756Ig_E-set
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072689 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top