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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072688 ID=TCONS_00072688|Name=TCONS_00072688|organism=Clytia hemisphaerica|type=transcript|length=1338bp
aaactttcaaaaccgcgtaaaatcagaacatttcaactttttcaagtcgg
tgatacttttttttgtcatatttatatttattttttgctgctAATTCTCG
TGTACTAGGTTCCAAATAGACGNtacttttttttgtcatatttatattta
ttttttgctgctAATTCTCCTTTAAGATGAAATAGAAGCaatacaaatga
aatggttCATTAAAGTATACCTGGTAACATGTTATAGTATCCTGGAGTAA
GCACagaaaaaagagcaaaatagcCTGTGCTGCAGTTGTGGGATGGTAGT
GGTCACCGACAAACCTATCATTAGGACTAAAATACTTGAccaatgaaaaa
atagttttaaccaaaacattccccacaaaatttggtgaaaagtcataaaa
tttcagcttcatagcctcactagttaaaaaatgtcggccaattttctaac
aggggggggggcacaaagtgcccccctctcagtaggtagggttgAACAAA
CAGCACAATCTGACTCAGTGGAATGCGTTTCAAATTCTGCAATTGTCTGA
GGTTTTGGGTTTGAGACTCGGTTCAACTGACGAGCCCATTTTGCACATAA
TTTCTTAGGGTGGATAGATAACCAGGCatttgaaatatcatatttaaaCA
ACTTTCTAATTTCCTCTTTGCATTCAAGTGCATATCCTGGCATGGGTGCA
ATGACTTCACCACGACAAAGACGACATATACTAGAAAGTTTTTTAATGTG
GTCATCGGCCATTTTAAACAATTAACTAGATATTTAgggatcaaaaaaaa
tttaattacgGTCTTTTAGTGTGATGTGATATCGAAAGAAACAAGTGCCT
TGAAGTGCCTCGATAAGCTACTgacatgattttttttgtattcGATCGAG
AAAAGGTCAAGAAATACTGGGATGAAGTTTCAAATAATAAATCATAGAAA
TGGCTCCAGAAATTCAACTTCTCTTCTGTTAAGTTCTACAGGTCCTGAGC
TTTTTTTGTGCTGGTGTTTTATGGAGAGAATGTAAAATACCAATTCCTAT
GTCGCCTTATGGCCAAGTACAATCTCAAAGCACTGATCGTCTGGACTGTT
TGACCTCGTGAAAGGGTGACTTATATTGTCTTCTTACAATGTTTTTAACG
AATAACAAGATTTTTTAGTTTAGTCCTGGATTTGTTTCGAGATTTTTAAA
ATTAACCAGGAACTATGAACtattaaacaaaatttttctaaatattatcT
GATGATGTTACAGACTTAATTTGCGAGGGCGAATAAAACGATAATATCTA
GTCGGATAATACTtgatatttttgtctattttttgttG Run BLAST on NCBI transcript from alignment at scaffold_82:244023..245360+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072688 ID=TCONS_00072688|Name=TCONS_00072688|organism=Clytia hemisphaerica|type=transcript|length=1338bp|location=Sequence derived from alignment at scaffold_82:244023..245360+ (Clytia hemisphaerica)
aaactttcaaaaccgcgtaaaatcagaacatttcaactttttcaagtcgg
tgatacttttttttgtcatatttatatttattttttgctgctAATTCTCG
TGTACTAGGTTCCAAATAGACGNtacttttttttgtcatatttatattta
ttttttgctgctAATTCTCCTTTAAGATGAAATAGAAGCaatacaaatga
aatggttCATTAAAGTATACCTGGTAACATGTTATAGTATCCTGGAGTAA
GCACagaaaaaagagcaaaatagcCTGTGCTGCAGTTGTGGGATGGTAGT
GGTCACCGACAAACCTATCATTAGGACTAAAATACTTGAccaatgaaaaa
atagttttaaccaaaacattccccacaaaatttggtgaaaagtcataaaa
tttcagcttcatagcctcactagttaaaaaatgtcggccaattttctaac
aggggggggggcacaaagtgcccccctctcagtaggtagggttgAACAAA
CAGCACAATCTGACTCAGTGGAATGCGTTTCAAATTCTGCAATTGTCTGA
GGTTTTGGGTTTGAGACTCGGTTCAACTGACGAGCCCATTTTGCACATAA
TTTCTTAGGGTGGATAGATAACCAGGCatttgaaatatcatatttaaaCA
ACTTTCTAATTTCCTCTTTGCATTCAAGTGCATATCCTGGCATGGGTGCA
ATGACTTCACCACGACAAAGACGACATATACTAGAAAGTTTTTTAATGTG
GTCATCGGCCATTTTAAACAATTAACTAGATATTTAgggatcaaaaaaaa
tttaattacgGTCTTTTAGTGTGATGTGATATCGAAAGAAACAAGTGCCT
TGAAGTGCCTCGATAAGCTACTgacatgattttttttgtattcGATCGAG
AAAAGGTCAAGAAATACTGGGATGAAGTTTCAAATAATAAATCATAGAAA
TGGCTCCAGAAATTCAACTTCTCTTCTGTTAAGTTCTACAGGTCCTGAGC
TTTTTTTGTGCTGGTGTTTTATGGAGAGAATGTAAAATACCAATTCCTAT
GTCGCCTTATGGCCAAGTACAATCTCAAAGCACTGATCGTCTGGACTGTT
TGACCTCGTGAAAGGGTGACTTATATTGTCTTCTTACAATGTTTTTAACG
AATAACAAGATTTTTTAGTTTAGTCCTGGATTTGTTTCGAGATTTTTAAA
ATTAACCAGGAACTATGAACtattaaacaaaatttttctaaatattatcT
GATGATGTTACAGACTTAATTTGCGAGGGCGAATAAAACGATAATATCTA
GTCGGATAATACTtgatatttttgtctattttttgttG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072688-exon-scaffold_82-1491911889:244023..245360 | TCONS_00072688-exon-scaffold_82-1491911889:244023..245360 | Clytia hemisphaerica | exon |
| TCONS_00072688-exon-scaffold_82-1510915933:244023..245360 | TCONS_00072688-exon-scaffold_82-1510915933:244023..245360 | Clytia hemisphaerica | exon |
| TCONS_00072688-exon-scaffold_82-1575043694:244023..245360 | TCONS_00072688-exon-scaffold_82-1575043694:244023..245360 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_82 | supercontig | scaffold_82:244023..245360 + |
Blast
The following BLAST results are available for this feature:
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