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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072650 ID=TCONS_00072650|Name=TCONS_00072650|organism=Clytia hemisphaerica|type=transcript|length=1093bp
AcaaaaatttgtccaaaaaaggaaTCGCCAAAtgcgatttttcaattttt
cgtttcgctcccgaaaattagttcccaaaAGGTAATTGATAAACCCCAAA
TCTCTCGGTTCAATATACTCTTTTTTGTTACTAGAACAATTTATAAGAGC
AATGAGGCTCAAAAGAgaaataagaacaatgctgagcctggaatgactga
atttcaaacaattaagggtcaaagtagtaaaaatttgtTAGAAAGCCTAA
AATACTTTTGCcctaaaattaagaacaaaataagaacaatatgaagctca
aagtgcaaaaaaataagaacaaacgaatctcaacaaaaatttactgcaTA
CTGGTTCTTAAGGATAACCAGTAATCTAAgtcttttagacagtctttcga
ttgtttccATGGGACCCATATTGCCATCTGGCTCGGCTGAAAAACAGAAC
GGAAAAATGGAAGTAGCCGGGATGCGGACCACGAAAACTGGTTTGTAGCA
CAGACGCCTTTGATCACTTAATCATCGTTCTTCCATGTCATATTTATACT
TCCATGTTATCTACTCACCAATTTCAAACGTTAGGAATGAGTGTGAAATT
AAGTTCTAAAACCGCAAATTTGCGATATGACAGGTCAATTTAATTGGTAG
CACTACATCCGACATTAAGTGActaatcaaaagttattttcttattgttc
aaatcaaattttcaggatttcctaAATTAACCCTATTAATATCCAAGCAT
tctttgaatgaaattttcattttcttgaaaaagttTTGCTTTTGATAGGG
AAGTACATAACAGAAtaaaattatttgagtaaaGCAGTTGTAcagagtaa
tttttttttggttgaacAATTCTAGAAATTGAGTTAAAAAGTATACCGGC
AAATATTAGGTCACTTATTTTCACTTCAGTCTTATGGAAATCGTAATTGG
AACGTAAAAAATACAACGGACTTGAATACTTGTTAACTTGTCAAATGATT
TTGTGTTATAGCTTAGAATTATTGATCGAGATTTTTCGCTCTTTTACTGT
AAGCTGTACTTACACCATGATAAAAACGAGATGATATAATGCT Run BLAST on NCBI transcript from alignment at scaffold_80:13798..14890 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072650 ID=TCONS_00072650|Name=TCONS_00072650|organism=Clytia hemisphaerica|type=transcript|length=1093bp|location=Sequence derived from alignment at scaffold_80:13798..14890 (Clytia hemisphaerica)
AGCATTATATCATCTCGTTTTTATCATGGTGTAAGTACAGCTTACAGTAA
AAGAGCGAAAAATCTCGATCAATAATTCTAAGCTATAACACAAAATCATT
TGACAAGTTAACAAGTATTCAAGTCCGTTGTATTTTTTACGTTCCAATTA
CGATTTCCATAAGACTGAAGTGAAAATAAGTGACCTAATATTTGCCGGTA
TACTTTTTAACTCAATTTCTAGAATTgttcaaccaaaaaaaaattactct
gTACAACTGCtttactcaaataattttaTTCTGTTATGTACTTCCCTATC
AAAAGCAAaactttttcaagaaaatgaaaatttcattcaaagaATGCTTG
GATATTAATAGGGTTAATTtaggaaatcctgaaaatttgatttgaacaat
aagaaaataacttttgattagTCACTTAATGTCGGATGTAGTGCTACCAA
TTAAATTGACCTGTCATATCGCAAATTTGCGGTTTTAGAACTTAATTTCA
CACTCATTCCTAACGTTTGAAATTGGTGAGTAGATAACATGGAAGTATAA
ATATGACATGGAAGAACGATGATTAAGTGATCAAAGGCGTCTGTGCTACA
AACCAGTTTTCGTGGTCCGCATCCCGGCTACTTCCATTTTTCCGTTCTGT
TTTTCAGCCGAGCCAGATGGCAATATGGGTCCCATggaaacaatcgaaag
actgtctaaaagacTTAGATTACTGGTTATCCTTAAGAACCAGTAtgcag
taaatttttgttgagattcgtttgttcttatttttttgcactttgagctt
catattgttcttattttgttcttaattttaggGCAAAAGTATTTTAGGCT
TTCTAacaaatttttactactttgacccttaattgtttgaaattcagtca
ttccaggctcagcattgttcttatttcTCTTTTGAGCCTCATTGCTCTTA
TAAATTGTTCTAGTAACAAAAAAGAGTATATTGAACCGAGAGATTTGGGG
TTTATCAATTACCTtttgggaactaattttcgggagcgaaacgaaaaatt
gaaaaatcgcaTTTGGCGAttccttttttggacaaatttttgT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072650-exon-scaffold_80-1491911889:13798..14890 | TCONS_00072650-exon-scaffold_80-1491911889:13798..14890 | Clytia hemisphaerica | exon |
| TCONS_00072650-exon-scaffold_80-1510915933:13798..14890 | TCONS_00072650-exon-scaffold_80-1510915933:13798..14890 | Clytia hemisphaerica | exon |
| TCONS_00072650-exon-scaffold_80-1575043694:13798..14890 | TCONS_00072650-exon-scaffold_80-1575043694:13798..14890 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_80 | supercontig | scaffold_80:13798..14890 . |
Blast
The following BLAST results are available for this feature:
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