TCONS_00072606 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072606
Unique NameTCONS_00072606
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length287

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072606 ID=TCONS_00072606|Name=TCONS_00072606|organism=Clytia hemisphaerica|type=transcript|length=287bp
TTCATTTTCTAAGATTTTAGGAAATGATAGCAAAATGTATTTTACTGCAA
GAAGTTTGCGGTAAGTCGAGCTGGTTTGTTGTTCGGTTCGGTCAAAGTTC
CCCTTCGCTATGATGTTACCGAGTTTTTCCACAACATAACCCCCGTAACC
GGTTTCGCTTGCATCCGAAAAAACGATTTTTGTGACTTCAGGTTGTGTGT
TAATTCTAAAGCTCTTCGTGACTCCTAAATTGTCTTTCCAAAATTAGTGC
TCTTGTCTTACATCAAATGTTAGGAGACATTTTTTGT
Run BLAST on NCBI

transcript from alignment at scaffold_8:326530..326816

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072606 ID=TCONS_00072606|Name=TCONS_00072606|organism=Clytia hemisphaerica|type=transcript|length=287bp|location=Sequence derived from alignment at scaffold_8:326530..326816 (Clytia hemisphaerica)
ACAAAAAATGTCTCCTAACATTTGATGTAAGACAAGAGCACTAATTTTGG
AAAGACAATTTAGGAGTCACGAAGAGCTTTAGAATTAACACACAACCTGA
AGTCACAAAAATCGTTTTTTCGGATGCAAGCGAAACCGGTTACGGGGGTT
ATGTTGTGGAAAAACTCGGTAACATCATAGCGAAGGGGAACTTTGACCGA
ACCGAACAACAAACCAGCTCGACTTACCGCAAACTTCTTGCAGTAAAATA
CATTTTGCTATCATTTCCTAAAATCTTAGAAAATGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045066XLOC_045066Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072606-exon-scaffold_8-1491911889:326530..326816TCONS_00072606-exon-scaffold_8-1491911889:326530..326816Clytia hemisphaericaexon
TCONS_00072606-exon-scaffold_8-1510915933:326530..326816TCONS_00072606-exon-scaffold_8-1510915933:326530..326816Clytia hemisphaericaexon
TCONS_00072606-exon-scaffold_8-1575043694:326530..326816TCONS_00072606-exon-scaffold_8-1575043694:326530..326816Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_8supercontigscaffold_8:326530..326816 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072606 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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