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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072581 ID=TCONS_00072581|Name=TCONS_00072581|organism=Clytia hemisphaerica|type=transcript|length=1250bp
aaggtctatagTTGGCGAGTAAAATAAATGTTTGATGTTTGGATGGTTAG
TCTCAGGAAGTTTTTGAGCCCTGCTGGACATTGAAGATGAAATTTTACGT
CCGTAGTCTGCACAAGCTTTACATTTAATATTATTACCAATTCACAATTT
AGATGTCGGATTGTCAGCTTGTCTGGATTGATTTGGTTGAATGCAGGTGA
TTCAATGCAAGTAGCAACTTTTCCTTGTTTGTCGAGAAATGTTAGATCAC
TTCCCTTATCTACTTTTTTCTTGACAACTTCCTCATATCTCGTATTACCC
TCGCATACATTGTACAATGGTAACATTTCGAAAAATTCATTAACTTTTTT
CATTGACTATACTGGATCAAACTTTTGGTAAAGTTCATGTTGAGCTCTGC
AAGCTGTCTAATACTGGCAAACAACGAGTCGAGTATTGTGGATGTTTTCT
CTTGAGTTCGAGCTTTCTCTCTTCCACAAATATAAGGTGGGGCATAAATG
CCACTTAACACATCAGCGTCAAACAATGCTTATATCTCTGTTTTGAAGTC
AGTGATAGGTCTTAAACTTGACTTAGTTCTCTTGAACTAGTGTCTCCTCG
TGCAACTACCACAAAAcaaatttgaacaattttggATAAACGAGTCCAAT
CTGTCAATTTTTTAAGGGAAACCCCAAAGGGGtggacaaaatttgaaata
aagccTCACTGGGGTTTCCAATGTGATGCAatcaatcaaaatatgaaaag
atTCACACGTCACtaatcagtgtaagaaaatcgCCACTTTGAACGTCACG
CCGACGGAGTGTGCGCATGCGAAGACATTGTTAAGAACAATGGAAAACAA
TGACCATTGTTCGAACTAGAGATTGCTTATCTCCATGTATCTTGATTGAT
CATTCAGTGAAGATTATCAGGCTACCAGGAGAAAATGCGATGCAAGGGTG
TAAAAATTGGGAATATGGAAAGGTACAAACAAGTTATCCCCTAATGATAA
TAGAGAAAATTGTCTTTAATAAAATCAACCAATTTTGTCTTGCGTCCGAT
TTTAAAAATCGTTCGGCATCGGACAGTCGTTTTCAACTATAATATATATC
CTCTTGCGGGCTTCAAAGTTCTGCGTAGGGATGGATTAAGTGACAAGTTT
TCAGATATCAACCATAGCATCCCCGAAATTTAGCGGTTTTGTGAAGTATC
AAAGTCTgattaatttattttattctaaataAAAAGGGTTTTACAGCAAG Run BLAST on NCBI transcript from alignment at scaffold_8:16619..17868 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072581 ID=TCONS_00072581|Name=TCONS_00072581|organism=Clytia hemisphaerica|type=transcript|length=1250bp|location=Sequence derived from alignment at scaffold_8:16619..17868 (Clytia hemisphaerica)
CTTGCTGTAAAACCCTTTTtatttagaataaaataaattaatcAGACTTT
GATACTTCACAAAACCGCTAAATTTCGGGGATGCTATGGTTGATATCTGA
AAACTTGTCACTTAATCCATCCCTACGCAGAACTTTGAAGCCCGCAAGAG
GATATATATTATAGTTGAAAACGACTGTCCGATGCCGAACGATTTTTAAA
ATCGGACGCAAGACAAAATTGGTTGATTTTATTAAAGACAATTTTCTCTA
TTATCATTAGGGGATAACTTGTTTGTACCTTTCCATATTCCCAATTTTTA
CACCCTTGCATCGCATTTTCTCCTGGTAGCCTGATAATCTTCACTGAATG
ATCAATCAAGATACATGGAGATAAGCAATCTCTAGTTCGAACAATGGTCA
TTGTTTTCCATTGTTCTTAACAATGTCTTCGCATGCGCACACTCCGTCGG
CGTGACGTTCAAAGTGGcgattttcttacactgattaGTGACGTGTGAat
cttttcatattttgattgatTGCATCACATTGGAAACCCCAGTGAggctt
tatttcaaattttgtccaCCCCTTTGGGGTTTCCCTTAAAAAATTGACAG
ATTGGACTCGTTTATccaaaattgttcaaatttgTTTTGTGGTAGTTGCA
CGAGGAGACACTAGTTCAAGAGAACTAAGTCAAGTTTAAGACCTATCACT
GACTTCAAAACAGAGATATAAGCATTGTTTGACGCTGATGTGTTAAGTGG
CATTTATGCCCCACCTTATATTTGTGGAAGAGAGAAAGCTCGAACTCAAG
AGAAAACATCCACAATACTCGACTCGTTGTTTGCCAGTATTAGACAGCTT
GCAGAGCTCAACATGAACTTTACCAAAAGTTTGATCCAGTATAGTCAATG
AAAAAAGTTAATGAATTTTTCGAAATGTTACCATTGTACAATGTATGCGA
GGGTAATACGAGATATGAGGAAGTTGTCAAGAAAAAAGTAGATAAGGGAA
GTGATCTAACATTTCTCGACAAACAAGGAAAAGTTGCTACTTGCATTGAA
TCACCTGCATTCAACCAAATCAATCCAGACAAGCTGACAATCCGACATCT
AAATTGTGAATTGGTAATAATATTAAATGTAAAGCTTGTGCAGACTACGG
ACGTAAAATTTCATCTTCAATGTCCAGCAGGGCTCAAAAACTTCCTGAGA
CTAACCATCCAAACATCAAACATTTATTTTACTCGCCAActatagacctt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072581-exon-scaffold_8-1491911889:16619..17868 | TCONS_00072581-exon-scaffold_8-1491911889:16619..17868 | Clytia hemisphaerica | exon |
| TCONS_00072581-exon-scaffold_8-1510915933:16619..17868 | TCONS_00072581-exon-scaffold_8-1510915933:16619..17868 | Clytia hemisphaerica | exon |
| TCONS_00072581-exon-scaffold_8-1575043694:16619..17868 | TCONS_00072581-exon-scaffold_8-1575043694:16619..17868 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_8 | supercontig | scaffold_8:16619..17868 . |
Blast
The following BLAST results are available for this feature:
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