TCONS_00072579 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072579
Unique NameTCONS_00072579
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1401

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072579 ID=TCONS_00072579|Name=TCONS_00072579|organism=Clytia hemisphaerica|type=transcript|length=1401bp
ATCAAATCCAAAATGGTGTCTGCAATCGAACGTTTCGGCGCGGCGCGTGT
ATCGTATCCAGGTATCATTTCACCTTTTATAACAAACAGTCACAAACAGC
ATCCTACATGTTTACCTGTTAGTATATAACAATTTAGATAAGCATGGAGG
GTCAAGTAAGCCAAACCATTTACATTAATAATCTCAATGAGAAGATTAAA
CAAGAAGAGGTCAAGAAATCATTGGAAGCAATGTTTAGCCAGTTCGGGAC
AATCTTGGATGTTGTTGCaatgaaaacattgaaaatgaaaGGACAAGCTT
TTGTAGTTTTTAAAGATGCAAGCAGTGCGACACAAGCAATGCGCTCTATG
CAAGGGTTTCCTTTTCACGATAAACCATTGAGGATAGCATACGCTAAATC
TAAATCAGATGTAGTTGCAAAGATGGACAACACTTTTGTTCCAAGAGACA
AGAAGAAGAGGAAGGCTGAAGAAgCCAAGAAGAAACTTCAAGCTATTGCT
GCAAAACAAGCTAAAATGCAAAACCAGTTCAATCCTATGATGCAGCCTGG
TGTCAACCCTTACCAAGCAATGGGACAACCACAACAGCAACAAATGCCAG
CCGTTGAACCTCCACCAAATCATATTTTATTCTTGTCTAATTTACCAAAT
GAAACCACCCAACTTATGTTGTCAATGCTCTTCCAACAGGTTCCTGGTTA
CAGAGAAGCTCGTCTTGTCAACGGAAGACACGATATTgcatttgttgaat
ttgaaaatgctgACCAAGCAAAACGAGCTAAAGAACAATTGAATGGTTAC
AAGATCAGTCCCTCGCATCCTATGGTTATTACTTACGCTAAGAAATAGGT
TGAAACTATTGGGCTATATGGAATGGGATACTTGTGCAGAGTAGATTCTA
TTTTGTCTGTCACGCTTTTTTAAAAGATGTGATGTGCCATATAATGTACA
TAATTTTGGAAAGCAATTACCACTCTGCCTTTTTCTGGTTGGCACGAAAC
ACAGCGAAACAAATGAATTGGTAACATTGATGGCACTGACCTCTATAAAT
GCGACGTGTCAGGATGTGTTTCAAATTGTAGTTTTTCACTTGCTGCATTG
CACTTCGCTCAAGTGAGAAACACTCCCTCTTGAAAAAGgttattgaaaac
atttcattaCGGGTTGGTTCTATTAAACCCTTGGCATGGTCAAGAAAAAG
CGTGGGTTGTGAACTGAAATAtcctaaaaacaattatagCAAAACAAAGC
TCCCTTTTTGTTAAAAACAATGAAGGGTTTGTTTCCAGCTTGAGCTGAAG
TGTATATCTGGCAACATTTTAATGGTGTTTTTgtgtagaaaatattttta
caattttaaattttttaatgaaaataaaattttattgaaaactcCTTCCA
C
Run BLAST on NCBI

protein sequence of TCONS_00072579-protein

>TCONS_00072579-protein ID=TCONS_00072579-protein|Name=TCONS_00072579-protein|organism=Clytia hemisphaerica|type=polypeptide|length=234bp
MEGQVSQTIYINNLNEKIKQEEVKKSLEAMFSQFGTILDVVAMKTLKMKG
QAFVVFKDASSATQAMRSMQGFPFHDKPLRIAYAKSKSDVVAKMDNTFVP
RDKKKRKAEEAKKKLQAIAAKQAKMQNQFNPMMQPGVNPYQAMGQPQQQQ
MPAVEPPPNHILFLSNLPNETTQLMLSMLFQQVPGYREARLVNGRHDIAF
VEFENADQAKRAKEQLNGYKISPSHPMVITYAKK
Run BLAST on NCBI

transcript from alignment at scaffold_8:491360..507151-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072579 ID=TCONS_00072579|Name=TCONS_00072579|organism=Clytia hemisphaerica|type=transcript|length=15792bp|location=Sequence derived from alignment at scaffold_8:491360..507151- (Clytia hemisphaerica)
ATCAAATCCAAAATGGTGTCTGCAATCGAACGTTTCGGCGCGGCGCGTGT
ATCGTATCCAGGTATCATTTCACCTTTTATAACAAACAGTCACAAACAGC
ATCCTACATGTTTACCTGTAAGACATTTTTTAACCATTTCTTCTCGCTAA
TCTTCTTCATTTTGCTCTATGAAAGTTGTTTTATTTTCTTTTTCATCGCC
TAGCCCCCGGTAGTCAGCAAAAAGAGGACCCTGCCGCCGACGCACCAGTG
TATTTGTCCGGTGGCAAAAAGTATCCTTTCGCTACACCGGACGCAATAAG
TCCGGTGTCAGTCCGGTGTTGCATACAGGGAATTTTGGACATTTATGAAA
CAAAAAATTAAGAAACATCGGACGCACCGGACTGGTCATGTCTGGCGTTT
TGATTGTCCGGTGGGTAAATATATCCTTCTCCGACACCGGACATCCAACT
TCCTTAAGTCCGGTGTAGAAATTGTCCGGTGGTAGAAAAAATTCTCATTT
TACACCAGACTTTCGCGTGTCCGGTGTTCGTTAAGTCCGGTGCGTCAGCG
CCGGCACACAAGTGTTACGCGTAAGCCAAATCGCGTATTACTGCGGGGTC
ACTGACAAGGAGTTACGACTTCAGACTTTAGATTCCAATTCTTGTATAGG
CTGCAACTACACTGCCAAATGATCTGTATTACAAAGACTTCCAATAGACC
TTTTCGCCAGATTTCGCTAAATGCACAGAGCGCGCAGAGCAATTTTTTTC
CCCGATAATTTTTCCTATCCGTCAATCCGTGATTCAGGGGGTATTGGGAG
GTAGGGTCAGGGTTGCTAGTAACGGCTTGTCACTGTGCCGGGTGCATCCT
CGGCGCCTTGGGCCCCGCAGGGTTGCTAGTAACGGCTTGTCACTGTGCCG
GGTGCATCCTCGGCGCCTTGGGCCCCGCAGGGGTGCTAGTAACGGCTCGC
AATTCCGTCAGGGTTTAAAAAGGGGGACTTTTACCCATATTATAATAACA
TTACCCCCGTCTTTTGCCAGTTCGGTATAATGTGTTATGAATTGCATGGT
TTTGCTGTGCGGCGATGGCTCAACGGATAGAACGCTGGCTTCCGAATCTG
AAGGTCTTTCTTTGGTGGTGGTTCGAATCCCACTCGGTGCGAAAAATTAG
ACTGGTCGAAATTGATGGACAAATGATTGACAGGTATGAAAACTCAGTCA
GAAATGAGAAAGTAAGTCTCAGAAAGTAGAACAAACAGGTAAGGTGAAAG
ATAGGAAAGGGAAAATGGGCCGTCGCGCTCTGTGCATTTAGCGAAATGTN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATATGTTTTGC
ATACTTTCTAAGGGAATTTCACCACGGCAATTCGGCAACCATAATTTTTG
CATACAATTCAATATGGCGGACGCAAAGGCGAAAAGGTCTATTGGGTCCA
TAAGTTAAGAAAATGAGATTATCTTATAGCACNGCAAGGAGTTACGACTT
CAGACTTTAGATTTCAATTCTTGTATAGGCTGCAACTACACTGCCAAATG
ATCTGTATTACAAAGACTTCCAAATGGGTTCATAAGTTAAGAAAATGAAA
TTATCATCTAGCATGGGGGTTTGTTTTTAAAAACAAACTTCAAAATGAAA
TTGTTAATAAACTTGTTACTTAAAATATCACTTACTTACATAATTCATTT
ATGATATAACACCCCTTTCTTAAATAAATGACCTCTTAAAGTCTTTTATG
TTTGCCGCAAGAAGGAAGAAAAATTTAATTTGACCCTCGGTTTTTTCTCT
CGTTTTCTAGCCATTTCCCGCGTGTTAGTGTAAACACAACTTTAATCCGG
GGAAATGAAGCGTTTTCATTGGTCTAAAATCACGGATGGTCACGTGACCA
GAATTTTTAACCAGGGAAATGCTGTGGCCACAATGTTTTGCTTTAGTGAG
ATTGACCATTTTGTTGTTTAGATTTGAGCGGGCGAAATTTCTGTACAAAC
CAAAATATGGCTTCGTTGGAATACCGGTTGAAACACTTGTGGGCAGGGTC
CTGCAAAAAGTAGTTGAGCTCCAGAGGTTCTGGACTAACACTAATAGCAA
CTCCAGAAGATTTAATTTCTTTTTCAAAATCTATCCTATCTTGAAAAAGA
AAGAAAATGAGGGGTCATAGGCCTCCAGAGGATTAGTGGTTGTAAAGATA
TTCAAATTTTAGTGTCAAAAAATTGACTAAAAATGTCAAAAAAAAGGTTA
GGAAAATAGCTTGGAAAAATTCAAAAAATGTGTCAAAAAAGAAAAAAAAG
AAATTTTCCAGTCATGCTTCTTAAATTTTGCATATCTCTTTTTCTAGTAG
CTAGAGACCTCAAATTTGGAGGGAGAATTCTTTGATGGTGTTAAAATATT
ATTATATAAAAATATTTGTAAAATATTTAAGTATATTTATCATAATAGCG
AAAGATATATCTTTTTTTGAAAAAAGAAGACATTGCATTGTTTTATTTTT
GTTTTTGAAGAAAATAGCTTGGAAAAGGTTGAAATGAGTCAAAAAAGGTG
GTAGGACCCATTTTCATGGGGCCTCCTGAAATGGAGGAACAAAAACTTAC
GAGTAAAGAATAAGTTTTTCTGAAAGGAGAAACCCCAAATGAAAATCTAT
TTCGGCAGAAATACTTTTTTTTGGGACATTCCCATGCTAAAGAAGCAAAA
AAGTTAAAAAAACTACATTAAAATGAAAGAACTAGAATTAGCGACTTGTG
ATTTTTGAATTCCTCACCCTTTTTCTGATAAACATACAAAGTTTCAGCCT
CCAAATACATTTTCCTCCGTTTCCAGACACATTTGTTCTTCGATAGTTGC
TAATTTTTTTCTCCCGTCGACAAACAATTTTCAAAATGTTGCAAAACGTT
CGGCATTTTACCAATTTGCCGTCTAGCCCGTGTCCACAGCGTTATATACC
GCTGGAAAGCTAAGATCACGGGCTTTCATTTAGTAAAAACTGGAACGCTT
TAGCATACATAGAAAAAAAGTTCCAAGGGTTCAAAGTTCACGGGAAAATG
AAACATTTGGTTTGACGTCAACGAAAGTTGCATGACTTCTGGAGTCGCTA
ACACTAAGCCAGTAATGCAGTATAGATAGACTTAAACTTGTATATCAAGA
TTACGGGATTTCAAATACAGGCCGATTTTACTTTTGTATTGAGTGGTTTC
ATTTTCGATTTCAAGCCAACATCTTAGCAACGGGGTGCTTGTCCATACGG
TGAGTGGTCCTAAATCAGACAGCCCTGCCTATATCCGACCCCCCAAAACA
AACATTCCCTCTCCAAGTTGAACAATAAACTGTATTTCAAGAAGTCTCGA
AACAAAACATCTAACAAGATGACTATAATATCAAGATGTCAATTAATGTG
ATAAAAAAGTGTGAGTTGTAAAAATAATTACCTCTATTATTCTGAATCCG
TTGCTTGTATTTAAAACGTTAACAATTTTGTAATAAAAAATTATGTTTTG
TATAAGAAGTAATTAATGTTTTGGTTCAATTGGTTCAGTGTATCAAATCT
CTTAGTTTAGTTGACACTTTGGTATCTTTGTTGCATCACAGCGAAAGGTT
TGTTTTTATTTCAGTTTGTATCTTTGAAAGACCCCATCGGATTTAGGCAG
GGCTGTGGGATTTAGGCCCACTCACGGTAGTTACAGGGGTTTGTGCAAAA
AAATAAACATAGAAATTTTTCCAAATCCCCCATTTCGATTGCTGAAGCAA
TGAAAAATAATAAATATGGCCAACTTCAAGCCATACGTTGACGTTAATTC
TCAGCGATGTCATTTCTTCGCTAGCTTGGCTTGGCCCAGAGCTCAATAGG
GACCCCTCAGAGTATATTTTTAGACTTGGCTGAAGGTGTACGTCAGTAAC
AAGTGGTTCACGAGTTGTAGAAACGTCTCACTGCTTTCCATCCCACCGGG
GGTCTGGTACGAGTTCTGACCCCCCCTTCCCTTCCCATGAACTTTTCAGG
ACTTCGGACCACTTTTTTTGGAATCTACACCCAAGAAAACATAAAATATC
AAAACCTGGTCAAAAATTGGGACTTTGACCCGAACCGGATCGGATTTGAA
CAGGGGATCCACAGTGCGTGAACTTCGGATTAGAAACACCGGTCTGTAAA
ATGAATATTAAGTCAGTAAATTGAAAGCGTTTCAAAATAAAAACAGACAT
TTTACTTTGTATGATAATTCAATGACTACTAACAATTATAGAATAATTTA
TATATTGTCGAAACCGCAAGCAAAGCTCCACTCTACACGTTGGGATATTT
TATTTTTGAAATTTCCATCAAAAAGATTTAACCTGTAACCTGAAACCTGA
ACCTGTAACCTGAAACCTGAAACCTGAACCTGCGTTTCGAACTAGCCGGA
AAATATTTAAGATTTTAAGTTCTTCTTTTATTCAATGATTTTTTACAGCA
CTTTGTTGACAATCTATAAACTCTTGCGTCAAATTCCCACTTTCTTCAGT
AAAGTGAAGATGAGAAAAAACCTAAGCCACGGATCACGGATTGAAACAAA
TATATGAAGGGTGGGATTTTACAGCCACCCGTTGTGCAAGGCACTGAGAG
GCCACGGGTGCCAAAAAGAAGGGCCGTTTGAAATGCGGCAACTTCATTCA
TTGGTGGAAATTTGATAAACAGTAGCCTAGATATCCAAGCTCAAAATTTT
AGAAAAAACAAAATTTACTTCAACATACAAAGTTCTAAAATTATAGAGCT
TGGTCTCCCTAGAGAATGAAAGTGCAAACCCATGTTTCCAAAACTTTTCT
AGCCAACCCAGGGCAGCAAAACAGAAATTAATAAAAAGCAGCCTTACAAG
ATCTAAAACCATTTGAAACAGCCAAAGATTACACCAGAGTCCATGAACAA
GTTTGCATGCATTATCATGACCAACCATGTTTTCTTGAAAAATGAACTTG
CCTCTGTTTTCTTCTTTTTCATGTTTTCATGTTACAGAAAGTTCTATCTT
CACTAGCAAGTGGAGGACTATCCTATTTTTGCTTCAGAATTATTGCTCCG
CGCCGTGTCGATCGGCCCTTACGGCTTTAGCGACGTGAGCGCAAGCAAGC
GGATTGCATTCTCATATGGAGAATGCAAATCGCTCTAGGGAGACCAGGCT
GCTTTCGTTTTTGTTACAGATTTCGATATAAACTTCTCTCAGGGATTACT
TGTGCTTGTCAATGAACATGTACACATGTCTGTGTTGTTTCAACTTGTCA
GCACTGTATTGTTGTAAAGGAAAAGATTTAAAAGAGGCAAGACTAGCCTA
GTTTATCTAATCCTGATAATAGGAGTTTAAGTTTAGACTGTAAGCCCCCG
GGGCCACTTATAGCTTTTTTTTAGACTGGATGGCTGGCCCACTTTTGATT
CTTTGGCTTTGCTTGAGGTGGTAGCAAATCCACTAGATCCATTCCCCTTT
TGGCAAAAAAAACAATACTTTTGTTATTGTTACTTGCCGTCAACTGCTCT
AACTTGGGACAGTTGGTCAAAACATGGGATTGTTGTCGTTGATATCTCGA
CTATATTTTTACTTTTAGGGGCCACTCACATATCAATTTTTCCCACTCTG
ACGCTAATTAAAAAACCTAGCCACCCTTAGCGTCATATTATACCGTGAAG
TCAGGTAACTTCAGGGTTGCTACGTCTACCTGAAATGTCTAGAATTAAAT
TACAGTCTGGAAATGTCTGGAAAAAGTCTGGAATTGGCATACCTGTCTGG
AAAAATATGGAATTTGAAGGAAATAGTCCTGAATGAAGTCCAGTAAACTT
TTCGGAAATAGGAAACTTTCATCTTGGCATTTGAAATTCCCAAAAATTTC
TGCTCCCTTCACTCGCAACCAATACTGTAAATCATGCTCATTTTGACATT
TGTCATTCTGTTGTGTTCATCAATATGGCCGTTCAAATGACTGTTAAGGA
AAAACTAAAAACCTTCCTAATGGATAAAATGTCTGGGGAAAATATTACCT
ATTTGGCTAAAATGTCTAGAAAATTTTCGACATTTTCAGGTAAAAAATCT
GGAAAAATATGGCTTTTGTTTTGAGACTAAAAGTCTGGAATTTTCAACTT
CGCAAACCTGTAGCAACCCTGAACTTGCATCAGTGGAGGGAAACATGCAT
GGCCATGACTCCGCTTGCAGCTCTACTCTACCATTTTTATTTTTATTTAA
AGGGGAACTCAACAAATTTTGTATTTTTTCGTTTCTATCCTGAAATGGTT
TGTTTCAACAATAAATTTCAAAATTTCAAGATTGCAACTCTCCTTTCACT
CTAAAAATATGTTTGATGAGCTTTTAAAAAATGGCTCCCCTCTACTAAAA
TGAATTATTTTATATCAAATAAAAAAGACGCGCTTTCAGCTGTTTTATGA
CGTAGCTGTATTCAGAATGCCGAAGATGCTTATCTTCTCAGGCTAAAAAT
TAGTGAAGACAGGCCTTTCTGTAGAGGGTTTGTGACAAAATTTTTGTGTT
TCTTGTTGGATTTTTTATTGTTATTCAGCTAAATCACCCACAATTTACCA
GGAATACTTTTCTATGTATTTATTTCTTATTTAAAACAGAACTCTGAAAA
CATACTGTAGCCATAACTGAATTTGTTCTGTTTTCTGAATACTGTGACGT
CATAATCCAAAGAGAAGTCGATCTTTTTTTAAAAGAAAGGGGGTGATTTT
TTTAACATATTTTTAACTGAAGTTAAGAGTGATTTATCATGATTTTTATT
TGAGAGATCGGACTAAAATACTTTCTTTCTCAATTTTATACTTAATATTA
CCAAAAATCAGGAAAAAAATGAAAATGACAAATTTGTTGAGTTCCCCTTT
AACTTTGTATTTTAATGACCAGCCAGGTCATTCATTTAAGGGCTATGCAT
GTTTGCCTCCACTGATGCAAGCTACCCGATATCACGGTAACATATATCGA
AAATCGATGAAAACCTTTTTTTCCTTTCTCACTTCGGGTATTCATGTTCC
ATTGCCAGAGAAGTTGCTTCCCCCCTTCTGCTTGGTATCGTGAGTGGTCC
TAAATCCGACAGCCCTGCCTAAATCCGATGGGGTCTTTCGAAGATACAAA
CTAAAATGAAAACAAATCTTTCGCTGTGACGCAATGAAGATACCAAACTG
TCAACTAAACTGAAAGATTTGATACACTGAACCAATGGAATCAAATAATA
ATAATTGCTTCTTATACAAAACAAAATTTTTATTATATACAAAATTGTTA
ACATTTTAAGGTATATAATTATTTTTGCAACTCACACTTTTTTGATCACA
TTAATTGACATCTTGACATTATAGTCATCTTGTTAGACGTTTTGTTTTGA
GATTTCTTGCAATAGTTTATTGTTCAACTTAGAGAGGGAATGTTTGTAAA
CATAGAATTTTTTTCATAGCAGTTATTTGGGGGGTCAGATTTAGGCAACG
GCTGTCGGATTTAAGACCACTCTGGGTACATTTTAGTAGTGGTCTCGGTA
TATGACTTTTACACAGATTGGTTCTCAGACCCGCATAAGTTATGACGTGA
CTTTTAACATAATGAGCATCTCCGGCATTTTACTATGTACAAGTTTATTC
TCGATGCCGTGAAAAAAAGATAAATTTGGCATGAGGATTTTGAGGCTGCT
ACTAGAAAAATGATAGTATGAAAGTTAATTTTCTGGAAATTTGAACATCT
GTTGGGCCTCGAAAATCGATATCTCTAGTAGGTTTTCTTAGCATCACTCG
ATCTAACCCACCCACCCTATAGTGTTGGAATGAAAGCGTGGGAAAAATCG
ATATGTGAGTGGCCCCTTACTGTAAAATCACTTTGACAACAAATTTGTTT
TTTTCCACCAAGTTTATCAACCACACTACTTCTTCTGTCATTCATATATC
ACAAAAATAGATATGTCTAGAAATGTTGCAAAAGTATAACCATTCACATC
ATCTTTTAAGTCTTGCTCTCTCAAGGGGCTTTTATCTAATAGGCTGTGCC
ATGAGATGAATATATGTCAGCAAGAGCCTGTTTTATATGATTTAGTTGAT
GTAAGCGGACTTGAATCGCTCAATAAAATTTAGCGCATAGAAACCACCCC
CGCTTAAAGTTAACAGATATGAAAATACGACGCTAGATTTTATGAATTTT
TGTAGATATCTATGTTGCAGAGTGCGCTTACACTCGCACGTGTTTCACTA
GTAGGAATTTTTTTCATATTTTGATGTAAAAGCCTACTTAGAGAAATCAT
ATATTATGTAATACGTCGTTCATTTAACTCGAATCAAATAGGTGCAGTGA
AATAGTGGCCGAATTGCCATCCCATGTTTTCTCAGATAGTCCCAAGTTAG
AGCAGGTTGACCGTATTTGCCGTGTGAGTAATTTTGGCAGAATCCCGGGT
GAATAAAACAGCATGGTGTTGGATAATAAAGATTAGGTGATATACATTAT
ACCACCCGCAAATTTTGTAAATCAGGTTTGTTTTGATTTAACTTTGTATT
TTAATGACCAGCCAGGTCTTCATTTGAGGGTTATGCATGTTAGCCTGCAC
TGATGCAAGTTCAGGCAGAGCTTCCTTGTTTTTTTTTAACATTTGTTCGG
ATAGAATAAAAACATACCTGATCAACACAAACAAACAACTTTCGCTTTTG
CTTATGTAGGTTTTAAAACCCACAAGTAATGAACCTCTTATAGCTTTATC
TGAATAAATCTGATTGAAAACCTTCTGTCAGGTTTCATTCCATACGTTTT
TTATCCACATGGTGACCCGGTTTACCCAAGGTAGAACTAAACATAGAAAG
GGGGTAATTTTAGTGGTCTATACGATCATTGGTATATTTTTTGAATTTTT
GGTTTGGATTTTTCTACCCAGAACCGTTGCTATGAACGTGCGTCATGTTG
CTAAAACCTTTGCTTGAAATCGAAAGCAAACCAAAATAATTTAGCGCACA
CTGCCGTTCGCGTAATATTGATAAAGTGAAAGGAAGTCCTGACTGAAGTT
ACCCGATCTCGGGTATATATACTACCGAGATAATTAATTACAGGAATTTT
GTGAACAAATTTAGAAATTATCTCCATTATTTTGAAAAAATAAACTAAAA
TCAAGATGGCTTATGAAACAGCAATGAAGGCAGTTTTTCATCGATTTTCA
GGGATTTCAGCTTTTAAAACATCTTTTAACGCTTTTCAAACCTAAAATCG
ATTTATGAGTGACCCCTTATCATTACGCCAAAATGTTTGCGTATTATTTT
AGACATAAACTTAAAAATCACCAGTGAAGGTACAAGAACAATCCTTATTT
GGCTGACCGTAAATTATTCTCCTGGGAATAACAGGGCAAAATGATCAAAT
CAAAACATTATTCTGGACCCCCTGATTTACAGTGGCTTTTACTAACGTGT
TGCACTCGACCTTTTGTGTCAAAACAGGGGTTTTAATATTTTCTTGCACG
GGAAGGAATGTGTCTGCTTTCAATTTGTGTGTTTTGAAACTTTGGTGTGT
GTACATTCCAGCTCCAAAATATAAGTTGGTTGTTCCACAAAGGTCAGAAA
TGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNCATGGCGTTTTGATTGGTCAATGCAACATTTTTTT
CTTACAAGTTACGTCATGCTCTATTATTCTGTTTGCAAAAATGGATTCGA
ATTTTACATCCAGGTTTTTTTAATGGCTAGATAAGAGATCGAATCATCGC
ACAGAATTGATGCTGCACTTTTTTTTTTGTCATCTAAAAAATGAAGTCGT
TGCATTGTTTTTCGCGCAAGTTCTATTTTCTGCAAATCAAATTGCGTCAC
GCATTCGAAAGATTCGAAAATGTTGCAATCAAAACATTGAATTCATTCAG
TCATTTGTGAGTTTGGTTTTGAGAAGAAAACATTTTCTGAAAATTAAACC
TAAAATATTGTTATCATATTTTGAAAAGACTTTGAAAACAGAAAGTTATA
AAATTTATTACATTGAGATATGGTTGTAAGAGGTATGTATGTATGGAAAT
GGAATGCTTTGTTTGCTTCAGTTTTCACTACATACTTTCCTCCCCTCGAA
ATTCAGTTTTCGATGGGAGCCTTTATTTATCTAAACTTTGATTTTATTAA
TGGTGATTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGATTTGTAAAATAAAGGG
ATTTCTTTTTCGAAATTGCGCTTCCATTGAAACGTGAAGTTAAAATTGAC
GTTACAGCATTTGAAAAAAGATATAACTTCAAGGCAATGAAAAATCGATG
AAAATTGGATTACAACCTGTACTTTTTTATTTAGCATTTTTTAGCATTTT
TTATCCCCTTTCACTTGCGATGGGTGGGAAAATTGTCCAAAACAAACAGC
CGAATTTAACCGAAAACCATTTTACCGAAATTCNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTCGAATATAGGAGATTAAATAGTCGAAGCTATTCGACTAAACGA
CGGCAGCTATTCGATTAAATAGTCGAATCATTAATCGAACTTAATAATCG
AAAATCAATTATATTTTTGAGAAGATCCCTTAATTCCGCAAATAGGCATA
ATTTTCGTGGGGCTTTGCCCCATAGACCACACCAGGACTGTCCTGGACCA
GTTGGTTGGGCTGTTTACAAGGCCCCAGACCTCCTGTCTGCTTTTTTCAA
GCCTAAGGCACATTCTGAAACTCAATCTTTTGATTAAAAACGGTAGCAGC
TCCAAATCCTGGAAATTTGCCTGTTGTCATATCTTGACTTTGGAAAAGAC
TGGAAAAAAATATTAGGAGCTTCTGCTCAGGACCATGACAAAATGTCTCA
ATCTATCTGATTATTCCTTAAGCAAATTGAATTATGTGGTGCAACTGATA
TATTTGTTACTTTATTAACCAACCTTACTGAACTTTTTTAGGTTAGTATA
TAACAATTTAGATAAGCATGGAGGGTCAAGTAAGCCAAACCATTTACATT
AATAATCTCAATGAGAAGATTAAACAAGAAGGTATGACATTTTATCAATA
TTTGATCAATTTTGGTTAACCTTGAAAACAAATGAAATTATGAAAATCCT
TTTTTATGTTGTCATCATTATTGAATTACCATTAAGTCTATTTTCCTTAT
TATTTGGCTAATTTCATCCACATATTTTTGAGTGTATGTGTGACTTCCCT
ATTGATTTTGAGTACCTGAAAATCAGACCAGTCTTAAGACAGTCTTTTAA
GGGGCGGTAAATGACTGGGAAAATTTACCACAAGTCTATTTCGAAGCATC
CAGTCCCAGACTGGATTTTACCGGCCACAACCAGTCAAACAAGCGAGCCC
TGAGCATCTACAAGCAATCAGGACAATTTGAAATCAGATTTTCTTGAAGG
TCTGAAGGTGGATCTAAAACAAAAGTTTTGACTGCTATTTGACTGCTTGA
ATACCATACTAAGACCAGTCTGATTTCCAGATATTTTATATTGCTTGGGA
AGTCACATACTTGATAAATAACTTAGAATTGTTCAAAGTGGAAGTTGAAA
GTTTTACCTTAATACAAAACTGACAGCTGGCAAGGACTTCAACAATTAAG
ATAATCCAAAATCAAATGCTCCACAATTTTCTCATTTCAGAGGTCAAGAA
ATCATTGGAAGCAATGTTTAGCCAGTTCGGGACAATCTTGGATGTTGTTG
CAATGAAAACATTGAAAATGAAAGGACAAGCTTTTGTAGTTTTTAAAGAT
GCAAGCAGTGCGACACAAGCAATGCGCTCTATGCAAGGGTTTCCTTTTCA
CGATAAACCATTGGTACTTCATGTTTAATTTCTTTTCTTATAACAATAAT
TAAATATTCAAATTTTTAGGGGTTTGTTTCGGACATGCAAGCTCTTTTTT
ATTACCCATTTTATATTTTTAAAAATCTAAACACCAAATTTTGTACTTTT
GGTTTGGAAAGCCTAGTTTCTATAACTTTGTAGTTTACTCAATTTAAAAA
CTCAAATTGTTCAGTTCAATTTGTAATGATGATAATAATGACAATAATGT
CTTGTCTTCATTTTAGAGGATAGCATACGCTAAATCTAAATCAGATGTAG
TTGCAAAGATGGACAACACTTTTGTTCCAAGAGACAAGAAGAAGAGGAAG
GCTGAAGAAGGTACATTTAAAAAAAATTAACCAGGAAATGTTATTTTCAG
GAATGTTTTCTTCTTTATTCTTTATCAGATCAAGAGGAAGTAAATCAGGT
ATAACAGAAGCTAAATTTTTTGGAAATATCCAGTACAACAATTGTCATAG
CAGCTGTAAACCCTGTAATGTGCTTACAGTATGTAAGTGAAGTTTTTATT
ATGATTAATGACTGTTTCTATCTTAAAAACTCTATTTTTTTGTCTTGCAG
CCAAGAAGAAACTTCAAGCTATTGCTGCAAAACAAGCTAAAATGCAAAAC
CAGTTCAATCCTATGATGCAGCCTGGTGGTTAGTCCATAATGATTTCAAA
TAGAATTTCTTACCTAGTTTTCATCTTATTATTAAGTCTCACTCACAGAA
AAACTTCTTAAACTTAAACTTAATGGATTGATTTGGATGAATTCATTTTA
AGATTAAAATTTTCTCTTTTTCATGAGAGCATTTTTTCAAAATATTTTGT
TTCAGTCAACCCTTACCAAGCAATGGGACAACCACAACAGCAACAAATGC
CAGCCGTTGAACCTCCACCAAATCATATTTTATTCTTGTCTAATTTACCA
AATGAAACCACCCAACTTATGTTGTCAATGCTCTTCCAACAGTAAGCCTT
TAGAAATGAACTTTTTCGACGATCTTGCCGTTCCCTTTCTTTTAATATTA
AAAATTCCTGACAGAATCACATTAATTAGAAAAGGTAGATATTCAAATAT
TTATTGCTTAAAGAATCCATCTTCCGTTGATCATGATCTTCTTCTAAAAT
GGTTTACTTCCGCAAAATTAGTAGTATGAGCTTAGGGATGCGCAAAAAAC
TGTTAGCAAGTAATGTCTAGGATCATTATTTGTGAAGTGTTAGATCTAGT
TTAGGTCTTACATATTTTTCTCATTTTATATTAATTTTCTCACCTATATT
CATCTGGCTTAATAAAAATCTTTCAATAGGGTTCCTGGTTACAGAGAAGC
TCGTCTTGTCAACGGAAGACACGATATTGCATTTGTTGAATTTGAAAATG
CTGACCAAGCAAAACGAGCTAAAGAACAATTGAATGGTTACAAGATCAGT
CCCTCGCATCCTATGGTTATTACTTACGCTAAGAAATAGGTTGAAACTAT
TGGGCTATATGGAATGGGATACTTGTGCAGAGTAGATTCTATTTTGTCTG
TCACGCTTTTTTAAAAGATGTGATGTGCCATATAATGTACATAATTTTGG
AAAGCAATTACCACTCTGCCTTTTTCTGGTTGGCACGAAACACAGCGAAA
CAAATGAATTGGTAACATTGATGGCACTGACCTCTATAAATGCGACGTGT
CAGGATGTGTTTCAAATTGTAGTTTTTCACTTGCTGCATTGCACTTCGCT
CAAGTGAGAAACACTCCCTCTTGAAAAAGGTTATTGAAAACATTTCATTA
CGGGTTGGTTCTATTAAACCCTTGGCATGGTCAAGAAAAAGCGTGGGTTG
TGAACTGAAATATCCTAAAAACAATTATAGCAAAACAAAGCTCCCTTTTT
GTTAAAAACAATGAAGGGTTTGTTTCCAGCTTGAGCTGAAGTGTATATCT
GGCAACATTTTAATGGTGTTTTTGTGTAGAAAATATTTTTACAATTTTAA
ATTTTTTAATGAAAATAAAATTTTATTGAAAACTCCTTCCAC

Coding sequence (CDS) from alignment at scaffold_8:491360..507151-

>TCONS_00072579 ID=TCONS_00072579|Name=TCONS_00072579|organism=Clytia hemisphaerica|type=CDS|length=4230bp|location=Sequence derived from alignment at scaffold_8:491360..507151- (Clytia hemisphaerica)
GGTTCCTGGTTACAGAGAAGCTCGTCTTGTCAACGGAAGACACGATATTG
CATTTGTTGAATTTGAAAATGCTGACCAAGCAAAACGAGCTAAAGAACAA
TTGAATGGTTACAAGATCAGTCCCTCGCATCCTATGGTTATTACTTACGC
TAAGAAATAGTCAACCCTTACCAAGCAATGGGACAACCACAACAGCAACA
AATGCCAGCCGTTGAACCTCCACCAAATCATATTTTATTCTTGTCTAATT
TACCAAATGAAACCACCCAACTTATGTTGTCAATGCTCTTCCAACACCAA
GAAGAAACTTCAAGCTATTGCTGCAAAACAAGCTAAAATGCAAAACCAGT
TCAATCCTATGATGCAGCCTGGTGAGGATAGCATACGCTAAATCTAAATC
AGATGTAGTTGCAAAGATGGACAACACTTTTGTTCCAAGAGACAAGAAGA
AGAGGAAGGCTGAAGAAGAGGTCAAGAAATCATTGGAAGCAATGTTTAGC
CAGTTCGGGACAATCTTGGATGTTGTTGCAATGAAAACATTGAAAATGAA
AGGACAAGCTTTTGTAGTTTTTAAAGATGCAAGCAGTGCGACACAAGCAA
TGCGCTCTATGCAAGGGTTTCCTTTTCACGATAAACCATTGATGGAGGGT
CAAGTAAGCCAAACCATTTACATTAATAATCTCAATGAGAAGATTAAACA
AGAAGGGTTCCTGGTTACAGAGAAGCTCGTCTTGTCAACGGAAGACACGA
TATTGCATTTGTTGAATTTGAAAATGCTGACCAAGCAAAACGAGCTAAAG
AACAATTGAATGGTTACAAGATCAGTCCCTCGCATCCTATGGTTATTACT
TACGCTAAGAAATAGTCAACCCTTACCAAGCAATGGGACAACCACAACAG
CAACAAATGCCAGCCGTTGAACCTCCACCAAATCATATTTTATTCTTGTC
TAATTTACCAAATGAAACCACCCAACTTATGTTGTCAATGCTCTTCCAAC
ACCAAGAAGAAACTTCAAGCTATTGCTGCAAAACAAGCTAAAATGCAAAA
CCAGTTCAATCCTATGATGCAGCCTGGTGAGGATAGCATACGCTAAATCT
AAATCAGATGTAGTTGCAAAGATGGACAACACTTTTGTTCCAAGAGACAA
GAAGAAGAGGAAGGCTGAAGAAGAGGTCAAGAAATCATTGGAAGCAATGT
TTAGCCAGTTCGGGACAATCTTGGATGTTGTTGCAATGAAAACATTGAAA
ATGAAAGGACAAGCTTTTGTAGTTTTTAAAGATGCAAGCAGTGCGACACA
AGCAATGCGCTCTATGCAAGGGTTTCCTTTTCACGATAAACCATTGATGG
AGGGTCAAGTAAGCCAAACCATTTACATTAATAATCTCAATGAGAAGATT
AAACAAGAAGGGTTCCTGGTTACAGAGAAGCTCGTCTTGTCAACGGAAGA
CACGATATTGCATTTGTTGAATTTGAAAATGCTGACCAAGCAAAACGAGC
TAAAGAACAATTGAATGGTTACAAGATCAGTCCCTCGCATCCTATGGTTA
TTACTTACGCTAAGAAATAGTCAACCCTTACCAAGCAATGGGACAACCAC
AACAGCAACAAATGCCAGCCGTTGAACCTCCACCAAATCATATTTTATTC
TTGTCTAATTTACCAAATGAAACCACCCAACTTATGTTGTCAATGCTCTT
CCAACACCAAGAAGAAACTTCAAGCTATTGCTGCAAAACAAGCTAAAATG
CAAAACCAGTTCAATCCTATGATGCAGCCTGGTGAGGATAGCATACGCTA
AATCTAAATCAGATGTAGTTGCAAAGATGGACAACACTTTTGTTCCAAGA
GACAAGAAGAAGAGGAAGGCTGAAGAAGAGGTCAAGAAATCATTGGAAGC
AATGTTTAGCCAGTTCGGGACAATCTTGGATGTTGTTGCAATGAAAACAT
TGAAAATGAAAGGACAAGCTTTTGTAGTTTTTAAAGATGCAAGCAGTGCG
ACACAAGCAATGCGCTCTATGCAAGGGTTTCCTTTTCACGATAAACCATT
GATGGAGGGTCAAGTAAGCCAAACCATTTACATTAATAATCTCAATGAGA
AGATTAAACAAGAAGGGTTCCTGGTTACAGAGAAGCTCGTCTTGTCAACG
GAAGACACGATATTGCATTTGTTGAATTTGAAAATGCTGACCAAGCAAAA
CGAGCTAAAGAACAATTGAATGGTTACAAGATCAGTCCCTCGCATCCTAT
GGTTATTACTTACGCTAAGAAATAGTCAACCCTTACCAAGCAATGGGACA
ACCACAACAGCAACAAATGCCAGCCGTTGAACCTCCACCAAATCATATTT
TATTCTTGTCTAATTTACCAAATGAAACCACCCAACTTATGTTGTCAATG
CTCTTCCAACACCAAGAAGAAACTTCAAGCTATTGCTGCAAAACAAGCTA
AAATGCAAAACCAGTTCAATCCTATGATGCAGCCTGGTGAGGATAGCATA
CGCTAAATCTAAATCAGATGTAGTTGCAAAGATGGACAACACTTTTGTTC
CAAGAGACAAGAAGAAGAGGAAGGCTGAAGAAGAGGTCAAGAAATCATTG
GAAGCAATGTTTAGCCAGTTCGGGACAATCTTGGATGTTGTTGCAATGAA
AACATTGAAAATGAAAGGACAAGCTTTTGTAGTTTTTAAAGATGCAAGCA
GTGCGACACAAGCAATGCGCTCTATGCAAGGGTTTCCTTTTCACGATAAA
CCATTGATGGAGGGTCAAGTAAGCCAAACCATTTACATTAATAATCTCAA
TGAGAAGATTAAACAAGAAGGGTTCCTGGTTACAGAGAAGCTCGTCTTGT
CAACGGAAGACACGATATTGCATTTGTTGAATTTGAAAATGCTGACCAAG
CAAAACGAGCTAAAGAACAATTGAATGGTTACAAGATCAGTCCCTCGCAT
CCTATGGTTATTACTTACGCTAAGAAATAGTCAACCCTTACCAAGCAATG
GGACAACCACAACAGCAACAAATGCCAGCCGTTGAACCTCCACCAAATCA
TATTTTATTCTTGTCTAATTTACCAAATGAAACCACCCAACTTATGTTGT
CAATGCTCTTCCAACACCAAGAAGAAACTTCAAGCTATTGCTGCAAAACA
AGCTAAAATGCAAAACCAGTTCAATCCTATGATGCAGCCTGGTGAGGATA
GCATACGCTAAATCTAAATCAGATGTAGTTGCAAAGATGGACAACACTTT
TGTTCCAAGAGACAAGAAGAAGAGGAAGGCTGAAGAAGAGGTCAAGAAAT
CATTGGAAGCAATGTTTAGCCAGTTCGGGACAATCTTGGATGTTGTTGCA
ATGAAAACATTGAAAATGAAAGGACAAGCTTTTGTAGTTTTTAAAGATGC
AAGCAGTGCGACACAAGCAATGCGCTCTATGCAAGGGTTTCCTTTTCACG
ATAAACCATTGATGGAGGGTCAAGTAAGCCAAACCATTTACATTAATAAT
CTCAATGAGAAGATTAAACAAGAAGGGTTCCTGGTTACAGAGAAGCTCGT
CTTGTCAACGGAAGACACGATATTGCATTTGTTGAATTTGAAAATGCTGA
CCAAGCAAAACGAGCTAAAGAACAATTGAATGGTTACAAGATCAGTCCCT
CGCATCCTATGGTTATTACTTACGCTAAGAAATAGTCAACCCTTACCAAG
CAATGGGACAACCACAACAGCAACAAATGCCAGCCGTTGAACCTCCACCA
AATCATATTTTATTCTTGTCTAATTTACCAAATGAAACCACCCAACTTAT
GTTGTCAATGCTCTTCCAACACCAAGAAGAAACTTCAAGCTATTGCTGCA
AAACAAGCTAAAATGCAAAACCAGTTCAATCCTATGATGCAGCCTGGTGA
GGATAGCATACGCTAAATCTAAATCAGATGTAGTTGCAAAGATGGACAAC
ACTTTTGTTCCAAGAGACAAGAAGAAGAGGAAGGCTGAAGAAGAGGTCAA
GAAATCATTGGAAGCAATGTTTAGCCAGTTCGGGACAATCTTGGATGTTG
TTGCAATGAAAACATTGAAAATGAAAGGACAAGCTTTTGTAGTTTTTAAA
GATGCAAGCAGTGCGACACAAGCAATGCGCTCTATGCAAGGGTTTCCTTT
TCACGATAAACCATTGATGGAGGGTCAAGTAAGCCAAACCATTTACATTA
ATAATCTCAATGAGAAGATTAAACAAGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045039XLOC_045039Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072579-proteinTCONS_00072579-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072579-exon-scaffold_8-1575043694:507035..507151TCONS_00072579-exon-scaffold_8-1575043694:507035..507151Clytia hemisphaericaexon
TCONS_00072579-exon-scaffold_8-1575043694:494171..494260TCONS_00072579-exon-scaffold_8-1575043694:494171..494260Clytia hemisphaericaexon
TCONS_00072579-exon-scaffold_8-1575043694:493389..493561TCONS_00072579-exon-scaffold_8-1575043694:493389..493561Clytia hemisphaericaexon
TCONS_00072579-exon-scaffold_8-1575043694:493042..493135TCONS_00072579-exon-scaffold_8-1575043694:493042..493135Clytia hemisphaericaexon
TCONS_00072579-exon-scaffold_8-1575043694:492724..492801TCONS_00072579-exon-scaffold_8-1575043694:492724..492801Clytia hemisphaericaexon
TCONS_00072579-exon-scaffold_8-1575043694:492411..492546TCONS_00072579-exon-scaffold_8-1575043694:492411..492546Clytia hemisphaericaexon
TCONS_00072579-exon-scaffold_8-1575043694:491360..492072TCONS_00072579-exon-scaffold_8-1575043694:491360..492072Clytia hemisphaericaexon
TCONS_00072579-exon-scaffold_8-1510915933:507035..507151TCONS_00072579-exon-scaffold_8-1510915933:507035..507151Clytia hemisphaericaexon
TCONS_00072579-exon-scaffold_8-1510915933:494171..494260TCONS_00072579-exon-scaffold_8-1510915933:494171..494260Clytia hemisphaericaexon
TCONS_00072579-exon-scaffold_8-1510915933:493389..493561TCONS_00072579-exon-scaffold_8-1510915933:493389..493561Clytia hemisphaericaexon
TCONS_00072579-exon-scaffold_8-1510915933:493042..493135TCONS_00072579-exon-scaffold_8-1510915933:493042..493135Clytia hemisphaericaexon
TCONS_00072579-exon-scaffold_8-1510915933:492724..492801TCONS_00072579-exon-scaffold_8-1510915933:492724..492801Clytia hemisphaericaexon
TCONS_00072579-exon-scaffold_8-1510915933:492411..492546TCONS_00072579-exon-scaffold_8-1510915933:492411..492546Clytia hemisphaericaexon
TCONS_00072579-exon-scaffold_8-1510915933:491360..492072TCONS_00072579-exon-scaffold_8-1510915933:491360..492072Clytia hemisphaericaexon
TCONS_00072579-exon-scaffold_8-1491911889:507035..507151TCONS_00072579-exon-scaffold_8-1491911889:507035..507151Clytia hemisphaericaexon
TCONS_00072579-exon-scaffold_8-1491911889:494171..494260TCONS_00072579-exon-scaffold_8-1491911889:494171..494260Clytia hemisphaericaexon
TCONS_00072579-exon-scaffold_8-1491911889:493389..493561TCONS_00072579-exon-scaffold_8-1491911889:493389..493561Clytia hemisphaericaexon
TCONS_00072579-exon-scaffold_8-1491911889:493042..493135TCONS_00072579-exon-scaffold_8-1491911889:493042..493135Clytia hemisphaericaexon
TCONS_00072579-exon-scaffold_8-1491911889:492724..492801TCONS_00072579-exon-scaffold_8-1491911889:492724..492801Clytia hemisphaericaexon
TCONS_00072579-exon-scaffold_8-1491911889:492411..492546TCONS_00072579-exon-scaffold_8-1491911889:492411..492546Clytia hemisphaericaexon
TCONS_00072579-exon-scaffold_8-1491911889:491360..492072TCONS_00072579-exon-scaffold_8-1491911889:491360..492072Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_8supercontigscaffold_8:491360..507151 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.3815	12.7124	80.2046	104.679	156.455	124.965	78.7883	83.3971	67.0914	70.304	59.4338	49.5157	36.0459	38.2769	45.1751	49.9126	68.8839	68.3136	21.5461	20.8911	46.1004	44.4249	54.9427	50.4473	36.2055	40.241	38.6075	28.2671	40.4346	39.8839
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
Blast
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BLAST of TCONS_00072579 vs. Swiss-Prot (Human)
Match: RU2B (U2 small nuclear ribonucleoprotein B'' OS=Homo sapiens GN=SNRPB2 PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 1.044e-68
Identity = 119/234 (50.85%), Postives = 161/234 (68.80%), Query Frame = 3 
Query:  144 MEGQVSQTIYINNLNEKIKQEEVKKSLEAMFSQFGTILDVVAMKTLKMKGQAFVVFKDASSATQAMRSMQGFPFHDKPLRIAYAKSKSDVVAKMDNTFVPRDXXXXXXXXXXXXXXXXXXXXXXMQNQFNPMMQPGVNXXXXXXXXXXXXXXXXXXXXNHILFLSNLPNETTQLMLSMLFQQVPGYREARLVNGRHDIAFVEFENADQAKRAKEQLNGYKISPSHPMVITYAKK 845
            M+ + + TIYINN+N+KIK+EE+K+SL A+FSQFG ++D+VA+KT+KM+GQAFV+FK+  S+T A+R +QGFPF+ KP+RI YAK+ SD+++KM  TF  ++KKK K +    +  A    +   Q         G                  + PPN+ILFL+NLP ET ++MLSMLF Q PG++E RLV GRHDIAFVEFEN  QA  A++ L G+KI+PSH M ITYAKK
Sbjct:    1 MDIRPNHTIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQAFVIFKELGSSTNALRQLQGFPFYGKPMRIQYAKTDSDIISKMRGTFADKEKKKEKKKAKTVEQTATTTNKKPGQ---------GTPNSANTQGNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPGRHDIAFVEFENDGQAGAARDALQGFKITPSHAMKITYAKK 225
The following BLAST results are available for this feature:
BLAST of TCONS_00072579 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RU2B1.044e-6850.85U2 small nuclear ribonucleoprotein B'' OS=Homo sap... [more]
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