TCONS_00072509 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072509
Unique NameTCONS_00072509
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1063

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072509 ID=TCONS_00072509|Name=TCONS_00072509|organism=Clytia hemisphaerica|type=transcript|length=1063bp
caaaacaagacatttagtttttttgaaatccaGAAGAAAAGTTGTTCAGA
AAACATCGATCATACCACGGATAGGAAAAACGTAGCCCACACTTTTTGCA
GCTCAActtatcttttaaaCAGTGAATCCAAAATAATGAAACAAATGTGA
ATTAAATGTCATGGAGAAATATGGCCACCGCATAACATATCCTTACAACA
TAAGTGAACATCAACATTACGCAGGTGATGGCCACCATTTCATCGGAGAC
GGTCACGAACATGATTTATCTAAAGCTCTTGAAGCACGGCGTAGGTTTCT
GATGattgGTGGTATTCTTCTCTCGGTAATTTGTGGAGTAGGAATCATCT
TCCTGATTATCACTCACATCCTCAGtcgaagaaaaatcaaaaagatgaCC
ACAAAACCAAAGAAACACATCATTCTTAGACGCCGGCCTAATGGCGCCGG
AGGTGGTGGTCAGGCGAATCGAAATCAATCTGGATTTTTAATGATGACAT
AACACATGACGATGGCttgtttgaaaatgtgatttcgAATCTTTCAGAAT
CTTAGTGATTTAGTCATTTCGGTAATGCTGGCTTGGCTGGCAGATCTTTG
AAAATTAATCAGAACTAATTGATAAACCAGTCGTAACATGACTCATTATT
GAGTGGGCGTTTGCCACTAGTTTTATTgtgtaaattcaaaaaaatgtagC
AAAACACCCGGTCTTTTTTGGGTGCATCAgtataaaacattacatcatga
atatcatacaATATTATTATTGGTAATGGTTGTAGATGTATGGTTGATAT
CGAAAAAGATGTAacattgaaaatgatatttaTGACTTAAATCTCACTGT
AACATTTTATGATAAATTTGTaacacaacaaaaacaaaaaatagctttac
aactcGCAAATTGAGCAGTTACGCGTTTTTGCTTCCAAAGATGATGCTTA
AATTTGGAAGAGCTTTGAGACTTTGGCGACCACTAAACCCGATGTGTATG
ATTATGTATTACATACAAAATCGATAGCTTGAAGATCAAGTGTTGGAGAC
TATTCCTGATTGT
Run BLAST on NCBI

protein sequence of TCONS_00072509-protein

>TCONS_00072509-protein ID=TCONS_00072509-protein|Name=TCONS_00072509-protein|organism=Clytia hemisphaerica|type=polypeptide|length=113bp
MEKYGHRITYPYNISEHQHYAGDGHHFIGDGHEHDLSKALEARRRFLMIG
GILLSVICGVGIIFLIITHILSRRKIKKMTTKPKKHIILRRRPNGAGGGG
QANRNQSGFLMMT
Run BLAST on NCBI

transcript from alignment at scaffold_78:227762..237077-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072509 ID=TCONS_00072509|Name=TCONS_00072509|organism=Clytia hemisphaerica|type=transcript|length=9316bp|location=Sequence derived from alignment at scaffold_78:227762..237077- (Clytia hemisphaerica)
CAAAACAAGACATTTAGTTTTTTTGAAATCCAGAAGAAAAGTTGTTCAGA AAACATCGATCATACCACGGATAGGAAAAACGTAGCCCACACTTTTTGCA GCTCAACTTATGTAAGTTTTATATGAGTTACCTAATTCTTCATACTTTAC ATTTTTACATTACATTCGCTAGAATCGAGTTTTCACAATCAATTCTTCCG CGGGGGGCGGGGTAATGTAGAAAACGTAACACGTCAAAATAGTACCACGT CATTGTATTTCGCTTCAGCTTGCGCATGCATGGAGACAAAAATGGCTGTA ACTTTGGATAGAATTCGAATCAAGTTACGGAATATTATCAAGCAAAGAAA AACAGGAAAAATGAAAATGAAAAATGAAGAAGAAAATAATAAACTTCTTG TAGAAATGTGGTATGATTACCATTTTCGCAGGAGTGATTCTTCAATCTTA GATCACCATTATTGTGAAAAAAAAATTCAAAAATATTCATTCAATCAAAA GATATCAAACAAAAATTATTGCTGGTGATAAAGCAGTAAAAAACAACAAA AAACAGCCTTTCGTCAATCAACCAATAACAAACTTTGTTTGATATCTTTT GATTGAATACATATTTTTGAAAAAATTTTCACAGTGATGATGGTCAAATA TTGAAGAATTTCACTCCTGTGAAAATGGTAATCATACCACATTTCTACAA GAAGTTGATTTTTTTCTTCTTCATTTTTCATTTTCATTTTTCTTTATTTT TAATTTTTTTTTGCTTGATAATATTCCACTCAAAAATATCTTTTCAACGA GCACAAAATCGCAACTTCATTCAAATTCTATCAAAAGTTACAGCCATTTT TGTCTCANAAGAATTTCACTCCTGTGAAAATGGTAATCATACCACATTTC TACAAGAAGTTGATTTTTTTCTTCTTCATTTTTCATTTTCATTTTTCTTT ATTTTTCTTTTTTTTTTTGCTTGATAATATTCCACTCAAAAATATCTTTT CAACGAGCACAAAATCGCAACTCCATTCAAATTCTATCAAAAGTTACAGC CATTTTTGTCTCAGCTGCAAATTATTTTGAGACAGACTTTATGTCGTAGT CCAGCAAGCTAGACGACTAATTCAGACATAGTAGAAATAAAGCAAAAAGT ATTGGGAGGGAACAATTTTAGTTTATACAAACTAAATCCCGTAACAATAA TCGTATTATCATATAACGCCTATACTACTGTATTACACGCATTATAAACG ACTCCTGTCTAACTATGTCGTTGAATTTGCTTTCCAGACTATTCTCCAAC GATATTTTAAGTTTTTTAGGCTAGAGAATGCTGGGTAATATGCGAACTGA ATCCCTCCAACAACACCAGCAGAAGAAAAATTCGGCTTAAAAAGTGCGGA AATACTTAGATATGTTTTGCTAGTATCTTAACTCTAGTCCCCATTAGAGA GACTTAGGGAGGTGACAATCACTATATGGAGGGACTAATTTAATTTTTTG TTGTTTTACTCCATTAGAAGGCCTAAAACCGACTTTTTCGCCTTTTTTCG CCCACATAACCCATTTCCCTACGTTCCCTATCGCGCTAAAAGCTACCCTG AGTATCAGAGGCCAAGTTTTCAAAGAGAAAATATTAATTTATTCGAGCTG TGATACTCACGGTAGCAAAAAGGCTGTTTGTTTTTCAAAAGTTTCCATTT GCCATGAATTGCCATGAAGTCTTTTTGATTACCCACGTATTGTTATAAAT AATGCATGCTCTTTTCAATGTTGCTACTTTTGAATGAGTTCTTTCCATGC TTAACTCTCTGCAATATTGCTTGCTCAGCAAAATGATCAAAACACGACAA TCAAGGGTGATCATACCCCAAAAAGTACTCCCGCCATAGGCGTAGCGAGA TACCCTGCAAAGTTTATGAGGGAGTGCAGACGTTTATGACATATTCATCA TCTTTTGATAAAACAAAGACAATTATTACAGTGTCGTAAAAACCGCTCTC ATCCATAAATTTTGCAGGGTATCTCGCTACGCCTATGGCGGGAGTACTTT TTGGGGTCTTCACCCTTGATTGTCGTGTTTTGATCATTTTGCTGAGCATG CAATATTGCAGAGAGTTAAGCGTGGAAAGAACGTTGCATTTTGAAAATGG CTGAAATGATTAATTTACTCTGGCATAGAAACCGAAAGATCTTGTGAAAG GAAATGCAAACAGTCTACACTTCTAGTCTCAAAATGTTTTTATGTCCACG TTGTATATTGACTGATGGAAAAGTGTGTTGTTTTTTTTACTTTTTTGACA TCTTTTCTCAGTTTATTCCAACTGTGATTCAAATAAACTCGACTGTGCTG TTATATGGGGTACCCTTTTGTTTTATTGGAACACTCACAGCAGGGTGTAG AGAGAAAAACAAACTTCCCAAAAAAAATTTGCTTTTTGTCTTCCTTCTTC TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT CTTCTTCTTCTTCTTCTTTGTGATAAAAAAGCTAGTAGTTTATTTTAGAA AGTGAATTTAGAAAGTAATTTTAGGCAGTGACATCGTGAAAAAAACTTTC CTAGAGGGCTAAAGCTTTCCTTTCTTTCTAGAAATGATACCCCTATATTT ACGAAATGGTGTGGCCCCGCTTGAATAATTTTGAATGGCGTAAATTGTTT CTGAATGAATTTCTTTTCAAGGGGGTCTATTGTAAATCGTATTACGTTAC CTAAAGCCGGTCTCCACTTTCTCGCGAAAACTTTTTGTCAATCGTTTTTG CCTGAACAAAAAAAATTACATTATCAAAAAAGTTTTGAGCAAAAAAAATT AAAAGTCAGATTTTCCCGATGGAATTGCTTCATTTTTTCAACCGTTCAAT GACCTTACAAAACCATTAAAAAGTTTTCGTTCATTTCGCGCGAAAGTGAG GAAGACTGAATTTGATTATTTCATGATAGAGATTCGAAATTTTGGTTTTC AGCTTAATAATAAATTGGTTTGATTGTAATTCAATTTTGTTGTTTTTTCG TTTTTTCGGCCGTTTTTCAAAAAACGTTTATAGGTTCTCTTTTTTTCTGT TCTTCAATTTTCACCTCCATTTCAAACATGGATAACATTTTTTGATAGCA TAATGAGGTTCTTTATTCCTTTGTTGTTTTCTGCAAGAATTTAATCCCCT AAGGATTTATTCGTATCAACGATAGCAGTTTTTGTTTCGCTGTAGTCACT GAGCTTTATATATCCCTGGACAAAGTCTCTTAATCCCGGCGAAGCAAAAT CTTAGATTGGAGTTTCTTGAAAAGTGGTACCCTAATGGTAGCACTACTCA ATAGCGGTGTAAATGCTTCGAAAGCGCTAGGTCTACTTTTATTCCTCGAA CAATTTTTATGATGTAGCGCCGTTTGACTTTTTTTAACACTGCGATGGTT TCTTAGCGGGTACCAATTCAAAAAAAACTCCGATCACAGATACCGGATGT AGCTTGGTTCAAGGATATATAAAGGTCAGTGACTGCAGTACACGGGTTTC GAATAGGTTTTTAACTTTGGCTTCGTGTAAATTACACGAAAAATTATTAA GTAAATAAACTCTCATTGGTTAAAAAAATGCACACATTAACTATCCGATC AGAGAGAGATATTTTAGGCGTTGCTTACACTGTAAAATTGAGATAATCAC CTTGGTGATTGTTTTAAAACGAGACTGGTGTAATCTTTTGAAAATGTCTT TCGATCTATGATAAGGGAGTGTTCAGACTGAGTTTTGAAAATAGCATTTC GAGGAAGGGAAACTCAAATCAAGAGAAAATATGAAGAGATCGTTATCAAT AAGTTTCTTCAATTTCCGATATCCCTTTTCAAGTTCTACAATACCATATG TCTTCGCTGTTGTTGGAAATATGAAATCTTATCTTTCCTACTTCTTTGAT GTCTGTTTTTCATAATTCTTATTCTAAAAATTTCTTTAAGAATGGATGAA AATTCAATTTTTGGAAGAATAAGCTTCCAATCAATCCTTTTGAGCATAAT ATGGCTTTATGATAGACTTGTCTGATCTGGTCTTCGTAATGTTTCTTTTT CATTTCTTATCTGTGTTTTTCAGTCTCGATATTTATCACCGGGGGGGGGG GCACTCGATTCAAAAACTACCCTACGTGCGGCCCAAGATTAGGCCTTTGA AATCAGACCCTTGCAGAGAAAATTTAGCCAAATTTGATTAAATTTGGGCG AAAAATCTAACCTTACGTACGTTCTTTTGAAATTCTTTGACCATCTTAAG ACAAAATATGGTTGGATTTTTAAATTTTATACCCTTAGAGTGAACTCATT CTCATCTTTACTCATTTCGACGCTTACAATGCACTTGCATGGTAGCAGGA AGCTTCGAAAAAGGGCTGCACGTACAGTGGGTCATTTACCTTGGGTGCCC CCCCCCCTGGGTATTTTATCCGTTTTGTTTTAAAATTATAGTTAACTTCA CTACCAATAAACAGGGTTGTAATACACGCTTTTATGGGAACGGTGTTTTT TATAAAATCATGGATATTCTTAACTTTTTGGGGAAAATTGTGCTAAGATA TTTTTGCAGTATTCTTAGGTTAGGGTAGAAATTTAACCTAAATTAAGCAT ATAATACCTACCTGAAGCAAAAAGTGGCATTTTTGTGAAAGTATTGAGCC TTACTTTGAAATATTTGGTAATTTATAGTTAAGAATGCTCCAATATGGCA TTCTAAGGTTTTGAAATTCCATGATGTAGTGATATTCTTAGCATTAATTT GTAACTTAATTTTTCGGCCAATTTCATACTGAATCTTCTGTCAGAGTATA TTCTTATAAAGAAAAGCGTGTACTCGAATCTGAGATCTATTTGAACTTCC TCATTCTTTTTCACACTCCTATAGTTATTTTTTCTTCAACTTTTGACTGC TAATTATTTTTTGTTTTTGTTAATGAAATACACGTTTTTTTTATAAAAAC ATCCAAAATTTTTGAAGCCTTCGGATGTTCTTAACTTTTTGAATTTTAAA CCTAAAAATATTCTTCACAACTTTCACCATTTTGTGAGTAATTTTGCATA TTTTCATAAGAAATTGGGTGGTTAAGAGTCCGCAAAGCCTTAAAATGTTC TTAACTTGTTCTTAAGATTTTGGCCATGGAAGCCTTAGGTTCTTATATAG TTTGTTCTTATAAAAAAACGTGTAGTAAATTATACCTAATGAACTCCAGT TGGGCTGTGGACCCTTCTTTGATCACAGCATGAAATAAACAAACAAAATA TTGATGTTTTTTATTAGAACCAGTATTAGCTTCTCAATTTTCCAGGATGA ATTTCATGCTTAAATATTCCTGATTGGCTGAAACGGCAGTATTTTGCTTC ATTGTTCTAAACTTATTTTGGCTAACAAATTTTTTGTCTAAATTTGACTA GGCTAATTCCATACACCTTTTCGACACTTTATTATTATTTAATTTACCAC CCTAAACTCGATCCAATTTTTTTTTTACACTTTTTTCTGTTGTCTTTAGG TGCGAAATAAGACTGGGACGGTTTTAGGGTGGTAAAATGGACAAGAAAAT GCCTGCGTGGCAATTGGTGGCTACGGTCGAAAAGGTGCATTGGCGAAAGA AACATATTTAAATGAACGTTCCATTGCGCATTAAGACCAATACACCTTTT CTTAAATTATGTCACAAGCAACACTTACCTTGTTTTCAAAATATTGCTAT GGTAATTGGTTCCAAGAGGAGTTCATAAAAGGTTTACTCTATTTATAAAA GTAACACTTTAAGGTTTTAAAATTTAAGGGATTAAATCACCTTGGTAATA ATTGTAAAACAAGGCAGTGGTTGCACTTTAAGTATTTTATGAACAGGCCT ATATACGATATGATAAAAAGCTAAAATGATGATTTTTCTTATAAAAATGT TTCTTGGTCCCTTGGATCTTTTTCTTCTACTTTAATGACTTTATGAAAAT AAAAATCCTTTCTATCAATAGAGCGCCTCTGGAGTCTAAATTAATTAGAT ATATTAAGGCGCTATACTTATCATAGAAAGCCCCCCAAAAACCCTAAAAT TAATACATTTATCGCTATTCTTGTATTCTAATAAATGGTGAGAAAAATAA AAGAGGAAAAGTTAGTCCAAGAGAAAGGTTTGATGATATTTTCGTTGTAA GAAGCGTATGAGCTTCAGTAATAAGAGAATGCAGGGGTATAGAGGGTGCC TTTACAATAACATAACTACTTTTTTTCAAGTCACATGAAAAAGTTTTCAG AAGTAAAAAAATGTGACAGTATTTCAAGGTGTGGAATGCCGTTGTTAGCA GAAGAAGCGGGTTGTCGTTTTCAGAAGGCGAAAGAAGTAGAAAAGGTTGG AGCGTCTCCCCAATAGCAAAATAACTTTTTATCAAGTTACCTGAAAAGTT GTCATGTCTTGTTTAGTAGGACAGAACAGTGAATTATCAAGCATTGCATT CTTTAAATAACAAAGATCCATTAATACAACTAGATAAATGCTCCCTGGTT GTTTATTAGAGAAAATGATTGAATTTTTTTCGTACGATTTCTGGTACAAT TCACAAGTGAAGACTCTTGTTTTGAGAGGATTGGTGAACCAGTATTGAGT ATCAAAGTAACCCTATCTTACAGTCCAAATGGAACTTTTTCCCATAGCGG GGATAAAAATCTCTATAGAAATCCTAATGGCAATGGGGATAGAAATCCTA TTGTTCTAAGCAAAAAATTCCAGTAGATTTTTACAATACAGTAACTATGT TTTTCATGAAAATCTGCTCACTCTCACAAACTTTGCGCCATTTGGAAATC AATGTAAAGAATCGAACTCCGAAACCATCCCAATTTTTTGCTTGGAACAA TAGGATTTCTATCCCCATTGCCATTGGGATTTTAATAGAAATTGATATCC CCACTGTGGGAAAAGTTTCCACCTTGAATGTGAGACAGGGGTGCTACTTG ATACTCAATACTGGTCAAACTGGTTCACCAGCCTTCTCATCACTAGAGTC TTCACTCTTGTCTACGCTACTGGTCTCTACGATATCAAGCACTTGGCTGC ATAGTATCTAACATACTGCCACTGTAATCAATATTCTTCATTTTTCAGCT TTTAAACAGTGAATCCAAAATAATGAAACAAATGTGAATTAAATGTCATG GAGAAATATGGCCACCGCATAACATATCCTTACAACATAAGTGAACATCA ACATTACGCAGGTGATGGCCACCATTTCATCGGAGACGGTCACGAACATG ATTTATCTAAAGCTCTTGAAGCACGGCGTAGGTTTCTGATGGTAAGGGAT TGAATTTTGCTGTTTGTATAAGTTGTTTCCATAACTAGAACACGCATGGG AGACTTAAATTTGTTCGAGTTTTGGAAATTTCGAGTTATGGAGTACGGTT TATAAGGCATTGTTAACTGAAGGGACCATAATTCGCGGCGAATTGAAGAC AGTATTGTATGACTGTAGGAGATTAATTCCCAAAAAAATGATCATAATAG GACGCAGCTCTAATGTGAAGTAAGGCGCAAATAACCAACTCTCCCAAAAT CGTACCCAGTCCCTTAGCTCGCTTTTTTTATCATTCTGAACGCGCTCACG ATTGTATCACGTCTATCAGTAAAATTAAAAAGTGGTACAATTGTCTGAGG GTAAGAGATTGCAATTCGCCTGCATGTGAATAAAAATTTTTGGAAATGCT TTGTGCATTTAAAAAATTGGTGCAAAGGTTATTTGTTACTCTTAGGTTCC AAATAACGGGGGGGGTTCGAATAAACGAGGAGGCTGGAAAATCTTCTGGA ATTTCTTCCATTGAAGGTTACAGCCTCTATAAATAGGCTGCTCGCTGGAG TCAAAAAACATCCATTTTTTGCTGGTTTTTAACTCCAATGGAAGCCTTTC TATGACCTATAACTTCACTTTGTCCTAGAACATGTCGATCAAGAGAGGGG TCTCGGAGTGATTATCGAAATCGAATTAAATTTCGAAGAGCGCATCTACA CCAAGATCAAGAAGGCTAACTCAATCGTTGGTTTGATTAAGAGAAGCTTC GACTTCCGACTTCCTTTCTCCCGAGATACTTCGCACACTTTTCATTGCAT TTGTGAGATCTCACCTTAAGTACGCGCAAGCAGTTTGGTCTCCACGGCTG ATCAAACACTCTAATGCAATTGAAAGTGTTCAACGCAGGGCCACAAGACT TATCGGTGGTTATATAGAAACTATTCATACGAAGAACGTCAAAATGTCAT GAACCTACTCTGTCTTAAGGACCGGCGTAAAATCGGGGATATGATGAAAG TATACAAGCATCTTAATGNAATAAATAACAAATCCGACGTCATTTATCGG TATTTTTGATTTTAAAGGTTCATTAGCCTAAAAGTCTAAGCTAAAGCGCT ATATTGTCGTTAGACGTGTGTCTTAGCTTTGTAAATACGAGCTTAGTTAA CTAGGGTATAGATACATCATCAGTTGTTTTTCACCATACTTTCACTTTCA TTTTCAGATTGGTGGTATTCTTCTCTCGGTAATTTGTGGAGTAGGAATCA TCTTCCTGATTATCACTCACATCCTCAGTCGAAGAAAAATCAAAAAGATG ACCACAAAACCAAAGAAACACATCATTCTTAGACGCCGGCCTAATGGCGC CGGAGGTGGTGGTCAGGCGAATCGAAATCAATCTGGATTTTTAATGATGA CATAACACATGACGATGGCTTGTTTGAAAATGTGATTTCGAATCTTTCAG AATCTTAGTGATTTAGTCATTTCGGTAATGCTGGCTTGGCTGGCAGATCT TTGAAAATTAATCAGAACTAATTGATAAACCAGTCGTAACATGACTCATT ATTGAGTGGGCGTTTGCCACTAGTTTTATTGTGTAAATTCAAAAAAATGT AGCAAAACACCCGGTCTTTTTTGGGTGCATCAGTATAAAACATTACATCA TGAATATCATACAATATTATTATTGGTAATGGTTGTAGATGTATGGTTGA TATCGAAAAAGATGTAACATTGAAAATGATATTTATGACTTAAATCTCAC TGTAACATTTTATGATAAATTTGTAACACAACAAAAACAAAAAATAGCTT TACAACTCGCAAATTGAGCAGTTACGCGTTTTTGCTTCCAAAGATGATGC TTAAATTTGGAAGAGCTTTGAGACTTTGGCGACCACTAAACCCGATGTGT ATGATTATGTATTACATACAAAATCGATAGCTTGAAGATCAAGTGTTGGA GACTATTCCTGATTGT

Coding sequence (CDS) from alignment at scaffold_78:227762..237077-

>TCONS_00072509 ID=TCONS_00072509|Name=TCONS_00072509|organism=Clytia hemisphaerica|type=CDS|length=684bp|location=Sequence derived from alignment at scaffold_78:227762..237077- (Clytia hemisphaerica)
ATTGGTGGTATTCTTCTCTCGGTAATTTGTGGAGTAGGAATCATCTTCCT
GATTATCACTCACATCCTCAGTCGAAGAAAAATCAAAAAGATGACCACAA
AACCAAAGAAACACATCATTCTTAGACGCCGGCCTAATGGCGCCGGAGGT
GGTGGTCAGGCGAATCGAAATCAATCTGGATTTTTAATGATGACATAAAT
GGAGAAATATGGCCACCGCATAACATATCCTTACAACATAAGTGAACATC
AACATTACGCAGGTGATGGCCACCATTTCATCGGAGACGGTCACGAACAT
GATTTATCTAAAGCTCTTGAAGCACGGCGTAGGTTTCTGATGATTGGTGG
TATTCTTCTCTCGGTAATTTGTGGAGTAGGAATCATCTTCCTGATTATCA
CTCACATCCTCAGTCGAAGAAAAATCAAAAAGATGACCACAAAACCAAAG
AAACACATCATTCTTAGACGCCGGCCTAATGGCGCCGGAGGTGGTGGTCA
GGCGAATCGAAATCAATCTGGATTTTTAATGATGACATAAATGGAGAAAT
ATGGCCACCGCATAACATATCCTTACAACATAAGTGAACATCAACATTAC
GCAGGTGATGGCCACCATTTCATCGGAGACGGTCACGAACATGATTTATC
TAAAGCTCTTGAAGCACGGCGTAGGTTTCTGATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044992XLOC_044992Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072509-proteinTCONS_00072509-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072509-exon-scaffold_78-1575043694:236967..237077TCONS_00072509-exon-scaffold_78-1575043694:236967..237077Clytia hemisphaericaexon
TCONS_00072509-exon-scaffold_78-1575043694:229737..229929TCONS_00072509-exon-scaffold_78-1575043694:229737..229929Clytia hemisphaericaexon
TCONS_00072509-exon-scaffold_78-1575043694:227762..228520TCONS_00072509-exon-scaffold_78-1575043694:227762..228520Clytia hemisphaericaexon
TCONS_00072509-exon-scaffold_78-1510915933:236967..237077TCONS_00072509-exon-scaffold_78-1510915933:236967..237077Clytia hemisphaericaexon
TCONS_00072509-exon-scaffold_78-1510915933:229737..229929TCONS_00072509-exon-scaffold_78-1510915933:229737..229929Clytia hemisphaericaexon
TCONS_00072509-exon-scaffold_78-1510915933:227762..228520TCONS_00072509-exon-scaffold_78-1510915933:227762..228520Clytia hemisphaericaexon
TCONS_00072509-exon-scaffold_78-1491911889:236967..237077TCONS_00072509-exon-scaffold_78-1491911889:236967..237077Clytia hemisphaericaexon
TCONS_00072509-exon-scaffold_78-1491911889:229737..229929TCONS_00072509-exon-scaffold_78-1491911889:229737..229929Clytia hemisphaericaexon
TCONS_00072509-exon-scaffold_78-1491911889:227762..228520TCONS_00072509-exon-scaffold_78-1491911889:227762..228520Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_78supercontigscaffold_78:227762..237077 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.290801 0.121533 0.0470371 0.0460185 0.168069 0.177081 1.49548 1.00004 2.52054 1.47432 0.883862 1.2727 1.74062 1.75027 0.518969 0.455673 1.68405 1.31056 1.81061 2.77269 1.48615 1.70447 1.66713 1.16923 1.20428 1.91074 0.113927 0.18238 0.092219 0.422805
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072509 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top