XLOC_044992 (gene) - C. hemisphaerica

Overview
NameXLOC_044992
Unique NameXLOC_044992
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_78:227762..237077-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044992 ID=XLOC_044992|Name=XLOC_044992|organism=Clytia hemisphaerica|type=gene|length=9316bp|location=Sequence derived from alignment at scaffold_78:227762..237077- (Clytia hemisphaerica)
CAAAACAAGACATTTAGTTTTTTTGAAATCCAGAAGAAAAGTTGTTCAGA AAACATCGATCATACCACGGATAGGAAAAACGTAGCCCACACTTTTTGCA GCTCAACTTATGTAAGTTTTATATGAGTTACCTAATTCTTCATACTTTAC ATTTTTACATTACATTCGCTAGAATCGAGTTTTCACAATCAATTCTTCCG CGGGGGGCGGGGTAATGTAGAAAACGTAACACGTCAAAATAGTACCACGT CATTGTATTTCGCTTCAGCTTGCGCATGCATGGAGACAAAAATGGCTGTA ACTTTGGATAGAATTCGAATCAAGTTACGGAATATTATCAAGCAAAGAAA AACAGGAAAAATGAAAATGAAAAATGAAGAAGAAAATAATAAACTTCTTG TAGAAATGTGGTATGATTACCATTTTCGCAGGAGTGATTCTTCAATCTTA GATCACCATTATTGTGAAAAAAAAATTCAAAAATATTCATTCAATCAAAA GATATCAAACAAAAATTATTGCTGGTGATAAAGCAGTAAAAAACAACAAA AAACAGCCTTTCGTCAATCAACCAATAACAAACTTTGTTTGATATCTTTT GATTGAATACATATTTTTGAAAAAATTTTCACAGTGATGATGGTCAAATA TTGAAGAATTTCACTCCTGTGAAAATGGTAATCATACCACATTTCTACAA GAAGTTGATTTTTTTCTTCTTCATTTTTCATTTTCATTTTTCTTTATTTT TAATTTTTTTTTGCTTGATAATATTCCACTCAAAAATATCTTTTCAACGA GCACAAAATCGCAACTTCATTCAAATTCTATCAAAAGTTACAGCCATTTT TGTCTCANAAGAATTTCACTCCTGTGAAAATGGTAATCATACCACATTTC TACAAGAAGTTGATTTTTTTCTTCTTCATTTTTCATTTTCATTTTTCTTT ATTTTTCTTTTTTTTTTTGCTTGATAATATTCCACTCAAAAATATCTTTT CAACGAGCACAAAATCGCAACTCCATTCAAATTCTATCAAAAGTTACAGC CATTTTTGTCTCAGCTGCAAATTATTTTGAGACAGACTTTATGTCGTAGT CCAGCAAGCTAGACGACTAATTCAGACATAGTAGAAATAAAGCAAAAAGT ATTGGGAGGGAACAATTTTAGTTTATACAAACTAAATCCCGTAACAATAA TCGTATTATCATATAACGCCTATACTACTGTATTACACGCATTATAAACG ACTCCTGTCTAACTATGTCGTTGAATTTGCTTTCCAGACTATTCTCCAAC GATATTTTAAGTTTTTTAGGCTAGAGAATGCTGGGTAATATGCGAACTGA ATCCCTCCAACAACACCAGCAGAAGAAAAATTCGGCTTAAAAAGTGCGGA AATACTTAGATATGTTTTGCTAGTATCTTAACTCTAGTCCCCATTAGAGA GACTTAGGGAGGTGACAATCACTATATGGAGGGACTAATTTAATTTTTTG TTGTTTTACTCCATTAGAAGGCCTAAAACCGACTTTTTCGCCTTTTTTCG CCCACATAACCCATTTCCCTACGTTCCCTATCGCGCTAAAAGCTACCCTG AGTATCAGAGGCCAAGTTTTCAAAGAGAAAATATTAATTTATTCGAGCTG TGATACTCACGGTAGCAAAAAGGCTGTTTGTTTTTCAAAAGTTTCCATTT GCCATGAATTGCCATGAAGTCTTTTTGATTACCCACGTATTGTTATAAAT AATGCATGCTCTTTTCAATGTTGCTACTTTTGAATGAGTTCTTTCCATGC TTAACTCTCTGCAATATTGCTTGCTCAGCAAAATGATCAAAACACGACAA TCAAGGGTGATCATACCCCAAAAAGTACTCCCGCCATAGGCGTAGCGAGA TACCCTGCAAAGTTTATGAGGGAGTGCAGACGTTTATGACATATTCATCA TCTTTTGATAAAACAAAGACAATTATTACAGTGTCGTAAAAACCGCTCTC ATCCATAAATTTTGCAGGGTATCTCGCTACGCCTATGGCGGGAGTACTTT TTGGGGTCTTCACCCTTGATTGTCGTGTTTTGATCATTTTGCTGAGCATG CAATATTGCAGAGAGTTAAGCGTGGAAAGAACGTTGCATTTTGAAAATGG CTGAAATGATTAATTTACTCTGGCATAGAAACCGAAAGATCTTGTGAAAG GAAATGCAAACAGTCTACACTTCTAGTCTCAAAATGTTTTTATGTCCACG TTGTATATTGACTGATGGAAAAGTGTGTTGTTTTTTTTACTTTTTTGACA TCTTTTCTCAGTTTATTCCAACTGTGATTCAAATAAACTCGACTGTGCTG TTATATGGGGTACCCTTTTGTTTTATTGGAACACTCACAGCAGGGTGTAG AGAGAAAAACAAACTTCCCAAAAAAAATTTGCTTTTTGTCTTCCTTCTTC TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT CTTCTTCTTCTTCTTCTTTGTGATAAAAAAGCTAGTAGTTTATTTTAGAA AGTGAATTTAGAAAGTAATTTTAGGCAGTGACATCGTGAAAAAAACTTTC CTAGAGGGCTAAAGCTTTCCTTTCTTTCTAGAAATGATACCCCTATATTT ACGAAATGGTGTGGCCCCGCTTGAATAATTTTGAATGGCGTAAATTGTTT CTGAATGAATTTCTTTTCAAGGGGGTCTATTGTAAATCGTATTACGTTAC CTAAAGCCGGTCTCCACTTTCTCGCGAAAACTTTTTGTCAATCGTTTTTG CCTGAACAAAAAAAATTACATTATCAAAAAAGTTTTGAGCAAAAAAAATT AAAAGTCAGATTTTCCCGATGGAATTGCTTCATTTTTTCAACCGTTCAAT GACCTTACAAAACCATTAAAAAGTTTTCGTTCATTTCGCGCGAAAGTGAG GAAGACTGAATTTGATTATTTCATGATAGAGATTCGAAATTTTGGTTTTC AGCTTAATAATAAATTGGTTTGATTGTAATTCAATTTTGTTGTTTTTTCG TTTTTTCGGCCGTTTTTCAAAAAACGTTTATAGGTTCTCTTTTTTTCTGT TCTTCAATTTTCACCTCCATTTCAAACATGGATAACATTTTTTGATAGCA TAATGAGGTTCTTTATTCCTTTGTTGTTTTCTGCAAGAATTTAATCCCCT AAGGATTTATTCGTATCAACGATAGCAGTTTTTGTTTCGCTGTAGTCACT GAGCTTTATATATCCCTGGACAAAGTCTCTTAATCCCGGCGAAGCAAAAT CTTAGATTGGAGTTTCTTGAAAAGTGGTACCCTAATGGTAGCACTACTCA ATAGCGGTGTAAATGCTTCGAAAGCGCTAGGTCTACTTTTATTCCTCGAA CAATTTTTATGATGTAGCGCCGTTTGACTTTTTTTAACACTGCGATGGTT TCTTAGCGGGTACCAATTCAAAAAAAACTCCGATCACAGATACCGGATGT AGCTTGGTTCAAGGATATATAAAGGTCAGTGACTGCAGTACACGGGTTTC GAATAGGTTTTTAACTTTGGCTTCGTGTAAATTACACGAAAAATTATTAA GTAAATAAACTCTCATTGGTTAAAAAAATGCACACATTAACTATCCGATC AGAGAGAGATATTTTAGGCGTTGCTTACACTGTAAAATTGAGATAATCAC CTTGGTGATTGTTTTAAAACGAGACTGGTGTAATCTTTTGAAAATGTCTT TCGATCTATGATAAGGGAGTGTTCAGACTGAGTTTTGAAAATAGCATTTC GAGGAAGGGAAACTCAAATCAAGAGAAAATATGAAGAGATCGTTATCAAT AAGTTTCTTCAATTTCCGATATCCCTTTTCAAGTTCTACAATACCATATG TCTTCGCTGTTGTTGGAAATATGAAATCTTATCTTTCCTACTTCTTTGAT GTCTGTTTTTCATAATTCTTATTCTAAAAATTTCTTTAAGAATGGATGAA AATTCAATTTTTGGAAGAATAAGCTTCCAATCAATCCTTTTGAGCATAAT ATGGCTTTATGATAGACTTGTCTGATCTGGTCTTCGTAATGTTTCTTTTT CATTTCTTATCTGTGTTTTTCAGTCTCGATATTTATCACCGGGGGGGGGG GCACTCGATTCAAAAACTACCCTACGTGCGGCCCAAGATTAGGCCTTTGA AATCAGACCCTTGCAGAGAAAATTTAGCCAAATTTGATTAAATTTGGGCG AAAAATCTAACCTTACGTACGTTCTTTTGAAATTCTTTGACCATCTTAAG ACAAAATATGGTTGGATTTTTAAATTTTATACCCTTAGAGTGAACTCATT CTCATCTTTACTCATTTCGACGCTTACAATGCACTTGCATGGTAGCAGGA AGCTTCGAAAAAGGGCTGCACGTACAGTGGGTCATTTACCTTGGGTGCCC CCCCCCCTGGGTATTTTATCCGTTTTGTTTTAAAATTATAGTTAACTTCA CTACCAATAAACAGGGTTGTAATACACGCTTTTATGGGAACGGTGTTTTT TATAAAATCATGGATATTCTTAACTTTTTGGGGAAAATTGTGCTAAGATA TTTTTGCAGTATTCTTAGGTTAGGGTAGAAATTTAACCTAAATTAAGCAT ATAATACCTACCTGAAGCAAAAAGTGGCATTTTTGTGAAAGTATTGAGCC TTACTTTGAAATATTTGGTAATTTATAGTTAAGAATGCTCCAATATGGCA TTCTAAGGTTTTGAAATTCCATGATGTAGTGATATTCTTAGCATTAATTT GTAACTTAATTTTTCGGCCAATTTCATACTGAATCTTCTGTCAGAGTATA TTCTTATAAAGAAAAGCGTGTACTCGAATCTGAGATCTATTTGAACTTCC TCATTCTTTTTCACACTCCTATAGTTATTTTTTCTTCAACTTTTGACTGC TAATTATTTTTTGTTTTTGTTAATGAAATACACGTTTTTTTTATAAAAAC ATCCAAAATTTTTGAAGCCTTCGGATGTTCTTAACTTTTTGAATTTTAAA CCTAAAAATATTCTTCACAACTTTCACCATTTTGTGAGTAATTTTGCATA TTTTCATAAGAAATTGGGTGGTTAAGAGTCCGCAAAGCCTTAAAATGTTC TTAACTTGTTCTTAAGATTTTGGCCATGGAAGCCTTAGGTTCTTATATAG TTTGTTCTTATAAAAAAACGTGTAGTAAATTATACCTAATGAACTCCAGT TGGGCTGTGGACCCTTCTTTGATCACAGCATGAAATAAACAAACAAAATA TTGATGTTTTTTATTAGAACCAGTATTAGCTTCTCAATTTTCCAGGATGA ATTTCATGCTTAAATATTCCTGATTGGCTGAAACGGCAGTATTTTGCTTC ATTGTTCTAAACTTATTTTGGCTAACAAATTTTTTGTCTAAATTTGACTA GGCTAATTCCATACACCTTTTCGACACTTTATTATTATTTAATTTACCAC CCTAAACTCGATCCAATTTTTTTTTTACACTTTTTTCTGTTGTCTTTAGG TGCGAAATAAGACTGGGACGGTTTTAGGGTGGTAAAATGGACAAGAAAAT GCCTGCGTGGCAATTGGTGGCTACGGTCGAAAAGGTGCATTGGCGAAAGA AACATATTTAAATGAACGTTCCATTGCGCATTAAGACCAATACACCTTTT CTTAAATTATGTCACAAGCAACACTTACCTTGTTTTCAAAATATTGCTAT GGTAATTGGTTCCAAGAGGAGTTCATAAAAGGTTTACTCTATTTATAAAA GTAACACTTTAAGGTTTTAAAATTTAAGGGATTAAATCACCTTGGTAATA ATTGTAAAACAAGGCAGTGGTTGCACTTTAAGTATTTTATGAACAGGCCT ATATACGATATGATAAAAAGCTAAAATGATGATTTTTCTTATAAAAATGT TTCTTGGTCCCTTGGATCTTTTTCTTCTACTTTAATGACTTTATGAAAAT AAAAATCCTTTCTATCAATAGAGCGCCTCTGGAGTCTAAATTAATTAGAT ATATTAAGGCGCTATACTTATCATAGAAAGCCCCCCAAAAACCCTAAAAT TAATACATTTATCGCTATTCTTGTATTCTAATAAATGGTGAGAAAAATAA AAGAGGAAAAGTTAGTCCAAGAGAAAGGTTTGATGATATTTTCGTTGTAA GAAGCGTATGAGCTTCAGTAATAAGAGAATGCAGGGGTATAGAGGGTGCC TTTACAATAACATAACTACTTTTTTTCAAGTCACATGAAAAAGTTTTCAG AAGTAAAAAAATGTGACAGTATTTCAAGGTGTGGAATGCCGTTGTTAGCA GAAGAAGCGGGTTGTCGTTTTCAGAAGGCGAAAGAAGTAGAAAAGGTTGG AGCGTCTCCCCAATAGCAAAATAACTTTTTATCAAGTTACCTGAAAAGTT GTCATGTCTTGTTTAGTAGGACAGAACAGTGAATTATCAAGCATTGCATT CTTTAAATAACAAAGATCCATTAATACAACTAGATAAATGCTCCCTGGTT GTTTATTAGAGAAAATGATTGAATTTTTTTCGTACGATTTCTGGTACAAT TCACAAGTGAAGACTCTTGTTTTGAGAGGATTGGTGAACCAGTATTGAGT ATCAAAGTAACCCTATCTTACAGTCCAAATGGAACTTTTTCCCATAGCGG GGATAAAAATCTCTATAGAAATCCTAATGGCAATGGGGATAGAAATCCTA TTGTTCTAAGCAAAAAATTCCAGTAGATTTTTACAATACAGTAACTATGT TTTTCATGAAAATCTGCTCACTCTCACAAACTTTGCGCCATTTGGAAATC AATGTAAAGAATCGAACTCCGAAACCATCCCAATTTTTTGCTTGGAACAA TAGGATTTCTATCCCCATTGCCATTGGGATTTTAATAGAAATTGATATCC CCACTGTGGGAAAAGTTTCCACCTTGAATGTGAGACAGGGGTGCTACTTG ATACTCAATACTGGTCAAACTGGTTCACCAGCCTTCTCATCACTAGAGTC TTCACTCTTGTCTACGCTACTGGTCTCTACGATATCAAGCACTTGGCTGC ATAGTATCTAACATACTGCCACTGTAATCAATATTCTTCATTTTTCAGCT TTTAAACAGTGAATCCAAAATAATGAAACAAATGTGAATTAAATGTCATG GAGAAATATGGCCACCGCATAACATATCCTTACAACATAAGTGAACATCA ACATTACGCAGGTGATGGCCACCATTTCATCGGAGACGGTCACGAACATG ATTTATCTAAAGCTCTTGAAGCACGGCGTAGGTTTCTGATGGTAAGGGAT TGAATTTTGCTGTTTGTATAAGTTGTTTCCATAACTAGAACACGCATGGG AGACTTAAATTTGTTCGAGTTTTGGAAATTTCGAGTTATGGAGTACGGTT TATAAGGCATTGTTAACTGAAGGGACCATAATTCGCGGCGAATTGAAGAC AGTATTGTATGACTGTAGGAGATTAATTCCCAAAAAAATGATCATAATAG GACGCAGCTCTAATGTGAAGTAAGGCGCAAATAACCAACTCTCCCAAAAT CGTACCCAGTCCCTTAGCTCGCTTTTTTTATCATTCTGAACGCGCTCACG ATTGTATCACGTCTATCAGTAAAATTAAAAAGTGGTACAATTGTCTGAGG GTAAGAGATTGCAATTCGCCTGCATGTGAATAAAAATTTTTGGAAATGCT TTGTGCATTTAAAAAATTGGTGCAAAGGTTATTTGTTACTCTTAGGTTCC AAATAACGGGGGGGGTTCGAATAAACGAGGAGGCTGGAAAATCTTCTGGA ATTTCTTCCATTGAAGGTTACAGCCTCTATAAATAGGCTGCTCGCTGGAG TCAAAAAACATCCATTTTTTGCTGGTTTTTAACTCCAATGGAAGCCTTTC TATGACCTATAACTTCACTTTGTCCTAGAACATGTCGATCAAGAGAGGGG TCTCGGAGTGATTATCGAAATCGAATTAAATTTCGAAGAGCGCATCTACA CCAAGATCAAGAAGGCTAACTCAATCGTTGGTTTGATTAAGAGAAGCTTC GACTTCCGACTTCCTTTCTCCCGAGATACTTCGCACACTTTTCATTGCAT TTGTGAGATCTCACCTTAAGTACGCGCAAGCAGTTTGGTCTCCACGGCTG ATCAAACACTCTAATGCAATTGAAAGTGTTCAACGCAGGGCCACAAGACT TATCGGTGGTTATATAGAAACTATTCATACGAAGAACGTCAAAATGTCAT GAACCTACTCTGTCTTAAGGACCGGCGTAAAATCGGGGATATGATGAAAG TATACAAGCATCTTAATGNAATAAATAACAAATCCGACGTCATTTATCGG TATTTTTGATTTTAAAGGTTCATTAGCCTAAAAGTCTAAGCTAAAGCGCT ATATTGTCGTTAGACGTGTGTCTTAGCTTTGTAAATACGAGCTTAGTTAA CTAGGGTATAGATACATCATCAGTTGTTTTTCACCATACTTTCACTTTCA TTTTCAGATTGGTGGTATTCTTCTCTCGGTAATTTGTGGAGTAGGAATCA TCTTCCTGATTATCACTCACATCCTCAGTCGAAGAAAAATCAAAAAGATG ACCACAAAACCAAAGAAACACATCATTCTTAGACGCCGGCCTAATGGCGC CGGAGGTGGTGGTCAGGCGAATCGAAATCAATCTGGATTTTTAATGATGA CATAACACATGACGATGGCTTGTTTGAAAATGTGATTTCGAATCTTTCAG AATCTTAGTGATTTAGTCATTTCGGTAATGCTGGCTTGGCTGGCAGATCT TTGAAAATTAATCAGAACTAATTGATAAACCAGTCGTAACATGACTCATT ATTGAGTGGGCGTTTGCCACTAGTTTTATTGTGTAAATTCAAAAAAATGT AGCAAAACACCCGGTCTTTTTTGGGTGCATCAGTATAAAACATTACATCA TGAATATCATACAATATTATTATTGGTAATGGTTGTAGATGTATGGTTGA TATCGAAAAAGATGTAACATTGAAAATGATATTTATGACTTAAATCTCAC TGTAACATTTTATGATAAATTTGTAACACAACAAAAACAAAAAATAGCTT TACAACTCGCAAATTGAGCAGTTACGCGTTTTTGCTTCCAAAGATGATGC TTAAATTTGGAAGAGCTTTGAGACTTTGGCGACCACTAAACCCGATGTGT ATGATTATGTATTACATACAAAATCGATAGCTTGAAGATCAAGTGTTGGA GACTATTCCTGATTGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072509TCONS_00072509Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072509-proteinTCONS_00072509-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_78supercontigscaffold_78:227762..237077 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.29 0.12 0.05 0.05 0.17 0.18 1.5 1 2.52 1.47 0.88 1.27 1.74 1.75 0.52 0.46 1.68 1.31 1.81 2.77 1.49 1.7 1.67 1.17 1.2 1.91 0.11 0.18 0.09 0.42