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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072412 ID=TCONS_00072412|Name=TCONS_00072412|organism=Clytia hemisphaerica|type=transcript|length=1471bp
tctggCACACTCGGTATATACAAAAAAATTGTCAGAAactatcttttatt
ttaaatttagtCTAAATTTTGCGTCATTTCAAGCGAGTCCAAGATATTTA
CTGAGACATTTCGGTAGATTGTCCTTCAAGAATTCGTCATGAAAACTTTT
CAAGCAAGCCATTCGTGCCATATGTTTCAAAGACATCTTTAAATGATCAA
AAGGAGAATTCACTTTTACGAAGCGAAGATAAGGGCTTGATAAATACATC
AAACTTGCTGTTGGGTCAAATAGCGCTATTTCCGCCATATGCCAATTAAT
TGAAAAACCGTAAATTTCTTTTCTACAATCGTACCGGATTATCAGTTCTC
CTGATTTGAAGTCGTACAAACAAACCGAATGAAATGGTTGGGAGCCTGCT
TCTGAAGTGACTTGAAGGCCTTCGACAAAAAACTGATCAAAACATCCAAC
GACTTTGTGTAAAATAATATCGTTCCGTCCATGACACAAATTAATTCTTT
TCAATGGGATGACCTCATTTTTATTGTCGACTTGAAAGACCTTTATGCTT
TTTGCCTTTGTGTCAACGTTCTCCAAGAAAATATAGAAGATTGAGTTTGA
CAAatgataaaaatcattaaaattctGAACACCTTCCCTTTCAGAGATTG
TGACTTCATAATCCATAAGGCGATTTCCCTCAAAATCAAAACCATATATC
ATACCATATTCATAATTATGAAGGTAAATTCTCTTAGAATTCATATCTAG
CGATACACCAGAATTATGGAACGCAAACGTTCCGAGTTCGAAGTCCATTT
CAGTGCAACTGCTCAACACAACACGTTGGAGATGTGAAAGTCTTTTTTCG
CCTATTAAAACGATGTCAGCCACAAAATTGTAACCACCAGGAGAAACAAG
CACCATTAAGACGTAACCATATTCTTTGGTTTTCTCCTGCCAAACACTAT
GGATGTAATCAAAAGCTTTATATGATTCCAGTTCAATGACAGAATCCTCC
GTTTCTTGAAAAGTGGTCGATACAATACTTCCTGGAAGAGCACCTAAAAG
GTGTTTCAAGCTTCCACTGTGTAATATTAAAGGCTGGCTCCCATCTTCCA
AAGTCGAAGGCTTCTCAAACACAAACCAACGATTAAACAAAGGATCATAC
GGCAAGTCATATTCATTATAGCGCAAGTCCCATGATGGTAATTGAATTAA
ACTCACTTGTAGTTTATCTGTTTCCTCATTGAATGAATAGACGCTTATGA
TATCGTCACCTGTTTTATCCTCAGCTCCGCAATATACGGTGTAATATTTC
CCAGAGCTGTCGAAGCCACGTATACTTATTTGCTGGGGGCGGTCAAGACC
AGCCCAGATTTCTTTTGTCTCAACACATTCGGTGAGATGAGGTGGTAAGA
ACGATTGACGTGGGTAAGCCaacatttcttttttgaaaatactctgaaca
ttatttcataattattatcac Run BLAST on NCBI transcript from alignment at scaffold_77:188672..190142- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072412 ID=TCONS_00072412|Name=TCONS_00072412|organism=Clytia hemisphaerica|type=transcript|length=1471bp|location=Sequence derived from alignment at scaffold_77:188672..190142- (Clytia hemisphaerica)
TCTGGCACACTCGGTATATACAAAAAAATTGTCAGAAACTATCTTTTATT
TTAAATTTAGTCTAAATTTTGCGTCATTTCAAGCGAGTCCAAGATATTTA
CTGAGACATTTCGGTAGATTGTCCTTCAAGAATTCGTCATGAAAACTTTT
CAAGCAAGCCATTCGTGCCATATGTTTCAAAGACATCTTTAAATGATCAA
AAGGAGAATTCACTTTTACGAAGCGAAGATAAGGGCTTGATAAATACATC
AAACTTGCTGTTGGGTCAAATAGCGCTATTTCCGCCATATGCCAATTAAT
TGAAAAACCGTAAATTTCTTTTCTACAATCGTACCGGATTATCAGTTCTC
CTGATTTGAAGTCGTACAAACAAACCGAATGAAATGGTTGGGAGCCTGCT
TCTGAAGTGACTTGAAGGCCTTCGACAAAAAACTGATCAAAACATCCAAC
GACTTTGTGTAAAATAATATCGTTCCGTCCATGACACAAATTAATTCTTT
TCAATGGGATGACCTCATTTTTATTGTCGACTTGAAAGACCTTTATGCTT
TTTGCCTTTGTGTCAACGTTCTCCAAGAAAATATAGAAGATTGAGTTTGA
CAAATGATAAAAATCATTAAAATTCTGAACACCTTCCCTTTCAGAGATTG
TGACTTCATAATCCATAAGGCGATTTCCCTCAAAATCAAAACCATATATC
ATACCATATTCATAATTATGAAGGTAAATTCTCTTAGAATTCATATCTAG
CGATACACCAGAATTATGGAACGCAAACGTTCCGAGTTCGAAGTCCATTT
CAGTGCAACTGCTCAACACAACACGTTGGAGATGTGAAAGTCTTTTTTCG
CCTATTAAAACGATGTCAGCCACAAAATTGTAACCACCAGGAGAAACAAG
CACCATTAAGACGTAACCATATTCTTTGGTTTTCTCCTGCCAAACACTAT
GGATGTAATCAAAAGCTTTATATGATTCCAGTTCAATGACAGAATCCTCC
GTTTCTTGAAAAGTGGTCGATACAATACTTCCTGGAAGAGCACCTAAAAG
GTGTTTCAAGCTTCCACTGTGTAATATTAAAGGCTGGCTCCCATCTTCCA
AAGTCGAAGGCTTCTCAAACACAAACCAACGATTAAACAAAGGATCATAC
GGCAAGTCATATTCATTATAGCGCAAGTCCCATGATGGTAATTGAATTAA
ACTCACTTGTAGTTTATCTGTTTCCTCATTGAATGAATAGACGCTTATGA
TATCGTCACCTGTTTTATCCTCAGCTCCGCAATATACGGTGTAATATTTC
CCAGAGCTGTCGAAGCCACGTATACTTATTTGCTGGGGGCGGTCAAGACC
AGCCCAGATTTCTTTTGTCTCAACACATTCGGTGAGATGAGGTGGTAAGA
ACGATTGACGTGGGTAAGCCAACATTTCTTTTTTGAAAATACTCTGAACA
TTATTTCATAATTATTATCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072412-exon-scaffold_77-1575043694:188672..190142 | TCONS_00072412-exon-scaffold_77-1575043694:188672..190142 | Clytia hemisphaerica | exon |
| TCONS_00072412-exon-scaffold_77-1510915933:188672..190142 | TCONS_00072412-exon-scaffold_77-1510915933:188672..190142 | Clytia hemisphaerica | exon |
| TCONS_00072412-exon-scaffold_77-1491911889:188672..190142 | TCONS_00072412-exon-scaffold_77-1491911889:188672..190142 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_77 | supercontig | scaffold_77:188672..190142 - |
Blast
The following BLAST results are available for this feature:
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