TCONS_00072386 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072386
Unique NameTCONS_00072386
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1001

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072386 ID=TCONS_00072386|Name=TCONS_00072386|organism=Clytia hemisphaerica|type=transcript|length=1001bp
CGAAACTTGCTGCTGGAGATGAATGGTCGTTTCTTGGTGGTTCGTTGGCA
CAGACCTTTTTCCACTGGTGCAAAAGGAATCAGATATCGCGTGAAATGTG
GTGATATTGAGCGACTGGAAGATGGTGTTCATCTTGGAGGAGCTGTCAAA
GATATTTTAATCGTTAACATTGACCTTGGTGTTGAAGTCAAACCTGGTGA
AATTTCTTGTGAGgtGACCGGAATTTCATCTTTCAATAAAGAAGGAGCAA
CTGTTTCCAAAGCAATCACAGTTCCTTCATCCAGTGATTCAAGCGGAGCG
AGCGGTGAAACGATTGCAGGCGGAGTCATTGGTGGTATTGTGTTTTTGGT
CTTGCTCATTTTGTGCATAGCCGTTATCTATCGAAAGTGGAGAGAACGAA
ATGAGGTTTTGAAAGCAGCTCTGAATACAATCAAACTGATGGAAGGAGGA
TCAGAACCACAAATGCATTGTCGCCGTGAATTGGAACAAAGGATGCGGAA
CATTTATGTTCCATTGCAAGTGTTGTTGAATCAGAATGTCGTTGATTTGG
AGCAAGAAGAGCCAATCTATGAAGAAATCCCCATCTCAGGTTACAATTAT
CCTTACCGTAAACTGAAAAAAGTTCAAGAACTCGGTCAAGGGAATTTCGC
CAAAGTCTCTCAATGTGAAGCTGATGATATCTGTGGAAGACCTGGAAAAA
CTCTGGTGGCTGTTAAACAACTTAAAGATGACATCAAAATAACAGACGAG
AAAGACTTTGAAGATGAACTTGAACTGATGAAAGAATTGAAAGGTTGTAA
AAATGTCATCAGGCTTCTCGGCGCATGCTCTTATCCACGATGTATGATCG
TCGAATACCTCCCTGGGGGAGATCTTCTCTCGTTCATGTTGAAATCACGG
CAATATCGCGCCCAGACGGAGGGTGAAGAGCTCTCACCCACAGGTGGAAG
AGAACCTCAAAAAACACTGGAGGAGATGGAGGAAGCGAGCCCCTATGCAA
C
Run BLAST on NCBI

protein sequence of TCONS_00072386-protein

>TCONS_00072386-protein ID=TCONS_00072386-protein|Name=TCONS_00072386-protein|organism=Clytia hemisphaerica|type=polypeptide|length=333bp
RNLLLEMNGRFLVVRWHRPFSTGAKGIRYRVKCGDIERLEDGVHLGGAVK
DILIVNIDLGVEVKPGEISCEVTGISSFNKEGATVSKAITVPSSSDSSGA
SGETIAGGVIGGIVFLVLLILCIAVIYRKWRERNEVLKAALNTIKLMEGG
SEPQMHCRRELEQRMRNIYVPLQVLLNQNVVDLEQEEPIYEEIPISGYNY
PYRKLKKVQELGQGNFAKVSQCEADDICGRPGKTLVAVKQLKDDIKITDE
KDFEDELELMKELKGCKNVIRLLGACSYPRCMIVEYLPGGDLLSFMLKSR
QYRAQTEGEELSPTGGREPQKTLEEMEEASPYA
Run BLAST on NCBI

transcript from alignment at scaffold_77:517781..522532+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072386 ID=TCONS_00072386|Name=TCONS_00072386|organism=Clytia hemisphaerica|type=transcript|length=4752bp|location=Sequence derived from alignment at scaffold_77:517781..522532+ (Clytia hemisphaerica)
CGAAACTTGCTGCTGGAGATGAATGGTCGTTTCTTGGTGGTTCGTTGGCA
CAGACCTTTTTCCACTGGTGCAAAAGGTTTGATGTCATTcattttcaaaa
cgtttttaaaaGAAGAGCAAttggctctaattagcatatttcaatggtgc
tgaagcaatttggagggtttagaaccggctgggaacaatagttttaacag
aaaaccggtttctaggcctccagagccgcctgggcttacgctgtaagctt
acagcgctgtacttaaggccttaaaacaatatgtaagcttagggaaattc
ctCCATTCCTAAATGTCTTAAGGAAAATTTTACGTACTGTGAAAAAAGCT
TCATGTAGAATTTTTAGTTCATTGTATAAGTTGATGATATTTAAGATAAG
TCTAACAATTTTAGTACACCCCTATGTCTCAAACCTGCTGGGACCCGCTT
TACTAGacaatttggctgaaattttgttcCCGCTCGGAAAAATACGAATA
ATATtttcagcctctccacttttTTGAACtgagaatttctatccccattg
acccattgagattttcatagaaattttcattccaACTGTCGGAAGAAGTT
CCACCGAAGGGCTGTTGTGGTAGATGGTGACCTTTAGGTTTTCAGTAGCT
ATCTATCCGAaaatgataaacattttttaaagattgttgTTTCATCTAAC
CCCGGGCGTTTTCTTTTAGGAATCAGATATCGCGTGAAATGTGGTGATAT
TGAGCGACTGGAAGATGGTGTTCATCTTGGAGGAGCTGTCAAAGATATTT
TAATCGTTAACATTGACCTTGGTGTTGAAGTCAAACCTGGTGAAATTTCT
TGTGAGGTAAGACGATGCAAAATAAATTACATCGAGAATAGCCCACAGTc
cacttaaagtttttttatagactggatggcgcgaataagtggcccggtag
tatacgataatatgcttttgcttggttttacagtccgccagatttgaGCT
GTTTTTTAGAAGGTAAAAgtttattagaatttttttaagaagaaaaatta
GTTGGGGTCACTTTGATGAAAATCTTTCCACAACCCTCTTGAATTACCCG
GAAGAATTTTCTGTCTTGCGTAAGAATTTTGCCACCTTTTCCTGACTAAT
TTTTCCCCTTTAAGTTATAAATGAATGTCGTcgacaattttgttttgaat
tttaggtGACCGGAATTTCATCTTTCAATAAAGAAGGAGCAACTGTTTCC
AAAGCAATCACAGGTATACCATGTTTGAGTATTAGTCTTGTACTTTCGTA
CTCTGTAactttccttataaaaaagccGTGTCCGTCTAGTATAGGCAAAT
TTTTACCTCACAATTTTCCTGTTTCAATTTCACTTACCCTGAGAAAGAAC
TTTGGAAAACACTTTCACCAAAATCATCGACGCCAAAATCTATAATAANA
AGAACTTTGGAAAACACTTTCACCAAAATCATCGACGCTAAAATCTATAA
TAAGCAAGATGAAAATTAACCAAAAAATGATAAATGGTGGAGGCTGATTT
TTGAAGTATGAAAATAGTTATTTCAGCTTAAAAATGATCAATCAACGGTT
aagattcatgatattcatgaagtAATGTTTATACGGAAGTCCCAAAAAAT
CGGTAGTTTGCCACtacttttgaatttaaacaataacaCCGGCGCTACTT
TGGGGGCTTccatataaaacattacgtcttcACGAGTATAATGAATTGAG
ATTTTCTTTCAGTTCCTTCATCCAGTGATTCAAGCGGAGCGAGCGGTGAA
ACGATTGCAGGCGGAGTCATTGGTGGTATTGTGTTTTTGGTCTTGCTCAT
TTTGTGCATAGCCGTTATCTATCGAAAGTGGAGAGAACGAAATGAGGTAG
GTTCTCTAGCTTGATCTTTCTACTTCTTTAAGAAACAAAGTTAAAGATAA
GTAGACTTTAGGACAATTGTTTTTTTATACTCAAAAAGTGAGTGAGCGTT
AACTGCAGCGTCATAGGCGACTATTACAAGAGTCTAAAGATAGATGGAAC
GAATTTACGCGGCAAAAGTGAGCGTATGAGTAGGAAGAAGATTTGTCAGC
GGGAAGGGGGCTGAAAGCATTCATTCTTTGTTAATCAACACCCTTTCTAC
AACGTTTGCTTGCTCTCCCACCCACcttctatttttttaaattcccaCCA
CccttatgttcccgccctctgataCAATTTGTATGTCTGCTGTGTAAGTT
GACTGACCGTCCGAACATAACATTCAGTCTaacctcaaaaaaaattctgc
aaCTTAAGTGTTTCAACCTTCTCTTTCTATCTGCAAAGGTTTTGAAAGCA
GTCTTTAGTCTTTTTAAGGGTCCATTGTCGGAGGTCTGGTATTTTGTATA
CCCAACATTCTCCAGGCTCATTACCCAAACACCCTAATGGGgctattttc
tttttccaaagattttgaaagcAGCTCTGAACACAACCAAACTAATGAAA
AGAGCTTCCCCAGATgacacacaacgtcaaaacaacgtccatgtgcattt
ataacgtccaaataacgttatttgaacgttaaaacaacgttgtgtgccag
ctgggtcagAACCACAAATGCACTTGTTAAACTTAGGAAAAAACAATTTC
AGTGACTTTTTACggaaaaaagcaattttttgcttcaaaacCCGTGTACT
GATTACAGAACTTTCTTGTTTGTCGTCAAGTTTTTGAAAGCCGTCTTTAG
ACTTTCTAAGGGATGATTGTCGAAGGTCTAGTATTTGCATTCCCAACATT
CTCCAGGTTCTAAACCGTCTGATAGATAGAGTCGGTATTTTTGCGTAGAT
AGCGTAGTAATCTAGCACTTTAAGGccgtctttcgattgttttcacgggg
tccacggctaGCCGAGCAGGCTATCCTATGAACTGAAAGAAACATTAGAA
GGAGTGGGGCTTCGAACTGCAAACCGTTCGATATCTTCTTCATCCGAAGG
TTTTGAAAGCAGCTCTGAATACAATCAAACTGATGGAAGGAGGATCAGAA
CCACAAATGCATTGTCGCCGTGAATTGGAACAAAGGATGCGGAACATTTA
TGTTCCATTGCAAGTGTTGTTGAATCAGAATGTCGTTGATTTGGAGCAAG
AAGAGCCAATCTATGAAGAAATCCCCATCTCAGGTAATAGTAACCTATCT
AGTCACTTCAAGAAATCAGTGAGTATTTTCGCTCATTAAACCCATGGTCG
ATTCGGAGCAAGAAGAGCCGGTCTATGAAGAAATTCTCATAGCAGGTAGT
GTAACCTATCTAGCCACTTTAAGAAATCAGTGGCATATTCTCCCAGGGAG
TCACCCATTTAACCGTAGTCGATTTGGGTCAAGAAAGGCGGGTTTATGAA
GAAATTCCCATCTCACAGGTAGTTGTATACCTATAATTCGATCGAATTGA
CGATACTCTTCAAGGTACTTTTCTGGAACTTCTTTTCTGAAGGAATTATA
ACGACCTACGTGAAGGAATTACTTTCGTAGTAAAAATTAAGTTAGATTCA
ATTtgggcacacaacgttgtttcaacgtttttctaacgttatatggacgt
tgtgaacgttagaaaaacgtcgaaacaacgttgcgtgccagctAGATTCA
ATTTGGAATTGATTTTTCTTATCTAGGTTACAATTATCCTTACCGTAAAC
TGAAAAAAGTTCAAGAACTCGGTCAAGGGAATTTCGCCAAAGTCTCTCAA
TGTGAAGCTGATGATATCTGTGGAAGACCTGGAAAAACTCTGGTGGCTGT
TAAACAACTTAAAGGTTTTTGTTTCAGTTATCCCTTCGTTAGTTCATCCA
TTCACTTATTCATTCATTCTTCCACTCATTCAGTAATTCTTTCATTCGTT
AATTTCTTCATTGtccattcattcattcagtAATTCATtcattaatttat
ttattttcatcattaatccattcactcactcactcactcactcactcatt
TACTCATTCACTCAATCGTTCATTTTTTTCGTTCATCATTCGCCCTACTC
ACTCTTTCTGTTTTTCATTCATTCAATCAATCATTCACTCATTCACCCGC
AGTTCTGCCACAAATTCATCTTTTCTCTCTTTCATTCATTCGCCCGTTCG
TTTTACTTATCACTCTTGACTCCATTCATTTATCCATTCATCCTTTAGAT
GACATCAAAATAACAGACGAGAAAGACTTTGAAGATGAACTTGAACTGAT
GAAAGAATTGAAAGGTTGTAAAAATGTCATCAGGCTTCTCGGCGCATGCT
CTTGTGAGTACAATTGATTTCTTATGCTCCATTCACAACCAATGCATCAG
TAGTTCAAAGGTATAGCCATAGATTTAAAGGGAAGGGTGAAAAAGTATCT
AGGTAgtaaatcctacctaggtcacgggACATTACAATAggatttcagcg
cttgaccaatcagaagcttcgcagatttttgaaaacaatagcaactaTAT
TTCTCGTGGTTTTTTTTGCAtgtgatggcttaaagcacgatatctgcttt
ataaatctgtgggtAAATCTGTACCATTTTCAGATCCACGATGTATGATC
GTCGAATACCTCCCTGGGGGAGATCTTCTCTCGTTCATGTTGAAATCACG
GCAATATCGCGCCCAGACGGAGGGTGAAGAGCTCTCACCCACAGGTGGAA
GAGAACCTCAAAAAACACTGGAGGAGATGGAGGAAGCGAGCCCCTATGCA
AC

Coding sequence (CDS) from alignment at scaffold_77:517781..522532+

>TCONS_00072386 ID=TCONS_00072386|Name=TCONS_00072386|organism=Clytia hemisphaerica|type=CDS|length=7992bp|location=Sequence derived from alignment at scaffold_77:517781..522532+ (Clytia hemisphaerica)
CGAAACTTGCTGCTGGAGATGAATGGTCGTTTCTTGGTGGTTCGTTGGCA
CAGACCTTTTTCCACTGGTGCAAAAGGAATCAGATATCGCGTGAAATGTG
GTGATATTGAGCGACTGGAAGATGGTGTTCATCTTGGAGGAGCTGTCAAA
GATATTTTAATCGTTAACATTGACCTTGGTGTTGAAGTCAAACCTGGTGA
AATTTCTTGTGAGgtGACCGGAATTTCATCTTTCAATAAAGAAGGAGCAA
CTGTTTCCAAAGCAATCACAGTTCCTTCATCCAGTGATTCAAGCGGAGCG
AGCGGTGAAACGATTGCAGGCGGAGTCATTGGTGGTATTGTGTTTTTGGT
CTTGCTCATTTTGTGCATAGCCGTTATCTATCGAAAGTGGAGAGAACGAA
ATGAGGTTTTGAAAGCAGCTCTGAATACAATCAAACTGATGGAAGGAGGA
TCAGAACCACAAATGCATTGTCGCCGTGAATTGGAACAAAGGATGCGGAA
CATTTATGTTCCATTGCAAGTGTTGTTGAATCAGAATGTCGTTGATTTGG
AGCAAGAAGAGCCAATCTATGAAGAAATCCCCATCTCAGGTTACAATTAT
CCTTACCGTAAACTGAAAAAAGTTCAAGAACTCGGTCAAGGGAATTTCGC
CAAAGTCTCTCAATGTGAAGCTGATGATATCTGTGGAAGACCTGGAAAAA
CTCTGGTGGCTGTTAAACAACTTAAAGATGACATCAAAATAACAGACGAG
AAAGACTTTGAAGATGAACTTGAACTGATGAAAGAATTGAAAGGTTGTAA
AAATGTCATCAGGCTTCTCGGCGCATGCTCTTATCCACGATGTATGATCG
TCGAATACCTCCCTGGGGGAGATCTTCTCTCGTTCATGTTGAAATCACGG
CAATATCGCGCCCAGACGGAGGGTGAAGAGCTCTCACCCACAGGTGGAAG
AGAACCTCAAAAAACACTGGAGGAGATGGAGGAAGCGAGCCCCTATGCAC
GAAACTTGCTGCTGGAGATGAATGGTCGTTTCTTGGTGGTTCGTTGGCAC
AGACCTTTTTCCACTGGTGCAAAAGGAATCAGATATCGCGTGAAATGTGG
TGATATTGAGCGACTGGAAGATGGTGTTCATCTTGGAGGAGCTGTCAAAG
ATATTTTAATCGTTAACATTGACCTTGGTGTTGAAGTCAAACCTGGTGAA
ATTTCTTGTGAGgtGACCGGAATTTCATCTTTCAATAAAGAAGGAGCAAC
TGTTTCCAAAGCAATCACAGTTCCTTCATCCAGTGATTCAAGCGGAGCGA
GCGGTGAAACGATTGCAGGCGGAGTCATTGGTGGTATTGTGTTTTTGGTC
TTGCTCATTTTGTGCATAGCCGTTATCTATCGAAAGTGGAGAGAACGAAA
TGAGGTTTTGAAAGCAGCTCTGAATACAATCAAACTGATGGAAGGAGGAT
CAGAACCACAAATGCATTGTCGCCGTGAATTGGAACAAAGGATGCGGAAC
ATTTATGTTCCATTGCAAGTGTTGTTGAATCAGAATGTCGTTGATTTGGA
GCAAGAAGAGCCAATCTATGAAGAAATCCCCATCTCAGGTTACAATTATC
CTTACCGTAAACTGAAAAAAGTTCAAGAACTCGGTCAAGGGAATTTCGCC
AAAGTCTCTCAATGTGAAGCTGATGATATCTGTGGAAGACCTGGAAAAAC
TCTGGTGGCTGTTAAACAACTTAAAGATGACATCAAAATAACAGACGAGA
AAGACTTTGAAGATGAACTTGAACTGATGAAAGAATTGAAAGGTTGTAAA
AATGTCATCAGGCTTCTCGGCGCATGCTCTTATCCACGATGTATGATCGT
CGAATACCTCCCTGGGGGAGATCTTCTCTCGTTCATGTTGAAATCACGGC
AATATCGCGCCCAGACGGAGGGTGAAGAGCTCTCACCCACAGGTGGAAGA
GAACCTCAAAAAACACTGGAGGAGATGGAGGAAGCGAGCCCCTATGCACG
AAACTTGCTGCTGGAGATGAATGGTCGTTTCTTGGTGGTTCGTTGGCACA
GACCTTTTTCCACTGGTGCAAAAGGAATCAGATATCGCGTGAAATGTGGT
GATATTGAGCGACTGGAAGATGGTGTTCATCTTGGAGGAGCTGTCAAAGA
TATTTTAATCGTTAACATTGACCTTGGTGTTGAAGTCAAACCTGGTGAAA
TTTCTTGTGAGgtGACCGGAATTTCATCTTTCAATAAAGAAGGAGCAACT
GTTTCCAAAGCAATCACAGTTCCTTCATCCAGTGATTCAAGCGGAGCGAG
CGGTGAAACGATTGCAGGCGGAGTCATTGGTGGTATTGTGTTTTTGGTCT
TGCTCATTTTGTGCATAGCCGTTATCTATCGAAAGTGGAGAGAACGAAAT
GAGGTTTTGAAAGCAGCTCTGAATACAATCAAACTGATGGAAGGAGGATC
AGAACCACAAATGCATTGTCGCCGTGAATTGGAACAAAGGATGCGGAACA
TTTATGTTCCATTGCAAGTGTTGTTGAATCAGAATGTCGTTGATTTGGAG
CAAGAAGAGCCAATCTATGAAGAAATCCCCATCTCAGGTTACAATTATCC
TTACCGTAAACTGAAAAAAGTTCAAGAACTCGGTCAAGGGAATTTCGCCA
AAGTCTCTCAATGTGAAGCTGATGATATCTGTGGAAGACCTGGAAAAACT
CTGGTGGCTGTTAAACAACTTAAAGATGACATCAAAATAACAGACGAGAA
AGACTTTGAAGATGAACTTGAACTGATGAAAGAATTGAAAGGTTGTAAAA
ATGTCATCAGGCTTCTCGGCGCATGCTCTTATCCACGATGTATGATCGTC
GAATACCTCCCTGGGGGAGATCTTCTCTCGTTCATGTTGAAATCACGGCA
ATATCGCGCCCAGACGGAGGGTGAAGAGCTCTCACCCACAGGTGGAAGAG
AACCTCAAAAAACACTGGAGGAGATGGAGGAAGCGAGCCCCTATGCACGA
AACTTGCTGCTGGAGATGAATGGTCGTTTCTTGGTGGTTCGTTGGCACAG
ACCTTTTTCCACTGGTGCAAAAGGAATCAGATATCGCGTGAAATGTGGTG
ATATTGAGCGACTGGAAGATGGTGTTCATCTTGGAGGAGCTGTCAAAGAT
ATTTTAATCGTTAACATTGACCTTGGTGTTGAAGTCAAACCTGGTGAAAT
TTCTTGTGAGgtGACCGGAATTTCATCTTTCAATAAAGAAGGAGCAACTG
TTTCCAAAGCAATCACAGTTCCTTCATCCAGTGATTCAAGCGGAGCGAGC
GGTGAAACGATTGCAGGCGGAGTCATTGGTGGTATTGTGTTTTTGGTCTT
GCTCATTTTGTGCATAGCCGTTATCTATCGAAAGTGGAGAGAACGAAATG
AGGTTTTGAAAGCAGCTCTGAATACAATCAAACTGATGGAAGGAGGATCA
GAACCACAAATGCATTGTCGCCGTGAATTGGAACAAAGGATGCGGAACAT
TTATGTTCCATTGCAAGTGTTGTTGAATCAGAATGTCGTTGATTTGGAGC
AAGAAGAGCCAATCTATGAAGAAATCCCCATCTCAGGTTACAATTATCCT
TACCGTAAACTGAAAAAAGTTCAAGAACTCGGTCAAGGGAATTTCGCCAA
AGTCTCTCAATGTGAAGCTGATGATATCTGTGGAAGACCTGGAAAAACTC
TGGTGGCTGTTAAACAACTTAAAGATGACATCAAAATAACAGACGAGAAA
GACTTTGAAGATGAACTTGAACTGATGAAAGAATTGAAAGGTTGTAAAAA
TGTCATCAGGCTTCTCGGCGCATGCTCTTATCCACGATGTATGATCGTCG
AATACCTCCCTGGGGGAGATCTTCTCTCGTTCATGTTGAAATCACGGCAA
TATCGCGCCCAGACGGAGGGTGAAGAGCTCTCACCCACAGGTGGAAGAGA
ACCTCAAAAAACACTGGAGGAGATGGAGGAAGCGAGCCCCTATGCACGAA
ACTTGCTGCTGGAGATGAATGGTCGTTTCTTGGTGGTTCGTTGGCACAGA
CCTTTTTCCACTGGTGCAAAAGGAATCAGATATCGCGTGAAATGTGGTGA
TATTGAGCGACTGGAAGATGGTGTTCATCTTGGAGGAGCTGTCAAAGATA
TTTTAATCGTTAACATTGACCTTGGTGTTGAAGTCAAACCTGGTGAAATT
TCTTGTGAGgtGACCGGAATTTCATCTTTCAATAAAGAAGGAGCAACTGT
TTCCAAAGCAATCACAGTTCCTTCATCCAGTGATTCAAGCGGAGCGAGCG
GTGAAACGATTGCAGGCGGAGTCATTGGTGGTATTGTGTTTTTGGTCTTG
CTCATTTTGTGCATAGCCGTTATCTATCGAAAGTGGAGAGAACGAAATGA
GGTTTTGAAAGCAGCTCTGAATACAATCAAACTGATGGAAGGAGGATCAG
AACCACAAATGCATTGTCGCCGTGAATTGGAACAAAGGATGCGGAACATT
TATGTTCCATTGCAAGTGTTGTTGAATCAGAATGTCGTTGATTTGGAGCA
AGAAGAGCCAATCTATGAAGAAATCCCCATCTCAGGTTACAATTATCCTT
ACCGTAAACTGAAAAAAGTTCAAGAACTCGGTCAAGGGAATTTCGCCAAA
GTCTCTCAATGTGAAGCTGATGATATCTGTGGAAGACCTGGAAAAACTCT
GGTGGCTGTTAAACAACTTAAAGATGACATCAAAATAACAGACGAGAAAG
ACTTTGAAGATGAACTTGAACTGATGAAAGAATTGAAAGGTTGTAAAAAT
GTCATCAGGCTTCTCGGCGCATGCTCTTATCCACGATGTATGATCGTCGA
ATACCTCCCTGGGGGAGATCTTCTCTCGTTCATGTTGAAATCACGGCAAT
ATCGCGCCCAGACGGAGGGTGAAGAGCTCTCACCCACAGGTGGAAGAGAA
CCTCAAAAAACACTGGAGGAGATGGAGGAAGCGAGCCCCTATGCACGAAA
CTTGCTGCTGGAGATGAATGGTCGTTTCTTGGTGGTTCGTTGGCACAGAC
CTTTTTCCACTGGTGCAAAAGGAATCAGATATCGCGTGAAATGTGGTGAT
ATTGAGCGACTGGAAGATGGTGTTCATCTTGGAGGAGCTGTCAAAGATAT
TTTAATCGTTAACATTGACCTTGGTGTTGAAGTCAAACCTGGTGAAATTT
CTTGTGAGgtGACCGGAATTTCATCTTTCAATAAAGAAGGAGCAACTGTT
TCCAAAGCAATCACAGTTCCTTCATCCAGTGATTCAAGCGGAGCGAGCGG
TGAAACGATTGCAGGCGGAGTCATTGGTGGTATTGTGTTTTTGGTCTTGC
TCATTTTGTGCATAGCCGTTATCTATCGAAAGTGGAGAGAACGAAATGAG
GTTTTGAAAGCAGCTCTGAATACAATCAAACTGATGGAAGGAGGATCAGA
ACCACAAATGCATTGTCGCCGTGAATTGGAACAAAGGATGCGGAACATTT
ATGTTCCATTGCAAGTGTTGTTGAATCAGAATGTCGTTGATTTGGAGCAA
GAAGAGCCAATCTATGAAGAAATCCCCATCTCAGGTTACAATTATCCTTA
CCGTAAACTGAAAAAAGTTCAAGAACTCGGTCAAGGGAATTTCGCCAAAG
TCTCTCAATGTGAAGCTGATGATATCTGTGGAAGACCTGGAAAAACTCTG
GTGGCTGTTAAACAACTTAAAGATGACATCAAAATAACAGACGAGAAAGA
CTTTGAAGATGAACTTGAACTGATGAAAGAATTGAAAGGTTGTAAAAATG
TCATCAGGCTTCTCGGCGCATGCTCTTATCCACGATGTATGATCGTCGAA
TACCTCCCTGGGGGAGATCTTCTCTCGTTCATGTTGAAATCACGGCAATA
TCGCGCCCAGACGGAGGGTGAAGAGCTCTCACCCACAGGTGGAAGAGAAC
CTCAAAAAACACTGGAGGAGATGGAGGAAGCGAGCCCCTATGCACGAAAC
TTGCTGCTGGAGATGAATGGTCGTTTCTTGGTGGTTCGTTGGCACAGACC
TTTTTCCACTGGTGCAAAAGGAATCAGATATCGCGTGAAATGTGGTGATA
TTGAGCGACTGGAAGATGGTGTTCATCTTGGAGGAGCTGTCAAAGATATT
TTAATCGTTAACATTGACCTTGGTGTTGAAGTCAAACCTGGTGAAATTTC
TTGTGAGgtGACCGGAATTTCATCTTTCAATAAAGAAGGAGCAACTGTTT
CCAAAGCAATCACAGTTCCTTCATCCAGTGATTCAAGCGGAGCGAGCGGT
GAAACGATTGCAGGCGGAGTCATTGGTGGTATTGTGTTTTTGGTCTTGCT
CATTTTGTGCATAGCCGTTATCTATCGAAAGTGGAGAGAACGAAATGAGG
TTTTGAAAGCAGCTCTGAATACAATCAAACTGATGGAAGGAGGATCAGAA
CCACAAATGCATTGTCGCCGTGAATTGGAACAAAGGATGCGGAACATTTA
TGTTCCATTGCAAGTGTTGTTGAATCAGAATGTCGTTGATTTGGAGCAAG
AAGAGCCAATCTATGAAGAAATCCCCATCTCAGGTTACAATTATCCTTAC
CGTAAACTGAAAAAAGTTCAAGAACTCGGTCAAGGGAATTTCGCCAAAGT
CTCTCAATGTGAAGCTGATGATATCTGTGGAAGACCTGGAAAAACTCTGG
TGGCTGTTAAACAACTTAAAGATGACATCAAAATAACAGACGAGAAAGAC
TTTGAAGATGAACTTGAACTGATGAAAGAATTGAAAGGTTGTAAAAATGT
CATCAGGCTTCTCGGCGCATGCTCTTATCCACGATGTATGATCGTCGAAT
ACCTCCCTGGGGGAGATCTTCTCTCGTTCATGTTGAAATCACGGCAATAT
CGCGCCCAGACGGAGGGTGAAGAGCTCTCACCCACAGGTGGAAGAGAACC
TCAAAAAACACTGGAGGAGATGGAGGAAGCGAGCCCCTATGCACGAAACT
TGCTGCTGGAGATGAATGGTCGTTTCTTGGTGGTTCGTTGGCACAGACCT
TTTTCCACTGGTGCAAAAGGAATCAGATATCGCGTGAAATGTGGTGATAT
TGAGCGACTGGAAGATGGTGTTCATCTTGGAGGAGCTGTCAAAGATATTT
TAATCGTTAACATTGACCTTGGTGTTGAAGTCAAACCTGGTGAAATTTCT
TGTGAGgtGACCGGAATTTCATCTTTCAATAAAGAAGGAGCAACTGTTTC
CAAAGCAATCACAGTTCCTTCATCCAGTGATTCAAGCGGAGCGAGCGGTG
AAACGATTGCAGGCGGAGTCATTGGTGGTATTGTGTTTTTGGTCTTGCTC
ATTTTGTGCATAGCCGTTATCTATCGAAAGTGGAGAGAACGAAATGAGGT
TTTGAAAGCAGCTCTGAATACAATCAAACTGATGGAAGGAGGATCAGAAC
CACAAATGCATTGTCGCCGTGAATTGGAACAAAGGATGCGGAACATTTAT
GTTCCATTGCAAGTGTTGTTGAATCAGAATGTCGTTGATTTGGAGCAAGA
AGAGCCAATCTATGAAGAAATCCCCATCTCAGGTTACAATTATCCTTACC
GTAAACTGAAAAAAGTTCAAGAACTCGGTCAAGGGAATTTCGCCAAAGTC
TCTCAATGTGAAGCTGATGATATCTGTGGAAGACCTGGAAAAACTCTGGT
GGCTGTTAAACAACTTAAAGATGACATCAAAATAACAGACGAGAAAGACT
TTGAAGATGAACTTGAACTGATGAAAGAATTGAAAGGTTGTAAAAATGTC
ATCAGGCTTCTCGGCGCATGCTCTTATCCACGATGTATGATCGTCGAATA
CCTCCCTGGGGGAGATCTTCTCTCGTTCATGTTGAAATCACGGCAATATC
GCGCCCAGACGGAGGGTGAAGAGCTCTCACCCACAGGTGGAAGAGAACCT
CAAAAAACACTGGAGGAGATGGAGGAAGCGAGCCCCTATGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044947XLOC_044947Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072386-exon-scaffold_77-1491911889:517781..517856TCONS_00072386-exon-scaffold_77-1491911889:517781..517856Clytia hemisphaericaexon
TCONS_00072386-exon-scaffold_77-1510915933:517781..517856TCONS_00072386-exon-scaffold_77-1510915933:517781..517856Clytia hemisphaericaexon
TCONS_00072386-exon-scaffold_77-1575043694:517781..517856TCONS_00072386-exon-scaffold_77-1575043694:517781..517856Clytia hemisphaericaexon
TCONS_00072386-exon-scaffold_77-1491911889:518500..518636TCONS_00072386-exon-scaffold_77-1491911889:518500..518636Clytia hemisphaericaexon
TCONS_00072386-exon-scaffold_77-1510915933:518500..518636TCONS_00072386-exon-scaffold_77-1510915933:518500..518636Clytia hemisphaericaexon
TCONS_00072386-exon-scaffold_77-1575043694:518500..518636TCONS_00072386-exon-scaffold_77-1575043694:518500..518636Clytia hemisphaericaexon
TCONS_00072386-exon-scaffold_77-1491911889:518986..519043TCONS_00072386-exon-scaffold_77-1491911889:518986..519043Clytia hemisphaericaexon
TCONS_00072386-exon-scaffold_77-1510915933:518986..519043TCONS_00072386-exon-scaffold_77-1510915933:518986..519043Clytia hemisphaericaexon
TCONS_00072386-exon-scaffold_77-1575043694:518986..519043TCONS_00072386-exon-scaffold_77-1575043694:518986..519043Clytia hemisphaericaexon
TCONS_00072386-exon-scaffold_77-1491911889:519543..519676TCONS_00072386-exon-scaffold_77-1491911889:519543..519676Clytia hemisphaericaexon
TCONS_00072386-exon-scaffold_77-1510915933:519543..519676TCONS_00072386-exon-scaffold_77-1510915933:519543..519676Clytia hemisphaericaexon
TCONS_00072386-exon-scaffold_77-1575043694:519543..519676TCONS_00072386-exon-scaffold_77-1575043694:519543..519676Clytia hemisphaericaexon
TCONS_00072386-exon-scaffold_77-1491911889:520780..520963TCONS_00072386-exon-scaffold_77-1491911889:520780..520963Clytia hemisphaericaexon
TCONS_00072386-exon-scaffold_77-1510915933:520780..520963TCONS_00072386-exon-scaffold_77-1510915933:520780..520963Clytia hemisphaericaexon
TCONS_00072386-exon-scaffold_77-1575043694:520780..520963TCONS_00072386-exon-scaffold_77-1575043694:520780..520963Clytia hemisphaericaexon
TCONS_00072386-exon-scaffold_77-1491911889:521457..521594TCONS_00072386-exon-scaffold_77-1491911889:521457..521594Clytia hemisphaericaexon
TCONS_00072386-exon-scaffold_77-1510915933:521457..521594TCONS_00072386-exon-scaffold_77-1510915933:521457..521594Clytia hemisphaericaexon
TCONS_00072386-exon-scaffold_77-1575043694:521457..521594TCONS_00072386-exon-scaffold_77-1575043694:521457..521594Clytia hemisphaericaexon
TCONS_00072386-exon-scaffold_77-1491911889:521979..522083TCONS_00072386-exon-scaffold_77-1491911889:521979..522083Clytia hemisphaericaexon
TCONS_00072386-exon-scaffold_77-1510915933:521979..522083TCONS_00072386-exon-scaffold_77-1510915933:521979..522083Clytia hemisphaericaexon
TCONS_00072386-exon-scaffold_77-1575043694:521979..522083TCONS_00072386-exon-scaffold_77-1575043694:521979..522083Clytia hemisphaericaexon
TCONS_00072386-exon-scaffold_77-1491911889:522364..522532TCONS_00072386-exon-scaffold_77-1491911889:522364..522532Clytia hemisphaericaexon
TCONS_00072386-exon-scaffold_77-1510915933:522364..522532TCONS_00072386-exon-scaffold_77-1510915933:522364..522532Clytia hemisphaericaexon
TCONS_00072386-exon-scaffold_77-1575043694:522364..522532TCONS_00072386-exon-scaffold_77-1575043694:522364..522532Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072386-proteinTCONS_00072386-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_77supercontigscaffold_77:517781..522532 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0.0477358	0.0575912	0.107832	0.075496	0.327299	0.0907669	0.119333	21.0926	24.5347	8.11413	7.72502	0.907943	0.827211	0	0.249145	0.0866209	0.063376	0	0	0	0.0858465	0	0	0	0.0506559
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR020635Tyr_kinase_cat_dom
IPR001245Ser-Thr/Tyr_kinase_cat_dom
IPR017441Protein_kinase_ATP_BS
IPR000719Prot_kinase_dom
IPR011009Kinase-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004713protein tyrosine kinase activity
GO:0004672protein kinase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
molecular_function GO:0005524 ATP binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0004713 protein tyrosine kinase activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072386 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top