XLOC_044947 (gene) - C. hemisphaerica

Overview
NameXLOC_044947
Unique NameXLOC_044947
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_77:517781..522532+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044947 ID=XLOC_044947|Name=XLOC_044947|organism=Clytia hemisphaerica|type=gene|length=4752bp|location=Sequence derived from alignment at scaffold_77:517781..522532+ (Clytia hemisphaerica)
CGAAACTTGCTGCTGGAGATGAATGGTCGTTTCTTGGTGGTTCGTTGGCA CAGACCTTTTTCCACTGGTGCAAAAGGTTTGATGTCATTcattttcaaaa cgtttttaaaaGAAGAGCAAttggctctaattagcatatttcaatggtgc tgaagcaatttggagggtttagaaccggctgggaacaatagttttaacag aaaaccggtttctaggcctccagagccgcctgggcttacgctgtaagctt acagcgctgtacttaaggccttaaaacaatatgtaagcttagggaaattc ctCCATTCCTAAATGTCTTAAGGAAAATTTTACGTACTGTGAAAAAAGCT TCATGTAGAATTTTTAGTTCATTGTATAAGTTGATGATATTTAAGATAAG TCTAACAATTTTAGTACACCCCTATGTCTCAAACCTGCTGGGACCCGCTT TACTAGacaatttggctgaaattttgttcCCGCTCGGAAAAATACGAATA ATATtttcagcctctccacttttTTGAACtgagaatttctatccccattg acccattgagattttcatagaaattttcattccaACTGTCGGAAGAAGTT CCACCGAAGGGCTGTTGTGGTAGATGGTGACCTTTAGGTTTTCAGTAGCT ATCTATCCGAaaatgataaacattttttaaagattgttgTTTCATCTAAC CCCGGGCGTTTTCTTTTAGGAATCAGATATCGCGTGAAATGTGGTGATAT TGAGCGACTGGAAGATGGTGTTCATCTTGGAGGAGCTGTCAAAGATATTT TAATCGTTAACATTGACCTTGGTGTTGAAGTCAAACCTGGTGAAATTTCT TGTGAGGTAAGACGATGCAAAATAAATTACATCGAGAATAGCCCACAGTc cacttaaagtttttttatagactggatggcgcgaataagtggcccggtag tatacgataatatgcttttgcttggttttacagtccgccagatttgaGCT GTTTTTTAGAAGGTAAAAgtttattagaatttttttaagaagaaaaatta GTTGGGGTCACTTTGATGAAAATCTTTCCACAACCCTCTTGAATTACCCG GAAGAATTTTCTGTCTTGCGTAAGAATTTTGCCACCTTTTCCTGACTAAT TTTTCCCCTTTAAGTTATAAATGAATGTCGTcgacaattttgttttgaat tttaggtGACCGGAATTTCATCTTTCAATAAAGAAGGAGCAACTGTTTCC AAAGCAATCACAGGTATACCATGTTTGAGTATTAGTCTTGTACTTTCGTA CTCTGTAactttccttataaaaaagccGTGTCCGTCTAGTATAGGCAAAT TTTTACCTCACAATTTTCCTGTTTCAATTTCACTTACCCTGAGAAAGAAC TTTGGAAAACACTTTCACCAAAATCATCGACGCCAAAATCTATAATAANA AGAACTTTGGAAAACACTTTCACCAAAATCATCGACGCTAAAATCTATAA TAAGCAAGATGAAAATTAACCAAAAAATGATAAATGGTGGAGGCTGATTT TTGAAGTATGAAAATAGTTATTTCAGCTTAAAAATGATCAATCAACGGTT aagattcatgatattcatgaagtAATGTTTATACGGAAGTCCCAAAAAAT CGGTAGTTTGCCACtacttttgaatttaaacaataacaCCGGCGCTACTT TGGGGGCTTccatataaaacattacgtcttcACGAGTATAATGAATTGAG ATTTTCTTTCAGTTCCTTCATCCAGTGATTCAAGCGGAGCGAGCGGTGAA ACGATTGCAGGCGGAGTCATTGGTGGTATTGTGTTTTTGGTCTTGCTCAT TTTGTGCATAGCCGTTATCTATCGAAAGTGGAGAGAACGAAATGAGGTAG GTTCTCTAGCTTGATCTTTCTACTTCTTTAAGAAACAAAGTTAAAGATAA GTAGACTTTAGGACAATTGTTTTTTTATACTCAAAAAGTGAGTGAGCGTT AACTGCAGCGTCATAGGCGACTATTACAAGAGTCTAAAGATAGATGGAAC GAATTTACGCGGCAAAAGTGAGCGTATGAGTAGGAAGAAGATTTGTCAGC GGGAAGGGGGCTGAAAGCATTCATTCTTTGTTAATCAACACCCTTTCTAC AACGTTTGCTTGCTCTCCCACCCACcttctatttttttaaattcccaCCA CccttatgttcccgccctctgataCAATTTGTATGTCTGCTGTGTAAGTT GACTGACCGTCCGAACATAACATTCAGTCTaacctcaaaaaaaattctgc aaCTTAAGTGTTTCAACCTTCTCTTTCTATCTGCAAAGGTTTTGAAAGCA GTCTTTAGTCTTTTTAAGGGTCCATTGTCGGAGGTCTGGTATTTTGTATA CCCAACATTCTCCAGGCTCATTACCCAAACACCCTAATGGGgctattttc tttttccaaagattttgaaagcAGCTCTGAACACAACCAAACTAATGAAA AGAGCTTCCCCAGATgacacacaacgtcaaaacaacgtccatgtgcattt ataacgtccaaataacgttatttgaacgttaaaacaacgttgtgtgccag ctgggtcagAACCACAAATGCACTTGTTAAACTTAGGAAAAAACAATTTC AGTGACTTTTTACggaaaaaagcaattttttgcttcaaaacCCGTGTACT GATTACAGAACTTTCTTGTTTGTCGTCAAGTTTTTGAAAGCCGTCTTTAG ACTTTCTAAGGGATGATTGTCGAAGGTCTAGTATTTGCATTCCCAACATT CTCCAGGTTCTAAACCGTCTGATAGATAGAGTCGGTATTTTTGCGTAGAT AGCGTAGTAATCTAGCACTTTAAGGccgtctttcgattgttttcacgggg tccacggctaGCCGAGCAGGCTATCCTATGAACTGAAAGAAACATTAGAA GGAGTGGGGCTTCGAACTGCAAACCGTTCGATATCTTCTTCATCCGAAGG TTTTGAAAGCAGCTCTGAATACAATCAAACTGATGGAAGGAGGATCAGAA CCACAAATGCATTGTCGCCGTGAATTGGAACAAAGGATGCGGAACATTTA TGTTCCATTGCAAGTGTTGTTGAATCAGAATGTCGTTGATTTGGAGCAAG AAGAGCCAATCTATGAAGAAATCCCCATCTCAGGTAATAGTAACCTATCT AGTCACTTCAAGAAATCAGTGAGTATTTTCGCTCATTAAACCCATGGTCG ATTCGGAGCAAGAAGAGCCGGTCTATGAAGAAATTCTCATAGCAGGTAGT GTAACCTATCTAGCCACTTTAAGAAATCAGTGGCATATTCTCCCAGGGAG TCACCCATTTAACCGTAGTCGATTTGGGTCAAGAAAGGCGGGTTTATGAA GAAATTCCCATCTCACAGGTAGTTGTATACCTATAATTCGATCGAATTGA CGATACTCTTCAAGGTACTTTTCTGGAACTTCTTTTCTGAAGGAATTATA ACGACCTACGTGAAGGAATTACTTTCGTAGTAAAAATTAAGTTAGATTCA ATTtgggcacacaacgttgtttcaacgtttttctaacgttatatggacgt tgtgaacgttagaaaaacgtcgaaacaacgttgcgtgccagctAGATTCA ATTTGGAATTGATTTTTCTTATCTAGGTTACAATTATCCTTACCGTAAAC TGAAAAAAGTTCAAGAACTCGGTCAAGGGAATTTCGCCAAAGTCTCTCAA TGTGAAGCTGATGATATCTGTGGAAGACCTGGAAAAACTCTGGTGGCTGT TAAACAACTTAAAGGTTTTTGTTTCAGTTATCCCTTCGTTAGTTCATCCA TTCACTTATTCATTCATTCTTCCACTCATTCAGTAATTCTTTCATTCGTT AATTTCTTCATTGtccattcattcattcagtAATTCATtcattaatttat ttattttcatcattaatccattcactcactcactcactcactcactcatt TACTCATTCACTCAATCGTTCATTTTTTTCGTTCATCATTCGCCCTACTC ACTCTTTCTGTTTTTCATTCATTCAATCAATCATTCACTCATTCACCCGC AGTTCTGCCACAAATTCATCTTTTCTCTCTTTCATTCATTCGCCCGTTCG TTTTACTTATCACTCTTGACTCCATTCATTTATCCATTCATCCTTTAGAT GACATCAAAATAACAGACGAGAAAGACTTTGAAGATGAACTTGAACTGAT GAAAGAATTGAAAGGTTGTAAAAATGTCATCAGGCTTCTCGGCGCATGCT CTTGTGAGTACAATTGATTTCTTATGCTCCATTCACAACCAATGCATCAG TAGTTCAAAGGTATAGCCATAGATTTAAAGGGAAGGGTGAAAAAGTATCT AGGTAgtaaatcctacctaggtcacgggACATTACAATAggatttcagcg cttgaccaatcagaagcttcgcagatttttgaaaacaatagcaactaTAT TTCTCGTGGTTTTTTTTGCAtgtgatggcttaaagcacgatatctgcttt ataaatctgtgggtAAATCTGTACCATTTTCAGATCCACGATGTATGATC GTCGAATACCTCCCTGGGGGAGATCTTCTCTCGTTCATGTTGAAATCACG GCAATATCGCGCCCAGACGGAGGGTGAAGAGCTCTCACCCACAGGTGGAA GAGAACCTCAAAAAACACTGGAGGAGATGGAGGAAGCGAGCCCCTATGCA AC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072386TCONS_00072386Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072386-proteinTCONS_00072386-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_77supercontigscaffold_77:517781..522532 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0.05 0.06 0.11 0.08 0.33 0.09 0.12 21.09 24.53 8.11 7.73 0.91 0.83 0 0.25 0.09 0.06 0 0 0 0.09 0 0 0 0.05