|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072384 ID=TCONS_00072384|Name=TCONS_00072384|organism=Clytia hemisphaerica|type=transcript|length=484bp
ATCGTTTTGAACCTACTGACAGCAATTGTATCTTTGATATTCACTCGACA
GCAAGAATCATAAACAACTTTTTCATTTATATACTTCAGACAATTTTcga
ccaaaaatttttgaatttcattccTTTACATATCGTATGATTGGTTCTAA
AATCGAGTGGTAATACATTTTGAAcgttttttctgacttttctgAAATCA
AATCGCAAAGCTTGAGCAACCAGCTTTTTTAATTCGTGATTTTGCAACAC
GGAATATAAAAAAGACCAAGGCGTAAGAATGTTGGATGGTAAACTAAATT
TAACCATGCTGTTCTTCTGAAAATCtttgtatattttatattttctataa
ATTATTTTCTATAAATTCATTTTTGTTAATTATTGAATTAATATAATATT
GCCCTCAGTCCTCGCAAgttcggtcgttacttgacctcgggcaatatttc
tcggTGCAGCcatcactaaccggtcattattgta Run BLAST on NCBI transcript from alignment at scaffold_77:505879..506774+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072384 ID=TCONS_00072384|Name=TCONS_00072384|organism=Clytia hemisphaerica|type=transcript|length=896bp|location=Sequence derived from alignment at scaffold_77:505879..506774+ (Clytia hemisphaerica)
ATCGTTTTGAACCTACTGACAGCAATTGTATCTTTGATATTCACTCGACA
GCAAGAATCATAAACAACTTTTTCATTTATATGCTTCAGACAAtctttta
ccaaaaatatttggatttcgTTTCTCTATACTTAGTATGGTTGGACATTT
ATCATTGCTTGGTTGGCTATCGTTTTGAACCTTCTAACTGCAATCGTATC
TTTAATATTCACTCGAAAGCAAAAATAATAAACGACTTTTTCATTTATAT
ACTTCAGACAATCTATTACCAAAGATTTTTGGATTCCATCGTTTTAAATC
TACTTACATTTTATAACATTTTATATGCTTCAGACAATTTATTACAGGAA
ATATCTGGATTTCGTTTTTCTATACATCTTATGGCTGGACATTTATTATT
GCTTGGCTAGCTATCGTTTTGAACCTACTGACTGCAATTGTATCTTTGAT
ATTTACTCGACAGCAAGAATCGTAAACGACTTTTACATTTATATACTTCA
GACAATTTTcgaccaaaaatttttgaatttcattccTTTACATATCGTAT
GATTGGTTCTAAAATCGAGTGGTAATACATTTTGAAcgttttttctgact
tttctgAAATCAAATCGCAAAGCTTGAGCAACCAGCTTTTTTAATTCGTG
ATTTTGCAACACGGAATATAAAAAAGACCAAGGCGTAAGAATGTTGGATG
GTAAACTAAATTTAACCATGCTGTTCTTCTGAAAATCtttgtatatttta
tattttctataaATTATTTTCTATAAATTCATTTTTGTTAATTATTGAAT
TAATATAATATTGCCCTCAGTCCTCGCAAgttcggtcgttacttgacctc
gggcaatatttctcggTGCAGCcatcactaaccggtcattattgta
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072384-exon-scaffold_77-1491911889:505879..505952 | TCONS_00072384-exon-scaffold_77-1491911889:505879..505952 | Clytia hemisphaerica | exon |
| TCONS_00072384-exon-scaffold_77-1510915933:505879..505952 | TCONS_00072384-exon-scaffold_77-1510915933:505879..505952 | Clytia hemisphaerica | exon |
| TCONS_00072384-exon-scaffold_77-1575043694:505879..505952 | TCONS_00072384-exon-scaffold_77-1575043694:505879..505952 | Clytia hemisphaerica | exon |
| TCONS_00072384-exon-scaffold_77-1491911889:506365..506774 | TCONS_00072384-exon-scaffold_77-1491911889:506365..506774 | Clytia hemisphaerica | exon |
| TCONS_00072384-exon-scaffold_77-1510915933:506365..506774 | TCONS_00072384-exon-scaffold_77-1510915933:506365..506774 | Clytia hemisphaerica | exon |
| TCONS_00072384-exon-scaffold_77-1575043694:506365..506774 | TCONS_00072384-exon-scaffold_77-1575043694:506365..506774 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_77 | supercontig | scaffold_77:505879..506774 + |
Blast
The following BLAST results are available for this feature:
|
