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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072379 ID=TCONS_00072379|Name=TCONS_00072379|organism=Clytia hemisphaerica|type=transcript|length=620bp
CCCCTCCCGGGGGCTGTTACCATTACAATCAAATAGGTGAGATTTATTTT
CTGAGAAGCATTTCAGTAATTTCATCGTTGGATATGTACAATATGTACAG
TGTTTGTTTTATCTTGATTGATGGGCTCAGATGGTTTGTGATTGGCTGAT
TCTTGCATAGATGGTTTTTGATTGGCTGATTCTTGCATAGATGGTTTGTG
ATTGGCTGATTCTTGCACAGGTGGTTTTTGATTGGCTGATTCTTGCTCAG
ATGGTTTGTGATTGGCTGATTCTTGCATAGATGGTTTTTGATTGGCTGAT
TCTTGCATAGATGGTTTGTGATTGGCTGATTCTTGCACAGATGCTTTTTG
ATTGGCTGAATCTTTTTCGTTAATTTTATCGTTCGATTCCTTTTTAGGCT
TTTCTGGTCCTTGGTTGTCTTTATCGggatttttctttttccccGATTCG
TCAGAATTTTTTCCCGATTCtgtatctttttcttttaaattggtTTCATG
TTTtagttcttcattttcttttttttcgttctttttctCGGGTTCGTTTT
CTTTGTAATGGGGAATCTTCTCATGAGAATTGTTCCCTGGAGAATCCTTC
TTGTTTGTGGAATTCTCTTT Run BLAST on NCBI transcript from alignment at scaffold_77:445747..446636+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072379 ID=TCONS_00072379|Name=TCONS_00072379|organism=Clytia hemisphaerica|type=transcript|length=890bp|location=Sequence derived from alignment at scaffold_77:445747..446636+ (Clytia hemisphaerica)
CCCCTCCCGGGGGCTGTTACCATTACAATCAAATAGGTGAGATTTATTTT
CTGAGAAGCATTTCAGTAATTTCATCGTTGGATATGTACAATATGTACAG
TGTTTGTTTTATCTTGATTGATGGGCTCAGATGGTTTGTGATTGGCTGAT
TCTTGCATAGATGGTTTTTGATTGGCTGATTCTTGCATAGATGGTTTGTG
ATTGGCTGATTCTTGCACAGGTGGTTTTTGATTGGCTGATTCTTGCTCAG
ATGGTTTGTGATTGGCTGATTCTTGCATAGATGGTTTTTGATTGGCTGAT
TCTTGCATAGATGGTTTGTGATTGGCTGATTCTTGCACAGGTGGTTTTTG
ATTGGCTGATTCTTGCTCAGATGGTTTGTGATTGGCTGATTCTCGCTCAG
ATGGTTTTTGATTGGCTGATTCTTGCACAGATGGTTTGTGATTGGCTGAT
TCCACCTCAGATTGTTTGTGATTGGCTGATTCTTGCACAGGTGGTTTTTG
ATTGGCTGATTCTTGCACAGATGGTTTGTGATTGGCTGATTCCACCTCAG
ATTGTTTGTGATTGGCTGATTCTTGCACAGATGGTTTTTGATCGATCGAT
TCCGCCTCAGATGCTTTTTGATTGGCTGAATCTTTTTCGTTAATTTTATC
GTTCGATTCCTTTTTAGGCTTTTCTGGTCCTTGGTTGTCTTTATCGggat
ttttctttttccccGATTCGTCAGAATTTTTTCCCGATTCtgtatctttt
tcttttaaattggtTTCATGTTTtagttcttcattttcttttttttcgtt
ctttttctCGGGTTCGTTTTCTTTGTAATGGGGAATCTTCTCATGAGAAT
TGTTCCCTGGAGAATCCTTCTTGTTTGTGGAATTCTCTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072379-exon-scaffold_77-1491911889:445747..446086 | TCONS_00072379-exon-scaffold_77-1491911889:445747..446086 | Clytia hemisphaerica | exon |
| TCONS_00072379-exon-scaffold_77-1510915933:445747..446086 | TCONS_00072379-exon-scaffold_77-1510915933:445747..446086 | Clytia hemisphaerica | exon |
| TCONS_00072379-exon-scaffold_77-1575043694:445747..446086 | TCONS_00072379-exon-scaffold_77-1575043694:445747..446086 | Clytia hemisphaerica | exon |
| TCONS_00072379-exon-scaffold_77-1491911889:446357..446636 | TCONS_00072379-exon-scaffold_77-1491911889:446357..446636 | Clytia hemisphaerica | exon |
| TCONS_00072379-exon-scaffold_77-1510915933:446357..446636 | TCONS_00072379-exon-scaffold_77-1510915933:446357..446636 | Clytia hemisphaerica | exon |
| TCONS_00072379-exon-scaffold_77-1575043694:446357..446636 | TCONS_00072379-exon-scaffold_77-1575043694:446357..446636 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_77 | supercontig | scaffold_77:445747..446636 + |
Blast
The following BLAST results are available for this feature:
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