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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072350 ID=TCONS_00072350|Name=TCONS_00072350|organism=Clytia hemisphaerica|type=transcript|length=248bp
CCTGAAAACGGACAGCTCTCACGATCTGCTGATCTCACCACCAACAAAGT
CACTGGCAGAAGTTTCCAGTTGATCCCATCGGACGAATCACAAAATGGAA
TTATGAGGGTAGAAATGTATGGATGTATTGCTGAAAACCCACAAGGAGAT
CAAGAGAATGCTAAGATCCGTTCTTTACTTATCAACAGAGACTCTGGTGC
TATTTACCTTTGTCAACGCAACGATAAAAGAACAAGTTGCTTCACTTC Run BLAST on NCBI transcript from alignment at scaffold_77:37813..39275+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072350 ID=TCONS_00072350|Name=TCONS_00072350|organism=Clytia hemisphaerica|type=transcript|length=1463bp|location=Sequence derived from alignment at scaffold_77:37813..39275+ (Clytia hemisphaerica)
CCTGAAAACGGACAGCTCTCACGATCTGCTGATCTCACCACCAACAAAGT
CACTGGCAGAAGTTTCCAGTTGATCCCATCGGACGAATCACAAAATGGAA
TTATGAGGGTAGAAATGTATGGATGTATTGCTGAAAACCCACAAGGTGAG
TTTGAGTATCACTCAAATCAAAATCATTGATTAGCTCTACAACGAGAACT
CTTCTAATGTTTGTTCAACAAAACAATATAACCAGGCAGTATGCTAATCG
AAGCATTCGATTCCGACCTAATCGAATTCAATCGAATGGTATcgaacaaa
aaatctttattaattCGTTGGTTAATTTAACGCTTATtgtttgattgtgt
ttgatAGAATTTGATGTTCCGATTATTAAAATAGATTCGATATGGTCCGC
TTGACATTGCCtggtaaagaaaatttttctctcGGGATCTTACTTTTAAA
TGGAAAGCTGTTTTTGTAATCGAACGCAATCTTGACGCATTGTATTTACA
CATTCAGTTTTAACTAAAGCTGGTTATTATTTTCCCTATAGGAGATCAAG
AGAATGCTAAGATCCGTTCTTTACTTATCAACAGAGACTCTGGTGCTATT
TACCTTTGTCAACGCAACGATAAAAGGTCAGTATGTTGTTAATCTCaaaa
cagatcatccattccaCGCACAACACTCTCTGCGCTAAGGGATATGGCAA
ATCTGGTCTGGTTTTTCCACCAAACAATTAAAACCAAACATTCCAAACCG
CGTTGCGTTTTGTTCGAAAAGAAAGCGAAAGCGTCTGGGTTAATGTTTAC
ATAGCGGCGCTTGATTTTGGTGCGATAATTCAGCTAATCACTTGGCTTAA
AACCTCATTAACATTCATCCCAAATCTAGATGGAAAAGTTCAAAGTGGTA
CACAAAACTGGGAAGACTCTCCGGGCCCTTTAGAGTGAATATGTACCAGC
GCGATGCACGCGCGTTTCCCAGCTGgtgcacaacgttgtttcaacgttat
tCGGACGTCGTGAATAgataaatgttaaaacaacgttgcgtagtctgtag
cctgggaatccatgctatgatttcttctttgataaactgatggcgaaatg
tatagcatggtacgggctgagagtttgaatttctcagatcctaataacgg
ttgaaaacatagccaatcaaattttgttattcttttactggtcgaacttt
cttagagaaagcgcaactttcgaaatttggtttttattttagtaagtgag
gacagcgctaaattagaatttcccactgtaaaaaatgtgagtcccatatt
ggactcacagctcgaacccgtcttgtgtacatcaaattataaaaaaacac
acgacgggtctcctgtctacgtAGTCTGTAGCTTTGAATCTTGACCTTTC
TCATTATTTCACAGGGGCTTATACCTTGATCAACTTCTTTTTCAGAACAA
GTTGCTTCACTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072350-exon-scaffold_77-1491911889:37813..37957 | TCONS_00072350-exon-scaffold_77-1491911889:37813..37957 | Clytia hemisphaerica | exon |
| TCONS_00072350-exon-scaffold_77-1510915933:37813..37957 | TCONS_00072350-exon-scaffold_77-1510915933:37813..37957 | Clytia hemisphaerica | exon |
| TCONS_00072350-exon-scaffold_77-1575043694:37813..37957 | TCONS_00072350-exon-scaffold_77-1575043694:37813..37957 | Clytia hemisphaerica | exon |
| TCONS_00072350-exon-scaffold_77-1491911889:38354..38438 | TCONS_00072350-exon-scaffold_77-1491911889:38354..38438 | Clytia hemisphaerica | exon |
| TCONS_00072350-exon-scaffold_77-1510915933:38354..38438 | TCONS_00072350-exon-scaffold_77-1510915933:38354..38438 | Clytia hemisphaerica | exon |
| TCONS_00072350-exon-scaffold_77-1575043694:38354..38438 | TCONS_00072350-exon-scaffold_77-1575043694:38354..38438 | Clytia hemisphaerica | exon |
| TCONS_00072350-exon-scaffold_77-1491911889:39258..39275 | TCONS_00072350-exon-scaffold_77-1491911889:39258..39275 | Clytia hemisphaerica | exon |
| TCONS_00072350-exon-scaffold_77-1510915933:39258..39275 | TCONS_00072350-exon-scaffold_77-1510915933:39258..39275 | Clytia hemisphaerica | exon |
| TCONS_00072350-exon-scaffold_77-1575043694:39258..39275 | TCONS_00072350-exon-scaffold_77-1575043694:39258..39275 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_77 | supercontig | scaffold_77:37813..39275 + |
Blast
The following BLAST results are available for this feature:
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