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Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072263 ID=TCONS_00072263|Name=TCONS_00072263|organism=Clytia hemisphaerica|type=transcript|length=1115bpRun BLAST on NCBI transcript from alignment at scaffold_72:32975..127822+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00072263 ID=TCONS_00072263|Name=TCONS_00072263|organism=Clytia hemisphaerica|type=transcript|length=94848bp|location=Sequence derived from alignment at scaffold_72:32975..127822+ (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2
Blast
BLAST of TCONS_00072263 vs. Swiss-Prot (Human)
Match: MACD1 (O-acetyl-ADP-ribose deacetylase MACROD1 OS=Homo sapiens GN=MACROD1 PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.305e-16 Identity = 39/79 (49.37%), Postives = 47/79 (59.49%), Query Frame = 1
Query: 481 KFSADRIINNKISLWNGDITYLEVDAIVNPTGEGLVCYGGVDGAIRRVAGPTLFKELSQFSGCAPGEAVFTGGHMLPAR 717
++ D+ +N KISL DIT LEVDAIVN L+ GGVDG I R AGP L E C G+A TGG+ LPA+
Sbjct: 143 RYKKDKQLNEKISLLRSDITKLEVDAIVNAANSSLLGGGGVDGCIHRAAGPLLTDECRTLQSCKTGKAKITGGYRLPAK 221 The following BLAST results are available for this feature:
BLAST of TCONS_00072263 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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