TCONS_00072166 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00072166
Unique Name	TCONS_00072166
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2846

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_71:408825..413940-
coding sequence from alignment at scaffold_71:408825..413940-

transcript sequence

>TCONS_00072166 ID=TCONS_00072166|Name=TCONS_00072166|organism=Clytia hemisphaerica|type=transcript|length=2846bp
GGGTAACATTCACAAACAAATTCATTCACACTCACTTCAAACCAGAACAA
CTAAGGAAAGTGCAAAACTTCAATAACATTGGAAAATTCCAACTTAACAT
TCTGTCTAGTGAtggatttttacaagtttttgacATTCCTTATTTGCTTG
AGTTCGGTTACGTTATGCTTTGGAGCCGaaaatgaagcaatttttaACGG
AGTCCGATATTACTTCAGTCCAACGCCTTTGTCTTGGCAAAACGCAGAAA
TTGATTGCATTAACCGCGGAGGTCATCTTACAAGTGTGCActcaaaagct
gaaaatgattTCTTGACAGACCAAAGTATATCAAGATTTGGAGGTGTAAG
CCTTTGGTATGGTGGGATTAGAATTAACAATGTCTTTACTTGGTCCGATA
GAACACCTTTTACGACAACATTCTGGGCTTTAGGAGAACCTAATGGTCCA
CATGTTGAAAACTGTTTACATATGACAGCTGACCATATTGGTCAGTGGAA
TGATCTTCGTTGTATTCCAGAGCTTAGATATGTTTGTAAATTAGGTGAAG
GAATTCCAATTGATGTCGAATGTTCAGCCAGTAGTCTAAAAGCAATATTC
AATATTACTGACCTTGATGCACAACTTCTGCCATATTCAATCAAATTCCT
TGGAAACGACACGTGTGAATCAATCACTGCCGCATCCACTAATCACATTA
AAGATGGAAAAACTTGGATTGCAACTAACTATACAGATTGTGGAACAAAA
GCGTATCACCAGGGAAACCAAATCGCTTTCGAACAAACAATTCTCATAGA
ATATGGATCTCGATCACAACAATCACTTGTCTACAGATATTTTAACTCTT
CGTACACAGTTAAATGTGTTTTGGACCGTAGTATCACAACCAATCTAACA
ATTGATGTTATAGATCGCCAAACAGATCAACAAGTTAATGGTgattcaaa
attcaaacttcAACTGAAGGCTATAGATGCTGGCACGAATAATGAAATTC
AAGGTGTGgcaaaaattggagaaaaattaaaatttgaaatcaatctaCAA
GATCCGACAAATACTGTCAAAACTTCACCTCAAAACTGTTATGCTACAAG
ATATAATGGAACTGGACGGTACAACCTCATTGCAAATAGatgtgCTGGAC
AAGACGACAATACAACTCAAATCACATCGGCGAATAACGCTATCCATACC
TTCTCTTGGGAATTATTGGCGTTCAGATATTTCGGAAGTTCAGATGCAGT
CATCATTGTTTGTGAAGTTTTGATTTGCAAGAATGATCCTTTTGCAATTT
TGAGTGAAGAATGTAAAAGATGCGGACAGATACGGACAAGATACGGACAA
GATAGACGACGAAGAGATGAAGtttattcaaaagaaaacacGATTCTTGA
AAGATCGACCATTCAAACAGCTCCAATTTACATTATCGAAAGAGAAGAAG
CACCGGCCGTTGTAGTGAAGAGTGACAACTTTTTGGCAGAGCCAGCAGGA
ATATCAATCATTGTGATCCTTGCATTGTTTATGTTGGTCATTTGTTCTGT
TCTTCTTAAAAGAACATTTTGTGCCGCTGCAATTGCATCCGATAAAAAGA
ATGTTGAAAGCGGATTCGATAATCCAGCCATGCAGtgaaaaagaataaaa
caaGAATGATGTAGAAGTAATgttgactgaatttttttaaactaatttaa
agtttaaaaaaaaaacaatcgaaaCAATATTCAAAAAGAACTGCACTAAT
TTAGAATTTGTATAATCTCAACACAGCACAGTCatatttttatctaaaat
tatCTAATTGTAGCTTCATATACCCTCGTTGTAATATTTTTGCTGAGCAG
AATTAGTGTAGTGTGATAGGGTCGTAATGTCCCCATAGCATACAATCTTA
GACAACAACCaatattttagtattttttcaaagacaaatttatcatAAAG
ATTGCTTATAATTATAAATTTACTTTTAATAATTCCATATACttttgaac
tttaaaaaaacattgttttaaTGAAATTCACTGATcagaaatgggctttt
ccagaaaaaaattgaatatggggggtggaggataaaacaattttcagtga
tttaccccccggacaaagtgacttttagCCCCCCCGGACAGCGGGTTTTA
CCctccggacaagcatcagttgacccccggacaacccaaattacccccgg
acagaaaCAATTTACCctccggacaaggcaaattttgatgatttttcgct
actccccggacaatatatcctccaccccccattcacggacattttctgga
agagcctaaTATAAGTGCTTTGAAAGAGGTTCTACTACCTTTTTCCATTG
AGAAAAGTCCTCACTCCCTTTTTAATTTCCCCTTCCTACCCATTTATATT
GAGCGATTTTGGAAAAGCTTCTTTAAAAACAAGAGGCAGAAGGGGTACAC
CGTTTAACTTTGAATTCGtgaaatataataccaataagtTAGTGAGTGTA
CACAATTTATAATAAGATACAGTCAAACTCCGGAGGGGAGGGGTacacat
acccgtacccttcacttTCCTAAGTACCACACCCTCCCCCCAGGCGGTAA
AACTAATAAATACAAGCAGATAACAAACCTTTTCACCGTCTGTATTGAGC
ATAGTTTAAGTTTTCCATCGATTCATTTGCCAACAAATTTGTCAAAAAGC
TTTGTCTTCACCAAACACATAATCCATGATCAAATCGTGATCTttctgta
atatttttttttcataatttctatttttaattttatcctAGAGcatctga
aaataaataaataaatttataaatgaAACAAATAAATAACTGAAAG

Run BLAST on NCBI

protein sequence of TCONS_00072166-protein

>TCONS_00072166-protein ID=TCONS_00072166-protein|Name=TCONS_00072166-protein|organism=Clytia hemisphaerica|type=polypeptide|length=508bp
MDFYKFLTFLICLSSVTLCFGAENEAIFNGVRYYFSPTPLSWQNAEIDCI
NRGGHLTSVHSKAENDFLTDQSISRFGGVSLWYGGIRINNVFTWSDRTPF
TTTFWALGEPNGPHVENCLHMTADHIGQWNDLRCIPELRYVCKLGEGIPI
DVECSASSLKAIFNITDLDAQLLPYSIKFLGNDTCESITAASTNHIKDGK
TWIATNYTDCGTKAYHQGNQIAFEQTILIEYGSRSQQSLVYRYFNSSYTV
KCVLDRSITTNLTIDVIDRQTDQQVNGDSKFKLQLKAIDAGTNNEIQGVA
KIGEKLKFEINLQDPTNTVKTSPQNCYATRYNGTGRYNLIANRCAGQDDN
TTQITSANNAIHTFSWELLAFRYFGSSDAVIIVCEVLICKNDPFAILSEE
CKRCGQIRTRYGQDRRRRDEVYSKENTILERSTIQTAPIYIIEREEAPAV
VVKSDNFLAEPAGISIIVILALFMLVICSVLLKRTFCAAAIASDKKNVES
GFDNPAMQ

Run BLAST on NCBI

transcript from alignment at scaffold_71:408825..413940-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00072166 ID=TCONS_00072166|Name=TCONS_00072166|organism=Clytia hemisphaerica|type=transcript|length=5116bp|location=Sequence derived from alignment at scaffold_71:408825..413940- (Clytia hemisphaerica)
GGGTAACATTCACAAACAAATTCATTCACACTCACTTCAAACCAGAACAA
CTAAGGAAAGTGCAAAACTTCAATAACATTGGAAAATTCCAACTTAACAT
TCTGTCTAGTGATGGATTTTTACAAGTTTTTGACATTCCTTATTTGCTTG
AGTTCGGTTACGTTATGCTTTGGAGCCGGTAAGTAAGGATTTTCTTTTAT
TTGTAATCACACAAATTTAATACAAATTTCAGGGTATCTTTATTATCATA
ATGATGAATTTTTGGCTGATATTACCAATAAGACGGGTGTCAAGCGGGTC
TGAAATCGGGGGGGGGGGGNTAAAAAAGTTTAAATCTTCTTGATTGAAAT
CGTATGAAGAAAAAAAAATTCATTCAACAAAAGTAAGGAACCATATACTG
TTATCGTTCTCTTTCACTGTTTCAGAAAATGAAGCAATTTTTAACGGAGT
CCGATATTACTTCAGTCCAACGCCTTTGTCTTGGCAAAACGCAGAAATTG
ATTGCATTAACCGCGGAGGTCATCTTACAAGTGTGCACTCAAAAGCTGAA
AATGATTTCTTGACAGACCAAAGTATATCAAGATTTGGAGGTGTAAGCCT
TTGGTATGGTGGGATTAGAATTAACAATGTCTTTACTTGGTCCGATAGAA
CACCTTTTACGACAACATTCTGGGCTTTAGGAGAACCTAATGGTCCACAT
GTTGAAAACTGTTTACATATGACAGCTGACCATATTGGTCAGTGGAATGA
TCTTCGTTGTATTCCAGAGCTTAGATATGTTTGTAAATTAGGTGAAGGTG
AGTGATGGGCTTTCATATTAACATACAATCAACTCTCAATCTAATTCGAA
CCTCTATTACAATTTTTTTTTATAAGCAAGTGTATGCCTCTTGGTCAGGC
TCGTGTATGCTTAAGTTCTTAAAGCATCCAGGCATAGCTTATGCTTATTA
TATGCTTATGAATCATGCTTATGATTCACCCCGAGCAAAGTTGTAGTTAA
ATTTGTTCAGATTTCGGGAGCAGTGGAATGTAGCTAGCCGTGGAATGTCT
TTTTTACTTGACCGTAGAGGTCAAACCTTTTTAAACAGATAAAAAATGAC
AAATTGAAAAATATCCCAGGCTGACATATTTGCTTATGTTATGCGTAGGA
ATTCTGCAAATCTGAGCCTTCATATGCTTATAAGTGTTATGCTTATAAAA
AAACATTTCTTTAATTCTAACTACCATAAATGGCGGCCCTCCCATAAATA
AAGAAAATGGATAAAAGTTCATTTATGATCCCTCCTTTCTCAGATCACCG
ATTACTAGCCTGCGTTCGTTTGTTACTTGAAATCCCAAGTTCTAACATCA
GAGTACAGGAAAATTAAGTATAACTATTTTTTAAAAGAATCGTTTATCTC
TAGGAATTCCAATTGATGTCGAATGTTCAGCCAGTAGTCTAAAAGCAATA
TTCAATATTACTGACCTTGATGCACAACTTCTGCCATATTCAATCAAATT
CCTTGGAAACGACACGTGTGAATCAATCACTGCCGCATCCACTAATCACA
TTAAAGATGGAAAAACTTGGATTGCAACTAACTATACAGATTGTGGAACA
AAAGCGTATCACCAGGGAAACCAAATCGCTTTCGAACAAACAATTCTCAT
AGAATATGGATCTCGATCACAACAATCACTTGTCTACAGATATTTTAACT
CTTCGTACACAGTTAAATGTGTTTTGGACCGTAGTATCACAACCAATCTA
ACAATTGATGTTATAGATCGCCAAACAGATCAACAAGGTAGGTTGATTGA
TGATCAACGAGGTAGGTTGATTGATGTAAATACTGATAGATAAAAAACTT
GCCTCTTACATATCTCACATTATAAGAAAACCATCAAAGCTGGATAGAGC
TGTTGCAAATCTTGTCACATTTACTTATTTCAAGGGAAAATTGATAAATA
TTAATCATGATATGCCCAAAAATATGATGTATATTTTCCTTTTCTTCTTT
TCCTTCTTTTAGTTAATGGTGATTCAAAATTCAAACTTCAACTGAAGGCT
ATAGATGCTGGCACGAATAATGAAATTCAAGGTGTGGCAAAAATTGGAGA
AAAATTAAAATTTGAAATCAATCTACAAGATCCGACAAATACTGTCAAAA
CTTCACCTCAAAACTGTTATGCTACAAGATATAATGGAACTGGACGGTAC
AACCTCATTGCAAATAGGTATACCTAAGTTTTTTTCCTTTTTCCGCAAAA
ATAAATCCAAAAGATTTTAATGAGTTTTCAGGTAAGAAAATAGGAATACT
TCCTCCCCATTGGGAGTAAGCCCTAACCTAAGTCAGAGATCACTGCACAT
AAGCAATTTTTCAGACACACGAAAATAAATACTAATAAACCCCAGGTCTT
TGGCCCGAAAATTGGAGTTGCTTATATAAGAAAGGGCTAGTCTCTTAAAG
AAAATTTGAAAAGTATTTAAAAAAAACTTGTGACCGTTTTCTTTTAAAAG
ATGTGCTGGACAAGACGACAATACAACTCAAATCACATCGGCGAATAACG
CTATCCATACCTTCTCTTGGGAATTATTGGCGTTCAGATATTTCGGAAGT
TCAGATGCAGTCATCATTGTTTGTGAAGTTTTGATTTGCAAGAATGATCC
TTTTGCAATTTTGAGTGAAGAATGTAAAAGATGCGGACAGATACGGACAA
GATACGGACAAGATAGACGACGAAGAGATGAAGTTTATTCAAAAGAAAAC
ACGATTCTTGAAAGATCGACCATTCAAACAGCTCCAATTTACATTATCGA
AAGAGAAGGTATACCACGTTCACCAGCTATAAATAATAAAAGGCTTCTTC
TAGGGTAGAAAAGGAACTTGCTATAACCATTCCGATTGGATACCTTAAGA
GAACTAATTTTGGTGATAACTAACTAATAACAGCATCAGAATTCTTGAAA
AAAATTATTTGGCAAGGAACTGTTTTTCGAAGAATTTGTAGACTGGAAGT
CGTTTATAATGCGTGTAATACTAATAATACCAATACTAATAATAATAATA
ACACGGGATTTAGTTTGTATAAACGACTGGAAGAATCCGGTGTTCCAGCC
TTATAGATACAGGGGCTAGCTACGCAGAAACTTGCGTAGCGAGAANNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNAATATTGACACTTTTCTTTTGTTTGGTGTTAGTG
CACAAAGGTTTCTAGACGACTAAAATTTCTCCCTTTATTACTTTTTGCTT
TATTTCTACTATGTATGAATTAGTCGTCTAGCTTGCTAGACTAAAGAATT
TGCCAAATTCAACTAAAATAGTCTTCGCCAAAATCGTAACAAAAGCTCAT
TTTAAATGCCTTGAACATTGAATATCTTTTGATCAAATGAGGAATTAATT
GTTATATAATTATAAAATCCGCCAATGAAGTCTATTCTCTATAAGGATCG
GGGTTGAGAGGTCCGGTACGAAATACAATAAAAAAATCATAATTTTTTTA
TCCTCATCATTTTTCAGAAGCACCGGCCGTTGTAGTGAAGAGTGACAACT
TTTTGGCAGAGCCAGCAGGAATATCAATCATTGTGATCCTTGCATTGTTT
ATGTTGGTCATTTGTTCTGTTCTTCTTAAAAGAACATTTTGTGCCGCTGC
AATTGCATCCGATAAAAAGAATGTTGAAAGCGGATTCGATAATCCAGCCA
TGCAGTGAAAAAGAATAAAACAAGAATGATGTAGAAGTAATGTTGACTGA
ATTTTTTTAAACTAATTTAAAGTTTAAAAAAAAAACAATCGAAACAATAT
TCAAAAAGAACTGCACTAATTTAGAATTTGTATAATCTCAACACAGCACA
GTCATATTTTTATCTAAAATTATCTAATTGTAGCTTCATATACCCTCGTT
GTAATATTTTTGCTGAGCAGAATTAGTGTAGTGTGATAGGGTCGTAATGT
CCCCATAGCATACAATCTTAGACAACAACCAATATTTTAGTATTTTTTCA
AAGACAAATTTATCATAAAGATTGCTTATAATTATAAATTTACTTTTAAT
AATTCCATATACTTTTGAACTTTAAAAAAACATTGTTTTAATGAAATTCA
CTGATCAGAAATGGGCTTTTCCAGAAAAAAATTGAATATGGGGGGTGGAG
GATAAAACAATTTTCAGTGATTTACCCCCCGGACAAAGTGACTTTTAGCC
CCCCCGGACAGCGGGTTTTACCCTCCGGACAAGCATCAGTTGACCCCCGG
ACAACCCAAATTACCCCCGGACAGAAACAATTTACCCTCCGGACAAGGCA
AATTTTGATGATTTTTCGCTACTCCCCGGACAATATATCCTCCACCCCCC
ATTCACGGACATTTTCTGGAAGAGCCTAATATAAGTGCTTTGAAAGAGGT
TCTACTACCTTTTTCCATTGAGAAAAGTCCTCACTCCCTTTTTAATTTCC
CCTTCCTACCCATTTATATTGAGCGATTTTGGAAAAGCTTCTTTAAAAAC
AAGAGGCAGAAGGGGTACACCGTTTAACTTTGAATTCGTGAAATATAATA
CCAATAAGTTAGTGAGTGTACACAATTTATAATAAGATACAGTCAAACTC
CGGAGGGGAGGGGTACACATACCCGTACCCTTCACTTTCCTAAGTACCAC
ACCCTCCCCCCAGGCGGTAAAACTAATAAATACAAGCAGATAACAAACCT
TTTCACCGTCTGTATTGAGCATAGTTTAAGTTTTCCATCGATTCATTTGC
CAACAAATTTGTCAAAAAGCTTTGTCTTCACCAAACACATAATCCATGAT
CAAATCGTGATCTTTCTGTAATATTTTTTTTTCATAATTTCTATTTTTAA
TTTTATCCTAGAGCATCTGAAAATAAATAAATAAATTTATAAATGAAACA
AATAAATAACTGAAAG

Coding sequence (CDS) from alignment at scaffold_71:408825..413940-

>TCONS_00072166 ID=TCONS_00072166|Name=TCONS_00072166|organism=Clytia hemisphaerica|type=CDS|length=9162bp|location=Sequence derived from alignment at scaffold_71:408825..413940- (Clytia hemisphaerica)
AAGCACCGGCCGTTGTAGTGAAGAGTGACAACTTTTTGGCAGAGCCAGCA
GGAATATCAATCATTGTGATCCTTGCATTGTTTATGTTGGTCATTTGTTC
TGTTCTTCTTAAAAGAACATTTTGTGCCGCTGCAATTGCATCCGATAAAA
AGAATGTTGAAAGCGGATTCGATAATCCAGCCATGCAGTGAATGTGCTGG
ACAAGACGACAATACAACTCAAATCACATCGGCGAATAACGCTATCCATA
CCTTCTCTTGGGAATTATTGGCGTTCAGATATTTCGGAAGTTCAGATGCA
GTCATCATTGTTTGTGAAGTTTTGATTTGCAAGAATGATCCTTTTGCAAT
TTTGAGTGAAGAATGTAAAAGATGCGGACAGATACGGACAAGATACGGAC
AAGATAGACGACGAAGAGATGAAGTTTATTCAAAAGAAAACACGATTCTT
GAAAGATCGACCATTCAAACAGCTCCAATTTACATTATCGAAAGAGAAGT
TAATGGTGATTCAAAATTCAAACTTCAACTGAAGGCTATAGATGCTGGCA
CGAATAATGAAATTCAAGGTGTGGCAAAAATTGGAGAAAAATTAAAATTT
GAAATCAATCTACAAGATCCGACAAATACTGTCAAAACTTCACCTCAAAA
CTGTTATGCTACAAGATATAATGGAACTGGACGGTACAACCTCATTGCAA
ATAGGAATTCCAATTGATGTCGAATGTTCAGCCAGTAGTCTAAAAGCAAT
ATTCAATATTACTGACCTTGATGCACAACTTCTGCCATATTCAATCAAAT
TCCTTGGAAACGACACGTGTGAATCAATCACTGCCGCATCCACTAATCAC
ATTAAAGATGGAAAAACTTGGATTGCAACTAACTATACAGATTGTGGAAC
AAAAGCGTATCACCAGGGAAACCAAATCGCTTTCGAACAAACAATTCTCA
TAGAATATGGATCTCGATCACAACAATCACTTGTCTACAGATATTTTAAC
TCTTCGTACACAGTTAAATGTGTTTTGGACCGTAGTATCACAACCAATCT
AACAATTGATGTTATAGATCGCCAAACAGATCAACAAGAAAATGAAGCAA
TTTTTAACGGAGTCCGATATTACTTCAGTCCAACGCCTTTGTCTTGGCAA
AACGCAGAAATTGATTGCATTAACCGCGGAGGTCATCTTACAAGTGTGCA
CTCAAAAGCTGAAAATGATTTCTTGACAGACCAAAGTATATCAAGATTTG
GAGGTGTAAGCCTTTGGTATGGTGGGATTAGAATTAACAATGTCTTTACT
TGGTCCGATAGAACACCTTTTACGACAACATTCTGGGCTTTAGGAGAACC
TAATGGTCCACATGTTGAAAACTGTTTACATATGACAGCTGACCATATTG
GTCAGTGGAATGATCTTCGTTGTATTCCAGAGCTTAGATATGTTTGTAAA
TTAGGTGAAGATGGATTTTTACAAGTTTTTGACATTCCTTATTTGCTTGA
GTTCGGTTACGTTATGCTTTGGAGCCGAAGCACCGGCCGTTGTAGTGAAG
AGTGACAACTTTTTGGCAGAGCCAGCAGGAATATCAATCATTGTGATCCT
TGCATTGTTTATGTTGGTCATTTGTTCTGTTCTTCTTAAAAGAACATTTT
GTGCCGCTGCAATTGCATCCGATAAAAAGAATGTTGAAAGCGGATTCGAT
AATCCAGCCATGCAGTGAATGTGCTGGACAAGACGACAATACAACTCAAA
TCACATCGGCGAATAACGCTATCCATACCTTCTCTTGGGAATTATTGGCG
TTCAGATATTTCGGAAGTTCAGATGCAGTCATCATTGTTTGTGAAGTTTT
GATTTGCAAGAATGATCCTTTTGCAATTTTGAGTGAAGAATGTAAAAGAT
GCGGACAGATACGGACAAGATACGGACAAGATAGACGACGAAGAGATGAA
GTTTATTCAAAAGAAAACACGATTCTTGAAAGATCGACCATTCAAACAGC
TCCAATTTACATTATCGAAAGAGAAGTTAATGGTGATTCAAAATTCAAAC
TTCAACTGAAGGCTATAGATGCTGGCACGAATAATGAAATTCAAGGTGTG
GCAAAAATTGGAGAAAAATTAAAATTTGAAATCAATCTACAAGATCCGAC
AAATACTGTCAAAACTTCACCTCAAAACTGTTATGCTACAAGATATAATG
GAACTGGACGGTACAACCTCATTGCAAATAGGAATTCCAATTGATGTCGA
ATGTTCAGCCAGTAGTCTAAAAGCAATATTCAATATTACTGACCTTGATG
CACAACTTCTGCCATATTCAATCAAATTCCTTGGAAACGACACGTGTGAA
TCAATCACTGCCGCATCCACTAATCACATTAAAGATGGAAAAACTTGGAT
TGCAACTAACTATACAGATTGTGGAACAAAAGCGTATCACCAGGGAAACC
AAATCGCTTTCGAACAAACAATTCTCATAGAATATGGATCTCGATCACAA
CAATCACTTGTCTACAGATATTTTAACTCTTCGTACACAGTTAAATGTGT
TTTGGACCGTAGTATCACAACCAATCTAACAATTGATGTTATAGATCGCC
AAACAGATCAACAAGAAAATGAAGCAATTTTTAACGGAGTCCGATATTAC
TTCAGTCCAACGCCTTTGTCTTGGCAAAACGCAGAAATTGATTGCATTAA
CCGCGGAGGTCATCTTACAAGTGTGCACTCAAAAGCTGAAAATGATTTCT
TGACAGACCAAAGTATATCAAGATTTGGAGGTGTAAGCCTTTGGTATGGT
GGGATTAGAATTAACAATGTCTTTACTTGGTCCGATAGAACACCTTTTAC
GACAACATTCTGGGCTTTAGGAGAACCTAATGGTCCACATGTTGAAAACT
GTTTACATATGACAGCTGACCATATTGGTCAGTGGAATGATCTTCGTTGT
ATTCCAGAGCTTAGATATGTTTGTAAATTAGGTGAAGATGGATTTTTACA
AGTTTTTGACATTCCTTATTTGCTTGAGTTCGGTTACGTTATGCTTTGGA
GCCGAAGCACCGGCCGTTGTAGTGAAGAGTGACAACTTTTTGGCAGAGCC
AGCAGGAATATCAATCATTGTGATCCTTGCATTGTTTATGTTGGTCATTT
GTTCTGTTCTTCTTAAAAGAACATTTTGTGCCGCTGCAATTGCATCCGAT
AAAAAGAATGTTGAAAGCGGATTCGATAATCCAGCCATGCAGTGAATGTG
CTGGACAAGACGACAATACAACTCAAATCACATCGGCGAATAACGCTATC
CATACCTTCTCTTGGGAATTATTGGCGTTCAGATATTTCGGAAGTTCAGA
TGCAGTCATCATTGTTTGTGAAGTTTTGATTTGCAAGAATGATCCTTTTG
CAATTTTGAGTGAAGAATGTAAAAGATGCGGACAGATACGGACAAGATAC
GGACAAGATAGACGACGAAGAGATGAAGTTTATTCAAAAGAAAACACGAT
TCTTGAAAGATCGACCATTCAAACAGCTCCAATTTACATTATCGAAAGAG
AAGTTAATGGTGATTCAAAATTCAAACTTCAACTGAAGGCTATAGATGCT
GGCACGAATAATGAAATTCAAGGTGTGGCAAAAATTGGAGAAAAATTAAA
ATTTGAAATCAATCTACAAGATCCGACAAATACTGTCAAAACTTCACCTC
AAAACTGTTATGCTACAAGATATAATGGAACTGGACGGTACAACCTCATT
GCAAATAGGAATTCCAATTGATGTCGAATGTTCAGCCAGTAGTCTAAAAG
CAATATTCAATATTACTGACCTTGATGCACAACTTCTGCCATATTCAATC
AAATTCCTTGGAAACGACACGTGTGAATCAATCACTGCCGCATCCACTAA
TCACATTAAAGATGGAAAAACTTGGATTGCAACTAACTATACAGATTGTG
GAACAAAAGCGTATCACCAGGGAAACCAAATCGCTTTCGAACAAACAATT
CTCATAGAATATGGATCTCGATCACAACAATCACTTGTCTACAGATATTT
TAACTCTTCGTACACAGTTAAATGTGTTTTGGACCGTAGTATCACAACCA
ATCTAACAATTGATGTTATAGATCGCCAAACAGATCAACAAGAAAATGAA
GCAATTTTTAACGGAGTCCGATATTACTTCAGTCCAACGCCTTTGTCTTG
GCAAAACGCAGAAATTGATTGCATTAACCGCGGAGGTCATCTTACAAGTG
TGCACTCAAAAGCTGAAAATGATTTCTTGACAGACCAAAGTATATCAAGA
TTTGGAGGTGTAAGCCTTTGGTATGGTGGGATTAGAATTAACAATGTCTT
TACTTGGTCCGATAGAACACCTTTTACGACAACATTCTGGGCTTTAGGAG
AACCTAATGGTCCACATGTTGAAAACTGTTTACATATGACAGCTGACCAT
ATTGGTCAGTGGAATGATCTTCGTTGTATTCCAGAGCTTAGATATGTTTG
TAAATTAGGTGAAGATGGATTTTTACAAGTTTTTGACATTCCTTATTTGC
TTGAGTTCGGTTACGTTATGCTTTGGAGCCGAAGCACCGGCCGTTGTAGT
GAAGAGTGACAACTTTTTGGCAGAGCCAGCAGGAATATCAATCATTGTGA
TCCTTGCATTGTTTATGTTGGTCATTTGTTCTGTTCTTCTTAAAAGAACA
TTTTGTGCCGCTGCAATTGCATCCGATAAAAAGAATGTTGAAAGCGGATT
CGATAATCCAGCCATGCAGTGAATGTGCTGGACAAGACGACAATACAACT
CAAATCACATCGGCGAATAACGCTATCCATACCTTCTCTTGGGAATTATT
GGCGTTCAGATATTTCGGAAGTTCAGATGCAGTCATCATTGTTTGTGAAG
TTTTGATTTGCAAGAATGATCCTTTTGCAATTTTGAGTGAAGAATGTAAA
AGATGCGGACAGATACGGACAAGATACGGACAAGATAGACGACGAAGAGA
TGAAGTTTATTCAAAAGAAAACACGATTCTTGAAAGATCGACCATTCAAA
CAGCTCCAATTTACATTATCGAAAGAGAAGTTAATGGTGATTCAAAATTC
AAACTTCAACTGAAGGCTATAGATGCTGGCACGAATAATGAAATTCAAGG
TGTGGCAAAAATTGGAGAAAAATTAAAATTTGAAATCAATCTACAAGATC
CGACAAATACTGTCAAAACTTCACCTCAAAACTGTTATGCTACAAGATAT
AATGGAACTGGACGGTACAACCTCATTGCAAATAGGAATTCCAATTGATG
TCGAATGTTCAGCCAGTAGTCTAAAAGCAATATTCAATATTACTGACCTT
GATGCACAACTTCTGCCATATTCAATCAAATTCCTTGGAAACGACACGTG
TGAATCAATCACTGCCGCATCCACTAATCACATTAAAGATGGAAAAACTT
GGATTGCAACTAACTATACAGATTGTGGAACAAAAGCGTATCACCAGGGA
AACCAAATCGCTTTCGAACAAACAATTCTCATAGAATATGGATCTCGATC
ACAACAATCACTTGTCTACAGATATTTTAACTCTTCGTACACAGTTAAAT
GTGTTTTGGACCGTAGTATCACAACCAATCTAACAATTGATGTTATAGAT
CGCCAAACAGATCAACAAGAAAATGAAGCAATTTTTAACGGAGTCCGATA
TTACTTCAGTCCAACGCCTTTGTCTTGGCAAAACGCAGAAATTGATTGCA
TTAACCGCGGAGGTCATCTTACAAGTGTGCACTCAAAAGCTGAAAATGAT
TTCTTGACAGACCAAAGTATATCAAGATTTGGAGGTGTAAGCCTTTGGTA
TGGTGGGATTAGAATTAACAATGTCTTTACTTGGTCCGATAGAACACCTT
TTACGACAACATTCTGGGCTTTAGGAGAACCTAATGGTCCACATGTTGAA
AACTGTTTACATATGACAGCTGACCATATTGGTCAGTGGAATGATCTTCG
TTGTATTCCAGAGCTTAGATATGTTTGTAAATTAGGTGAAGATGGATTTT
TACAAGTTTTTGACATTCCTTATTTGCTTGAGTTCGGTTACGTTATGCTT
TGGAGCCGAAGCACCGGCCGTTGTAGTGAAGAGTGACAACTTTTTGGCAG
AGCCAGCAGGAATATCAATCATTGTGATCCTTGCATTGTTTATGTTGGTC
ATTTGTTCTGTTCTTCTTAAAAGAACATTTTGTGCCGCTGCAATTGCATC
CGATAAAAAGAATGTTGAAAGCGGATTCGATAATCCAGCCATGCAGTGAA
TGTGCTGGACAAGACGACAATACAACTCAAATCACATCGGCGAATAACGC
TATCCATACCTTCTCTTGGGAATTATTGGCGTTCAGATATTTCGGAAGTT
CAGATGCAGTCATCATTGTTTGTGAAGTTTTGATTTGCAAGAATGATCCT
TTTGCAATTTTGAGTGAAGAATGTAAAAGATGCGGACAGATACGGACAAG
ATACGGACAAGATAGACGACGAAGAGATGAAGTTTATTCAAAAGAAAACA
CGATTCTTGAAAGATCGACCATTCAAACAGCTCCAATTTACATTATCGAA
AGAGAAGTTAATGGTGATTCAAAATTCAAACTTCAACTGAAGGCTATAGA
TGCTGGCACGAATAATGAAATTCAAGGTGTGGCAAAAATTGGAGAAAAAT
TAAAATTTGAAATCAATCTACAAGATCCGACAAATACTGTCAAAACTTCA
CCTCAAAACTGTTATGCTACAAGATATAATGGAACTGGACGGTACAACCT
CATTGCAAATAGGAATTCCAATTGATGTCGAATGTTCAGCCAGTAGTCTA
AAAGCAATATTCAATATTACTGACCTTGATGCACAACTTCTGCCATATTC
AATCAAATTCCTTGGAAACGACACGTGTGAATCAATCACTGCCGCATCCA
CTAATCACATTAAAGATGGAAAAACTTGGATTGCAACTAACTATACAGAT
TGTGGAACAAAAGCGTATCACCAGGGAAACCAAATCGCTTTCGAACAAAC
AATTCTCATAGAATATGGATCTCGATCACAACAATCACTTGTCTACAGAT
ATTTTAACTCTTCGTACACAGTTAAATGTGTTTTGGACCGTAGTATCACA
ACCAATCTAACAATTGATGTTATAGATCGCCAAACAGATCAACAAGAAAA
TGAAGCAATTTTTAACGGAGTCCGATATTACTTCAGTCCAACGCCTTTGT
CTTGGCAAAACGCAGAAATTGATTGCATTAACCGCGGAGGTCATCTTACA
AGTGTGCACTCAAAAGCTGAAAATGATTTCTTGACAGACCAAAGTATATC
AAGATTTGGAGGTGTAAGCCTTTGGTATGGTGGGATTAGAATTAACAATG
TCTTTACTTGGTCCGATAGAACACCTTTTACGACAACATTCTGGGCTTTA
GGAGAACCTAATGGTCCACATGTTGAAAACTGTTTACATATGACAGCTGA
CCATATTGGTCAGTGGAATGATCTTCGTTGTATTCCAGAGCTTAGATATG
TTTGTAAATTAGGTGAAGATGGATTTTTACAAGTTTTTGACATTCCTTAT
TTGCTTGAGTTCGGTTACGTTATGCTTTGGAGCCGAAGCACCGGCCGTTG
TAGTGAAGAGTGACAACTTTTTGGCAGAGCCAGCAGGAATATCAATCATT
GTGATCCTTGCATTGTTTATGTTGGTCATTTGTTCTGTTCTTCTTAAAAG
AACATTTTGTGCCGCTGCAATTGCATCCGATAAAAAGAATGTTGAAAGCG
GATTCGATAATCCAGCCATGCAGTGAATGTGCTGGACAAGACGACAATAC
AACTCAAATCACATCGGCGAATAACGCTATCCATACCTTCTCTTGGGAAT
TATTGGCGTTCAGATATTTCGGAAGTTCAGATGCAGTCATCATTGTTTGT
GAAGTTTTGATTTGCAAGAATGATCCTTTTGCAATTTTGAGTGAAGAATG
TAAAAGATGCGGACAGATACGGACAAGATACGGACAAGATAGACGACGAA
GAGATGAAGTTTATTCAAAAGAAAACACGATTCTTGAAAGATCGACCATT
CAAACAGCTCCAATTTACATTATCGAAAGAGAAGTTAATGGTGATTCAAA
ATTCAAACTTCAACTGAAGGCTATAGATGCTGGCACGAATAATGAAATTC
AAGGTGTGGCAAAAATTGGAGAAAAATTAAAATTTGAAATCAATCTACAA
GATCCGACAAATACTGTCAAAACTTCACCTCAAAACTGTTATGCTACAAG
ATATAATGGAACTGGACGGTACAACCTCATTGCAAATAGGAATTCCAATT
GATGTCGAATGTTCAGCCAGTAGTCTAAAAGCAATATTCAATATTACTGA
CCTTGATGCACAACTTCTGCCATATTCAATCAAATTCCTTGGAAACGACA
CGTGTGAATCAATCACTGCCGCATCCACTAATCACATTAAAGATGGAAAA
ACTTGGATTGCAACTAACTATACAGATTGTGGAACAAAAGCGTATCACCA
GGGAAACCAAATCGCTTTCGAACAAACAATTCTCATAGAATATGGATCTC
GATCACAACAATCACTTGTCTACAGATATTTTAACTCTTCGTACACAGTT
AAATGTGTTTTGGACCGTAGTATCACAACCAATCTAACAATTGATGTTAT
AGATCGCCAAACAGATCAACAAGAAAATGAAGCAATTTTTAACGGAGTCC
GATATTACTTCAGTCCAACGCCTTTGTCTTGGCAAAACGCAGAAATTGAT
TGCATTAACCGCGGAGGTCATCTTACAAGTGTGCACTCAAAAGCTGAAAA
TGATTTCTTGACAGACCAAAGTATATCAAGATTTGGAGGTGTAAGCCTTT
GGTATGGTGGGATTAGAATTAACAATGTCTTTACTTGGTCCGATAGAACA
CCTTTTACGACAACATTCTGGGCTTTAGGAGAACCTAATGGTCCACATGT
TGAAAACTGTTTACATATGACAGCTGACCATATTGGTCAGTGGAATGATC
TTCGTTGTATTCCAGAGCTTAGATATGTTTGTAAATTAGGTGAAGATGGA
TTTTTACAAGTTTTTGACATTCCTTATTTGCTTGAGTTCGGTTACGTTAT
GCTTTGGAGCCG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_044818	XLOC_044818	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00072166-protein	TCONS_00072166-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_71	supercontig	scaffold_71:408825..413940 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	32.3009	39.784	0	0.0603887	0.413152	0.960664	292.495	390.953	0	0	0	0	0	0	0	0	0	0

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR001304	C-type_lectin-like
IPR001507	ZP_dom
IPR016186	C-type_lectin-like/link
IPR018378	C-type_lectin_CS
IPR016187	CTDL_fold

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00072166 vs. Swiss-Prot (Human)

BLAST of TCONS_00072166 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00072166 (transcript) - C. hemisphaerica