TCONS_00072110 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072110
Unique NameTCONS_00072110
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2180

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072110 ID=TCONS_00072110|Name=TCONS_00072110|organism=Clytia hemisphaerica|type=transcript|length=2180bp
CCAAAACTGTGACTTTTTCCCGATGTTCTCCCGTCTTTTAAAACCAAATC
GGATTATCGcgccaaaccaaaacaaagatggcgacgAAAAAGAAGCGTGC
TGCTGACAATTATTTGACTCACGATAATTGGGATCAAGAAGATGACAGTG
AAGAACCAGAGGATCCTGGTGTTTTCAAACCTGCAGATGAAGAAGTTTTA
GCTCAAAGAACaaTTCGAAAAGCTAAAAGAAGGGGACTGAGTTCTGCTTC
ATCTGGTGAAGAAAAGTCAAATCCATTTGCCAAGTTTGGAGGCTTTGGTG
GAGGAAACACAAGTACACCTACGTTAACCTTTGGTGCTGCTAAGGTTATA
ACACCTGCAAAACCTGTTGCTCCTCTGGCTGCAATGAATACTAATAAAAG
TACACAAAACAACTTTTGGGGAAACAAAACAGAGGaccagaaaaaagatt
ttttctcaaacagAAAACCAGCAAATGAAAAGCCGCTCAATGAATCGGCA
ACTTCAGACACTAATAACAACAGTGATAAAGAAAACGGCTCTAATAAGAA
AACAgacgaaaatttccaaaaagaactATGCCAATTAAATATGAGTGTTT
TaagatttattcaaaaaaatcttgatGACAACCCGGTCATCGATTTACAG
CCTGTCTTCAATGACTACAAAAAACATATAGAAGTACTGAACGCTAAATA
CGAACTAGAGGCATCCAGCACAGAATCAGACGCGTCAACAAAAACAGAAT
CTAAACCAGAACCAACACAAGCATCATTCAAAACACCGCTTACATCAAAA
ACACCTGAAAGTGCTCTTGCATCAGCACCAGCCGTATCATCTGCTGCACC
ACCCTTTTCATTCAAATCGTCAACTCCAATACCAGCTAACCCCTTTGGTG
aattgaaaacaaactcAGTGTTCAATGCTGCAGCATCGCCATTTTCATTC
AAACCATCGGCCGCTTCATCTGCAACCACCACAGGAGGAACATCAACGAA
AGTCCCTGAAACTGTTAAAGAAGAAAATGCTGACGATGAAGATAAAGTGC
CGGAACCAGAACGAAAAACGGTTGTTGAATCTGATGCGTTCCACACAACA
CGATGTAAACTATTCTTCAAGAAAGGTGCAGAATGGAAAGAACTTGGTAT
CGGTATGTTATATCTGAAACCTGGTTCTGACGACACCAAAGTACAACTCC
TTGTCAGAATGGAGACAAGTACTGGTAAAGTCCTCATAAATGTGACAGTG
ACCAATGATACGCCGACCTCTAGAAGTGGTAAAAATAACGTCATGGTTGT
AACTATTCCCAATCCACCAGTATTTTCAAAACCAGAAGAAGGGGACAATG
GTAAACCGTGTACTTATTTGATTCGAGTTAAAGGTACCACTGAAGCAGAT
GAGCTatttggaaaaatcaaaaaataaaatctatgcTGGGTGGCAATTTT
TAAGCCAAAGTGAATTATGTTATCACTGATGGTGTCATGAAAGTCACTAA
AATGACTCTGGGATCAGCTCATGTTCAATGAAATAGTACAATGCAAATAA
TGCAATCCTTCATGGTCGGCGGGTAATTTTGATTTGGATCGGAAAAATTG
AGATGAAAGTTTTCATAACCCAGTATAATGATGTGCTAGAAATTAGGAGG
GTTGTGGCTGACGGATAGTATTTATTTTCCAATAGGGTAAAAATCATAGA
CATTGAATATTGATGAACAACTGGATATactttaaattaaatttgaattt
aaaacccGTCTTGTCTGACCTGATTGCCAATAATGATATTTGCACTTAAA
GAATACTACTTGTATTTCCTATTGTAAActtaagatttttaaatttttag
aaaaatccacAAAACTTTCCTtcattctttgtgtttttgtttattaatga
atatattttttctttttattacatcATAGCTTTTTAAAATACAACTTTTA
TGTATTTCAAACGTAGCCGctatttcttgattttgatcAATCTTGAAAAG
GTCCCAATCTGCTGCAGATTACATCGAGACAGACTTGAGGATCCCCCTAG
TCAACAACAAGACAAAAGGTTATAATATTTCAACAATTGCCCTTAAGGTG
GTTAACCCTTCAAAGACGCCACGACGCTTGTATAAGATATGGAGTATTTA
CCTAATTTCccatttgaattttaaattgca
Run BLAST on NCBI

protein sequence of TCONS_00072110-protein

>TCONS_00072110-protein ID=TCONS_00072110-protein|Name=TCONS_00072110-protein|organism=Clytia hemisphaerica|type=polypeptide|length=449bp
MATKKKRAADNYLTHDNWDQEDDSEEPEDPGVFKPADEEVLAQRTIRKAK
RRGLSSASSGEEKSNPFAKFGGFGGGNTSTPTLTFGAAKVITPAKPVAPL
AAMNTNKSTQNNFWGNKTEDQKKDFFSNRKPANEKPLNESATSDTNNNSD
KENGSNKKTDENFQKELCQLNMSVLRFIQKNLDDNPVIDLQPVFNDYKKH
IEVLNAKYELEASSTESDASTKTESKPEPTQASFKTPLTSKTPESALASA
PAVSSAAPPFSFKSSTPIPANPFGELKTNSVFNAAASPFSFKPSAASSAT
TTGGTSTKVPETVKEENADDEDKVPEPERKTVVESDAFHTTRCKLFFKKG
AEWKELGIGMLYLKPGSDDTKVQLLVRMETSTGKVLINVTVTNDTPTSRS
GKNNVMVVTIPNPPVFSKPEEGDNGKPCTYLIRVKGTTEADELFGKIKK
Run BLAST on NCBI

transcript from alignment at scaffold_71:264343..276805+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072110 ID=TCONS_00072110|Name=TCONS_00072110|organism=Clytia hemisphaerica|type=transcript|length=12463bp|location=Sequence derived from alignment at scaffold_71:264343..276805+ (Clytia hemisphaerica)
CCAAAACTGTGACTTTTTCCCGATGTTCTCCCGTCTTTTAAAACCAAATC
GGATTATCGcgccaaaccaaaacaaagatggcgacgAAAAAGAAGCGTGC
TGCTGACAATTATTTGACTCACGATAATTGGGATCAAGAAGATGACAGTG
AAGAACCAGAGGTGAATttcttatttcaattttatgctATAATTTCCTGt
attgaaattatttaagttttttttagtaaaattaaTTGTAAAAGGGGATA
CGCACAAAATGAAAGTCTTGGTTCGCAAGAAGACAGTTAGCCAcacggca
ggtacaaaatgcataaaacataatgcatattgcataatgcatattagtat
tgtgtaatttacagagcgattttatattttcaaaaactctcctttgtaca
ggctaaaaatcgcgaaaaccTCCAATCaggggatttccccagacatgata
tttacttttcgaattcgaacgaaagagaaaacattcgaatcataacatcA
AAGGGTTTTCCGTGAGCATAAATAGTAAGAAGATGTATgcatgcaacaga
tcagaaaggttcCCCCTTcgtctttctcaaaaaaggtaatacacataaac
attcgaatgtaaaaagattcgaagtctattttctttagCTTTCGCATGAA
CTTCATGAAGctcttttttaatttatattggctggatattggcttatcta
acaaaaagcattcacatggttaatgctttgtaaaagggaaaacccgttga
aatttattagcaattgttcgaaaagaataaagatcttgctataaaattta
cgttttcgagttagaaaagtaatatacggaggagatattttcgtgttttt
tctacactatgctaagttctgtaaattacaaaaatgaaaatcaaaatggg
gacaagcattttcagtgaatcatgaattttcttcatcattcaaaatacaa
atttacagctttctatcctttattttctggtagaaaatggtatatttgtt
tcgTTGAAAGTagtatctttcaaattctccttattatatcCTCTattatt
gacatttttcaaatattatgcattatgcattatgcaatatgcattatgtt
ttatgcattttggacctgccggttagccacactagcgtcccgccatccaa
aatgcgtatcaaagattaatgctgcgaaagcgctatatcgtttacttgac
tctcaagtaAAAAAgtgcaccgcaaaacttctaaagggattcatgaaaaa
ataacccggcgctttttaatgaaattaacattttcaaaaactttgagaaa
ttgcctaaaatttgagccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
tatctcccggaaattttgccggacctcaaacaatgacccatttacatgtg
cgtaattgtttttactttagcgtataaacaaggccttaaaaatcgaagag
CTGTCTCGGAAATTGAaagacaaattttggttggttgattttggctgctg
cacgttttatttgtttccaactttcaagttttaattaatgtCTTGCGAat
ttgattcaggtaactctcatccttgttgttgaaatgtatcctgtagatga
ctgatgttgttttttctgaaagctagatttcctagtgtgactaactggaa
GAAGGATAAGAATACTGTCAAAAGGCTACAAAAGTAGATTGTGGTTGTTT
GGGATGGAGAGCGCAATGGTTATTGTCGCTTCTTTGAGTCACAATTGTCC
AATAATCGCAACCCACCTACCATTTCTGATGGACACAAATGAGAGTAGTG
Atagtatagacctttttgcctttccatatccgccatattgaattgtatgc
aaaaattatggtggccgaattgtcgtggcgtggtgaaattcccttagaaa
gtatggaaaacatatgcaaaaagaaagtaataatgtaaaacttacatgca
taattggtattatattaaagtgtaatcttgtagtagaaaaaagattaaat
ttgctgcttttgaaaactagaaataatcaaattcgctcatctcttcacgt
gcgtttggtttgggaacgcgaaacacgaacgcaaactacccatgtctaaa
cttttcaatatatctccagaactatgaaaaaatcataagcatcagtcaaa
tactcgtcagttacatcaatatgccttcttacctgtctttaaaaatatga
ataaaagtaatcacggaaaaggacgcgaaaaaaaaagacataagtgtgag
aacagagtaatcaaactcgtttaGAAAAAGTAcctagaagtcataaaaaa
tcaacctgaataaatgcaatcgaaatcccagagaaTTTCGTAAtccccca
aacaacattacattactatgtcaaactcccattacataaattttacaatt
acgtcagagtagactacgctcgccaccgaagaggtttatttggaaagggt
aattacattttattgttcgcttcttttttaaagattggccgggttggaaa
agtaagaatttctttgtacatattttacataccccaaatatttaggaggc
tgagttttaaacaaatggtcaagttgaaacgaacgataaatgtatctagg
tctgttttatttaccccctggtgacttaacaaaagagacttatcgatatt
acaatccaattattgaaagttgtctcggcctttttataatgagcgagaca
tacgttctctgattacacaattttcatattgacattttcgaggcattttg
atgtatctgttcgttcatctatttaagattgaagacaaaaatttgcgaaa
gNtgtcttgtagtaactgcgtgcccccctgtcagaactaacagatttttt
gaaattctgtaaaaagatccaagttcctgaatagttttactatgttctgt
gaaaaaatcaagacaaaaatttgcgaagaaaaataaaccttgaacacaaa
aaatgctttttaaacacttttttccaccgaaaaacaaataacttttatag
tcttaccttccccaaacattgaagaagcctctactaattaaagtaaatga
gataagataagataaaaccttaaaatcaaccagaatttacaacctttcat
ctaaagcaaaagacgtgcttttctcgccgccattttgttttagaatgaga
attctagagaattccattcgtttccagctcccacggtcttttttcatcca
atcagatcgcgcgatttcactttcgctttctctagtcaaataagactgcg
ggatttgagtcatgtgacatctctattaaaaaacccACGCGAAATatagg
gggtcacactactggctacaggaactgaaagcaagcaattaaggccaata
tttttggtttttctgaaggacaaaaggtataggaagctttattgaaagag
ggataaggctgggacaatctattcAAAAGATATAGacataaaaaaggcac
ttttttgggtgataattaagattttacttagaaactttaattctcttacc
cccgtctcgggcccccctgatatgagcaagggaaccatgatggccacgtg
cgtttgcgtagggtaaaatggcgaaatgcgaaaatcgaatttggcaaaaa
aaatttgaaaaatgaccctacaagatttgactatatctttttattccatg
aagagattactttcaaataaaaaatgtattaacaatgaatgggtaagctt
tctagaaatccaaacatactgtaaattgaaaagcttttaccaaaaattag
cactttaggatcagaaacagtcaaaaaccagctttttccaattttcttcg
agttacatgaattaattccttgtttgttttgatctgaaattttcagtagg
ggcaGGTAGGGGCATAGTTtagtttgttttcattttctgccattttgaga
aaaaaaaagaccaatcaaaaggcaGTTCGAACGTCAAATGACGTCAcata
caaatcaaaaaattttaaaaaagttatTGATAAAATTTGTCTTACCATAC
CATAGAAAACTGACTCATACATTTGAGCAGAACAAGTTTtggaaaaacaa
attatatGGCTGAATAGCAGAAGCATTCAGCTCatgtgcgtttggtttgg
gaacgcgaaataCGAACGctaactacccatgtctaaacttttcaatatat
ctccagaactaacagattctttgaaattctgtaaaaaggaccaagttcct
gaatagttttactatgttctgtgaaaaaatcataaccatcagtgaaatac
ttgttcatctatttaaaaccctattcggactagggggggctctttctgtt
cggaggtcaaactattggtaatagctcctgaaataatagagctttttcct
tgaaattttctataaattccgaacttttatttagcttcaaaataaaaaaa
aatttgacacctaaaaattttcacaccttgagtatgatgacatttctgac
agtaaggtgtcacaaaaattgacacttttccaatacaaatttatttttaa
tgtcaaatatatcgtttaaaccgtaatttattgaatatttaggataaaat
aagcattttaaactcagacaacttttttctaaagcttttgttagaataca
atagctatttataagaacaaaggaaattttgggtttttgctcactttggg
cataatgagtgacgtcatcaaaaaaattttttgtcaaaagttaccttact
tgacaaagatcttgtgtgccaaatttcatccaaaaagacccactagatca
aaagttttttaaggggtggtacaggaaagcccccccccctagttcttaac
cgcccctaaaagcctaggttcaATAGGGTTAAGatcgaagacaaaaattt
gcaaagaaaaataaaccttgagcataaaaaatgcttttttaaacactttt
ttccatcgaaaaacaaataacttttatagacttaccttccacaaacattg
aagaagcctctactaattaaagtaaatgagataagataagataaaacctt
aaaatcaaccagaactTACAACTTTTCATCcgaagcaaaagacgtgcttt
tctcgccccgtcttgttttagaatgagtaTTTCAATGAATTCTATTTGGT
TCCAGTtccccagtctttttttcatccaatcagatcgcgcgatttcactt
tcgctttctctagtccaataagactgcagGATTTGAgtctctattgaaaa
acccgcgccaagtaaaatagaaatacagggggtcacactattggctacag
gaactgaaagcaagcaattaaggccaatatttttggtttttctgaaggac
aaaaggtataggaagctttactgaaggagggataaggctggggctatcta
tttaaaagatatggaaaaAAAAAGCCACTtctttgggtgataattaagat
tttactaagaaactttaattctcttacccccatCTTGGCCCCctctgata
tgagcaagggaatcaatttggccacccctactgtaacttaattacttaaa
attaatttgttaaatctctttgacaacaaatttgttttgataactccacc
aagtttatcaatcatactttctgtcataacatgtcacaataaatttcact
gatagcgcgccctttttaacttttgttttcatttaaaatgaccggaCACC
GAATGGAGAATTAaagaacgcccgccgcctaaccgtCTACCGCCTGATGA
GATTAACAAATAGTGAGTGTTAACTTGGCGCGCGAGTGACCTCAAACGCT
CATATCGCGTGTGttttccactacggattttttttcatattttgatttaa
aagcctactcagtgcgaaagagaaatcatgtattttttaatacttggttc
attaaactcaaatccaatgactttggaggttcagtgaaatggcggtggaa
tggccgtcccatgttgtgTAAGATAGTCCCATGTTGATGAGAagttgcct
aaaatttgagccatagatgataaaatttgagccaagccaacattgaaaac
taatttgaagatcaagttcccaagaaaaagatctacggggaaGACGTAAC
CCATCTAGATGTGCGCACCGTCGGATATActatttcctggaaattttgcc
ggacctcaaacactgccccatttacatgtgcggaattactTTTACTTAgg
gtataaacaaggccttaaaaatcaaagcgctgtctctggaattgaatgac
aaaatttggttgtttGATATTCTGGCTGCTGCATGTTCGCGAACGATCAT
TTTGTctcttttttagttttcaaggtttaaTTATTGTCTTGggacttgaa
cttgattcaggtacctctcatccttgttgttacaaatacatcctgtagat
gactgcaatgttgttttttctgaaagcttgatttcctagtgtgactaact
gaattATAATTATGAtgttatcattaaaaaaattactgcTTGAGTAATTA
GTTAAATAGACTAATGTGTTCTCCAAAACGGCTATCAcagcgccatcatt
caaatcagaaagccaAGTATATTGCAGACTTTCTGACTATGGAAAAGCTG
TGAAATTTAAAATTGTTGCCCAATTTGTCAATGCTAAAGTTGCACTGCGA
CTCTATGAAAAAGACCTTTTGTGAGTCAGGATAcaattttaactcaaata
taTAATAAGTGTTGAAAgcctttcgcaccgagtaggcttttaaatcgaaa
tatgaaaaaaatccgtagtggaacacacgcaaatgtctggaacgaagaag
accaaattagtggcaaaaaaTGGAGCGTTTGACGCCATACTCGCGTgaca
agttacacactcgttactTGTTAATCCCATCGTGCGATAGGCggcaggcg
ttctctaattctccaattggcgtccgatcattttgaatgaaaacaaaaaa
gtttaaaagggcacactatcagtgaaagttatcgtgacagaaagtatgat
tgataaacttggtggagttatcgaaacaaatttgttgtcaaagagattta
acagtaaNacttggtggagttatcaaaacaaatttgttgtcaaagagatt
taacagtaagtgaaaatacaggccagatatcaacagtcccatgttttgac
caatcgtcccaagtaaGCTTCCAACTAAGCACATAGCACGCCAAGCAAAA
AATACACATACAAACATTAGGTTGTAAAATATATTTGTATAGCACACAAA
GTCATGCAGACTAGTACATATGttacttttgatagaaaataaaatttgaa
aaaatgtttttagaaatTGACTGTACTAGATTCCACGAAGCCTCTGAATG
ATTCTTAGAATGTTATATATAGAGTTTTTAAGTCCGGAAAAGTCTGGAAA
GTCTGGAATTAGCATACCTGTCTAGAAAAGTCTGGAATTGGCATACTTGT
CTggaaaaaaaaaagggaaaagatTTGGGCTCACTTTGCTCGTTCATTCT
GACATTTCtcattcttttgtatttatcaaTCTGGCCTTTCAAATGACCTT
TAAGGAATATCTGAAAACCTTTGTAACAGATAAAGTGTCTGGAAAATTTT
TGGTAATTCTATCAAAATGTCTGgaaagtttttgacatttccAGATAAAA
AACCTGGAAAAATAAGGCTTTTGAGACTAAGACTCTCTGTGTTATTAATT
TGGCCTAAAAAGCTATGTccttaattaaaaaatttaatattgtGTGTGct
taaaaatattgatttttgtaaaGCTGGAGTAGTAGTGTGAAAGGCAATTT
TCAAAGCACTGTGGGTCCAAAGGTGGATACTaagattttgtaaaagttgC
TTTATGCATTGATAATAAAATGGATATAATGGTGGGAATACAATAAATCT
TAATAAACCTCCTTTCCAGAGAAAATCTAATCCAATTGGTCAGTTGCTTG
GTTGAATTGGTAATTCAACTGCATGGATAGCGTAATCTCAATCCTGGCTG
GtttaaactgatttttttctaataATGTCTTTTTTAGGATCCTGGTGTTT
TCAAACCTGCAGATGAAGAAGTTTTAGCTCAAAGAACGTAAGCTTTTggt
cttgttttatttttgctttCTGCTCAATTTATAAAGCCATTTGCAGCATT
TTATGAAAAGTattagaaataaaaaagttaatattTTCCAATTTGATGTG
TTTGTAGTGACATTTTAAAATTACCTTTAACAAATCAATGATtaatatat
gaaatattttttctagaaTTCGAAAAGCTAAAAGAAGGGGACTGAGTTCT
GCTTCATCTGGTGAAGAAAAGGTATTCATTTTGAGCTATGAGCTATACTT
CTCGCTTTGaagattttatccaaatttGTGAGCAGTGAGATGCCTTTTGC
TAAATTGTTTGTTTTCTTACATTTCTTTAACTCTAGTTAAAAGCCCTGTC
TATTCCAATATTGAATCAAAATGATCATAAAGTGGGTCTCTGAAGTCAAT
GCATTCCCCTTGTTTGACGTCACTGAAATGACTTCTTTGATTGCGAACTT
TCATCCCACTTTTTGCTACTCTAATATTTAGAATATTCAGGGCAGAAAGT
CAGTTGACTAAACTACAGCTTATTCTCCAAAGAGTTACCTAGTGCTTCAT
GGAGCTTTATTTATTCTTTCTTTAGTCAAATCCATTTGCCAAGTTTGGAG
GCTTTGGTGGAGGAAACACAAGTACACCTACGTTAACCTTTGGTGCTGCT
AAGGTTATAACACCTGCAAAACCTGTTGCTCCTCTGGCTGCAATGAATAC
TAATAAAAGTACACAAAACAACTTTTGGGGAAACAAAACAGAGGaccaga
aaaaagattttttctcaaacagAAAACCAGCAAATGAAAAGCCGCTCAAT
GAATCGGCAACTTCAGACACTAATAACAACAGTGATAAAGAAAACGGCTC
TAATAAGAAAACAgacgaaaatttccaaaaagaactATGCCAATTAAATA
TGAGTGTTTTaagatttattcaaaaaaatcttgatGACAACCCGGTCATC
GATTTACAGCCTGTCTTCAATGACTACAAAAAACATATAGAAGTACTGAA
CGCTAAATACGAACTAGAGGCATCCAGCACAGAATCAGACGCGTCAACAA
AAACAGAATCTAAACCAGAACCAACACAAGCATCATTCAAAACACCGCTT
ACATCAAAAACACCTGAAAGTGCTCTTGCATCAGCACCAGCCGTATCATC
TGCTGCACCACCCTTTTCATTCAAATCGTCAACTCCAATACCAGCTAACC
CCTTTGGTGGTAGGTATTCATATTATGTTAGTCtacattttctttcattt
tgaaaataagactAGTAGACCATGCATTTTTGATGAAGAGACAATAATTA
ATTTTACGAAGGTAAAGTTTGAGAAAACCTGAGAAAACACCTATTACAAT
ACATACAATACAAGGTTGATGTAGAAAAAGTCAcatattttttcccattt
tcttcttcCAACCTACTTAGATGGTATGAATTTAAACCACAAGTTTTAGT
TCTAAGGACTGTAAAGAGTGTAGAAGGTCTTTGAATTGATAATACCTTAA
TacacaagctttttgatatttttagctACTTTaatcttattaatttttgc
aTGATTTAAATTTTGCGAGCTAAAATGTTGcaaaattttttggatttatt
tagGCGAATCAGCGTTTTCAAGTATCTTGTGTAGATTCGATTTTGAGAAC
CAGCAAGAGATCAGTTGCAAGTGGCACTGGAAACTCCAGTTGTTTTTTCA
CAAATAGAAGATTTGAGGGCTACTTTCATTCTTAAGAATTTTGAATCTCA
TGCGATTTTGTGAGTTTCGTAAATtcgtgaaaaaaacaaaaaacgctAAA
ACACAAAATTATACATGAAAATTAATCCTTTTGAAGTATATTTTAACTAC
AGTAAATCATTAGGCATCGAATGTTTATATGAATGTGTGAGCTCTTTTTC
TATAAGGGTTGAAGGGTGCATACAATTATTAAAGATTTCCCTTTCGTTTC
CATTTATgtagaattgaaaacaaactcAGTGTTCAATGCTGCAGCATCGC
CATTTTCATTCAAACCATCGGCCGCTTCATCTGCAACCACCACAGGAGGA
ACATCAACGAAAGTCCCTGAAACTGTTAAAGAAGAAAATGCTGACGATGA
AGATAAAGTGCCGGAACCAGAACGAAAAACGTTTGTTGCTCTTTTGTTTT
CACTCTATGGATACATTGTTTATAATCAATTGAATGAATAATTTGTTTtc
cattttcaaagaatttttttgatagaaggagggggtcaagcagttagtac
acgaCACTGCAAGGAACCATCATTTTTTGCAGTTAGTCACCTGAGTACTG
AGTGATTTCATCCAATTCGCACATCCAAGGCACATCACCACGGTACTAAC
TGgcatggtgtcttgtactaactacTTGACCCCCTTGATGACAGTACTTT
TGTTTGTCAGTTTgtatttaaacaaaattattaTAATCACTCTTTGAGTG
AAAGGAGGTAATCCTTCCTGGGACACTTTGTAATTATGTGCATGACGTGT
AAGTATCATACATCGTATAATCATCAATCACGCATATTAGGAACACATGA
TATTTCATCTGAATCATGAAGTCTAATTCAAGTCACATACTTTCCCCATT
ATGCTTACTATTATGCTTAATGGTGGTTAACAAGATAACctcgcatcaaa
ataaaaaagctgaaGTCCATATTCTGGAAAATTAAATATGACCATACCGA
TGCCTTAGACACCATTTTGTATCgattttttggctttaaatccatcaaaa
accaaactaatttcaaaagtttttaaaaaaataagaatttaacttttcat
tttattttctggGTAAAAAAGCCTCAAGTCACATCAGTTTGGGGCAAAAA
AGCCTTGAGACTAGAGTGGAAACAATTTTGGActtgaggcttttttaaca
caaaaatatttcaaatattaatGGTTTTTCAGGGTTTAAGGAAAAGTCAT
TTACAGTAAAgtcgattttctcaaaacaacaaaaatggacTTTTTTTATT
CTGATGCGACTTCTACTCTGGTTATCTTTGTCAAAAATGCTTTAGACCAT
CTTTGAAGAAGAATCTTTCTATACTCataatttctatattttttcattCT
AGGGTTGTTGAATCTGATGCGTTCCACACAACACGATGTAAACTATTCTT
CAAGAAAGGTGCAGAATGGAAAGAACTTGGTATCGGTATGTTATATCTGA
AACCTGGTTCTGACGACACCAAAGTACAACTCCTTGTCAGAATGGAGACA
AGTACTGGTAAAGTCCTCATAAATGTGACAGTGACCAATGATACGCCGAC
CTCTAGAAGTGGTAAAAATAACGTCATGGTTGTAACTATTCCCAATCCAC
CAGTATTTTCAAAACCAGAAGAAGGGGACAATGGTAAACCGTGTACTTAT
TTGATTCGAGTTAAAGGTACCACTGAAGCAGATGAGCTatttggaaaaat
caaaaaataaaatctatgcTGGGTGGCAATTTTTAAGCCAAAGTGAATTA
TGTTATCACTGATGGTGTCATGAAAGTCACTAAAATGACTCTGGGATCAG
CTCATGTTCAATGAAATAGTACAATGCAAATAATGCAATCCTTCATGGTC
GGCGGGTAATTTTGATTTGGATCGGAAAAATTGAGATGAAAGTTTTCATA
ACCCAGTATAATGATGTGCTAGAAATTAGGAGGGTTGTGGCTGACGGATA
GTATTTATTTTCCAATAGGGTAAAAATCATAGACATTGAATATTGATGAA
CAACTGGATATactttaaattaaatttgaatttaaaacccGTCTTGTCTG
ACCTGATTGCCAATAATGATATTTGCACTTAAAGAATACTACTTGTATTT
CCTATTGTAAActtaagatttttaaatttttagaaaaatccacAAAACTT
TCCTtcattctttgtgtttttgtttattaatgaatatattttttcttttt
attacatcATAGCTTTTTAAAATACAACTTTTATGTATTTCAAACGTAGC
CGctatttcttgattttgatcAATCTTGAAAAGGTCCCAATCTGCTGCAG
ATTACATCGAGACAGACTTGAGGATCCCCCTAGTCAACAACAAGACAAAA
GGTTATAATATTTCAACAATTGCCCTTAAGGTGGTTAACCCTTCAAAGAC
GCCACGACGCTTGTATAAGATATGGAGTATTTACCTAATTTCccatttga
attttaaattgca

Coding sequence (CDS) from alignment at scaffold_71:264343..276805+

>TCONS_00072110 ID=TCONS_00072110|Name=TCONS_00072110|organism=Clytia hemisphaerica|type=CDS|length=8100bp|location=Sequence derived from alignment at scaffold_71:264343..276805+ (Clytia hemisphaerica)
atggcgacgAAAAAGAAGCGTGCTGCTGACAATTATTTGACTCACGATAA
TTGGGATCAAGAAGATGACAGTGAAGAACCAGAGGATCCTGGTGTTTTCA
AACCTGCAGATGAAGAAGTTTTAGCTCAAAGAACaaTTCGAAAAGCTAAA
AGAAGGGGACTGAGTTCTGCTTCATCTGGTGAAGAAAAGTCAAATCCATT
TGCCAAGTTTGGAGGCTTTGGTGGAGGAAACACAAGTACACCTACGTTAA
CCTTTGGTGCTGCTAAGGTTATAACACCTGCAAAACCTGTTGCTCCTCTG
GCTGCAATGAATACTAATAAAAGTACACAAAACAACTTTTGGGGAAACAA
AACAGAGGaccagaaaaaagattttttctcaaacagAAAACCAGCAAATG
AAAAGCCGCTCAATGAATCGGCAACTTCAGACACTAATAACAACAGTGAT
AAAGAAAACGGCTCTAATAAGAAAACAgacgaaaatttccaaaaagaact
ATGCCAATTAAATATGAGTGTTTTaagatttattcaaaaaaatcttgatG
ACAACCCGGTCATCGATTTACAGCCTGTCTTCAATGACTACAAAAAACAT
ATAGAAGTACTGAACGCTAAATACGAACTAGAGGCATCCAGCACAGAATC
AGACGCGTCAACAAAAACAGAATCTAAACCAGAACCAACACAAGCATCAT
TCAAAACACCGCTTACATCAAAAACACCTGAAAGTGCTCTTGCATCAGCA
CCAGCCGTATCATCTGCTGCACCACCCTTTTCATTCAAATCGTCAACTCC
AATACCAGCTAACCCCTTTGGTGaattgaaaacaaactcAGTGTTCAATG
CTGCAGCATCGCCATTTTCATTCAAACCATCGGCCGCTTCATCTGCAACC
ACCACAGGAGGAACATCAACGAAAGTCCCTGAAACTGTTAAAGAAGAAAA
TGCTGACGATGAAGATAAAGTGCCGGAACCAGAACGAAAAACGGTTGTTG
AATCTGATGCGTTCCACACAACACGATGTAAACTATTCTTCAAGAAAGGT
GCAGAATGGAAAGAACTTGGTATCGGTATGTTATATCTGAAACCTGGTTC
TGACGACACCAAAGTACAACTCCTTGTCAGAATGGAGACAAGTACTGGTA
AAGTCCTCATAAATGTGACAGTGACCAATGATACGCCGACCTCTAGAAGT
GGTAAAAATAACGTCATGGTTGTAACTATTCCCAATCCACCAGTATTTTC
AAAACCAGAAGAAGGGGACAATGGTAAACCGTGTACTTATTTGATTCGAG
TTAAAGGTACCACTGAAGCAGATGAGCTatttggaaaaatcaaaaaataa
atggcgacgAAAAAGAAGCGTGCTGCTGACAATTATTTGACTCACGATAA
TTGGGATCAAGAAGATGACAGTGAAGAACCAGAGGATCCTGGTGTTTTCA
AACCTGCAGATGAAGAAGTTTTAGCTCAAAGAACaaTTCGAAAAGCTAAA
AGAAGGGGACTGAGTTCTGCTTCATCTGGTGAAGAAAAGTCAAATCCATT
TGCCAAGTTTGGAGGCTTTGGTGGAGGAAACACAAGTACACCTACGTTAA
CCTTTGGTGCTGCTAAGGTTATAACACCTGCAAAACCTGTTGCTCCTCTG
GCTGCAATGAATACTAATAAAAGTACACAAAACAACTTTTGGGGAAACAA
AACAGAGGaccagaaaaaagattttttctcaaacagAAAACCAGCAAATG
AAAAGCCGCTCAATGAATCGGCAACTTCAGACACTAATAACAACAGTGAT
AAAGAAAACGGCTCTAATAAGAAAACAgacgaaaatttccaaaaagaact
ATGCCAATTAAATATGAGTGTTTTaagatttattcaaaaaaatcttgatG
ACAACCCGGTCATCGATTTACAGCCTGTCTTCAATGACTACAAAAAACAT
ATAGAAGTACTGAACGCTAAATACGAACTAGAGGCATCCAGCACAGAATC
AGACGCGTCAACAAAAACAGAATCTAAACCAGAACCAACACAAGCATCAT
TCAAAACACCGCTTACATCAAAAACACCTGAAAGTGCTCTTGCATCAGCA
CCAGCCGTATCATCTGCTGCACCACCCTTTTCATTCAAATCGTCAACTCC
AATACCAGCTAACCCCTTTGGTGaattgaaaacaaactcAGTGTTCAATG
CTGCAGCATCGCCATTTTCATTCAAACCATCGGCCGCTTCATCTGCAACC
ACCACAGGAGGAACATCAACGAAAGTCCCTGAAACTGTTAAAGAAGAAAA
TGCTGACGATGAAGATAAAGTGCCGGAACCAGAACGAAAAACGGTTGTTG
AATCTGATGCGTTCCACACAACACGATGTAAACTATTCTTCAAGAAAGGT
GCAGAATGGAAAGAACTTGGTATCGGTATGTTATATCTGAAACCTGGTTC
TGACGACACCAAAGTACAACTCCTTGTCAGAATGGAGACAAGTACTGGTA
AAGTCCTCATAAATGTGACAGTGACCAATGATACGCCGACCTCTAGAAGT
GGTAAAAATAACGTCATGGTTGTAACTATTCCCAATCCACCAGTATTTTC
AAAACCAGAAGAAGGGGACAATGGTAAACCGTGTACTTATTTGATTCGAG
TTAAAGGTACCACTGAAGCAGATGAGCTatttggaaaaatcaaaaaataa
atggcgacgAAAAAGAAGCGTGCTGCTGACAATTATTTGACTCACGATAA
TTGGGATCAAGAAGATGACAGTGAAGAACCAGAGGATCCTGGTGTTTTCA
AACCTGCAGATGAAGAAGTTTTAGCTCAAAGAACaaTTCGAAAAGCTAAA
AGAAGGGGACTGAGTTCTGCTTCATCTGGTGAAGAAAAGTCAAATCCATT
TGCCAAGTTTGGAGGCTTTGGTGGAGGAAACACAAGTACACCTACGTTAA
CCTTTGGTGCTGCTAAGGTTATAACACCTGCAAAACCTGTTGCTCCTCTG
GCTGCAATGAATACTAATAAAAGTACACAAAACAACTTTTGGGGAAACAA
AACAGAGGaccagaaaaaagattttttctcaaacagAAAACCAGCAAATG
AAAAGCCGCTCAATGAATCGGCAACTTCAGACACTAATAACAACAGTGAT
AAAGAAAACGGCTCTAATAAGAAAACAgacgaaaatttccaaaaagaact
ATGCCAATTAAATATGAGTGTTTTaagatttattcaaaaaaatcttgatG
ACAACCCGGTCATCGATTTACAGCCTGTCTTCAATGACTACAAAAAACAT
ATAGAAGTACTGAACGCTAAATACGAACTAGAGGCATCCAGCACAGAATC
AGACGCGTCAACAAAAACAGAATCTAAACCAGAACCAACACAAGCATCAT
TCAAAACACCGCTTACATCAAAAACACCTGAAAGTGCTCTTGCATCAGCA
CCAGCCGTATCATCTGCTGCACCACCCTTTTCATTCAAATCGTCAACTCC
AATACCAGCTAACCCCTTTGGTGaattgaaaacaaactcAGTGTTCAATG
CTGCAGCATCGCCATTTTCATTCAAACCATCGGCCGCTTCATCTGCAACC
ACCACAGGAGGAACATCAACGAAAGTCCCTGAAACTGTTAAAGAAGAAAA
TGCTGACGATGAAGATAAAGTGCCGGAACCAGAACGAAAAACGGTTGTTG
AATCTGATGCGTTCCACACAACACGATGTAAACTATTCTTCAAGAAAGGT
GCAGAATGGAAAGAACTTGGTATCGGTATGTTATATCTGAAACCTGGTTC
TGACGACACCAAAGTACAACTCCTTGTCAGAATGGAGACAAGTACTGGTA
AAGTCCTCATAAATGTGACAGTGACCAATGATACGCCGACCTCTAGAAGT
GGTAAAAATAACGTCATGGTTGTAACTATTCCCAATCCACCAGTATTTTC
AAAACCAGAAGAAGGGGACAATGGTAAACCGTGTACTTATTTGATTCGAG
TTAAAGGTACCACTGAAGCAGATGAGCTatttggaaaaatcaaaaaataa
atggcgacgAAAAAGAAGCGTGCTGCTGACAATTATTTGACTCACGATAA
TTGGGATCAAGAAGATGACAGTGAAGAACCAGAGGATCCTGGTGTTTTCA
AACCTGCAGATGAAGAAGTTTTAGCTCAAAGAACaaTTCGAAAAGCTAAA
AGAAGGGGACTGAGTTCTGCTTCATCTGGTGAAGAAAAGTCAAATCCATT
TGCCAAGTTTGGAGGCTTTGGTGGAGGAAACACAAGTACACCTACGTTAA
CCTTTGGTGCTGCTAAGGTTATAACACCTGCAAAACCTGTTGCTCCTCTG
GCTGCAATGAATACTAATAAAAGTACACAAAACAACTTTTGGGGAAACAA
AACAGAGGaccagaaaaaagattttttctcaaacagAAAACCAGCAAATG
AAAAGCCGCTCAATGAATCGGCAACTTCAGACACTAATAACAACAGTGAT
AAAGAAAACGGCTCTAATAAGAAAACAgacgaaaatttccaaaaagaact
ATGCCAATTAAATATGAGTGTTTTaagatttattcaaaaaaatcttgatG
ACAACCCGGTCATCGATTTACAGCCTGTCTTCAATGACTACAAAAAACAT
ATAGAAGTACTGAACGCTAAATACGAACTAGAGGCATCCAGCACAGAATC
AGACGCGTCAACAAAAACAGAATCTAAACCAGAACCAACACAAGCATCAT
TCAAAACACCGCTTACATCAAAAACACCTGAAAGTGCTCTTGCATCAGCA
CCAGCCGTATCATCTGCTGCACCACCCTTTTCATTCAAATCGTCAACTCC
AATACCAGCTAACCCCTTTGGTGaattgaaaacaaactcAGTGTTCAATG
CTGCAGCATCGCCATTTTCATTCAAACCATCGGCCGCTTCATCTGCAACC
ACCACAGGAGGAACATCAACGAAAGTCCCTGAAACTGTTAAAGAAGAAAA
TGCTGACGATGAAGATAAAGTGCCGGAACCAGAACGAAAAACGGTTGTTG
AATCTGATGCGTTCCACACAACACGATGTAAACTATTCTTCAAGAAAGGT
GCAGAATGGAAAGAACTTGGTATCGGTATGTTATATCTGAAACCTGGTTC
TGACGACACCAAAGTACAACTCCTTGTCAGAATGGAGACAAGTACTGGTA
AAGTCCTCATAAATGTGACAGTGACCAATGATACGCCGACCTCTAGAAGT
GGTAAAAATAACGTCATGGTTGTAACTATTCCCAATCCACCAGTATTTTC
AAAACCAGAAGAAGGGGACAATGGTAAACCGTGTACTTATTTGATTCGAG
TTAAAGGTACCACTGAAGCAGATGAGCTatttggaaaaatcaaaaaataa
atggcgacgAAAAAGAAGCGTGCTGCTGACAATTATTTGACTCACGATAA
TTGGGATCAAGAAGATGACAGTGAAGAACCAGAGGATCCTGGTGTTTTCA
AACCTGCAGATGAAGAAGTTTTAGCTCAAAGAACaaTTCGAAAAGCTAAA
AGAAGGGGACTGAGTTCTGCTTCATCTGGTGAAGAAAAGTCAAATCCATT
TGCCAAGTTTGGAGGCTTTGGTGGAGGAAACACAAGTACACCTACGTTAA
CCTTTGGTGCTGCTAAGGTTATAACACCTGCAAAACCTGTTGCTCCTCTG
GCTGCAATGAATACTAATAAAAGTACACAAAACAACTTTTGGGGAAACAA
AACAGAGGaccagaaaaaagattttttctcaaacagAAAACCAGCAAATG
AAAAGCCGCTCAATGAATCGGCAACTTCAGACACTAATAACAACAGTGAT
AAAGAAAACGGCTCTAATAAGAAAACAgacgaaaatttccaaaaagaact
ATGCCAATTAAATATGAGTGTTTTaagatttattcaaaaaaatcttgatG
ACAACCCGGTCATCGATTTACAGCCTGTCTTCAATGACTACAAAAAACAT
ATAGAAGTACTGAACGCTAAATACGAACTAGAGGCATCCAGCACAGAATC
AGACGCGTCAACAAAAACAGAATCTAAACCAGAACCAACACAAGCATCAT
TCAAAACACCGCTTACATCAAAAACACCTGAAAGTGCTCTTGCATCAGCA
CCAGCCGTATCATCTGCTGCACCACCCTTTTCATTCAAATCGTCAACTCC
AATACCAGCTAACCCCTTTGGTGaattgaaaacaaactcAGTGTTCAATG
CTGCAGCATCGCCATTTTCATTCAAACCATCGGCCGCTTCATCTGCAACC
ACCACAGGAGGAACATCAACGAAAGTCCCTGAAACTGTTAAAGAAGAAAA
TGCTGACGATGAAGATAAAGTGCCGGAACCAGAACGAAAAACGGTTGTTG
AATCTGATGCGTTCCACACAACACGATGTAAACTATTCTTCAAGAAAGGT
GCAGAATGGAAAGAACTTGGTATCGGTATGTTATATCTGAAACCTGGTTC
TGACGACACCAAAGTACAACTCCTTGTCAGAATGGAGACAAGTACTGGTA
AAGTCCTCATAAATGTGACAGTGACCAATGATACGCCGACCTCTAGAAGT
GGTAAAAATAACGTCATGGTTGTAACTATTCCCAATCCACCAGTATTTTC
AAAACCAGAAGAAGGGGACAATGGTAAACCGTGTACTTATTTGATTCGAG
TTAAAGGTACCACTGAAGCAGATGAGCTatttggaaaaatcaaaaaataa
atggcgacgAAAAAGAAGCGTGCTGCTGACAATTATTTGACTCACGATAA
TTGGGATCAAGAAGATGACAGTGAAGAACCAGAGGATCCTGGTGTTTTCA
AACCTGCAGATGAAGAAGTTTTAGCTCAAAGAACaaTTCGAAAAGCTAAA
AGAAGGGGACTGAGTTCTGCTTCATCTGGTGAAGAAAAGTCAAATCCATT
TGCCAAGTTTGGAGGCTTTGGTGGAGGAAACACAAGTACACCTACGTTAA
CCTTTGGTGCTGCTAAGGTTATAACACCTGCAAAACCTGTTGCTCCTCTG
GCTGCAATGAATACTAATAAAAGTACACAAAACAACTTTTGGGGAAACAA
AACAGAGGaccagaaaaaagattttttctcaaacagAAAACCAGCAAATG
AAAAGCCGCTCAATGAATCGGCAACTTCAGACACTAATAACAACAGTGAT
AAAGAAAACGGCTCTAATAAGAAAACAgacgaaaatttccaaaaagaact
ATGCCAATTAAATATGAGTGTTTTaagatttattcaaaaaaatcttgatG
ACAACCCGGTCATCGATTTACAGCCTGTCTTCAATGACTACAAAAAACAT
ATAGAAGTACTGAACGCTAAATACGAACTAGAGGCATCCAGCACAGAATC
AGACGCGTCAACAAAAACAGAATCTAAACCAGAACCAACACAAGCATCAT
TCAAAACACCGCTTACATCAAAAACACCTGAAAGTGCTCTTGCATCAGCA
CCAGCCGTATCATCTGCTGCACCACCCTTTTCATTCAAATCGTCAACTCC
AATACCAGCTAACCCCTTTGGTGaattgaaaacaaactcAGTGTTCAATG
CTGCAGCATCGCCATTTTCATTCAAACCATCGGCCGCTTCATCTGCAACC
ACCACAGGAGGAACATCAACGAAAGTCCCTGAAACTGTTAAAGAAGAAAA
TGCTGACGATGAAGATAAAGTGCCGGAACCAGAACGAAAAACGGTTGTTG
AATCTGATGCGTTCCACACAACACGATGTAAACTATTCTTCAAGAAAGGT
GCAGAATGGAAAGAACTTGGTATCGGTATGTTATATCTGAAACCTGGTTC
TGACGACACCAAAGTACAACTCCTTGTCAGAATGGAGACAAGTACTGGTA
AAGTCCTCATAAATGTGACAGTGACCAATGATACGCCGACCTCTAGAAGT
GGTAAAAATAACGTCATGGTTGTAACTATTCCCAATCCACCAGTATTTTC
AAAACCAGAAGAAGGGGACAATGGTAAACCGTGTACTTATTTGATTCGAG
TTAAAGGTACCACTGAAGCAGATGAGCTatttggaaaaatcaaaaaataa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044786XLOC_044786Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072110-proteinTCONS_00072110-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072110-exon-scaffold_71-1491911889:264343..264503TCONS_00072110-exon-scaffold_71-1491911889:264343..264503Clytia hemisphaericaexon
TCONS_00072110-exon-scaffold_71-1510915933:264343..264503TCONS_00072110-exon-scaffold_71-1510915933:264343..264503Clytia hemisphaericaexon
TCONS_00072110-exon-scaffold_71-1575043694:264343..264503TCONS_00072110-exon-scaffold_71-1575043694:264343..264503Clytia hemisphaericaexon
TCONS_00072110-exon-scaffold_71-1491911889:272530..272579TCONS_00072110-exon-scaffold_71-1491911889:272530..272579Clytia hemisphaericaexon
TCONS_00072110-exon-scaffold_71-1510915933:272530..272579TCONS_00072110-exon-scaffold_71-1510915933:272530..272579Clytia hemisphaericaexon
TCONS_00072110-exon-scaffold_71-1575043694:272530..272579TCONS_00072110-exon-scaffold_71-1575043694:272530..272579Clytia hemisphaericaexon
TCONS_00072110-exon-scaffold_71-1491911889:272759..272813TCONS_00072110-exon-scaffold_71-1491911889:272759..272813Clytia hemisphaericaexon
TCONS_00072110-exon-scaffold_71-1510915933:272759..272813TCONS_00072110-exon-scaffold_71-1510915933:272759..272813Clytia hemisphaericaexon
TCONS_00072110-exon-scaffold_71-1575043694:272759..272813TCONS_00072110-exon-scaffold_71-1575043694:272759..272813Clytia hemisphaericaexon
TCONS_00072110-exon-scaffold_71-1491911889:273168..273801TCONS_00072110-exon-scaffold_71-1491911889:273168..273801Clytia hemisphaericaexon
TCONS_00072110-exon-scaffold_71-1510915933:273168..273801TCONS_00072110-exon-scaffold_71-1510915933:273168..273801Clytia hemisphaericaexon
TCONS_00072110-exon-scaffold_71-1575043694:273168..273801TCONS_00072110-exon-scaffold_71-1575043694:273168..273801Clytia hemisphaericaexon
TCONS_00072110-exon-scaffold_71-1491911889:274554..274722TCONS_00072110-exon-scaffold_71-1491911889:274554..274722Clytia hemisphaericaexon
TCONS_00072110-exon-scaffold_71-1510915933:274554..274722TCONS_00072110-exon-scaffold_71-1510915933:274554..274722Clytia hemisphaericaexon
TCONS_00072110-exon-scaffold_71-1575043694:274554..274722TCONS_00072110-exon-scaffold_71-1575043694:274554..274722Clytia hemisphaericaexon
TCONS_00072110-exon-scaffold_71-1491911889:275695..276805TCONS_00072110-exon-scaffold_71-1491911889:275695..276805Clytia hemisphaericaexon
TCONS_00072110-exon-scaffold_71-1510915933:275695..276805TCONS_00072110-exon-scaffold_71-1510915933:275695..276805Clytia hemisphaericaexon
TCONS_00072110-exon-scaffold_71-1575043694:275695..276805TCONS_00072110-exon-scaffold_71-1575043694:275695..276805Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_71supercontigscaffold_71:264343..276805 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
64.1155	60.7499	139.402	147.09	65.8306	52.73	49.1066	50.9776	38.9821	42.3298	28.5763	25.7498	18.8665	18.0266	25.1537	28.3319	41.0508	33.0733	6.04643	10.7321	21.5627	22.9705	45.9408	43.662	23.7706	25.2334	19.3749	12.143	26.6513	27.8658
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000156Ran_bind_dom
IPR011993PH_dom-like
IPR015007NUP2/50/61
Vocabulary: Biological Process
TermDefinition
GO:0046907intracellular transport
Vocabulary: Cellular Component
TermDefinition
GO:0005643nuclear pore
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046907 intracellular transport
cellular_component GO:0005643 nuclear pore
Blast
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BLAST of TCONS_00072110 vs. Swiss-Prot (Human)
Match: NUP50 (Nuclear pore complex protein Nup50 OS=Homo sapiens GN=NUP50 PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.334e-26
Identity = 61/132 (46.21%), Postives = 88/132 (66.67%), Query Frame = 3 
Query: 1020 EENADDEDKVPEPERKTVVE---SDAFHTTRCKLFFKKGAEWKELGIGMLYLKPGSDDTKVQLLVRMETSTGKVLINVTVTNDTPTSRSGKNNVMVVTIPNPPVFSKPEEGDNGKPCTYLIRVKGTTEADEL 1406
            E    DE++  EP +  V E    DAF++ +CKLF+KK  E+KE GIG L+LKP ++  K QLLVR +T+ G +L+NV +  + P +R+GKNNV++V +PNPP+    +E +   P T LIRVK + +ADEL
Sbjct:  332 ECKGGDEEENDEPPKVVVTEVKEEDAFYSKKCKLFYKKDNEFKEKGIGTLHLKPTANQ-KTQLLVRADTNLGNILLNVLIPPNMPCTRTGKNNVLIVCVPNPPI----DEKNATMPVTMLIRVKTSEDADEL 458
The following BLAST results are available for this feature:
BLAST of TCONS_00072110 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NUP501.334e-2646.21Nuclear pore complex protein Nup50 OS=Homo sapiens... [more]
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