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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00072020 ID=TCONS_00072020|Name=TCONS_00072020|organism=Clytia hemisphaerica|type=transcript|length=1058bp
NTGTTGAGAGCATTGGCGTCCATTTATGATCCGTTAGGACTGATAAACCC
TATCGTGTTAACGTTGAAATTGTATTTTCAGAAATTGTGTCTAAGTAAAA
TCGATTGGGACACGTCCATCGACGGTGATTTGCTTTGtgaatggcaaaat
ttggtgaaagacTTTGAGTATACACAAGAGATCAGAGTCGAAAGAGCTTA
TTCGAGTGTTAAACAAAATGTCAAGGAAATTCAGTTACATGGCTTCTCAG
ATGCCTGACTACGCACATGGTTGCTGTATCTACACACGAATCGTATCAAA
GGATGGTGATATCAAGACAAGCCTCATCACATCAAAGTCACACGTGAATC
CAATCAAGACGAAATCAAAAACCAAACCTGATGACCAGAAGTTGACGACA
CCCAGAATGGAGTTGGTAGCTATACTTATTGTATCACGTCTCATGAATGT
TGTTAAGTGACACTTAGAAAtgaactttgaatttgaaaaatttactgTAT
GGACTGACAGTAGTTTTGCTTACTGTTGGGTCAAGAACATTGAAACTTCG
AGAAAACAAGATAGATATATTAAGAATATTTCTGATGAGATTAGACGAAA
TCTTTAATCTCTCTTGATTGAACTGAAATTAGTTGCTACAAAGCAAAATC
CTTCGGACATTGCGTCCCGGGGGTCTAAGCCAGCACGTCTAGCTGGTTGT
AAATTATGGTTTTATGGTCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNAACCTCAAACCTTTTAGTGATGGTGTCAACAAGGGTCCTA
ATCTTCTAAATATACCTGAGGAGAAGGATACCCTTTCATTCAATATTAGT
GATGGGACTGAGTGGATAACTATACCTGAAGCTCAGTCCAACCTTGGTGA
AATTATTGACGTTCAAAGATTTCGGTCTTTTCAACAATTGCTACGTGTTA
CTTGGTATGTCTTCAAATTTGTGGAGAACATACGTtgttggaaaaataaa
aacaacaaacaaataaataagaaacaaataaacaaacagaATATTTTGAA
TGCTGATN Run BLAST on NCBI transcript from alignment at scaffold_68:96855..97912 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00072020 ID=TCONS_00072020|Name=TCONS_00072020|organism=Clytia hemisphaerica|type=transcript|length=1058bp|location=Sequence derived from alignment at scaffold_68:96855..97912 (Clytia hemisphaerica)
NATCAGCATTCAAAATATtctgtttgtttatttgtttcttatttatttgt
ttgttgtttttatttttccaacaACGTATGTTCTCCACAAATTTGAAGAC
ATACCAAGTAACACGTAGCAATTGTTGAAAAGACCGAAATCTTTGAACGT
CAATAATTTCACCAAGGTTGGACTGAGCTTCAGGTATAGTTATCCACTCA
GTCCCATCACTAATATTGAATGAAAGGGTATCCTTCTCCTCAGGTATATT
TAGAAGATTAGGACCCTTGTTGACACCATCACTAAAAGGTTTGAGGTTNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGACCATAAAAC
CATAATTTACAACCAGCTAGACGTGCTGGCTTAGACCCCCGGGACGCAAT
GTCCGAAGGATTTTGCTTTGTAGCAACTAATTTCAGTTCAATCAAGAGAG
ATTAAAGATTTCGTCTAATCTCATCAGAAATATTCTTAATATATCTATCT
TGTTTTCTCGAAGTTTCAATGTTCTTGACCCAACAGTAAGCAAAACTACT
GTCAGTCCATAcagtaaatttttcaaattcaaagttcaTTTCTAAGTGTC
ACTTAACAACATTCATGAGACGTGATACAATAAGTATAGCTACCAACTCC
ATTCTGGGTGTCGTCAACTTCTGGTCATCAGGTTTGGTTTTTGATTTCGT
CTTGATTGGATTCACGTGTGACTTTGATGTGATGAGGCTTGTCTTGATAT
CACCATCCTTTGATACGATTCGTGTGTAGATACAGCAACCATGTGCGTAG
TCAGGCATCTGAGAAGCCATGTAACTGAATTTCCTTGACATTTTGTTTAA
CACTCGAATAAGCTCTTTCGACTCTGATCTCTTGTGTATACTCAAAgtct
ttcaccaaattttgccattcaCAAAGCAAATCACCGTCGATGGACGTGTC
CCAATCGATTTTACTTAGACACAATTTCTGAAAATACAATTTCAACGTTA
ACACGATAGGGTTTATCAGTCCTAACGGATCATAAATGGACGCCAATGCT
CTCAACAN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00072020-exon-scaffold_68-1491911889:96855..97912 | TCONS_00072020-exon-scaffold_68-1491911889:96855..97912 | Clytia hemisphaerica | exon |
| TCONS_00072020-exon-scaffold_68-1510915933:96855..97912 | TCONS_00072020-exon-scaffold_68-1510915933:96855..97912 | Clytia hemisphaerica | exon |
| TCONS_00072020-exon-scaffold_68-1575043694:96855..97912 | TCONS_00072020-exon-scaffold_68-1575043694:96855..97912 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_68 | supercontig | scaffold_68:96855..97912 . |
Blast
The following BLAST results are available for this feature:
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