TCONS_00072012 (transcript) - C. hemisphaerica

Overview
NameTCONS_00072012
Unique NameTCONS_00072012
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length462

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00072012 ID=TCONS_00072012|Name=TCONS_00072012|organism=Clytia hemisphaerica|type=transcript|length=462bp
ATCGTGTAACCAAACCAGCTTATTTCACAATTTCTGGAGAAAATAAGGTA
GAACTCATGAAGGGATTTGGTGTTTATTTACACCGAGAGACCATATGCAA
TGCTCATTTACTACCTGAAACTGATACATGTGTGGCGTACTTGATGAAAA
GAATGTTTTCCCAGCAGGAACTGGTAATTTTGAATGTAACAGGTGCGAAT
GGTCATTCTCCAATATCAAAAAATGTTGTGAATGCAATACTAGggTTCTG
TTTGGCTTTCACCCACGAAGGTTGTGGAAGAAAGAAAGACAAACAGCAGT
CAAAACTAACCCTTCCTAAACTTCATAGGTACATCGCAGGTACCATTCAA
ACAGCCCGCAACTATTTGAAGGAAGGAAAGGATTGGAAAGTCAAATCTGA
AGAAGAGGAGTACACGCAGTAGTTTCTTATGCTCAACACCATTCAATTTT
CCGATCTCTTTT
Run BLAST on NCBI

protein sequence of TCONS_00072012-protein

>TCONS_00072012-protein ID=TCONS_00072012-protein|Name=TCONS_00072012-protein|organism=Clytia hemisphaerica|type=polypeptide|length=139bp
RVTKPAYFTISGENKVELMKGFGVYLHRETICNAHLLPETDTCVAYLMKR
MFSQQELVILNVTGANGHSPISKNVVNAILGFCLAFTHEGCGRKKDKQQS
KLTLPKLHRYIAGTIQTARNYLKEGKDWKVKSEEEEYTQ
Run BLAST on NCBI

transcript from alignment at scaffold_68:10497..23877-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00072012 ID=TCONS_00072012|Name=TCONS_00072012|organism=Clytia hemisphaerica|type=transcript|length=13381bp|location=Sequence derived from alignment at scaffold_68:10497..23877- (Clytia hemisphaerica)
ATCGTGTAACCAAACCAGCTTATTTCACAATTTCTGGAGAAAATAAGGTA AATTCTCACTGCATGAAATATACTTATATCGGACATCCGTTATACGGAAT TTTAAACGATAAGGTTAGATTTTCGTTCAATTTTCGGTGTCCGTTAAACT AAAGTTTTCGCATCCAGATAAGGGCTTCTAACGGATTGGTCCGATTTGAT ACATATCTGAATGTCCGATTATACAAACTATCCGAAAACCGTTAGTTTGA TATGTCAACTACCGGATCATTCGACAACGTACATTTTACACATTTACGGA ATACGCCAATTGGAATAGCTACCCTATCGGATTACACATTATCTGGGTGT TCCGTCGANACCGTTAGTTTGATATGTCAACTACCGGATCATTCGACAAC GTACATTTTACACATTTACGGAATACGCCAATTGGAATAGCTACCCTATC GGATTACATTATCTGGGTGTTCCGTCGATCGTATCACAAAAAAAGGATAG AAAATGGACACGTCATCTTGGCTTGAAACAGTAAGAATTACAGGATTTCG AGTTTATTTCCATTCTTTGCTTTTGCGTAATTTGCACGTTCAATTATAAC GTAAACAAATTCTGAATTGGTTAAAAACTGCACACATCAACACAAAACCG AATCAAAGTCTGTTTAAATGTGCAAATCATACNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNGACGTCATGTGGGGACCAGTCAAATGTGGTGAACCCATATCAG CATCACCTTTTGCGACCTTTAGGACCCAATTGATCATTTAAAAAAGTTAG TTTACTTCTAGCAAGTCTGTGCACACGAACAACATAGTAGCTCTCACTAT CTGTAACAGGGAAATTAAGTTGCAAATTTTTATCAAAGGAAATGGTTGAT TACAGGAAAATTAATTTTCACAGAATTTGTTTTTGCACTGCAAAAAACAC ACTATTTTTTTTTGCTTTTGGCAGAACTAATTTTCTTTGTTTGCACTTAC TAAAAAGCCAAGATTCCTTTATTTGGGATTTTTGGTATTTCCTAGAACAA AATTTGAATCAAACACCCAAAAACGTGAGAATTAGTTCCCTTAATTCAAT GAATAATTTATTCATTGAAGTAGTCAATGGCCTTTTGAATTTTCTCTGAC CATGCCGGCTCCTCACGATCAGAAACTGGACCCTCCTTACGAGCCAATGA TCTATACTTGGAATGTCCTGATAAGTTGTTCTGATGTAAAGTGTCAAGTT TTTCGAAACATCTGCTGATACCAGCTGACCGCCAGGTTAACCTCCTGTGA ACAAAACTTTTGCAACCACCATCTATTTCCTCATCTTCTGAAGACATCAG AGGTTCAATTAAAATGGCACGCATCGCTTCGCTGGTTGACTTATCGAAAT TCACCTTGCCAAACATTCTCAAACGTCTTTCAAGTTTCTGGAACGAAAAG TATTAAGAATGTGAGAATATTATCTAAGCTTAGTTTACTGAGCTTCTTCT TTTGAACTACACGCCACAGCTTTATTGTAATTATTGGCCAACTCAATCCA GCACTGATTTACTCTTATCCTAGTTACGTGTTATACTTAACCCAAATTTA GGTAACCTGAGATCAGATCGTGATCAGTTCTGAATCAATCAACAATGTTT GTTCTTGCTAGTAAATTTTTATACATTATACATTTATACCAAATGTTCTC ACCGTGGTCTTTCGTCCATTTTTTGCCATATCAGCATGGTAGTTTGGATT TTTCTCCACCTTCCGCTTAGTGTCTTTCTTTGACTGGAAATGGATCAAAA CAGCATCTGAAATAACAAATAAGATTGTTTTGTTGAAATCACCCCAATAT TTATGATGTCTGATAATGTTTATCTACTGGCCAAATTTATTTTCAATGCA GAGGAAATAAAATTCACTTAAAAAACACAAGTCTGTCTACTTTTGTCACA GCGCATAAATTTTGTGATTAAGACTATAATGCTTTAGAAACTTGGTTGAT TACAGGATGTTACATAGATCAAAGCAGAACTGCAAAAAAATTGGAATCTA AACATACTTTCAATATCAGTTTTGTCCATTTCAGGATGAAGCCCTCTCAC ATCTTCCACAACACGTTTTGATAAATGTTCGTTCGGACCAACAAATGCTC TAAAAACAGAAAATACAAACATTAAACACATTCCTTTTCTCAACGGGTGA TAGAGTTTGTTGATCTATCATTGTCTGTTGAGCTATTATACATTCAGGAA GTCAATTTTTGTAAGGAAAACACTATTATGCCAACTTACAAAACCTTCTA ATATCCAGTCCATGGAATGGGCTTACACCACCTGTAGGCTTGTAAGAAGA ATGTTCAAAAACATTTTTTCATCGACTTGAGTTTNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCTACAGACTATGAC TGTTCTCATTTTTACTACAAAGGGACATTGTATCAATTCTTTTGTCAAAT CTTACACAAACTCTGAAAGTCTACCTAGGATGTTGATCACAAGAATCTCA ACAAGTTTTGTACTACTTTAATCTAAGCTTTAGCTAAACTTCGAAATGAA ATTACCTCACAATCTTTTTCAGCACTTTCTTTGCGCTCTGTCAATAACTG CACACAGTTTTGATCTTATCTGGTTGGCAGTTTCAGCCATAAATCTTGGT ACTATGTCTCACCAGCAGTCGAGCAGCAAAGTGAGGGGTTAGACCCCTCA GCATTCCACGCAAAAAGTAGACTTTTTACTAATGATTTTCAGTAACTTTG GGAAATGAGGACCAAATTCCAAAATTGGGCTCTTCTAGAAAAAAATTGTT TATAGGAGGTGGAGGATATAACNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNTCCACTTAGTACCCAAAGACAACTCCACTTAATACCCAAAG ACAAGTCCACTTAGTACCCGAACTAGTCCACTTGATGCCCGAACAAGTCC ACTTGATGCCCGAACAAGTCCTCTTAGTACCCAAAGACAACTCCACTTGG TACCCAAAGACAACTCCACTTGGTACCCAAAGACAACTCCACTTGGTACC CAAAGACAAGTCCCTTTCGTACCCAAAGATAAGTCCACTTAATACCCGAA CTAGTCCACTTGATGCCCGAACAAGTCCTTTTCGTACCCAATGACAAGTC CACTTGATGCCCAAAGACAAGTTCACTCGGTACCCTAAGACAAGTCCACT TAGTACCCAAACTAGTCCACTTGATGCCCGAACAAGTTTTTTTCATAGCC CAAGACAAGTCCACTTGATACCCAACGACAAGACCTTTTCCTTAAAGAAG GAAAAATAGCCGAAGGGACTTAAATCAATGGACTTTTCTAGTACTAAAGG GTCAAAAGATATCCCCTGGCGATGTCACGTAGTGCCTTGCGGGGGTGATG TACTATTTATTATTTGTTTGTTTTGTTTGTAGTATTTGTTCGTACGTGCA TTGTGTCTTGACATTATAAAGAAAAAAAAAATATCCTCGACTGGGGATAT CCATGTATTGAAGCTCATTACAAATCACAAATCTTTATATTCCAAGTTTT GATATTTTGAAGCAGTCAATTGGGTCGAAAAATCAAATCAAAGAAGCAAC CTACCCGCTGACGATGGTGAAATTGACTTTCATCAATTTGAACCACGAAG TTCATGCCACCACCACCAAGATTGATCGGGTTCCTACCCAAGTCATTAGT ACAAACTAACCGTAATGCTTGCATCCTTTTTATAACATGCCTCTTGTCTA TATCGACCATGGTTGATACTTTGGTCATCGAAACCTTATGTGCCCACATG AAAATAATCATAAACAAATCGGCCAAGGTAACTGCAGTCCAAGGTTCAAA AATGGTCCCATTTCTAAGTCTTAAAGCTTTCCGACAATGGCGGTCACCAC ATCTCCTAAAATTAAGGATATATCTTACTTAAAACACAAAGGAATGATAT AATTGTTGGAGTTTTTTTGTCTGCAAGTTCCTTCCAATGCCCGGAGAGAA ATCTTCGATTTTTAGCCTTATCATTGAGTAGTTGGATATCCTTGAAAGGT TTATATACTAGGCGCAAACAGGATAAAGTTGATGTCTTTTTGTTCATTTG TTGACAAAATATGGTTGAAAAGTGGTTAATAATTGTCGTCAAATTTTGGC TTTTTTAAGCATAAAATCTCAGTGAAAAGACCGATTTCAAATTCTCTTTA TAATGGACCATGAAGCACAGCTACATTCTAATAATTTAGAATTAAAATTA CGATTACAATTTCAAAGTGGGCGTTGCAGGAGGGTCCCCGCCAAAATCAA ATATTTTGCTCACTCGCCAAAATACTTTAGGCGTACAAACTTTGGCGAGC AGAAAATTTCGCGAGGTCAAAGAATCGCGATGTTTACGACATAAACTTTT GCGAATTCAAGGTAAAAATACTTTTCGCGAGTATGAACTTTCATGAATCA AGACAGAAAAATGGAAATTTTCATACGAAAAGAATTCTTGAATTAGATTG AAACTTTTGGCTTAATGAGGCTTTAACAGGCTAAAAATCTTACATTTAAT TGTTAGTTTGAAGTTTTAAAGATATTCTATTTTGTTAGGAATTTTTGCAA ACTTAAGCTTTCGCGAATGGCCCTAGTAAGAATTTTCAAAGACATTAATA TTCGTGAAAAAGGCCAAAATTAGCGAAAATCGTCAAAGTTTTTGCTCGCG AAAGTTTTTGCGCCTAAAGTAAGTACTTAGAATAACCCCTAAGATTCATC AAAATTGCTCAAAATAAGGTAACATTAAAACATATTTAGCCGCCTCTCAT TTACCAAAAATAGTTCTCGCCGAAATTACAAGATTTGACCATTCACCAAA ATATTTTTTCAGGATTTTTGCTGCTCGCCAAAATTAATTTTCGCCAAAAT AAGTTTTGAAAATGTATTTACATGAAGAAAAGCCATGGTGTGTATTTCTA AAATCGGAACATGCATACTGAACAATGCACACTTACCATCTGTATCCATC ACAACACTGGTCTGTTCCTTCTAGATTCATCTGTCGACCACAATTGGGAC AAAGTTTATTCACACTAATTAATCTCTGCCCTTGCATAAAATGTACAATA GCTATTTTATCATTACCATATAATAAACCACCCCATCTTTGCATAAATCT TTGGCGAACTCGTCGTGCAGCCATCATCAATGAATGAAGATTATCAAAAA CTGAAAGGATTCTATTTGACCCCAAGCCAAAATATATTTATTTTGAACGC CGAGAAAGTAAAAATGCGCAAGGCGTTGTCTCGAAAAGTAACAAAATATG TAAAGAAGGAAAAAAATGCCAGACAGCGCATTTACGGTACTGCTTGAATA AATAATTTATCCATACTTTTCTTCGGGAATAATTTGGTTCAATGACAGAC TTCTTCAGTACGTATTTTCAACATGGAGTATGCAGACCTCGTTCAAATTG AGGATGAGCAGATTTTAATTTTTGAATTAATGCAGCGAGGTTTACTCTCG AGAAGAAAGTTATGCCGTAACCAAAGGAAGCATCAGAACCCACAGCAGAT GGAGCTTGAGGAAAATTCGAAACGCTGGTAAGGCTTCTACATTACAATTT TATAGCATTCGTTTTTGAATTTGGCCACCCAATAAAGTGAAATTATGGTC TTTGTTATTTCCTTTTTAAATTGTAATTTTCTTTGTATCTATGTGCTCCA CGGTAAAGTTCAGGGAAAAGTGTTTTGCTGACATCAACGACAAATGAAAA CTTTAGTTTCGGCTAAATCTTATGAACATAAGCCGGAATTTGCGCACGAA CGAGCTTTACCGTATTCAATTTTTGGGTATTCATTTTCGCGCGTGAAGTA TTTATTTTTCAAAAAATACACGTTTTTTTATAAGAACATCCAAAATTTTT GAAGCTTTCGAATGTTCTTAACTTTATGAGTTTTAAGCCTAAAAATGTTC TTAACGTGTTCTTATTTTTGTCATTATTTCAGTATTTTTGTCAATTTTCC TAAGAAATTGGGTGTTTTAGAGCCCTACGAAGCATAAAATGTTCTTAACT TGTTTTTAGCATTTTGNCTTATTTTTGTCATTTTTTGAGTATTTTTGTCA ATTTTCCTAAGAAATCGGGTGTTTTAGAGCCCTACGAAGCATAAAATGTT CCTAACTTGTTTTTAGCATTTTGGCCATCGAAGCCTTATGTTCTTATATA GTTTGTTCTTATAAAGAAAACGTGTAGCACTTATACGTACAAGTTATTAT GATTTTGGATAATTTTATGATTTTCCGGAGAGAGTCTGCGAAAATTCAGT ACTAATTTTTGCGCACCTTAACATAGCGCATAATTTCGGTATTAAATTTC ACGCATTTTCGGACCTCTACGCGAAAATTAGTACCTTTAAGGGAGACAAA AAGTTTTCTGTTACATCATGTTTTCATCCCTTTAAAACCTCTTTTTATTT ACTACTCAGTAGTTGTTTTTTACAACAAAAGTCACTTCAGAATCCGTTCG CACAAGCCAACCTTCTTTATAAAACTTTATGGCTTTAACGTACATCAGTT TCATGCTGGTGTAGGTAAAGCGCGTTTTCCTTAAATTTTGCAGGGTAGTT TTCAACATTTGTGAGCCTTGTACTTATCTTTCAAATTCAGGAGATGCAAA CAATGCACGAATACAATATCTGTTCTTTCCGATTCCTTCTTTCACCGATC CAAGACTTCCTTGACACAATGGATTTCGGTAATCGAGCTTTGACGTCAAC AACGCACTGTCCACGTAAGAAACGGTTCTCTTTAATTTTTAATTATAAAA ATTATTCACAACATCCTACGAACCGTTTTACTTTTTATAAGAAATTTTGG AAATCGAGGGTCTTTTGAACCTGTTCAGCACGAAAATGCTTTTGTAATAT ATAGGTAAATTTGACAAGGACAATAACAAAAGAAAACAACTCTTACAATT CCAAAAGTAATCTTGAAAAATTACCAAACTCGACTTTTGTCGACGATTTA CTCGCAAAACTTCCCGAGTCGTGTAGTAATTGCCCAATTATCTTTTTGTT TTATTGCTAGTGTCACCCGCGCGAGACTACTCGCAAAATGTCGACAGTTT CTATTGTTATTCAATTAGTATTTAGTATTATACTAGACGGTTCCCGTCGT CGCAAACGCCGGTTAAGTGTGTTGCTTACGCATGAAAAACTAAACGATTA TATATCGAAGTATCGAACGCGCCAACTATGGCTGTTAAAGATCTTTCGAG GCAGATGACTTTAAAAATTCGTCGGGGAAAACTTCATGTCACTCGCTGAA TTTGTATTGCGGGAAAGGTGTACTGTAGAGGTCGTTGTAAAAAACCCTCA AGACAATACCCAGCAGTTTTAAGATTGGCACCCTTCGTTTCATACATGAA CAAACGCCGAATGGGCTATTCCAGAAAAAAAACGTACACCCCCTGTTGAG GAGGTCCAACCTTTTGTATGAGCTACCCCTGGAATTCCAACTTAAAATAT TGTACCCCCTTGGAATTCCAAGAAACTTAAGGGTCAAAACCCTCTGGAAT TCCGAATTTTTGTGTGTTTTCAAACAATGCCCCATGGAATTCCGCTTATT TTTAATGAATTCTTGTAAACCCTTATGGAATTCCGCAATATTTCAAACCT TACCCCCTAGGAACGGAAATTGACCTCCTCAACAGGGGGTGTACGGTTTT TTTCTGAGAAAGCCCAATGCGTAATATTATGCGGCAAAAAAACTGGAACA TTTTCACTGGGATAATTTCTTAGATAAAATTGCCACGCCCATATATAAGA AGTTGAAATTTGTGACGTCAGAATTATTTTTTTTCTTTTGACGTCAAAAA TATCGTTTGAAAAGACAGAACAACGACTTCTTTTGGGGAGTGCTAAGATT TATTTGGACGGGGGTTTTTTCCGAAAGAAAAGCTGTTTTTAATTTTTTTT CCAATAAAAGAGAAAATTAAAGCATTTTAACAAATCATAACTGAGTTCAT ACTATCGTTTTTCTTAAAATTAACTTTTTCTACATTATATGNAATTTGGA CGGGGGTTTTTTCCGAAAAAGAAGCTGTTTTTCATTTTTTTCCAATAAAA GAGAAAATTAAAGCATTTTAACAAATCATAACTGAGTTCATACTATCGTT TTTCTTAAAATTAACTTTTTCTACATTATATGACTGGGTTTAAACCCTAG CTCTGACTCAAATGAACCCCCTGGAACCGCCTGAAAAAACACATGACTTC ACAGCTCCTCTGCCATTTTGCGTTACACACTTTTTTTCCAAAACTCAAAT AGTATATAAGACTAGACGGTTCCCGTCGTCGCAAACGCCGGTTTAGCTAG CGCATCAAAAGCCCTAGATAAAAGATGGTTTTCTTTATGTTCACGAAGGC GAATTCAAATTAGTTTCTTCAGGAAGTTTGAAGGTGATTTACAACCTCAA TTCAATCGAATTTGAGGTTTGCGCGACTCGTATATGCACTTTCGCACAAA AATTTTAAACCTGACGCGCCTTAATTGATTTCAAAACAATTAAGTATATC GCAACTTACAGGACTTATATGCACTTTTTAGGCGGAAGAACTCCGTTTTG TCATTTTTATCTACGTGAATTCGAAAATTTACGACATCACATATTTTGAA AAATTGACGTCCGAATTATTTTCGTTAGAAATTCACTGTAGGGGCTTCTT CACTTCGAATGCCAAATCTCTTTTTGGACGGGGGTTTTATCGGGAGATAG TGTTAATTTTTTCGCTCAATAATGGATGGAAAAAATTATAAACAAACAAT NTTTGCTGCTAGTTCTTTAGAAGAATTTGAAGAGTTTGAGAGATATTGGA ATAAAATCTATTTTTCAAAATTACAAACTTCTATTCAAAAAAACTTCTAA TGCAAATGGTTTAAAAGGAATATATCAAATTTTACAGGTAGAACTCATGA AGGGATTTGGTGTTTATTTACACCGAGAGACCATATGCAATGCTCATTTA CTACCTGAAACTGATACATGTGTGGCGTACTTGATGAAAAGGTATTCAGC TTGGCTTTGTGCATTAATTATTACTAGTAATCACAGATTTGCATTTTACA GAAAAAATTGAAAGGGCAAATCAGTTTATTTCAAGTTTTTTCACAAAATT AAATTTATATTGAAACTTTCTTGAAACTTTTGGAAATTAAATCAAAATTT CGTTGTTCTTAGAATGTTTTCCCAGCAGGAACTGGTAATTTTGAATGTAA CAGGTGCGAATGGTCATTCTCCAATATCAAAAAATGTTGTGAATGCAATA CTAGGTATGTAAATGCATGAAAAGAAGCTGTAAATTTACCTTAAGGGAAT TAATTCTACGAAATGCAATTTTTACCATTAATTCTCGAAAATTCCTTAAT AAAATGAAAGAATTTCGACAAAATTTGGTGTCAACGGCAAAAATTAGTCT CGCTATATACGTTGATTTTATATTTGCACCAATTTTTAACCAAGTTAACT TCCTTTAATACTTTCTCCCTTAACATAGTTTTGTGTATTCTTCACATTTG TTCTTATTTTAGGGTTCTGTTTGGCTTTCACCCACGAAGGTTGTGGAAGA AAGAAAGACAAACAGCAGTCAAAACTAACCCTTCCTAAACTTCATAGGTA CATCGCAGGTACCATTCAAACAGCCCGCAACTATTTGAAGGAAGGAAAGG ATTGGAAAGTCAAATCTGAAGAAGAGGAGTACACGCAGTAGTTTCTTATG CTCAACACCATTCAATTTTCCGATCTCTTTT

Coding sequence (CDS) from alignment at scaffold_68:10497..23877-

>TCONS_00072012 ID=TCONS_00072012|Name=TCONS_00072012|organism=Clytia hemisphaerica|type=CDS|length=1680bp|location=Sequence derived from alignment at scaffold_68:10497..23877- (Clytia hemisphaerica)
GGTTCTGTTTGGCTTTCACCCACGAAGGTTGTGGAAGAAAGAAAGACAAA
CAGCAGTCAAAACTAACCCTTCCTAAACTTCATAGGTACATCGCAGGTAC
CATTCAAACAGCCCGCAACTATTTGAAGGAAGGAAAGGATTGGAAAGTCA
AATCTGAAGAAGAGGAGTACACGCAGTAGAATGTTTTCCCAGCAGGAACT
GGTAATTTTGAATGTAACAGGTGCGAATGGTCATTCTCCAATATCAAAAA
ATGTTGTGAATGCAATACTAGGTAGAACTCATGAAGGGATTTGGTGTTTA
TTTACACCGAGAGACCATATGCAATGCTCATTTACTACCTGAAACTGATA
CATGTGTGGCGTACTTGATGAAAAGCGTGTAACCAAACCAGCTTATTTCA
CAATTTCTGGAGAAAATAAGGGTTCTGTTTGGCTTTCACCCACGAAGGTT
GTGGAAGAAAGAAAGACAAACAGCAGTCAAAACTAACCCTTCCTAAACTT
CATAGGTACATCGCAGGTACCATTCAAACAGCCCGCAACTATTTGAAGGA
AGGAAAGGATTGGAAAGTCAAATCTGAAGAAGAGGAGTACACGCAGTAGA
ATGTTTTCCCAGCAGGAACTGGTAATTTTGAATGTAACAGGTGCGAATGG
TCATTCTCCAATATCAAAAAATGTTGTGAATGCAATACTAGGTAGAACTC
ATGAAGGGATTTGGTGTTTATTTACACCGAGAGACCATATGCAATGCTCA
TTTACTACCTGAAACTGATACATGTGTGGCGTACTTGATGAAAAGCGTGT
AACCAAACCAGCTTATTTCACAATTTCTGGAGAAAATAAGGGTTCTGTTT
GGCTTTCACCCACGAAGGTTGTGGAAGAAAGAAAGACAAACAGCAGTCAA
AACTAACCCTTCCTAAACTTCATAGGTACATCGCAGGTACCATTCAAACA
GCCCGCAACTATTTGAAGGAAGGAAAGGATTGGAAAGTCAAATCTGAAGA
AGAGGAGTACACGCAGTAGAATGTTTTCCCAGCAGGAACTGGTAATTTTG
AATGTAACAGGTGCGAATGGTCATTCTCCAATATCAAAAAATGTTGTGAA
TGCAATACTAGGTAGAACTCATGAAGGGATTTGGTGTTTATTTACACCGA
GAGACCATATGCAATGCTCATTTACTACCTGAAACTGATACATGTGTGGC
GTACTTGATGAAAAGCGTGTAACCAAACCAGCTTATTTCACAATTTCTGG
AGAAAATAAGGGTTCTGTTTGGCTTTCACCCACGAAGGTTGTGGAAGAAA
GAAAGACAAACAGCAGTCAAAACTAACCCTTCCTAAACTTCATAGGTACA
TCGCAGGTACCATTCAAACAGCCCGCAACTATTTGAAGGAAGGAAAGGAT
TGGAAAGTCAAATCTGAAGAAGAGGAGTACACGCAGTAGAATGTTTTCCC
AGCAGGAACTGGTAATTTTGAATGTAACAGGTGCGAATGGTCATTCTCCA
ATATCAAAAAATGTTGTGAATGCAATACTAGGTAGAACTCATGAAGGGAT
TTGGTGTTTATTTACACCGAGAGACCATATGCAATGCTCATTTACTACCT
GAAACTGATACATGTGTGGCGTACTTGATGAAAAGCGTGTAACCAAACCA
GCTTATTTCACAATTTCTGGAGAAAATAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044712XLOC_044712Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072012-exon-scaffold_68-1575043694:23831..23877TCONS_00072012-exon-scaffold_68-1575043694:23831..23877Clytia hemisphaericaexon
TCONS_00072012-exon-scaffold_68-1575043694:11237..11340TCONS_00072012-exon-scaffold_68-1575043694:11237..11340Clytia hemisphaericaexon
TCONS_00072012-exon-scaffold_68-1575043694:10974..11065TCONS_00072012-exon-scaffold_68-1575043694:10974..11065Clytia hemisphaericaexon
TCONS_00072012-exon-scaffold_68-1575043694:10497..10715TCONS_00072012-exon-scaffold_68-1575043694:10497..10715Clytia hemisphaericaexon
TCONS_00072012-exon-scaffold_68-1510915933:23831..23877TCONS_00072012-exon-scaffold_68-1510915933:23831..23877Clytia hemisphaericaexon
TCONS_00072012-exon-scaffold_68-1510915933:11237..11340TCONS_00072012-exon-scaffold_68-1510915933:11237..11340Clytia hemisphaericaexon
TCONS_00072012-exon-scaffold_68-1510915933:10974..11065TCONS_00072012-exon-scaffold_68-1510915933:10974..11065Clytia hemisphaericaexon
TCONS_00072012-exon-scaffold_68-1510915933:10497..10715TCONS_00072012-exon-scaffold_68-1510915933:10497..10715Clytia hemisphaericaexon
TCONS_00072012-exon-scaffold_68-1491911889:23831..23877TCONS_00072012-exon-scaffold_68-1491911889:23831..23877Clytia hemisphaericaexon
TCONS_00072012-exon-scaffold_68-1491911889:11237..11340TCONS_00072012-exon-scaffold_68-1491911889:11237..11340Clytia hemisphaericaexon
TCONS_00072012-exon-scaffold_68-1491911889:10974..11065TCONS_00072012-exon-scaffold_68-1491911889:10974..11065Clytia hemisphaericaexon
TCONS_00072012-exon-scaffold_68-1491911889:10497..10715TCONS_00072012-exon-scaffold_68-1491911889:10497..10715Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00072012-proteinTCONS_00072012-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_68supercontigscaffold_68:10497..23877 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.317547 0.155335 0 0 0 0.168781 0.118168 0 0 0 0.0932614 0 0.0796262 0 0 0 0 0 0 0 0 0 0.150557 0.134368 0 0 0.155642 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00072012 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top