TCONS_00071954 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071954
Unique NameTCONS_00071954
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1743

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071954 ID=TCONS_00071954|Name=TCONS_00071954|organism=Clytia hemisphaerica|type=transcript|length=1743bp
AAGacattcaaacaaacaaaatttgagccaTGGATCATCTTGATGAATAT
TGCTGCGTTGCCTTCATGGAAGATGGCCAAAAGAAGATGGCCACTGTACC
ATCGAATTGGCTATTAAATAGCATGCTTTATTGGCCCAGAACGAATTGGT
CATCTATGATGAAAAGACGTGCTCCACCAAAAGACAGTTGGATCCAAGTG
CCGAACCCAACAGTTTTATTCACAGGAAGTCATCGAAGCTGTCTCGCTAT
TGACAGTGGGACCGAGGctgaaagtgaaggagaaaacaATATGACCAATG
TCACTTTTTCAGACGAGGAATCAGAATTATCCGGAGAAGATGGAGAAAAC
GAAGAAGATGATGTACCCGATTTCCCTCGCCAATACTCTTCACCTCAGAG
TGGGCTATCAATAAAACCaaccgaaacaaattttaaattaaCAACATCGA
GGAATACTGCTAGAAATATTACATCCAGTTTGGATATTGGGCAAGGAAAA
ACGACACAAGACCAATCGTTAGAATTAGTTACCCAATCTGCCCATACTTC
AGGACATGAACAATCTCCAGTCTTACCACACAATCTTCTAAACAAATCGG
CCAACAGTTTACGAAGCAAACTCAATTTACAAAGTACACCGCCACATTTT
CAAAAGTCACCGCATACCCCAAATAAATCACAACGAAATTCCCCGACTAT
CACATCGTCTGGTAAAACGAAATCGCCACACGTCCATAACAATAATTCAA
CATTTAATAGTGTTAAAAGAACGTCCTCAAGAAAAACTTGACAAACTCTA
TGAAAGGCAAACAAAAATCATGGACGCAATTGTTTTGCTGAAAAGTCACG
TCGATGAACGTTTTGGAGCTCTTCCACTTCAAGAgcaactttttgaaata
tcaaTGGTCACAACTCAAGAAGAAATGGTTGATCTTGAGCAAAATCTTGC
CGACCAAGAATACCTTGACAAATTTAAATCGCGCATTTCAAGAATTGGTG
GCGAAGACTTTGGTTCAGCAATCATCGAAATTATGGATAGATATTTCTCG
AAATCGTTCCTGAGCCTGTGCAATATGGAAGGTGCTAATGGCAAATTCGC
CTTTAAAAATTCCTTGGCATACAAAGCCATATCTGATGTGATCACCACCC
GATACTCCTCAACAACCGATCATGATGTGGCTAAGAAGGTGCAAAACAAG
TTACGGAATGCTCCAGCCCAAAAAGGTGGTCTCGGtcgcaaaaagaaaaa
ttgatttttaggattttcagtattttaaaaatttcgtcTCGCAAAATTCA
GAAAACAGCCTTCAGTTGCAACGGAGATCTTGGCATTTTACAGCGAATCT
TTTGTAACTCATGAATAAGCTCGAATAACCCTGAAAAGAACTTCTTTGAC
TCCAAAGAGAGTAACAGAAATTCCCAATAATTAATGAGTTTTCAATTTTC
TGACGTTGCTCTCGTTGATTCCTGATTATAGAAAGACCATGTTATGAcac
tctttcattgaatattttctttgtatttgagGTCTTCATTGATTAAGCCT
TCAGAGCAAGAATGATAGCACACTATTATGCTGGCTTAATCAAatctttg
ctttttcttttgcaAGAGTGCTTTTGTGAACATAAAGGATTTTCTGCTAA
ATTGTGAATATGAAATTGTAGATATGTATTTATTTTCCAGATTTCATTTG
TAAATAGAGATTAATTTATACTTAAATAACTCTTCATCAAGTA
Run BLAST on NCBI

protein sequence of TCONS_00071954-protein

>TCONS_00071954-protein ID=TCONS_00071954-protein|Name=TCONS_00071954-protein|organism=Clytia hemisphaerica|type=polypeptide|length=253bp
MDHLDEYCCVAFMEDGQKKMATVPSNWLLNSMLYWPRTNWSSMMKRRAPP
KDSWIQVPNPTVLFTGSHRSCLAIDSGTEAESEGENNMTNVTFSDEESEL
SGEDGENEEDDVPDFPRQYSSPQSGLSIKPTETNFKLTTSRNTARNITSS
LDIGQGKTTQDQSLELVTQSAHTSGHEQSPVLPHNLLNKSANSLRSKLNL
QSTPPHFQKSPHTPNKSQRNSPTITSSGKTKSPHVHNNNSTFNSVKRTSS
RKT
Run BLAST on NCBI

transcript from alignment at scaffold_65:189512..198619-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071954 ID=TCONS_00071954|Name=TCONS_00071954|organism=Clytia hemisphaerica|type=transcript|length=9108bp|location=Sequence derived from alignment at scaffold_65:189512..198619- (Clytia hemisphaerica)
AAGACATTCAAACAAACAAAATTTGAGGTAAATAACTTTTTTATTTCTCT
TTTCTTATGTCTGATTGACAGCTTTCATAAAAGTTAGCCTGGAGGCAGTT
TAAATATTTAGCCTTATTTTTTTTCGAGTTTTCGCTAAAGTGAAAGTAAA
AACAAAACGTTCGTTAGTTGGATAGTACAACGTATTAGAACTCTGAAGAT
AACTCTGGCTACATTTACATCTTTTATCTAACGCAATGGAAAGAAGTTGA
AGACATGCATATGGGTTGTATCTTTCCTTTTCACTTTCTATTTCATAAAC
ACATTCTATAAATGATGGGTGATGGGAATCATCTACCTTTCCCTTTTTCT
ATATATCCTAAGCAATTTTCTTCAAACACAATATGGATTTTTGATAGGCT
CAATTCTGATACTTTCCTTAAAACGTTCTAATTAATCCAAACCCCAATGA
CTTTCTAGCTTGTAAATTCAATTATAATTGTCCTTTAATTTCATACGTTT
TGTTTAAATCTGGCATCAAAACAATTTTAGAAAATATAAATTATTCGGTC
AGTCGGTATGGGAGATGTCAGTCAGTCGGTATGGGAGATGTTGGTCAGTC
GGTATGGGAGATGTCGGTCGGTCGGTCGGTCGGTTATGATATAAAATTCC
TAAAGAAAAAGCTCATATCAAACCGAGGAGATGTCGGTCAGTCGGTATGG
GAGATGTCGGTTGGTCGGTATGATGGGAGATGTCGGTGTCTGTATGGGGA
TGCCGGTTATGGTATGGGGGATGTCGTCTTCCATTGCGACAGTGGTTGGC
TCACAGGCTAGATAGCAGCCTTAAAATTGAATTTGTCGAATGGAGTTTCT
TGTCTACTTTGTCAAAGATTTTGTTGTATGAGTTTTAGCATTGATGTTTT
GCTGAGTTTTTCTAACTTTTCTTGTTGTTAAAAGGAGTTTTTGTCAATAT
TGTCAAACTTTTCTTCTTATCAGACTTTGTCAAACAGAGTTTTTTATCAA
GATATTGGCCAACTTTTGTTTTCAAAATTTAAATACATGTAAAGTCAAAC
TTAATCGAATACTCACAATTTTTAAAAGTTTTAAATATTTTTTGAAAAAA
GAATTATATCATATTATATGTTTAATTACAGTTTACTTAAAGCTCCATTT
TTCTTAAATTTCCGTAATTGAAGTTTACAAATTTTTTTTACAAGTTGATA
GGCTTTTAGGTATTATGCCTTTTTCTCAACAGGAGATACCGCGGAGATAT
AGTCATCCTAAAATCCATGCTTTTGGACTACTAACATGTCTTACTATGTA
CGAGCCTACATTATATTGTAAGATTGTAAGGGGATTTTAAGGGGGGTGAC
ACTGAAAAATTAAAGCATGCTTTAAGTACTAGGGTTTCCTCGGAGCCAAA
AAAAATTAAGGCAGAAGGCGGCAGTATAAAAGGGATGAGAATTAAATAGA
GCGTCTAATTAAAATTTTCGTAATGGGGGGAGAGAAAAAACTTTTTGTTC
ATTTTTTTCCATACTGCACGTGGGGAAAAATTCCAAATTCTTATATACAC
AACAAAACAATGGACCTATGTATTATAAAATCCTCACCACCAGCTATAAG
TAAAATTAAAGTGGGGTGGGAACTGCGCTATGATTTTTAAAGCAAGGGGT
GAAGAAATTCAATAGAAATAAATAAAACATGAAGCGGTCACATAAAATGT
TCTGCTTTAATCACTTGCTTCTACAGTATGACAACGAAATAAGCATGCTT
TAATTTCCCAGTTTGACCCCCCTAAAAATGATGTCAAGAAACAAAACATT
CTTTGTTTTGATTCTGTCCTCACTTACTTAAATGCATTCCTTTCTCAGAA
TAAAGTCAGAAATTATTCATTTTAGGATGACTAAAAATACTGGGTTGGTG
TCCAGCGCGGTATATCTGACCATAACTTTTTACAAGCTTGCTATTACTGA
TTACAAAAAGTCCATGCTATATTAAGAAAAATCTAGCGATAAGCGGTAAA
GTTAGTATTGTGGTCTAACATTTGGAAATGTAGGATTTTTTAGTAAATTT
AATGCTCTCATATAGTTTCAATATTTTTAAAAGATCTTTATAGAAAAAAG
GCTGCAATTTAGCGGACCCTTTGTTGATTTATTTACTAACTTACAAACTT
CTCCATGCAACGCAAAACTATGATTTTCTGCTGTTTCCTGTGCCTTTTTC
ACTTTGCTGGTATCCAGAAGCAAACTTCTTTCTCAATAATTCAAAAGGGG
TTTAAGTTCATTCAGGTTCATTTTGTATTTTTGAGAAAATTGCTATTGGA
ATCTCCTCTTAATTCTGAAAACATTCATGAAAATGGTTTAAGAGCCATTT
TCTGAGAAAAATAGGCAAAAATAGGCAAGGTCAGGAAGTGATATATCCTT
AGATTTCCCTCGCTTTTGGATATTTTGTTCAGAATAATGAAAAAAACATC
CCCTGAAATATTTTTTCAAAAAATTCCTTCCGGTTGCTGAGATGAGGGCC
ATCCATTGAATCTTTTTGGCTATTTTTGGGTCTGCAAAATGGAAGAGCTT
CCTATGATTCCTATGATTTCTAGACACCGAGGAATATTCAGAACCTCATT
TTTTATTTTTGTGTAGAATTCATCCCATATTACCAAGAAATGGAGAAATG
GGGACCTCTTTATGCTCAAAATGGGCTGAAAATCATTTCAAAACTTCCTC
AATTTGCCCGAATCTCTCAGAAAATGGCTCTTAAAGCTTTAATTTGCTGG
AAAGTAGATATTTGTCTACCTAACAGGTGTGACTTAGTAAATTTTGTGAA
GTGAACACAGGCCTTTTTTAACTGAACAAAAATTTGTAGGAAAGTTGAAT
GGTTACTTTTCTGCCTTTTCAATTTCAAAGTCTACCTACACCTAGATTTT
AGATAAAGAAAACATCAATAAGATAAAGGGCAATACTCAATTTTATTAGA
CTTAGGCCCTTGAACTGTAAAAAGTTGACTGACTTGCGATTTTCAGACCT
TCAGTATGATACATACATCAAAAGAAAGCCACCAGCAAGGCAGAGATTTA
TAAAAACCAAAAATTATAAATTTCAAAAAAAAGATTTACTTAAGCCCCTT
TTGAATTTAGGAGATATGGAGTTTTAAGTACCTATTGTTATTGAATCACT
AACCTATTGAAACTAATTTTGATGTTATGTAATATTTAAAGGTATTTGTA
TATATATGGAAGAATCAGAAAAAAGGAAAAAACGCAGAAAAGTGCAGAGG
TTGAGGGAAAAACTTTTTGGAGAAAAACAACCTAAAGTTCAAGTTGTTGA
GAGTGCTGCTGCTGACCTAAATACTTCACAAAATTTGAATAATATTTTTG
AACAGTCCGACTTTGGGAGCACATACCCTTCTTCAACAGATGAATCATTG
GATGCCTTAGATACTAGTCTCGAAGCTTTATCCTCTGACAATGACAACAA
TCTTACAGAAATCCTTTTTTGTGATGAGAATCAATTAGACGATAATTCAA
AGTTACAGAGTAATCTAAGAAATGTAGCAACAAAATATAGATTAAGTCGT
GGTTGTGTCAATGATCTACTGTCTGCGCTAATAGATTACGTTGTGGAAGT
TCCGAAAGATAGCAGAACACTACTAAAAATCATGAGTAAACTGTCTGCAG
AAGAGAAACTTTCAGCAAAAGTGAAAATTTTGAATAATTACAACTTTTTA
GAGTTTCCTCTGTTTCATATTTTGATACTAAAACTTCAGGAATTTGAGTT
TTTCTTTGGTATTACCACGAAGCAAAGCGTCGTATTATCTGAGATTTTCG
CACTGACCCCCTCTCTTGTTTTATTCATAGTTGGCGTAGTTTTGTCTAGT
TATTGTTCAAATATTTTAAAGATTCAATAAATTGTGAGGAATTTCTTTCT
TGAAACTTACTTTTGTCGTCTATGTGACAAGACTCTGTTAACATTAGGGA
AGATTTTTATTTTAGGAAAAGTTTAACAAGCAGTTAACAAGATGTTTTTC
CTAGCCCATATTTTTATTGAGTTATTACCTATCTATGCACTTAAATATTT
TTATTTTTCTTCGATATACTGTTCTCAAAAAGTTTCTTTTTGTCTCATTT
TTTTTTTTAATTTTCAGCCATGGATCATCTTGATGAATATTGCTGCGTTG
CCTTCATGGAAGATGGCCAAAAGAAGATGGCCACTGTACCATCGAATTGG
CTATTAAATAGCATGCTTTATTGGCCCAGAACGAATTGGTCATCTATGAT
GAAAAGACGTGCTCCACCAAAAGACAGTTGGATCCAAGTGCCGAACCCAA
CAGTTTTATTCACAGGTAATCCATTAAACTAATTTTGTACTTCGAACTTA
TGAATATCTGAATTGATTTCTTGAGCATTAATCTTGGAAGTTGCTTTTTA
TAATCGTTCTTGTAGCATCCTTTATAAATACCAGGAGTTTGGTTACATGC
AAGGAGTGATGATGAAAATAGGCTGATCCTGTTAATATTCTTAATATTCA
AATTTACCTGTCTCCTCATTTAAATATTTCTTCTTATAGGAAGTCATCGA
AGCTGTCTCGCTATTGACAGTGGGACCGAGGCTGAAAGTGAAGGAGAAAA
CAATATGACCAATGTCACTTTTTCAGACGAGGAATCAGAATTATCCGGAG
AAGATGGAGAAAACGAAGAAGATGATGTACCCGATTTCCCTCGCCAATAC
TCTTCACCTCAGAGTGGGCTATCAATAAAACCGTTAGTTGTACAGTGTTA
TCTTTTCGTAGCTTAAAAAAATTGCTTGACTTACCTAACTAACGAAAATG
GGAAATAATAGAAAAACAGCTTCTCTGATTGCTAGAGTTTTAGAATTGTT
TCTTTTTAAGAATTTTTTTCTTTAAGCTTTAATTAAATTTCCTGCTAAAT
AAAAAAACCACTATACCTCTTCTCTGCTTTATTTTATTTTTCAATCAAAA
AATTGAAAACGTAGTATCTTTTTATTTAGAACCGAAACAAATTTTAAATT
AACAACATCGAGGAATACTGCTAGAAATGAAAGGTAATAAAAAGTTTATT
TTTACTTGTTGTTATAAGTGTCATTCTAAAAAGGTGTACCAAGACTTTCT
GTTAATCTTAAAAAAGTTTCCATTCTATGTAAATTATTTATGAGAAATAC
CCTTGCATCATGATCAAATCAAAATTTTATATGAAAAAAAGCTTTTCAGT
CCTTCGAGAGTTCAAGATAGGGAGTATAAAATGCTGTTGTTTACTGGATT
AACCCAGAACGATTTACTTTACATATTACATCCAGTTTGGATATTGGGCA
AGGAAAAACGACACAAGACCAATCGTTAGAATTAGTTACCCAATCTGCCC
ATACTTCAGGACATGAACAATCTCCAGTCTTGTAAGAATCTACAAATTGA
CTTTCATTGGGTCTAAACGTTTGCTAACTATATGACCTGTCCACGTCTCA
ATCAGTTAATGAAATATTCTTACATTTCTTACATAAAGCCGGTTTTAGCT
TTGTATTGGTTTCAAAGACTCCCACACGAGCAGGGCATTCCAAATTAGCT
TTAGAGAAATTAAATGGGTCAGAAATTTCGGTCAAACAATCTAAGTAAAT
ATTTATTTTTATGCTCTTTTAGACCACACAATCTTCTAAACAAATCGGCC
AACAGTTTACGAAGCAAACTCAATTTACAAAGTACACCGCCACATTTTCA
AAAGTCACCGCATACCCCAAATAAATCACAACGAAATTCCCCGACTATCA
CATCGTCTGGTAAAACGAAATCGCCACACGTCCATAACAATAATTCAACA
TTTAATAGTGTTAAAAGAACGTCCTCAAGGTAAGATTTTCCAGAACAAAT
CAATTGTGATATTTTTCACTGAAAGTTGTAGCTCAGAGGGTATTCTCGTT
TTAACTGAATTAAACTGAGGCGATTCAGAGATGAATTAAGGAGACTTGAA
ATCATGTCTTTCAATATATCGATCAAGCATGACAGTTCTCTTCTATCTAG
TTTTTATCTTATTGTTGTTCTCTTATTCTTATTAGAAGAGACGCAGAGGA
GATCATGAGCGAGCAAGTCATCGACAATAGTAGTATAATGGGTCAGTTTA
TATGTCATAATTTTAGACAGAATTTAGAGAAGAGCTATATTCGTCGTTTT
ATTAGAATACTTAAGACTGTTTGTCTAAAGTTCTTTTAGATAAGTTACAC
CGGGTTGAACTTTATTTAGATGATAGTCTAACCTAAATTTTACTTGTATT
CGGATGATCAGTTCAAAAGCTATTGTCATTTAATCACCTATTTTTAATCT
TATTTTGTATTCTTCGAAAGGTGATTTTTTACACTGAATTTTAGCTACAC
CTTTTAAACCGATCGTTCTAATTTAAAAAGTAATACATTAAAATTTAAAC
CAGACCCCCTCTTCTATATTCAAGCAAAGTATGGCTCGCAGATTAGTTTG
ACAGGTCTGAAAAAACTGCCAAACATCCGTAGATTTTTTTTAAGCACCCA
GTACATGAAAAAGATTGAGAAAAAATCGACCGAATCATTTTTATTTTGTT
TGCTATTTTCCAGTATAGTTGAATAACCATTCCAATCATTTCATTTAGAA
AAACTTGACAAACTCTATGAAAGGCAAACAAAAATCATGGACGCAATTGT
TTTGCTGAAAAGTCACGTCGATGAACGTTTTGGAGCTCTTCCACTTCAAG
AGCAACTTTTTGAAATATCAATGGTCACAACTCAAGAAGAAATGGTTGAT
CTTGAGCAAAATCTTGCCGACCAAGAATACCTTGACAAATTTGTAAGAAA
TTATTGCTTTTACATTAAAGGGGCACTCTGCAGGAAAAATTTTTCCGAAA
TGTTTTTTATGCACTCAGGGATCACGAAGCAAACGGTTTTTTTTAGGATT
TACTTCTACTTNTTTTTTTAGAATTTACTTCTACTTTTTTCACAATCGTG
TTTCAAAAAATCTCTTATACTATACTCTGACTCTTTTTTCAAACAAACTT
TTTTTGCAGTGATAGTGCTACCTGGATGTTTTTCTTTTTAACCTCAAATC
AAGATTAGAAATTGTTAGTTACTGTTCATTTCATACACCCCTTTCTCACA
GACCCGGTGGGATTTTTTCAGGTGGTTGGGATAAAAATAACGGGCTGAAA
CTCAATAGGGATTGATATTTCTATATTTCTTATAGCTGGGGATTTCAGTT
CTTTTGTTTTCAAGTCAGATAATTCAGTGGGGATAAGAAAAATAGCATAT
TATTTTATAGTATTTTTCAGTGAGGATTGGCTTATTTGTTTATTTTCAGT
GGGGACAAAAATGGGAACAATTTTCCACCGGGACGATATTTTGGCCAATT
TTTCCGGTGGGAAGGAGTCCTAGTGGGTCTGTGAGAAGGGGGTGTATTTC
ATATATCTGAAAAGGAAAAATATATTAAAATTTCAATTTTCAGTGGAGTG
CCCCTTTAAACTTACATCTAAATCTTTGACACGGAATAATGTTCGTCTTT
TTGTTTAATAAGCATAACGCTTGTAAGTGTCCCTGGCTCTAGAGTTGGGT
TTTAAAACAATGGATGAATTCTAAAGTAAATGCTGGACCTCACCAATAGA
CAGACACTTAATGAAACAATTATTTTATTAGAAATCGCGCATTTCAAGAA
TTGGTGGCGAAGACTTTGGTTCAGCAATCATCGAAATTATGGATAGGTAA
AGACAATTTTTCTCTGCATTTTCCATGGTCTTTCAGTAAGTCGTGAGTCT
TAAAAATCCTTTACTGAATATGTAAACACTGCTTCAGTGTTATTATAAAT
TAATTAATACCATCGTAAAAATAGAAGAGTCGAGGGCGAGCGAAGTATAT
CATTAATAACCCTATACTAACTGTTTATGAAGGCAATACCATGTAATACT
ACACCTCTGCCTTAAAGCCAATATGAAGTTTCAAAGTATTGAAGTTCTAC
TAAAATATTTGCTCCTGATTCAAACAGAACGTCAAAAATTGCTTTTTGAT
TCAATTTTTCACCTCGTCATTTCAATATTTTATCTTTCATTTAGATATTT
CTCGAAATCGTTCCTGAGCCTGTGCAATATGGAAGGTGCTAATGGCAAAT
TCGCCTTTAAAAATTCCTTGGCATACAAAGCCATATCTGGTAAGTTATTC
ATGATATGATGAAATTCATGATATGCACCACTGCAATGTCTTCTGACATT
ACATCACGGAACCAATCTCTCATTGGTTGTAAGTGACGTAAAATCAGTCA
ATACGTCACTTTGAACCAATCAGCTATTAGGTGGAATGGAAGACATTGCA
ATGGTGCATATCATGAATAAATGTAAACCAGTAACATCTTTTTCATATTT
CAATTCGGTTAGTCGCAGTTCCACCCCTGTTCAAGATAGGATCTATTCAT
TCATGCTATTAACTATGTTAGTGATTTTGATCTTAGGGCTAGGACCTACT
AGATTCACCCTTCTTGAGTTTTAAAACAATTCTTCTGATTCTTTCTTCAG
ATGTGATCACCACCCGATACTCCTCAACAACCGATCATGATGTGGCTAAG
AAGGTGCAAAACAAGTTACGGAATGCTCCAGCCCAAAAAGGTGGTCTCGG
TCGCAAAAAGAAAAATTGATTTTTAGGATTTTCAGTATTTTAAAAATTTC
GTCTCGCAAAATTCAGAAAACAGCCTTCAGTTGCAACGGAGATCTTGGCA
TTTTACAGCGAATCTTTTGTAACTCATGAATAAGCTCGAATAACCCTGAA
AAGAACTTCTTTGACTCCAAAGAGAGTAACAGAAATTCCCAATAATTAAT
GAGTTTTCAATTTTCTGACGTTGCTCTCGTTGATTCCTGATTATAGAAAG
ACCATGTTATGACACTCTTTCATTGAATATTTTCTTTGTATTTGAGGTCT
TCATTGATTAAGCCTTCAGAGCAAGAATGATAGCACACTATTATGCTGGC
TTAATCAAATCTTTGCTTTTTCTTTTGCAAGAGTGCTTTTGTGAACATAA
AGGATTTTCTGCTAAATTGTGAATATGAAATTGTAGATATGTATTTATTT
TCCAGATTTCATTTGTAAATAGAGATTAATTTATACTTAAATAACTCTTC
ATCAAGTA

Coding sequence (CDS) from alignment at scaffold_65:189512..198619-

>TCONS_00071954 ID=TCONS_00071954|Name=TCONS_00071954|organism=Clytia hemisphaerica|type=CDS|length=4572bp|location=Sequence derived from alignment at scaffold_65:189512..198619- (Clytia hemisphaerica)
AAAAACTTGAACCACACAATCTTCTAAACAAATCGGCCAACAGTTTACGA
AGCAAACTCAATTTACAAAGTACACCGCCACATTTTCAAAAGTCACCGCA
TACCCCAAATAAATCACAACGAAATTCCCCGACTATCACATCGTCTGGTA
AAACGAAATCGCCACACGTCCATAACAATAATTCAACATTTAATAGTGTT
AAAAGAACGTCCTCAAGATATTACATCCAGTTTGGATATTGGGCAAGGAA
AAACGACACAAGACCAATCGTTAGAATTAGTTACCCAATCTGCCCATACT
TCAGGACATGAACAATCTCCAGTCTTAACCGAAACAAATTTTAAATTAAC
AACATCGAGGAATACTGCTAGAAGAAGTCATCGAAGCTGTCTCGCTATTG
ACAGTGGGACCGAGGCTGAAAGTGAAGGAGAAAACAATATGACCAATGTC
ACTTTTTCAGACGAGGAATCAGAATTATCCGGAGAAGATGGAGAAAACGA
AGAAGATGATGTACCCGATTTCCCTCGCCAATACTCTTCACCTCAGAGTG
GGCTATCAATAAAACCATGGATCATCTTGATGAATATTGCTGCGTTGCCT
TCATGGAAGATGGCCAAAAGAAGATGGCCACTGTACCATCGAATTGGCTA
TTAAATAGCATGCTTTATTGGCCCAGAACGAATTGGTCATCTATGATGAA
AAGACGTGCTCCACCAAAAGACAGTTGGATCCAAGTGCCGAACCCAACAG
TTTTATTCACAGAAAAACTTGAACCACACAATCTTCTAAACAAATCGGCC
AACAGTTTACGAAGCAAACTCAATTTACAAAGTACACCGCCACATTTTCA
AAAGTCACCGCATACCCCAAATAAATCACAACGAAATTCCCCGACTATCA
CATCGTCTGGTAAAACGAAATCGCCACACGTCCATAACAATAATTCAACA
TTTAATAGTGTTAAAAGAACGTCCTCAAGATATTACATCCAGTTTGGATA
TTGGGCAAGGAAAAACGACACAAGACCAATCGTTAGAATTAGTTACCCAA
TCTGCCCATACTTCAGGACATGAACAATCTCCAGTCTTAACCGAAACAAA
TTTTAAATTAACAACATCGAGGAATACTGCTAGAAGAAGTCATCGAAGCT
GTCTCGCTATTGACAGTGGGACCGAGGCTGAAAGTGAAGGAGAAAACAAT
ATGACCAATGTCACTTTTTCAGACGAGGAATCAGAATTATCCGGAGAAGA
TGGAGAAAACGAAGAAGATGATGTACCCGATTTCCCTCGCCAATACTCTT
CACCTCAGAGTGGGCTATCAATAAAACCATGGATCATCTTGATGAATATT
GCTGCGTTGCCTTCATGGAAGATGGCCAAAAGAAGATGGCCACTGTACCA
TCGAATTGGCTATTAAATAGCATGCTTTATTGGCCCAGAACGAATTGGTC
ATCTATGATGAAAAGACGTGCTCCACCAAAAGACAGTTGGATCCAAGTGC
CGAACCCAACAGTTTTATTCACAGAAAAACTTGAACCACACAATCTTCTA
AACAAATCGGCCAACAGTTTACGAAGCAAACTCAATTTACAAAGTACACC
GCCACATTTTCAAAAGTCACCGCATACCCCAAATAAATCACAACGAAATT
CCCCGACTATCACATCGTCTGGTAAAACGAAATCGCCACACGTCCATAAC
AATAATTCAACATTTAATAGTGTTAAAAGAACGTCCTCAAGATATTACAT
CCAGTTTGGATATTGGGCAAGGAAAAACGACACAAGACCAATCGTTAGAA
TTAGTTACCCAATCTGCCCATACTTCAGGACATGAACAATCTCCAGTCTT
AACCGAAACAAATTTTAAATTAACAACATCGAGGAATACTGCTAGAAGAA
GTCATCGAAGCTGTCTCGCTATTGACAGTGGGACCGAGGCTGAAAGTGAA
GGAGAAAACAATATGACCAATGTCACTTTTTCAGACGAGGAATCAGAATT
ATCCGGAGAAGATGGAGAAAACGAAGAAGATGATGTACCCGATTTCCCTC
GCCAATACTCTTCACCTCAGAGTGGGCTATCAATAAAACCATGGATCATC
TTGATGAATATTGCTGCGTTGCCTTCATGGAAGATGGCCAAAAGAAGATG
GCCACTGTACCATCGAATTGGCTATTAAATAGCATGCTTTATTGGCCCAG
AACGAATTGGTCATCTATGATGAAAAGACGTGCTCCACCAAAAGACAGTT
GGATCCAAGTGCCGAACCCAACAGTTTTATTCACAGAAAAACTTGAACCA
CACAATCTTCTAAACAAATCGGCCAACAGTTTACGAAGCAAACTCAATTT
ACAAAGTACACCGCCACATTTTCAAAAGTCACCGCATACCCCAAATAAAT
CACAACGAAATTCCCCGACTATCACATCGTCTGGTAAAACGAAATCGCCA
CACGTCCATAACAATAATTCAACATTTAATAGTGTTAAAAGAACGTCCTC
AAGATATTACATCCAGTTTGGATATTGGGCAAGGAAAAACGACACAAGAC
CAATCGTTAGAATTAGTTACCCAATCTGCCCATACTTCAGGACATGAACA
ATCTCCAGTCTTAACCGAAACAAATTTTAAATTAACAACATCGAGGAATA
CTGCTAGAAGAAGTCATCGAAGCTGTCTCGCTATTGACAGTGGGACCGAG
GCTGAAAGTGAAGGAGAAAACAATATGACCAATGTCACTTTTTCAGACGA
GGAATCAGAATTATCCGGAGAAGATGGAGAAAACGAAGAAGATGATGTAC
CCGATTTCCCTCGCCAATACTCTTCACCTCAGAGTGGGCTATCAATAAAA
CCATGGATCATCTTGATGAATATTGCTGCGTTGCCTTCATGGAAGATGGC
CAAAAGAAGATGGCCACTGTACCATCGAATTGGCTATTAAATAGCATGCT
TTATTGGCCCAGAACGAATTGGTCATCTATGATGAAAAGACGTGCTCCAC
CAAAAGACAGTTGGATCCAAGTGCCGAACCCAACAGTTTTATTCACAGAA
AAACTTGAACCACACAATCTTCTAAACAAATCGGCCAACAGTTTACGAAG
CAAACTCAATTTACAAAGTACACCGCCACATTTTCAAAAGTCACCGCATA
CCCCAAATAAATCACAACGAAATTCCCCGACTATCACATCGTCTGGTAAA
ACGAAATCGCCACACGTCCATAACAATAATTCAACATTTAATAGTGTTAA
AAGAACGTCCTCAAGATATTACATCCAGTTTGGATATTGGGCAAGGAAAA
ACGACACAAGACCAATCGTTAGAATTAGTTACCCAATCTGCCCATACTTC
AGGACATGAACAATCTCCAGTCTTAACCGAAACAAATTTTAAATTAACAA
CATCGAGGAATACTGCTAGAAGAAGTCATCGAAGCTGTCTCGCTATTGAC
AGTGGGACCGAGGCTGAAAGTGAAGGAGAAAACAATATGACCAATGTCAC
TTTTTCAGACGAGGAATCAGAATTATCCGGAGAAGATGGAGAAAACGAAG
AAGATGATGTACCCGATTTCCCTCGCCAATACTCTTCACCTCAGAGTGGG
CTATCAATAAAACCATGGATCATCTTGATGAATATTGCTGCGTTGCCTTC
ATGGAAGATGGCCAAAAGAAGATGGCCACTGTACCATCGAATTGGCTATT
AAATAGCATGCTTTATTGGCCCAGAACGAATTGGTCATCTATGATGAAAA
GACGTGCTCCACCAAAAGACAGTTGGATCCAAGTGCCGAACCCAACAGTT
TTATTCACAGAAAAACTTGAACCACACAATCTTCTAAACAAATCGGCCAA
CAGTTTACGAAGCAAACTCAATTTACAAAGTACACCGCCACATTTTCAAA
AGTCACCGCATACCCCAAATAAATCACAACGAAATTCCCCGACTATCACA
TCGTCTGGTAAAACGAAATCGCCACACGTCCATAACAATAATTCAACATT
TAATAGTGTTAAAAGAACGTCCTCAAGATATTACATCCAGTTTGGATATT
GGGCAAGGAAAAACGACACAAGACCAATCGTTAGAATTAGTTACCCAATC
TGCCCATACTTCAGGACATGAACAATCTCCAGTCTTAACCGAAACAAATT
TTAAATTAACAACATCGAGGAATACTGCTAGAAGAAGTCATCGAAGCTGT
CTCGCTATTGACAGTGGGACCGAGGCTGAAAGTGAAGGAGAAAACAATAT
GACCAATGTCACTTTTTCAGACGAGGAATCAGAATTATCCGGAGAAGATG
GAGAAAACGAAGAAGATGATGTACCCGATTTCCCTCGCCAATACTCTTCA
CCTCAGAGTGGGCTATCAATAAAACCATGGATCATCTTGATGAATATTGC
TGCGTTGCCTTCATGGAAGATGGCCAAAAGAAGATGGCCACTGTACCATC
GAATTGGCTATTAAATAGCATGCTTTATTGGCCCAGAACGAATTGGTCAT
CTATGATGAAAAGACGTGCTCCACCAAAAGACAGTTGGATCCAAGTGCCG
AACCCAACAGTTTTATTCACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044671XLOC_044671Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071954-proteinTCONS_00071954-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071954-exon-scaffold_65-1575043694:198593..198619TCONS_00071954-exon-scaffold_65-1575043694:198593..198619Clytia hemisphaericaexon
TCONS_00071954-exon-scaffold_65-1575043694:194305..194502TCONS_00071954-exon-scaffold_65-1575043694:194305..194502Clytia hemisphaericaexon
TCONS_00071954-exon-scaffold_65-1575043694:193888..194080TCONS_00071954-exon-scaffold_65-1575043694:193888..194080Clytia hemisphaericaexon
TCONS_00071954-exon-scaffold_65-1575043694:193594..193640TCONS_00071954-exon-scaffold_65-1575043694:193594..193640Clytia hemisphaericaexon
TCONS_00071954-exon-scaffold_65-1575043694:193239..193347TCONS_00071954-exon-scaffold_65-1575043694:193239..193347Clytia hemisphaericaexon
TCONS_00071954-exon-scaffold_65-1575043694:192791..192997TCONS_00071954-exon-scaffold_65-1575043694:192791..192997Clytia hemisphaericaexon
TCONS_00071954-exon-scaffold_65-1575043694:191828..192021TCONS_00071954-exon-scaffold_65-1575043694:191828..192021Clytia hemisphaericaexon
TCONS_00071954-exon-scaffold_65-1575043694:190924..190988TCONS_00071954-exon-scaffold_65-1575043694:190924..190988Clytia hemisphaericaexon
TCONS_00071954-exon-scaffold_65-1575043694:190481..190575TCONS_00071954-exon-scaffold_65-1575043694:190481..190575Clytia hemisphaericaexon
TCONS_00071954-exon-scaffold_65-1575043694:189512..190119TCONS_00071954-exon-scaffold_65-1575043694:189512..190119Clytia hemisphaericaexon
TCONS_00071954-exon-scaffold_65-1510915933:198593..198619TCONS_00071954-exon-scaffold_65-1510915933:198593..198619Clytia hemisphaericaexon
TCONS_00071954-exon-scaffold_65-1510915933:194305..194502TCONS_00071954-exon-scaffold_65-1510915933:194305..194502Clytia hemisphaericaexon
TCONS_00071954-exon-scaffold_65-1510915933:193888..194080TCONS_00071954-exon-scaffold_65-1510915933:193888..194080Clytia hemisphaericaexon
TCONS_00071954-exon-scaffold_65-1510915933:193594..193640TCONS_00071954-exon-scaffold_65-1510915933:193594..193640Clytia hemisphaericaexon
TCONS_00071954-exon-scaffold_65-1510915933:193239..193347TCONS_00071954-exon-scaffold_65-1510915933:193239..193347Clytia hemisphaericaexon
TCONS_00071954-exon-scaffold_65-1510915933:192791..192997TCONS_00071954-exon-scaffold_65-1510915933:192791..192997Clytia hemisphaericaexon
TCONS_00071954-exon-scaffold_65-1510915933:191828..192021TCONS_00071954-exon-scaffold_65-1510915933:191828..192021Clytia hemisphaericaexon
TCONS_00071954-exon-scaffold_65-1510915933:190924..190988TCONS_00071954-exon-scaffold_65-1510915933:190924..190988Clytia hemisphaericaexon
TCONS_00071954-exon-scaffold_65-1510915933:190481..190575TCONS_00071954-exon-scaffold_65-1510915933:190481..190575Clytia hemisphaericaexon
TCONS_00071954-exon-scaffold_65-1510915933:189512..190119TCONS_00071954-exon-scaffold_65-1510915933:189512..190119Clytia hemisphaericaexon
TCONS_00071954-exon-scaffold_65-1491911889:198593..198619TCONS_00071954-exon-scaffold_65-1491911889:198593..198619Clytia hemisphaericaexon
TCONS_00071954-exon-scaffold_65-1491911889:194305..194502TCONS_00071954-exon-scaffold_65-1491911889:194305..194502Clytia hemisphaericaexon
TCONS_00071954-exon-scaffold_65-1491911889:193888..194080TCONS_00071954-exon-scaffold_65-1491911889:193888..194080Clytia hemisphaericaexon
TCONS_00071954-exon-scaffold_65-1491911889:193594..193640TCONS_00071954-exon-scaffold_65-1491911889:193594..193640Clytia hemisphaericaexon
TCONS_00071954-exon-scaffold_65-1491911889:193239..193347TCONS_00071954-exon-scaffold_65-1491911889:193239..193347Clytia hemisphaericaexon
TCONS_00071954-exon-scaffold_65-1491911889:192791..192997TCONS_00071954-exon-scaffold_65-1491911889:192791..192997Clytia hemisphaericaexon
TCONS_00071954-exon-scaffold_65-1491911889:191828..192021TCONS_00071954-exon-scaffold_65-1491911889:191828..192021Clytia hemisphaericaexon
TCONS_00071954-exon-scaffold_65-1491911889:190924..190988TCONS_00071954-exon-scaffold_65-1491911889:190924..190988Clytia hemisphaericaexon
TCONS_00071954-exon-scaffold_65-1491911889:190481..190575TCONS_00071954-exon-scaffold_65-1491911889:190481..190575Clytia hemisphaericaexon
TCONS_00071954-exon-scaffold_65-1491911889:189512..190119TCONS_00071954-exon-scaffold_65-1491911889:189512..190119Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_65supercontigscaffold_65:189512..198619 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	2.96681e-10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1.5383e-07	0	0	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071954 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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