TCONS_00071935 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071935
Unique NameTCONS_00071935
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2338

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071935 ID=TCONS_00071935|Name=TCONS_00071935|organism=Clytia hemisphaerica|type=transcript|length=2338bp
TTATTGATTTAAATGACAACAATCCAGTATTCCAGATTTCAAGAGCAAGT
GTCAACGTATCAGAGGGAGCATTACGTTATTCTTCTATATACCAAATCTA
TGCCACTGATGCAGACTCTGGAATTAATGGTGAAATCTCTTACTCCTTCA
CTAAAGGAAATGATTTGAAAAGATTTGGAATTAACAACAAAGGAATGATC
TATTTGATAAATCCTTTAGATTACGAGTCTGTAAGGGTGTATCAACTGCA
TGTTATAGCTGAAGATAGAGGATCTCCAAGCCGGTCAAGTGAACTAATTA
TTGAAGTTTTGGTTCAAGATTTAAATGACCTTAGCCCTATTTTTACACAA
TCGGTGTACAACTATGTTCTTAGTCCAACACAGGCTCCATCCGACACACT
TTTTACAGTTTATGCATTCGATCACGATAGACGGGACAGATTCTTAAGAT
ACACCATTATCGGATCATTGGCAAACAAACACTTTCGGATTTCTTTTGGT
GGCTCAATCCAATTGATTCGAACTTTACCTCTGACTTTGCAACCTGAATT
TCAATTCTTGGTTCAAGCAACCGATTTTGGTTCCCCTGCTCCAAGAAGTG
GTTTCGCAGAAGTCATTATTACAAGTAAAGGAGCAATAAATGAATCTCAT
AAGTTCAACTTTGAACGATGTCCAAGAACATTGagaataaaagaaaattc
attggaaTTCTTGGAAGGTGATCCACAACTTTTACTGACAGATTCTTCAA
ACACCAATCATACATTTTCCATCACCAATAATGATGCCAATTTTAGGGTT
TCACCACAAGGGAACATTGTCATTGTCAATCAACTAGATTATGAAATCAA
GCAATTCCAAGAATTAGAAATCAAAGCTTCGAATAGCAAAGGATTTGAGG
CGAGATGTTTTGTtaatgtttttattgaagatGTGAACGACAACTCACCA
CGGGCAGTTGTTATTCCAGCTGTGGCTCGAATCACAACAAATTTCCCAAC
CAGATCATTAGTTGCATATCTTAGAATCCAGGATGAGGACAGTGTAAACC
TAGCTTTCACATATTCAATCGTCTCAGGTAATGATGCTGGTTTGTTTAGA
ATCGAAGATGGAAGTATTTTCACCACAAAGTGCATCAGTGACAAAGCGAT
AGGGTCTTATACTCTGAGCATCTCCGTTTACGACGGTGTATTTACGACAA
AACAATCCCTTTCTGTTGTGATCTACAAAGCTACCAATAAAAACTTTGAT
GGACATTGTGGGCTGGATTGCAATCCAATCACTTTCAGTTTGACCAGTAC
TGCAGATGGTGACGTCACTTTCACCAATGTTGAACAAAATGGCCGAATTC
TCAACAAAACAGAACTTCTAGAGATCATCCAGTCTCCAGAAAGCGTCAAC
TACATTGATCTTGAGGAAGGTATAGCAACATCTTTGATCGAATTTTTTGC
CGACAAGTATAATTTGGTTCGACTAAATATCACTGAATTATCTGTCGTTG
ATAATTACCGTCAAAAACGATCAACAGTCGCCGACCCTGGATTTTTGACG
GTCAAATACGTCTTTGAAGTCAGAACAACAGATGCTACGTTGAAAGAATT
GAATCCAAtccagaaaaatgaaacaattgaATTCACAAAATCTTCGAAGT
ACAGACTTCAAACCAATCAAGAATTGAGTGTTGTCTCAGATGTTGATGAA
TGTCAAACAAATTCAGATCAATGTGACGTAAATGCGTATTGTGTAGTTTT
TCCGAACACCATTTCTTATACTTGTCAATGTAAAGATAATTACGAAGGTG
ATGGGTTCACATGCGAAGAAAAAGTAGAACAAGAGAAAGAGAATGTCGCA
ACCATCATCGGTATTGGAGTTGCAGCTGTGGTTTTGTTGGTCATCATTGT
CGTGTTGGCTGCTGTGTTTTACAAGTCCAAAGTCCGATACATGCAAGACC
TGAAGAAAGCTAATGCTAATGCCAATGCAGGAATTCAAATGTTATCAAAA
GGAGATTGTGAGTAAGACGAGGATATCCGGAATCGATATATTTATTCCAT
GGGATTTGCACGCATGTTTACCAATAAGGTTTTCTTTGGTCTTGATTGTT
TTTCATTAGAACTGATTGTTTTTGAGTTTGGAATCAAAATTATCGGCAAA
TGAAGTAGCTTGAACGAAATGGACGAAATTCAGCTGATTGGTACTATGAA
GAGTTGAAATGAAACTGTATAAAGTgtaaattaaaataattaaatgttaT
GCTGCTATGTTTAAAAGTCCTCGTGTTTTTACTCAACTAAATTTGCTCCA
TCTAAGTTATGTCAAGTGATTTCTTTGCAAATTTATCA
Run BLAST on NCBI

transcript from alignment at scaffold_65:28348..32425-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071935 ID=TCONS_00071935|Name=TCONS_00071935|organism=Clytia hemisphaerica|type=transcript|length=4078bp|location=Sequence derived from alignment at scaffold_65:28348..32425- (Clytia hemisphaerica)
TTATTGATTTAAATGACAACAATCCAGTATTCCAGATTTCAAGAGCAAGT GTCAACGTATCAGAGGGAGCATTACGTTATTCTTCTATATACCAAATCTA TGCCACTGATGCAGACTCTGGAATTAATGGTGAAATCTCTTACTCCTTCA CTAAAGGAAATGATTTGAAAAGATTTGGAATTAACAACAAAGGAATGATC TATTTGATAAATCCTTTAGATTACGAGTCTGTAAGGGTGTATCAACTGCA TGTTATAGCTGAAGATAGAGGATCTCCAAGCCGGTCAAGTGAACTAATTA TTGAAGTTTTGGTTCAAGATTTAAATGACCTTAGCCCTATTTTTACACAA TCGGTGTACAACTATGTTCTTAGTCCAACACAGGCTCCATCCGACACACT TTTTACAGTTTATGCATTCGATCACGATAGACGGGACAGATTCTTAAGAT ACACCATTATCGGATCATTGGCAAACAAACACTTTCGGATTTCTTTTGGT GGCTCAATCCAATTGATTCGAACTTTACCTCTGACTTTGCAACCTGAATT TCAATTCTTGGTTCAAGCAACCGATTTTGGTTCCCCTGCTCCAAGAAGTG GTTTCGCAGAAGTCATTATTACAAGTAAAGGAGCAATAAATGAATCTCAT AAGTTCAACTTTGAACGATGTCCAAGAACATTGAGAATAAAAGAAAATTC ATTGGAATTCTTGGAAGGTGATCCACAACTTTTACTGACAGATTCTTCAA ACACCAATCATACATTTTCCATCACCAATAATGATGCCAATTTTAGGGTT TCACCACAAGGGAACATTGTCATTGTCAATCAACTAGATTATGAAATCAA GCAATTCCAAGAATTAGAAATCAAAGCTTCGAATAGCAAAGGATTTGAGG CGAGATGTTTTGTTAATGTTTTTATTGAAGATGTGAACGACAACTCACCA CGGGCAGTTGTTATTCCAGCTGTGGCTCGAATCACAACAAATTTCCCAAC CAGATCATTAGTTGCATATCTTAGAATCCAGGATGAGGACAGTGTAAACC TAGCTTTCACATATTCAATCGTCTCAGGTAATGATGCTGGTTTGTTTAGA ATCGAAGATGGAAGTATTTTCACCACAAAGTGCATCAGTGACAAAGCGAT AGGGTCTTATACTCTGAGCATCTCCGTTTACGACGGTGTATTTACGACAA AACAATCCCTTTCTGTTGTGATCTACAAAGCTACCAATAAAAACTTTGAT GGACATTGTGGGCTGGATTGCAATCCAATCACTTTCAGTTTGACCAGTAC TGCAGATGGTGACGTCACTTTCACCAATGTTGAACAAAATGGCCGAATTC TCAACAAAACAGAACTTCTAGAGATCATCCAGTCTCCAGAAAGCGTCAAC TACATTGATCTTGAGGAAGGTATAGCAACATCTTTGATCGAATTTTTTGC CGACAAGTATAATTTGGTTCGACTAAATATCACTGAATTATCTGTCGTTG ATAATTACCGTCAAAAACGATCAACAGTCGCCGACCCTGGATTTTTGACG GTCAAATACGTCTTTGAAGTCAGAACAACAGATGCTACGTTGAAAGAATT GAATCCAATCCAGAAAAATGAAACAATTGAATTCACAAAATCTTCGAAGT ACAGACTTCAAACCAATCAAGAATTGAGTGTTGTCTCAGGTAACTCAGTT GTTTTCATCTAAGAATCTCAAGACACGGTCATTTTCCTTTTGTATAAAAG TTGACTGAGACATCGCCAACTTCCATGTGGTTCCATTCTCCAAGCAAAAT ATTCTCGCTTGATCACTGAACCAGGAATGTCCCTCTTTTTTAAAGCTATC CGCATACATGTGTTTATTTGAAGATACGATATTAGTGAGGCTTGGGTAGG TGAGCAAAGACTGTCGTTATCTCACAGACCCACTGGGACCCCTTCCCACT GGAAAAATTGGCCAAAATATCGTCCCCGGTGGAACCAATCCTCGCTGCAA AATATCATACTATTTTTCTCATCTCCACTGAATTTTTTGACTTGAAAAAA AAAAGAATTGAAATCACCAGCCATAGAGAACATGGAAATATCAATCCCTA TCGTGTTGCAGTCTGTTATTCTTACCCCAACTGGCTGAAGAAATCATACT GGTTCTGTGAGAAGGGGATACATAAGATTGTGATGAATGTTGTCCGAACA CAGTTTTTGTCAAATTCAGGCCAATGGGTTTGGTATGATTGTCAAATACC TCTTTATAATGAATATGAAGAATTTTGAATTACTAAATTTACAATTCTTG ATTTCCATCTTAGATGTTGATGAATGTCAAACAAATTCAGATCAATGTGA CGTAAATGCGTATTGTGTAGTTTTTCCGAACACCATTTCTTATACTTGTC AATGTAAAGATAATTACGAAGGTGATGGGTTCACATGCGAAGAAAAAGGT ATTGTCATATTTTACTTGTAGCCTTTATCACCAATGTTACTTATACTTAA GTTTAAAGAGTTAAGACACGGTTTATCGTAAAAACAAACTATATCAGAAC ATCCCACCTTAAGGTTCCCAATATTTAAGAACGTAAATTTTTAAAGACTT TGTAGACTCCAAAATATACAATTTCTTAGAGAGTTGTACCGAATCAATTA AAGACAGTAAAAAATAATAAGAGCATTCTAAGAAGATTTATTTATGGAAA AATGTTTTAGAAATACATAAACTGCAATTGCCCCCCCTTCTGATTCCCAC AAGTTTACGAAGGTTATATCTAATATTCTAAACATCAATCCATAACAGTA GAACAAGAGAAAGAGAATGTCGCAACCATCATCGGTATTGGAGTTGCAGC TGTGGTTTTGTTGGTCATCATTGTCGTGTTGGCTGCTGTGTTTTACAAGT CCAAAGTCCGATACATGCAAGACCTGAAGAAAGCTAATGCTAATGCCAAT GCAGGGTAAGTAATGGCGGACAGATTTGCTAGAGTTCAGCCTTATAAAAT CAACTTTATTGGACCAAATAAGCATTTAAGCCCAAACCACCTTAACTTGA ACGTCNGTTCAGCCTTATAAAATCGACTTTATTGGACCAAATAAGCATTT AAGCCCAAACCACCTTAACTTGAACGTCATTCCCAGCTGGCACACAACGT TGTTTCAACGTTCATCTAACGTTATATGAACGTTGTGAACGTTAAATAAA CGTTGAAACAACGTTGTGTGGCAGCTGGGTTGTCATGTCAGCAATCGTTC GATTTATAAGAGAAAAGACACCCCTTTGTCACAAACCAGGCTACAACTCC ATTTCTATAGAAATATCATTCCCTTGAGAACGGACCGAGTCCGAAACATG TCGGGAAAAATCAAAATATAATAGCCGCATTCTTTTTCACCGTTCACCAT AATATCTATCCCCATTGGAATTTCGATAGGAATTTTTATCCCTATACTGA TGAAAGAAAGTTCCACCGGGGTTGTGAGACAGAGGTGTAACAAACAAACT ATATATTATCTCCAGGCACATTGGGCACAAAAAATTGCTCGTGTTATCAA GGTTCTAGTGATTAATAGTCAACTGTTCTATTGGGTTATACATTTAATGG GAAAATACGACCTTAGTTCATCTACTAACCCCGGGATATTTTAAGCTCGT AAGGGTTAAAGGATAGATCTTAACCTGTGATATGTGATGAATGGTACATC AAATCTCTTTTATTCCTTTAGAATTCAAATGTTATCAAAAGGAGATTGTG AGTAAGACGAGGATATCCGGAATCGATATATTTATTCCATGGGATTTGCA CGCATGTTTACCAATAAGGTTTTCTTTGGTCTTGATTGTTTTTCATTAGA ACTGATTGTTTTTGAGTTTGGAATCAAAATTATCGGCAAATGAAGTAGCT TGAACGAAATGGACGAAATTCAGCTGATTGGTACTATGAAGAGTTGAAAT GAAACTGTATAAAGTGTAAATTAAAATAATTAAATGTTATGCTGCTATGT TTAAAAGTCCTCGTGTTTTTACTCAACTAAATTTGCTCCATCTAAGTTAT GTCAAGTGATTTCTTTGCAAATTTATCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044664XLOC_044664Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071935-exon-scaffold_65-1575043694:30737..32425TCONS_00071935-exon-scaffold_65-1575043694:30737..32425Clytia hemisphaericaexon
TCONS_00071935-exon-scaffold_65-1575043694:29978..30112TCONS_00071935-exon-scaffold_65-1575043694:29978..30112Clytia hemisphaericaexon
TCONS_00071935-exon-scaffold_65-1575043694:29471..29627TCONS_00071935-exon-scaffold_65-1575043694:29471..29627Clytia hemisphaericaexon
TCONS_00071935-exon-scaffold_65-1575043694:28348..28704TCONS_00071935-exon-scaffold_65-1575043694:28348..28704Clytia hemisphaericaexon
TCONS_00071935-exon-scaffold_65-1510915933:30737..32425TCONS_00071935-exon-scaffold_65-1510915933:30737..32425Clytia hemisphaericaexon
TCONS_00071935-exon-scaffold_65-1510915933:29978..30112TCONS_00071935-exon-scaffold_65-1510915933:29978..30112Clytia hemisphaericaexon
TCONS_00071935-exon-scaffold_65-1510915933:29471..29627TCONS_00071935-exon-scaffold_65-1510915933:29471..29627Clytia hemisphaericaexon
TCONS_00071935-exon-scaffold_65-1510915933:28348..28704TCONS_00071935-exon-scaffold_65-1510915933:28348..28704Clytia hemisphaericaexon
TCONS_00071935-exon-scaffold_65-1491911889:30737..32425TCONS_00071935-exon-scaffold_65-1491911889:30737..32425Clytia hemisphaericaexon
TCONS_00071935-exon-scaffold_65-1491911889:29978..30112TCONS_00071935-exon-scaffold_65-1491911889:29978..30112Clytia hemisphaericaexon
TCONS_00071935-exon-scaffold_65-1491911889:29471..29627TCONS_00071935-exon-scaffold_65-1491911889:29471..29627Clytia hemisphaericaexon
TCONS_00071935-exon-scaffold_65-1491911889:28348..28704TCONS_00071935-exon-scaffold_65-1491911889:28348..28704Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_65supercontigscaffold_65:28348..32425 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0201883 0 0 0.0738371 0 0 0 0 0 0 0 0 1.95085 2.49919 0 0.0101546 0 0.0157323 4.85734 5.32331 0.113652 0.167816 0.0955333 0.0533567 0 0 0.0378282 0 0 0
Blast
BLAST of TCONS_00071935 vs. Swiss-Prot (Human)
Match: FAT1 (Protocadherin Fat 1 OS=Homo sapiens GN=FAT1 PE=1 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.918e-32
Identity = 128/429 (29.84%), Postives = 207/429 (48.25%), Query Frame = 3
Query:    3 IDLNDNNPVFQISRASVNVSEGALRYSSIYQIYATDADSGINGEISYSFTKGNDLKRFGINNK-GMIYLINPLDYESVRVYQLHVIAEDRGSPSRSSELIIEVLVQDLNDLSPIFTQSVYNYVLSPTQAPSDTLFTVYAFDHD-RRDRFLRYTIIGSLANKHFRI-SFGGSIQLIRTLPLTLQPEFQFLVQATDFGSPAPRSGFAEVIITSKGAINESHKFNFERCPRTLRIKEN---SLEFLEGDPQLLLTDSSNTNH------TFSITNNDANFRVSPQGNIVIVNQLDYEIKQFQELEIKASNSKGFEARCFVNVFIEDVNDNSPRAVVIPAVARITTNFPTRS--LVAYLRIQDEDSVNLAFTYSIVSGNDAGLFRIEDGSIFTTKCISDKA--IGSYTLSISVYDGVFTTKQSLSVVIYKATNK 1241
            +D+NDN PVF+       VSE  L  + + Q+YA   D   N EI+YS   GN+  +F I++K G +++I  LDYES   Y L V A D G+PS S    + V V D+ND +P+F+Q  Y  V+S       ++ TV A D D   +  + Y+II       F I    G +++ + L       +   VQA+D GSP PR     V I     +N++    F R   ++ I+EN       L    QL++TD  ++++      T    N++  F V+PQG ++  + +  + K    L++K +++   +      + I  + ++     ++P    IT++    S  ++  +   D+D V    TYS+    D  LF +   S    K I+ K   IG Y L++SV DG FTT   ++V I + T +
Sbjct: 3221 LDINDNPPVFEYREYGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDAVLEQSVITVMADDADGPSNSHIHYSIIDGNQGSSFTIDPVRGEVKVTKLLDRETISGYTLTVQASDNGSP-PRVNTTTVNIDVSD-VNDNAPV-FSRGNYSVIIQENKPVGFSVL----QLVVTDEDSSHNGPPFFFTIVTGNDEKAFEVNPQGVLLTSSAIKRKEKDHYLLQVKVADNGKPQLSSLTYIDIRVIEESIYPPAILPLEIFITSSGEEYSGGVIGKIHATDQD-VYDTLTYSLDPQMD-NLFSV---SSTGGKLIAHKKLDIGQYLLNVSVTDGKFTTVADITVHIRQVTQE 3637          

HSP 2 Score: 114.39 bits (285), Expect = 1.139e-25
Identity = 110/331 (33.23%), Postives = 166/331 (50.15%), Query Frame = 3
Query:    6 DLNDNNPVFQISRASVNVSEGALRYSSIYQIYATDADSGINGEISYSFTKGNDLK---RFGINNK-GMIYLINPLDYESVRVYQLHVIAEDRGSPSRSSELIIEVLVQDLNDLSPIFTQSVYNYVLSPTQAPSDTLFT-VYAFDHDRRD-RFLRYTIIGSLANKHFRI-SFGGSIQLIRTLPLTLQPEFQFLVQATD--FGSPAPRSGFAEVIITSKGAINESHKFNFERCPRTLRIKENS-LEFLEGDPQLLLTDSSNTNH-TFSITNNDAN--FRVSPQGNIVIVNQLDYEIKQFQELEIK--ASNSKGFEARCFVNVFIEDVNDNSPR 953
            D+NDN PVF     +V +SE ++  +S+ Q+ ATD+DS  N  ISY    GN  K    F +++  G+I L+  LDYE  R + + V A D G P+ SS++I+ V V DLND  P+F Q +Y   +S   AP     T V A+D D  D   L+Y+I+    +KHF I S  G I L       L+P +   +  +D  F S        +V +T  G     H   F +    + + EN+ L  L  + +    DS    H T+ I N+ A   F ++ +G I  + +LD E    + + ++  A ++ G  A C VNV + D NDN+P+
Sbjct: 2275 DINDNPPVFAQQSYAVTLSEASVIGTSVVQVRATDSDSEPNRGISYQMF-GNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQHTIFVRAVDGGMPTLSSDVIVTVDVTDLNDNPPLFEQQIYEARIS-EHAPHGHFVTCVKAYDADSSDIDKLQYSILSGNDHKHFVIDSATGIITLSNLHRHALKPFYSLNLSVSDGVFRSS------TQVHVTVIGG--NLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSGIYGHVTYHIVNDFAKDRFYINERGQIFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVNVILTDDNDNAPQ 2595          

HSP 3 Score: 109.383 bits (272), Expect = 4.441e-24
Identity = 120/410 (29.27%), Postives = 182/410 (44.39%), Query Frame = 3
Query:    3 IDLNDNNPVFQISRASVNVSEGALRYSSIYQIYATDADSGINGEISYSFTKGNDLKRFGIN-NKGMIYLINPLDYESVRVYQLHVIAEDRGSPSRSSELIIEVLVQDLNDLSPIFTQSVYNYVLSPTQAPSDTLFTVYAFDHDRR-DRFLRYTIIGSLANKHFRIS-FGGSIQLIRTLPLTLQPEFQFLVQATDFGSPAPRSGFAEVIITSKGAINESHKFNFERCPRTLRIKENSLEFLEGDPQLLLTDSS-----NTNHTFSIT--NNDANFRV-SPQGNIVIVNQLDYEIKQFQELEIKASN--SKGFEARCFVNVFIEDVNDNSPRAVVIPAVARITTNFPTRSLVAYLRIQDEDSV-NLAFTYSIVSGNDAGLFRIED--GSIFTTKCISDKAIGSYTLSISVYD 1184
            +D NDN+PV + +  S  + E  L    I QI ATDAD   N EI+Y+   G+  ++F +N + G +    PLD E   VY L V A D G   R  +  I + ++D+ND +P F+   Y   +     P   L  V A D D   +R + Y++I S A+  F I+   G IQL + L   LQ  +   ++A D G P   +    VI++     +    F +     T+     S + L G   L +  +S     N   T+SI   N    F + S  G + I+  LDYE      L ++A++  +        VNV + D+NDN+P          I+ +      V  +   D D   N    YSI+ GN    F I+   G +  TK +  + I  YTL++   D
Sbjct: 3014 LDANDNSPVCEKTLYSDTIPEDVLPGKLIMQISATDADIRSNAEITYTLL-GSGAEKFKLNPDTGELKTSTPLDREEQAVYHLLVRATDGG--GRFCQASIVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDADAGLNRKILYSLIDS-ADGQFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRRLTATGTVIVSVLDINDNPPVFEYREYGATV-----SEDILVGTEVLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDAVLEQSVITVMADDADGPSNSHIHYSIIDGNQGSSFTIDPVRGEVKVTKLLDRETISGYTLTVQASD 3414          

HSP 4 Score: 107.071 bits (266), Expect = 2.070e-23
Identity = 119/421 (28.27%), Postives = 183/421 (43.47%), Query Frame = 3
Query:    3 IDLNDNNPVFQISRASVNVSEGALRYSSIYQIYATDADSGINGEISYSFTKGND---LKRFGINNK-GMIYLINPLDYESVRVYQLHVIAEDRGSPSRSSELIIEVLVQDLNDLSPIFTQSVYNYVLSPTQAPSDTLFTVYAFDHDR-RDRFLRYTI-IGSLANKHFRISFGGSIQLIRTLPLTLQPEFQFLVQATDFGSPAPRSGFAEVIITSKGAINESHKFNFERCPRTLRIKENSLEFLE----GDPQLLLTDSSNTNHTFSITNNDAN--FRVSPQ-GNIVIVNQLDYEIKQFQELEIKASNSKGFEARCFVNVFIEDVNDNSP------------RAVVIPAVARITTNFPTRSLVAYLRIQDEDSVNLAFTYSIVSGNDAGLFRIED--GSIFTTKCISDKAIGSYTLSISVYD 1184
            ID ND+ P F  S+  V + E     + I QI A D D     ++ Y+     D   LK+F ++   G +Y    LD+E+V  + L V+  D+  P + +   I V V D ND +P FT S Y   +  + A    +  V A D D+ ++  + Y+I  G++ N        GSI+  + L  + Q E+  +V+ATD GSP P S    V I    A N S KF           KE S+E  E    G    ++T  S ++  + I + +    F ++P  G I+    LD+E      L I+ +N  G      V V ++D NDN+P             +  I +V     N P   LV      D+DS N    Y IV  +    F I+   G+I T   +  +    +  ++ V+D
Sbjct: 1447 IDTNDHRPQFSTSKYEVVIPEDTAPETEILQISAVDQDE--KNKLIYTLQSSRDPLSLKKFRLDPATGSLYTSEKLDHEAVHQHTLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSIESGNIGNSFMIDPVLGSIKTAKELDRSNQAEYDLMVKATDKGSP-PMSEITSVRIFVTIADNASPKFTS---------KEYSVELSETVSIGSFVGMVTAHSQSSVVYEIKDGNTGDAFDINPHSGTIITQKALDFETLPIYTLIIQGTNMAGLSTNTTVLVHLQDENDNAPVFMQAEYTGLISESASINSVVLTDRNVP---LVIRAADADKDS-NALLVYHIVEPSVHTYFAIDSSTGAIHTVLSLDYEETSIFHFTVQVHD 1851          

HSP 5 Score: 104.76 bits (260), Expect = 9.159e-23
Identity = 112/411 (27.25%), Postives = 183/411 (44.53%), Query Frame = 3
Query:    6 DLNDNNPVFQISRASVNVSEGALRYSSIYQIYATDADSGINGEISYSFTKGND---LKRFGINNK-GMIYLINPLDYESVRVYQLHVIAEDRGSPSR-SSELIIEVLVQDLNDLSPIFTQSVYNYVLSPTQAPSDTLFTVYAFDHDRRD--RFLRYTIIGSLANKHFRI-SFGGSIQLIRTLPLTLQPEFQFLVQATDFGSPAPRSGFAEVIITSKGAINESHKFNFERCPRTLRIKENSLEFLEGD--PQLLLTDS---SNTNHTFSITNNDA-NFRVSPQ-GNIVIVNQLDYEIKQFQELEIKASNSKGFEARCFVNVFIEDVNDNSPRAVVIPAVARITTNFPTRSLVAYLRIQDEDS-VNLAFTYSIVSGNDAGLFRIED--GSIFTTKCISDKAIGSYTLSISVYD 1184
            D NDN+PVF+ S     + E     S + QI A+DADSG NG++ YS  +      ++ F IN + G I  +  LD+E    YQ+ V+A D G   + SS  I++V V D+ND  P FT  +Y   +S        +  +   D D  +  R + Y I G      F + +     ++    PL  +    +L+  T     A    F+   I     ++ +   N   C +TL       + L G    Q+  TD+   SN   T+++  + A  F+++P  G +     LD E +    L ++A++  G   +  + + +EDVNDN+P     P    +  N    +L+  ++  D D+ +N    YS++   D G F I +  G I   K +  +    YTLS+   D
Sbjct: 2801 DANDNSPVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKVVASDHGEKIQLSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSEDDPQGGVIAILSTTDADSEEINRQVTYFITGGDPLGQFAVETIQNEWKVYVKKPLDREKRDNYLLTIT-----ATDGTFSSKAIVEVKVLDAND--NSPVCEKTLYSDTIPEDVLPGKLIMQISATDADIRSNAEITYTLLGSGAEKFKLNPDTGELKTSTPLDREEQAVYHLLVRATDGGGRFCQASIVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDADAGLNRKILYSLIDSAD-GQFSINELSGIIQLEKPLDRELQAVYTLSLKAVD 3203          

HSP 6 Score: 93.5893 bits (231), Expect = 2.555e-19
Identity = 112/436 (25.69%), Postives = 184/436 (42.20%), Query Frame = 3
Query:    3 IDLNDNNPVFQISRASVNVSEGALRYSSIYQIYATDADSGINGEISYSFTKGNDLKRFGINN-KGMIYLINPLDYESVRVYQLHVIAED--RGSPSRSSELIIEVLVQDLNDLSPIFTQSVYNYVLSPTQAPSDTLFTVYAFDHD-RRDRFLRYTIIGSLANKHFRISFGGSIQLIRTLPLTLQPEFQFLVQATDFGSPAPRSGFAEVIITSKGAINESHKFNFERCPRTLRIKENSLEFLEGDP--QLLLTDSSNTNHT-------FSITNND--ANFRVSPQ-GNIVIVNQLDYEIKQFQELEIKASNSKGFEARCFVNVFI--EDVNDNSPRAVVIPAVARITTNFPTRSLVAYLRIQDED-SVNLAFTYSIVSGNDAGLFRI--EDGSIFTT-KCISDKAIGSYTLSISVYDGVFTTKQSLSVVIYKATNKN 1244
            +D NDN P F      V VSE    +S I Q+ ATD D G NG ++YS     D   F I++  G++ +  PLD E    + L + A D  R  P   S ++++V ++D+ND  P F    Y   +         +  + A D D  +   +RY+++             G++++++ L    +  +   V+A D G P   S    V +         H   F        +KE++       P   L++T S++           +SI +      F++  + G I   ++LD E      L + A++        F+ ++I  EDVNDN+P+         I  N P    V  +   D D S N    Y I SGN  G F I  + G I TT + +  +    + L ++V D     K +++ VI K  ++N
Sbjct:  813 VDANDNPPEFLQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSIV--TDTDTFSIDSVTGVVNIARPLDRELQHEHSLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTFIPPNYRVKVREDLPEGTVIMWLEAHDPDLGQSGQVRYSLLDHGEGNFDVDKLSGAVRIVQQLDFEKKQVYNLTVRAKDKGKPVSLSSTCYVEVEVVDVNENLHPPVFSSFVEKGTVKEDA-------PVGSLVMTVSAHDEDARRDGEIRYSIRDGSGVGVFKIGEETGVIETSDRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDEN 1239          

HSP 7 Score: 93.5893 bits (231), Expect = 2.689e-19
Identity = 116/406 (28.57%), Postives = 191/406 (47.04%), Query Frame = 3
Query:   51 VNVSEGALRYSSIYQIYATDADSGINGEISYSFTKGNDLKRFGINNK-GMIYLINPLDYESVRVYQLHVIAEDRGSPSRSSELIIEVLVQDLNDLSPIFTQSVYNYVLSPTQAPSDTLFTVYAFDHD-RRDRFLRYTIIGSLANKHFRI-SFGGSIQLIRTLPLTLQPEFQFLVQATDFGSPAPRSGFAEVIITSKGAINESHKFNFERCPRTLRIKENSLE-----FLEG-DPQLLLTDSSNTNHTFSITNNDANFRVSP-QGNIVIVNQLDYEIKQFQELEIKASNSKG----FEARCFVNVFIEDVNDNSPRAVVIPAVARITT--NFPTRSLVAYLRIQDEDS-VNLAFTYSIVSGNDAGLFRI--EDGSIFTTKCISDKAIGSYTLSISVYDGVFTTKQSL 1211
            + V E     SS+  + +TD D+G NG++ Y+ + GN+   F I+ + GM+ +++PLD E+   Y L++   D G P +++  ++ V+V D ND  P F Q  Y   +S  +     +  V A D D   +  + Y+I+       F I S  G + + R L   LQ E    ++A D     P+     V+  S   +N++    F      ++++E+  E     +LE  DP   L  S    ++  + + + NF V    G + IV QLD+E KQ   L ++A + KG      + C+V V + DVN+N    V    V + T   + P  SLV  +   DED+  +    YSI  G+  G+F+I  E G I T+  +  ++   Y L+      VF T Q +
Sbjct:  724 IQVKENQPVGSSVIFMNSTDLDTGFNGKLVYAVSGGNEDSCFMIDMETGMLKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSEDKEVHSEIIQVEATDKDLGPNGHVTYSIVTD--TDTFSIDSVTGVVNIARPLDRELQHEHSLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPP-TFIPPNYRVKVREDLPEGTVIMWLEAHDPD--LGQSGQVRYSL-LDHGEGNFDVDKLSGAVRIVQQLDFEKKQVYNLTVRAKD-KGKPVSLSSTCYVEVEVVDVNENLHPPVFSSFVEKGTVKEDAPVGSLVMTVSAHDEDARRDGEIRYSIRDGSGVGVFKIGEETGVIETSDRLDRESTSHYWLT------VFATDQGV 1116          

HSP 8 Score: 84.7297 bits (208), Expect = 1.617e-16
Identity = 114/431 (26.45%), Postives = 184/431 (42.69%), Query Frame = 3
Query:    3 IDLNDNNPVFQISRASVNVSEGALRYSSIYQIYATDADSGINGEISYSFTKGNDLKRFGIN-NKGMIYLINPLDYESVRVYQLHVIAEDR-----GSPSRSSELIIEVLVQDLNDLSPIFTQSVYNYVLSPTQA---PSDTLFTVYAFDHDRRDRFLRYTIIGSLANKHFRI--SFGGS----IQLIRTLPLTLQP-EFQFLVQATDFGSPAPRSGFAEVIITSKGAINESHKFNFERCPRTLRIKENSLEFLEGDPQLLLTDS----SNTNHTFSITNNDANFRVS-PQGNIVIVNQLDYEIKQFQELEIKASNSKGFEARCFVNVFIEDVNDNSPRAVVIPAVARITTNFPTRSLVAYLRIQDED-SVNLAFTYSIVSGNDAGLFRIED--GSIFTTKCISDKAIGS-YTLSISVYDGVFTTKQSLSVV 1220
            +D ND  P+F  +  SV++ E     +SI ++ ATDAD G NGE  YSF    D+  F I+   G+I L   LDY   ++Y++ ++A DR     GS   SS   + V ++  N+ +P+ T       LSP++    P+  + TV   D          +I+     + FR   SF GS    ++ I  +     P  +   +QA D G+P   S    + +TS     ++    FE+      I     EF   +  +++  +    S+  + F  T   A F ++   G I I+  +  +     ELE+  S+ K   A   V V +   N N P        A    N P  + V  L   D D   N   TYSI + N    F I+   G++ T++ +  + +   YTL I   D     ++ + V+
Sbjct:  140 LDTNDLRPLFSPTSYSVSLPENTAIRTSIARVSATDADIGTNGEFYYSFKDRTDM--FAIHPTSGVIVLTGRLDYLETKLYEMEILAADRGMKLYGSSGISSMAKLTVHIEQANECAPVITA----VTLSPSELDRDPAYAIVTVDDCDQGANGDIASLSIVAGDLLQQFRTVRSFPGSKEYKVKAIGGIDWDSHPFGYNLTLQAKDKGTPPQFSSVKVIHVTSPQF--KAGPVKFEKDVYRAEIS----EFAPPNTPVVMVKAIPAYSHLRYVFKSTPGKAKFSLNYNTGLISILEPVKRQQAAHFELEVTTSDRK---ASTKVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYSIANLNHVP-FAIDHFTGAVSTSENLDYELMPRVYTLRIRASDWGLPYRREVEVL 554          
The following BLAST results are available for this feature:
BLAST of TCONS_00071935 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FAT11.918e-3229.84Protocadherin Fat 1 OS=Homo sapiens GN=FAT1 PE=1 S... [more]
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