TCONS_00071461 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071461
Unique NameTCONS_00071461
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2695

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071461 ID=TCONS_00071461|Name=TCONS_00071461|organism=Clytia hemisphaerica|type=transcript|length=2695bp
AATAGgttaaataaaaatacaaaaaaaatatggCAGGAATGAAATTTGAG
TACGATGAAAAGGGAACAacattttattactttattCTTTCATTTTGTGC
TATATTCTTGATCCCAACAACCTATTATTTATTCCCCGAtgattcaaaga
aaaagaagacagaAGATGACATAAATGAAAAGAGGAAGCCATGTTACTGT
CCTCCATGTATGGCAAAACAAGATTTGATTGTCAAAAAGATTcctaagaa
aaaaatatacctTATACGAGCAGTGCTAATAATCTTGTGGGCATTATTGA
TCACTGGAGTTGTCAAAgtatcacaatttgaaaaagaatatAGTGAATAT
AATCCTTATGACATCTTACAGATAGAAGTTgGTGCTACCCAAGCAGAAAT
TAGGAAGAAATACAGAGATCTTAGTAAGCTGAACCATCCTGACAAAGGAG
GAGATGCTGTTGTTTTCATGAAGATTTCGAAAGCTTATCAAGCTCTAACA
GatgaagaaactaaaaagaATTGGGAAGACTATGGCAATCCTGATGGGCC
AGGAGCAACACAGTTTGGCATTGCTCTACCATCTTGGATTGTCGATAAGA
AGAACTCAATGTGGGTTCTTGGGGCATACATGCTTGCTTTCATCATTATA
CTGCCAATAGTTGTGGGCTCATGGTGGTATCGTTCTATACAATACAGTGC
AGAAGAAGTTTTACTTGATACAGAACaattattttggtattttcttcATC
GGACACCTAACATGTCACTAAAACGTGCAATAATGATACTCGCTGGTGCA
ttagaatttgataaaagtcacAATGCAGAAGTACAGGAAAGACCAAGTGA
CAATGTTGAACTTCCACAGCTAATGAGAGAGTTACCGCAGCTGAACGAGA
AGAATAAAGAACGACCTCTATGTTTTGCATACAGTATCAAAGCACGAGCG
CTTATGCATGCTCATTTCTCTAGGATAGCTTTACCACAACAAACACTATT
AAAAGATTTAGAATTAATTTTGAAGAAATCACCAACGTTAGTACGTGAGA
TGATTAATATCGTTGGCCAGTTGATGTATTTAGCCAAAATGGGAAGAGta
tCTCAACCTCCAAAACTTGAAACTATGGAGAATTTAATGAAATTGAGTCA
GATGCTGATACAAGGAGTTTGGGAATCTAAATCGACATTTCAGATGTTAC
CTCACATTTCACANAAATTGAGTCAGATGTTGATACAAGGTGTTTGGGAA
TCTAAATCGACATTTCAGATGTTACCTCACATTTCACAAGAAAACCTACG
TCATTTCAATACTAAAAAGagGAAAATAAAGACGATTCGACAGTTTGTTG
GGATGAACAACACTGACCGACGGATGCTTTTGCGGACGTTATCGGATGAA
CAATATCAAGATGTATTAAATGTGTGTTCTTCTTTCCCTCATCTTGAAAT
TGAGGCTACAACTAGAGtCATCGATGACGAAGATATGGAAACTGTGACAG
TAGGTTCCACTGTCACCGCCCTGGTCACACTCACCAGAAAAACTATGGAA
gaGTTCTTTGGTGATGAAAGTGAAGAAGTATCTTTGAATAATATCGAAAA
TAACGATGACGCTACAGCGTCACCGAAGCCAGTCAAAGGTTGGCAACGTA
AAGTAAAGAAAGGGAAAGGAGCTAAGAAGCCAGTCAAAAAGCAAcctgtc
aaaaagaagaaaaaagaggaTGAGAAACAAGAAgacaaaacagaaaacaa
agaagaaaaagatgagGAAGCTGATGAAGAATCTTATGACGgCGTGGAAA
ATATGGATAGCGAAGATGAGAATGCAGCCGATGATGAGGCGGACGAACAA
GCAGACGAAGCGGATGACAAAAAGGATGAAGAAGATGATGATGAGGATGA
AGGAAATATGGTCGAAAGAGACGATGGGGCGGATGATGAATGGTCCAGTA
TAAAAGATGATATGATGCAACCTGATCGTCTCTTAGATGCCAAATCCAAA
GAAAGTCATATCGTTCATTGTCCTTACTATCCAATGGAAAAACACGAATA
TTGGTGGGTATACTTGATCAATAAGAAGAATAATCAATTAGTCACAGCTC
CACAGCAAGTCACCAATCTCAAAGTTACTGAAAAGGTGCAATTGAAATTC
TCAGCGCCAGAGAAACCAGGCATTTATCAATACATTGTGGTGGTCAAGTC
AGATTCTTATGTTGATTTCGATATGACTAAACCTCTAAAAGTGGCAGTAT
CAGAAGCGAAAGATTTCGATCCTGGAGAGCATTGGAATTATTCGAGTGAA
GATGACGATAAAGATGATTCCGGTGAAAGCGTTTACgaaactgaagaaga
agatgatgatgatgacgatgagGATTAATCACGCCATCAGGGTGGAACGC
CCGTCAAACAACCGCCCGAATAGTCAAAAGTGTCAAGGGCGTCCGAACTT
CAGATCATGGTCTCTCAGACAGATCTTTTTAGACTTGTCCAAGGAAAACT
CGTTCCAAAACAACTTTTCGAAAAAGGTTACCAcatgtttgatttttaaa
acaaatttcagACAATTCTAGCTTCTCTTTTATATTGACCACGCCCAAGG
GTTTTTAGTACTTTACTTTCGCACCTCTTAAGCTAAAGTGCCGCTCGTAT
ATTTCCCTCTTTTTAATTATTCAGTACTGAatacaaataataaaa
Run BLAST on NCBI

transcript from alignment at scaffold_60:1465283..1480225-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071461 ID=TCONS_00071461|Name=TCONS_00071461|organism=Clytia hemisphaerica|type=transcript|length=14943bp|location=Sequence derived from alignment at scaffold_60:1465283..1480225- (Clytia hemisphaerica)
AATAGGTTAAATAAAAATACAAAAAAAATATGGCAGGAATGAAATTTGAG
TACGATGAAAAGGGAACAACATTTTATTACTTTATTCTTTCATTTTGTGC
TATATTCTTGATCCCAACAACCTATTATTTATTCCCCGATGATTCAAAGA
AAAAGAAGACAGAAGGTATGTAATCATAATTTTGTATACATTAATTGGAT
AACTGTAATCTATGATTTTTTAGACCAATTCTAAAGTGGCAGAGTTTTCT
GTTTATCATTTCACTTACATTTTGATTGTAGATTTAAAGAGTAGTTATAA
ATTATTATAAGTCTAATGAACTGCCAGTATTCAGTATTATATTGATTCTG
TATTTTTATTTATCCCAGATGACATAAATGAAAAGAGGAAGCCATGTTAC
TGTCCTCCATGTATGGCAAAACAAGATTTGATTGTCAAAAAGATTCCTAA
GAAAAAAATATACCTTATGTATGTGTTATTACTTCTACTTTAATTGTTTT
TCAGTTGTCTATTCAATACAATCTACTATAATATACGCTTTTTTTATAAG
AACATCTATAAAAATACCCTAAGATTACGTTCTAGAGTTTCACAGAATTT
GATAAGAATACAGTCATTTCGTATTTGGTTAACAGAAAAACTTCTTCTTT
TGTTAGACTTTTAAATTGAAACTGTGAGGCAGAAATATGATTTTAGCTCC
CAATGTGCACTCAAAAGTCCCAAACTCTCAAATCTGCTCAAATTGATCAT
TTCTCATGATGTTTGTTGAAAAGTCACTAGTCTAAGAAGTAAGAATGGGT
TAAGAATTTTTTACCCTCAATTTTGGCAATTTCTTAAAAATACTTGACCC
TCATCCAAACTACTATTCTTATAAAAAAATGTGTTTATTTGGTTTGGTGT
TCAATCCAGCTTCTTCAGGATAAAGAACATCAAAGGACATACTCTAATAA
CATTAAAAATTCTTTGAACTTTTCAGATCTTATCAATTTCTCATGCTTTT
TTCTAGACGAGCAGTGCTAATAATCTTGTGGGCATTATTGATCACTGGAG
TTGTCAAAGTATCACAATTTGAAAAAGAATATAGTGAATATAATCCTTAT
GACATCTTACAGATAGAAGTTGTAAGTTGATTTTGTTGTGGACCCGTTCT
TTTTTTCTTTTATTCTTGTTTGGATTCAATTGCAACTTTTTAACCAGGTT
AGAGGAAAAGAAGTGTGAACCAGAGTTGATAATGAAATGGGCTAAGTTAA
AGGTCTAAGTGGGCTTTCTACCAAGTTTGGTTCTTAAGGTGATAACCTTT
CTTTGAGTTTGATAAATATTGAAATAATTGTCATCTTTTGTTTTTATTTT
TTTCTTCTAGGGTGCTACCCAAGCAGAAATTAGGAAGAAATACAGAGATC
TTAGTAAGCTGAACCATCCTGACAAAGGAGGAGATGCTGTTGTTTTCATG
AAGATTTCGAAAGCTTATCAAGCGTAAGTAAATTCAAAATGAAAAAAACT
AATTTTATGTTTTAAGGTTAATAATCCTAATCAATTGTTACTGATGGGCC
AACCTAGTTGTAACAGTTATTTTATTGATTCCTAAAATTTTAAGGTCAAT
CATACCCGTGAAAACAACTAGTTGAATTGGTTTTGCTTTCAAAGCTTTTG
TCTTAGGAAACTATTCACGTCTTTGTAATTTAGACCTTGCCTTTAGACCA
TCTACAAACTCTGATTTTGAATGGTCCTGGCCGCTCGTTTGATCAGTCAT
GGTCGCTTGTTAGTAACAATTACATCAAAAAAATTGTTATGAAATTTCTC
TAAATTAACTGGTCATTTACCAGCCCTTAAAAGACTGTCTAAGGGCCGGT
TCAATTTTCAGGTACTTAAAATCCCTTTGGGAGTCTTATTATACCTGGCT
AGAGTAAGATTAATGAAATTCATCATTCTTTTGATTCAAGTCTAACAGAT
GAAGAAACTAAAAAGAATTGGGAAGACTATGGCAATCCTGATGGGCCAGG
AGGTTTGCTAAAATTTTTAGATTCATTTCTTAATAAACATAAGTAAACTT
TCTAAATGAAAGACTAAAGCGCTGATATGACAACATTTCTCCTAGCAGGC
ATCCATAGAAAATATCAGTCGTGCTTGCAGGCCCTATGTCTGATTGAACT
GTCTTTTCTATTGGTGGTATCAAATGGTGAACGGTTCTTAGCGCTCCTAT
AGTAGGAATTAGTTACACCCAGTCAAGAAAAGAACAAGATGTAATGCACC
TTCCCCCCTGCCTGGAATGGTAACAAAGCTATATTCACAAAATTTCTTTT
GGATTAGAATTTTTTTTTGAATTAATTTCTTCAATAACAAATCTTTACAC
TTTCAGCAACACAGTTTGGCATTGCTCTACCATCTTGGATTGTCGATAAG
AAGAACTCAATGTGGGTTCTTGGGGCATACATGCTTGCTTTCATCATTAT
ACTGCCAATAGTTGTGGTATGTTTTCACAAAATTCATTTTTTCAAAAAAC
CTCTAAATTGTTTAAACTGAAATGAATAAAAAAAGTGGCCTGATTGGACT
GAAAATTTGTCTGAATATCTTAGATTTTAGTAGAATTAACTCAAGTGATA
AACTCTTGGATGAAAACAAAAATTCTCCCCTCCAACAAAGATTGTGCTAA
ATTAATGGCTTATTAGATTGTAATATTTAACTTATAAAAGAAACTGAATG
TTGTTTTTAGGGCTCATGGTGGTATCGTTCTATACAATACAGTGCAGAAG
AAGTTTTACTTGATACAGAACAATTATTTTGGTATTTTCTTCATCGGACA
CCTAACATGTCACTAAAACGTGAGCAGATGTTTGAACTGAAACATTTTGT
TAATTTTTGCGCATAGAGTGTTTTTCTATCACTGCTACACTCTATATTCG
AATATTAACATTGCATAATCTTGATACCAAATTTTGTGCGTTTTTGGTCC
TCTCTGTAAAATATTGCATGAGAAACCGGTACTTTTTCTCAGTGCATTAT
GAATGAAGCAGAATGTGAAGTTCATCGCATGTGGGCAATATCATATTCTA
AGGAGGAAGCAAGTAGTTGGGCTTAGCATTGATTATCGAATATACCCTGA
TTTTCATTTGCATTGATTTTCTTTCATCTCAGGTGCAATAATGATACTCG
CTGGTGCATTAGAATTTGATAAAAGTCACAATGCAGAAGTACAGGAAAGA
CCAAGTGACAATGTTGAACTTCCACAGGTAAGTTACTGGTCCTCTAATTC
CAATTAATTTATTATTATTCATTATTAAGTTATTATGTAATTTTCTTGTC
ACAGCTGACTCAATTTTCCTAGTATTCACACTAATATATACTTAAAAAAC
AGGTCGCATTTTGAGTGACAAAGTTTTCCATGGACACGTTCTAATGTTCT
GTCAATCGCTAAATCAAGTCAATCAATTTTGTATAAAGCCTGCCTCTATT
TTGAGTTAATGTTTGAAATGACAAAATGGTTCCCTTCTATTTTAGCTAAT
GAGAGAGTTACCGCAGCTGAACGAGAAGAATAAAGAACGACCTCTATGTT
TTGCATACAGTATCAAAGCACGAGCGCTTATGCATGCTCATTTCTCTAGG
ATAGCTTTACCACAACAAACACTATTAAAAGGTAAGGTTGATGCTGGTCG
TGGTAGATCATTCTGATAGTTAAACGATTTAGTATCAATTACCTATTGTT
TATATTCTTATTATCTTGGTATTTTTTGAGAGAATTGATGATATATTCTT
AGTTGCCAGAAAGGCACTGGGACTATTGATATTTTCATTAAAGTACCCTT
ATCTTTTCTTCTTCACAGATTTAGAATTAATTTTGAAGAAATCACCAACG
TTAGTACGTGAGATGATTAATATCGTTGGCCAGTTGATGTATTTAGCCAA
AATGGGAAGAGGTATGAAAAATGTTTCTTGTTTGTTGCAGATATTGATTT
TCAATAACCATGGTAGTCTGGAGGCTTACTAACTTTTCCTCGATTTTACA
AAGCTCACATGAGTGATTCAAATTTGAATGTTTACAAAAATCAGCTAAGG
AAAAGGCGTGAACGACTTTATAGAATGTTTGTATAATACTTTGCTACTAT
TGATTAAATTCATTCTGTCTTCTTTATTTTTTTCAGTATCTCAACCTCCA
AAACTTGAAACTATGGAGAATTTAATGAAATTGAGTCAGATGCTGATACA
AGGAGTTTGGGAATCTAAATCGACATTTCAGATGTTACCTCACATTTCAC
ANAAATTGAGTCAGATGTTGATACAAGGTGTTTGGGAATCTAAATCGACA
TTTCAGATGTTACCTCACATTTCACAAGAAAACCTACGTCATTTCAATAC
TAAAAAGGTATCACTTGCCATTCTTAAAGAAACAAATGTTGAAATTCAGT
AGATATCCGACTGAAAAAATCCTTTTCCTGTGTCCATTTTCATAAGAGTT
TGTTATGGTTTACAGAGCGGTGGCTTAACTTTTTTTGTTTGCTTATTCTC
GGCTTTTCAACATTTACTGTTTGTGTCATATAATTCTGGGCGCTACTAGA
AATGTTATAAAGATGAGGTATAGTGTCTTAGTGGGTTCGTTACCACCTTT
GAAAAAGGCAAACAAAACTGTTTTGACCCCCCTCTTCTTGTCGTCCCCTT
TTTAAAATTTTTTATATCCTAACAACTATTTGAAGCTTTTGCAATTTCAA
ACTGTCTTATCGTTATAACTGTACAATAGCTTTGAGTAAGCTTTAAAATA
AGTGCTCAAGTTGTAGAGTGGATCATTGTAACAGTTTGAAAAATTCTTTT
TTCAGAGGAAAATAAAGACGATTCGACAGTTTGTTGGGATGAACAACACT
GACCGACGGTAAAGGCTTTTAGTTTAACGTGAAGGAATTCAAAGATTACT
TTTATAACAACCTGTATAAACCTGTATGAAAGAATGTATTTTGACAGAGA
ATCGTTTCTACTTTTCACTTTTTCACTGATCTGTTCAGTTTTATAGAAAC
CTTTGTTAAATGCTTTCAGGATGCTTTTGCGGACGTTATCGGATGAACAA
TATCAAGATGTATTAAATGTGTGTTCTTCTTTCCCTCATCTTGAAATTGA
GGCTACAACTAGAGGTACTGTTCATTATCAAATTCCAATCTTAACCTCTC
TACACGCTTATGGTTTGAAGAATTTTCGTTGATGCTTTTCTGGGAAAAAA
CATAAATCTCCTATGAGGTATAAAGTCGAAATTTCCAGACAGGAGATAAT
TATATACGAAATTCCTTATAAGCATTTTCATAAAGAGCCAGATAATTCAC
ACCCCTCAGGTAGAAATACAGTGTCTAGCACTGATGTTTGAGGACCCATT
TTAAAAGTCTTTCGGCGTTAGAAATTTTGGATTTTCTTATTGTTTCCTTT
TCTTTTTAGTCATCGATGACGAAGATATGGAAACTGTGACAGTAGGTTCC
ACTGTCACCGCCCTGGTCACACTCACCAGAAAAACTATGGAAGTATGTAC
ACCACTTCCTTTTTGTATAGTAACGGGTGTTATTTTGTTTCTGCTTTCTC
TCAAGCTAAAACGAGACTGAATAAGTTTTTCAGGTGGGCGTCAGTGTAGC
CTTAGCTTTCTCTTATAAATAAGTTGCATTATGGTTAATGTTTCTTTTAA
TAAGAAGATTTGCTTGAGTTAGAGACGAAGACGAAATAGAGTGGTGCTTG
TCACAAAAGACTACCTTGTTCAAATATTACGCTTTCTTTTTTGGACGGAA
AAATCCATCGAATAACACTGTTTTTATAAAAAAAAATTATTTTTACATTT
TAGGAGTTCTTTGGTGATGAAAGTGAAGAAGTATCTTTGAATAATATCGA
AAATAACGATGACGTAAGAATTTCGAAATTTCTACAAATTGATATTTTGT
TTAAAACGCTAAATTTGACAATCATCTAAAAGAATTGCCCGATAATTTTA
CAGTCCATGTTTTCTAGAGACGCTAGAGTTTTATTCTGTTTTATCCTATT
TCTCAGGTTTGTTAAACGGAAAAAAGTTTTCGTCTTCATTTTGTTATCTA
AGTAATTGTATTATCCCAGTTATTGATTTTCAATGTTCATATTCAACAGG
CTACAGCGTCACCGAAGCCGGTCAAAGGTTGGCAACGTAAAGTAAAGAAA
GGGAAAGGAGCTAAGAAGCCAGTCAAAAAGCAACCTGTCAAAAAGAAGAA
AAAAGAGGATGANCGCCCTGGTCACACTCACCAGAAAAACTATGGAAGTA
TGTACACCACTTCCTTTTTGTATAGTAACGGGTGTTATTTTGTTTCTGCT
TTCTCTCAAGCTAAAACGAGACTGAATAAGTTTTTCAGGTGGGCGTCAGT
GTAGCCTTAGCTTTCTCTTATAAATAAGTTGCATTATGGTTAATGTTTCT
TTTAATAAGAAGATTTGCTTGAGTTAGAGACGAAGACGAAATAGAGTGGT
GCTTGTCACAAAAGACTACCTTGTTCAAATATTACGCTTTCTTTTTTGGA
CGGAAAAATCCATCGAATAACACTGTTTTTATAAAAAAAAATTATTTTTA
CATTTTAGGAGTTCTTTGGTGATGAAAGTGAAGAAGTGTCTTTGAATAAT
ATCGAAAATAACGATGACGTAAGAATTTCGAAATTTCTACAAATTGATAT
TTTGTTTAAAACGCTAAATTTGACAATCATCTAAAAGAATTGCCCGATAA
TTTTACAGTCCATGTTTTCTAGAGACGCTAGAGTTTTATTCTGTTTTATC
CTATTTCTCAGGTTTGTTAAACGGAAAAAAGTTTTCGTCTTCATTTTGTT
ATCTAAGTAATTGTATTATCCCAGTCATTGATTTTCAATGTTCATATTCA
ACAGGCTACAGCGTCACCGAAGCCAGTCAAAGGTTGGCAACGTAAAGTAA
AGAAAGGGAAAGGAGCTAAGAAGCCAGTCAAAAAGCAACCTGTCAAAAAG
AAGAAAAAAGAGGATGAGGTAAGGTGCTAAGCTATAACGAAGTTTAAAGT
AAATAATAAGTAATTGCATTAAACTTATTAAGGAATCGTTTAAAATACCG
ACCTATTCTAAACAATTGTGGAGTTTTCTCAGGTTTTTTTATTTATCCTT
GAGTTATGCTACGACTATATAGAATTATTACAATCCCTTTATGAATTGAG
CAAATATTTAAGCCATTTGACTAAATACAAAATAATTATACTTAAATTTA
TTTTTGATAAATTACGAACAATTCTGAAGATCCAAAAATTGATAACAATC
ACTAATCTTGGTACCGATGTACTAGTCACGATGTCTGAGATTTTAGTACT
GACCCCTGGGGTGGCTTGATGGTGCTTGTCAGAATACTTTGCATTCGGAC
TAATGGTGTTTTCTTTTCCTTTACATCGAAAGAAACAAGAAGACAAAACA
GAAAACAAAGAAGAAAAAGATGAGGAAGCTGATGAAGAATCTTATGACGG
GTAACATTTTTTTATTTAACTGAATGCACTTCAAACGATAGATTTGTTTC
TATGTGAGACCCGGATCATCAGATTATTAGCGACCAGAAGGTGTGACCAC
GCTATAGTGCTTTATTCATGTGGANGGATTATTTGCGACCAGAAGGTGTG
ACCACGCTATAGTGCTTTATTCATGTGGAGTTCAAGCTCAACCCACTCTT
TTTTAGAGTGCCTAAATATTTCATTGACTGTCTTGTGTTGATCTGAGTTT
TTCTGACATTTATTTTTATTCAAAGTACTCATTTCATGGGCGGGGTCTGG
AAGCTTTCAAATCCCTCTTCGACATACTGAACTGGATTCATTAAAATTCA
TTAAAATGAAAAGGCTGGTGCGTGAAAATTTCACTACAGTGAAGTCTGTT
ATAACTCAACACGCGCGGGGAGCTGCGGGGAGCGCAAATTTGTTCGATTT
TGACAAAACTTATTTTATTTAACATATCTAATATTTGGCGTGCCGGGACT
GCCTCCGTGCAAAAATTGTGTAGTATATATTTAATATTTGGCGTGTCGGG
ATTGCCACCGTGCGATAATACTTAATATGCGGAAAAAAAATTTGTTCGAT
TTAAGAAAGTTTTGCGATGTAAAGAAAGGCTTTTACGACATTTTTAACTG
AAGGGACTAGAAAATTTGTTCGAATTAAGGAGACGGAGTTATAGAGGCTG
GAGTTAAGACGAGATTAGAGTTGATTTAGGATTTGAGTTAAAGAGACTTC
AGTGTTTTTAGTCAAACTGGCTATTTTCCGTTGATAAGTCTACGGAGTTA
ATAATTTTAAATAAGATGAATTCTTTTCTCATTCAGCGTGGAAAATATGG
ATAGCGAAGATGAGAATGCAGCCGATGATGAGGCGGACGAACAAGCAGAC
GAAGCGGATGACAAAAAGGATGAAGAAGATGATGATGAGGATGAAGGTAA
GAAAGATTTTCTCAGGGTATGCATAGAAGTTGGGAAATATTTTCCTTTAG
CATTAATAATGACATTTTCATCGCGTGACTTTTGTCGTAGTTTCTCTAGT
CACTTAGTCTTACTCAGCTATTGAGTCTCGGTTTTCTTATGCCTTTCTAT
TATTTCTGCTCGGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGAGTTTCAAAAGATT
TTCCAAAGGGGGGAAAAGGAAAAATGGAAATCCAGGGGGGATTTCAAAAA
TGTGCAACAAAGTTTTTTTCGGGGGGTGGGGAAGAACTTTTCACCTTTTT
TCACCTTTTTTCACCTTTTTTAGTTTTTTTACATATGCATGTTTTTCTTC
CACAAATTACATGGCAGATGTTCTTTCTTGGATAAATAGTTATCTTTTGT
AGAATGTGTGAATTATAATTGATAGAAAACATAATAATTTTTTTATTATC
GATACCATCTTGTCTCCAAAATATTTGGTTCTTCTTACAAGAAGTTAGGA
TATAATAATATATGTGCTATGAGGCGAGACCAATTTAATTTGTTGTTCTA
CGGGCAGATTGTTAGCAAAATATGGGTCGGTTGGTCGGTAAAATAAAAAT
AAAATTTTCATTTATCAGGGTTGTTAAAGTACCGAAAATGTTTTCCAAAA
AATATCTGGTTCAAAAATTCACTTTTTTTTGTCTTCGATGAAGATGATAA
AATCTTAATGTATGGAAATAATGCGTGATTTTCTAACTTTTTCAATTTTT
TTAATTAATTTTCAGCTTTATTCAAATCTGATTCTTACAAATAACTAGTG
TGTAAAATATATTGTAGTGGAAATTCAATATTATTATTTTTTTGATTTTA
GCAAAAATAGGGTCGGTCGGGCCCGTAGAACAACAAATTAAATTGGTCTC
GCCTGAATAAAAATAAAATCGAAAATTTTTAACATATAAACAGAATACAG
TAGGCCAGAGATGAGATTGGCAGTTATTATTATTAAATGCATATGAGTAG
ATTGTATCATCGATAAGAAGCCATCGATAATGACTCAATCTGGGGTTGGT
CTAAGTATCAATCAGATTCATGCTCCCTGGTCAGTAAAATCTGGTTCTAT
GCATTCATTTTCGGTATTTCTATTCTGGTCTGTAAAATATTTAGGTACTC
CACAACCTAGCCCAATTGGCTACCCCAATTGGCTACCCTGCTCTTTAGAC
CAACCCCTCAATCTGGATAATTGGAGCTGAGTGGATGAAGAACGGAAATA
TACCTTGGTATCTAGACTTTAGATTCCCTTTTAAAATTGAATAATTGAAT
AATAAATAAATAATATTAGTAATAAATAAGTATAAATGGTAATTAGAGGC
AAAGCAAAAATGAAGCAGGACTAAAGAGCAAGCTTAATGTTGACGAACTA
TTCGTTATAATAGTATTGAGATTTTACTGCTTGCTGTTTTGATTTATTGA
CTTGAAGTGAAGTTACAAGATAGCGACTAAAGGATGAGAGGCTTTTGCAT
TATCTAGGTAGGTTCAGAGATTGTACCATTAGTCCAGGGAAAGTGTGTCA
ATTGTGAGTTTTTGGCTAGAAAGCATGAAATTTGATACAGTGGTACCTTA
GGGGGTAAGAAACATTTTGAACTTCTGATTCACTTCCGGAACACCTGTTT
GTGTATCATATAATAGTTAAGAAATTTAACACTTCTATACACCTTTTCGA
CCGTAGTCACGCGGTCAGGCGCGTGCCACTTATATTTAATTTACCACCCT
AAACTCGATCCAATCCTTTTTTGTTACATTTTTTCTATTGTCTTCAGGTG
CGAAAAAAGACTGGAACGGTTTTAGGGTGGTAAAATGGACAAAAAATGAC
CGCGCGGCAATTTGCGGCTAGGGTCGAAAAGGTATATTGAAAAGGACACG
TGTAAAAAAGGCACAAATGAATAAATGTAGATTAGATATTGGTTTAATTG
GTTCTCCATGTAGAGTTTAGCCAATGATGAAACATAAACTTATAAACTTA
TAGGATCAGAAGTATCGAGACTAATATATCGAGTTTCAAAACGAAGATAG
AATTTAGAAATTCAAAAATAGGAGAATTCTAAAAAAAAGAAGCTAAATCT
AATAAAAACATTTATTACATTTTTTATTAAAATTTTCCTTTTTCATAATA
TTTTTCACATTTGCATAATGCATTATGTCAGGAATATCTAGAGAACTTTT
ATTTCATGAGTCTTGCAGAGAAGTGCGACTTATTTTTAAATTGGTTTTCC
ACCGTCATATAGTAATTTATTGCTGTAATTTCGAAAGCAATAGAGAAAAT
GAATGCAAATGGTAGCCACGATTTCACTATGAAAAATGGTAATATCACTA
TCGATAGCGATAATCTCAGCGGTGAAATTCATCCAGAAGTTCTAGTGAAT
ATTCGTGAAGTAGCCGAAGAAACTTTTTATTACTACGTTCTTAATATTTT
GCCTGGTTTGGTTGCGATTGGTGGTTTCTGGAATCTGCTTATCATCGTTT
ACTTCGTCAAAATCAATTTGAAGAAAGGATTAAAACGAATGAGCTCGTAT
CATCTTCTGATCATTAATCTTGCTTTGGCCGATCTAGCCNGAAGGCTCTA
TATGATTTTATTTTTACTCCAATTCTCAATTTCGGTTTTTTATTAAAAGA
CTATTCCATGCTGGCTTCTTAAGTAGAAAGAATTAAAAAATTTAAACACG
TTTAACAATTGTGTTTTGAAATTTACGCTGTGCGGTACTCTAAAAGATGA
AATTAGAATCCAGATTTTGTATTTATAGAAGCTATTTCCTGCTGTTGGGC
AAATTGGCTGTACCAAGAAATTGTTATTGTTTTTCTTGCTCTTATATTTT
TTGTGATTCATTTGTTCAAAAATAAACATCCCGACACAATGTNCACCTCT
CATTTCCTTTTCAAACACACATGGGAACTCCCGGCATTTGCATGTCTTAT
ATTCCGTGTTTATTTCCCGAACGTTGTTCCAATGACAGCATCTTGGGCAC
TGACCTTAATTTCTTTTGCTAGATATCGCTCCATTACCTACCCAATGGCT
GTGCGAATCAATAANTTTGATTTAAAACTAAAGAAATATCACCTTGATAC
TCTTCACTCTTGGTACGCCCCTCGCTTTTTTTTTTATTTTTGTAAAAATT
TTCCGAACGGGACATTTTCATTTTAATCCTCCTGCTAATCAATACACGCT
TTTTTAAAGAATATCTTCTATAAAAATATCAGGGTGAAAATTGGCCAAAT
CGTAAGAACCCCTAAGAAAAACCTCTAGGGTGAGTTTCACAGAATTTGAT
AAGAATACAGTTATTTTGTATTAGGTTAATAGAAAAAAACTGCTTCCTTT
GTTAGACTTGAATTTACACTTTGAGGCAGAAATGTAATTTTAGCTCCAAA
TGTTCATTCAAAATTGATCATTTCTCATGTTTGTAAAAAAGTCAAGTCTG
AAAAAGGAAGAATATGCTAAGAATATTTCACCCTCAATTTTTGCAATTTC
TTAAGAATGCTTGACCCTCATCCAAAGTAAAGATTGGTTATGTTTACAGT
TTGTTGTTGTGTAATTTCACAAAACACTCTGCCTGTCATTTTAGCAGAAT
ACCTAGATCCATTTTATAAGAACAATAAAAACCTTGAATGTAAAAATTTA
AACAGTTTGAACATTTTGATGTTTGAGCTGCTGAAAAATAAGAATACCCG
AACAAGAAGAATTCATCGCGTTGAGAATAATGAAAAGTGAAATTATTCTT
TCAGGAAATATGGTCGAAAGAGACGATGGGGCGGATGATGAATGGTCCAG
TATAAAAGATGATATGATGCAACCTGATCGTCTCTTAGATGCCAAATCCA
AAGAAAGTCATATCGTTCATTGTCCTTACTATCCAATGGTTGGTATAATA
CTTGTTTTCTTTATAAGCATTCCGCTTATAAGCATATCTTGGCTCTTATA
TGGCAAAAATTTAAGCATAAGCTAAGCATTACCTTGAGCCTATGAAAAAT
TTATTTTCCTGATTTTGGCTGTTTTCAGCTCGGATTTTACGGATTTTTAG
AATTTCCCTCAAATTTTGCTTGATGTGATAAGCATCCTTATAAGTATTTT
TCAGTCTTGTCAAGTCATCGATCTAAGCATCTTCGAGCCTGTTTTCGAAT
TATTGTATGCTTAAGCGAGGTCAATTTAATTGATAATCTAATGGTTAAAA
TGAAAAATTGAACATAAAATTCTTAAAGCCTTGCAAAAACTAGCAAAATT
TTGAAAATTTGGGAGTCTGTGAAGGAATGCAAATAAAAATGTACTATCAA
GATGAATTAGATTTTTATTTCGATTTTTGGAATTTCAGAGTCGGTCGGGC
TTAGCCCGAGCCCCCTTTACAAGTTGTAAAACAATTAATCAAACTGGTCT
CGCCTTATTTAAAAACTTCAGATGAGAAACTTACGTGTTCATTTCGATTT
TTTAAACTGAATTTAACTGAATCTTTTTCGTTGGATAGGAAAAACACGAA
TATTGGTGGGTATACTTGATCAATAAGAAGAATAATCAATTAGTCACAGC
TCCACAGCAAGTCACCAATCTCAAAGTTACTGAAAAGGTTTGTCTACACC
TTGCAATACTAAGTGCTTCAAATTTATTTTTCGATTGTTTTCCAAACCCG
TTTATTAAATATTTTCATCAGTCAAGAGAAGATCTATAGTTACCTTATTT
TGGGGGTACTTAGATTTCCTACCCCCTCAACTCCGAACCCCCCGGGAAGT
AGTTAGCACTGGCCTTAAAATACATTATTTAAAGTATCTCCCAAAAGCAA
GGACATGCTAAACGTTGATTTGGTGACTTCGATTTTAAAACTTTGACTAC
TTTTGACTACCCACTGACCAGAACTCGTTTTCTCACCCTTCCTAGGTGCA
ATTGAAATTCTCAGCGCCAGAGAAACCAGGCATTTATCAATACATTGTGG
TGGTCAAGTCAGATTCTTATGTTGATTTCGATATGACTAAACCTCTAAAA
GTAAGTACTGTTGAGTCTCTTTAATTTGACTCTCTATTATAACTGGAATG
TCTCCTTAACTCAAACAAGTTTTCTCATCCCTTCGGATAACAACCTGACT
GCATAAGTCCATAAAAAAATTGCGTTCCCCGTGCTTGTTCGAGTTATGGA
GACTCCACTTTAGCTCGTTTCTCAAATTTCTTATGTGATTCGGTAATAAA
TGCGTTCAACACGAAGACTAATGATATGAACTAATATTTTTAACATTTGA
ATATGGAATACGTGCATCGCGTGTATAATACATCTTACAAGTATTTTGTG
TATCTATTTTCATATATTCAAGCCCCTTTCATCATTTTTTAAGATGTCTT
TGAAATGACTGTTGCTTTTGTCACTAGACTTGTTCTAAAAATGATTTCTT
CTACGGACGCTGTTTGGATTGGAACGGGACAGCGTAGATTATTCTATTCA
CGATATGTACCATTGTAATGTTTTCTGATATTACATCACGGACCCAATTC
ATGATATGCACCACTGCAATGACTTCATGAAATTATGCAACATTTCTGTT
TTTGTTCCACCTAATACGTCACTTTTTCTATTGTTTGAGTGACGTATTGG
GTGGAAAATTTTAAAAGTTCTCAGAAGACTCTCCAGTGGTGCATATCATG
AATAGCTGATTGGTTCTAAGTGACGTAAAATCAGTCAATACGTCACTTTC
AACCAGTCAGATGTTTGCTCCGTGAAGACATTGCAATGGTGCATATCATG
AATATACATTTTGTTCCTTTGCAATTTCCTCAAATGATCCTCACTCCATG
TCCTGCAAATTGATATGGTGTTTTTCTGTTATTCCCAGGTGGCAGTATCA
GAAGCGAAAGATTTCGATCCTGGAGAGCATTGGAATTATTCGAGTGAAGA
TGACGATAAAGATGATTCCGGTGAAAGCGTTTACGAAACTGAAGAAGAAG
ATGATGATGATGACGATGAGGATTAATCACGCCATCAGGGTGGAACGCCC
GTCAAACAACCGCCCGAATAGTCAAAAGTGTCAAGGGCGTCCGAACTTCA
GATCATGGTCTCTCAGACAGATCTTTTTAGACTTGTCCAAGGAAAACTCG
TTCCAAAACAACTTTTCGAAAAAGGTTACCACATGTTTGATTTTTAAAAC
AAATTTCAGACAATTCTAGCTTCTCTTTTATATTGACCACGCCCAAGGGT
TTTTAGTACTTTACTTTCGCACCTCTTAAGCTAAAGTGCCGCTCGTATAT
TTCCCTCTTTTTAATTATTCAGTACTGAATACAAATAATAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044372XLOC_044372Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071461-exon-scaffold_60-1575043694:1480061..1480225TCONS_00071461-exon-scaffold_60-1575043694:1480061..1480225Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1575043694:1479758..1479857TCONS_00071461-exon-scaffold_60-1575043694:1479758..1479857Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1575043694:1479105..1479219TCONS_00071461-exon-scaffold_60-1575043694:1479105..1479219Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1575043694:1478753..1478865TCONS_00071461-exon-scaffold_60-1575043694:1478753..1478865Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1575043694:1478224..1478285TCONS_00071461-exon-scaffold_60-1575043694:1478224..1478285Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1575043694:1477760..1477869TCONS_00071461-exon-scaffold_60-1575043694:1477760..1477869Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1575043694:1477407..1477515TCONS_00071461-exon-scaffold_60-1575043694:1477407..1477515Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1575043694:1476999..1477093TCONS_00071461-exon-scaffold_60-1575043694:1476999..1477093Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1575043694:1476595..1476730TCONS_00071461-exon-scaffold_60-1575043694:1476595..1476730Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1575043694:1476315..1476407TCONS_00071461-exon-scaffold_60-1575043694:1476315..1476407Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1575043694:1475869..1476089TCONS_00071461-exon-scaffold_60-1575043694:1475869..1476089Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1575043694:1475368..1475420TCONS_00071461-exon-scaffold_60-1575043694:1475368..1475420Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1575043694:1475112..1475206TCONS_00071461-exon-scaffold_60-1575043694:1475112..1475206Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1575043694:1474734..1474816TCONS_00071461-exon-scaffold_60-1575043694:1474734..1474816Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1575043694:1474363..1474422TCONS_00071461-exon-scaffold_60-1575043694:1474363..1474422Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1575043694:1473258..1473371TCONS_00071461-exon-scaffold_60-1575043694:1473258..1473371Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1575043694:1472776..1472843TCONS_00071461-exon-scaffold_60-1575043694:1472776..1472843Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1575043694:1471830..1471939TCONS_00071461-exon-scaffold_60-1575043694:1471830..1471939Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1575043694:1467688..1467821TCONS_00071461-exon-scaffold_60-1575043694:1467688..1467821Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1575043694:1466989..1467087TCONS_00071461-exon-scaffold_60-1575043694:1466989..1467087Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1575043694:1466576..1466680TCONS_00071461-exon-scaffold_60-1575043694:1466576..1466680Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1575043694:1465283..1465737TCONS_00071461-exon-scaffold_60-1575043694:1465283..1465737Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1510915933:1480061..1480225TCONS_00071461-exon-scaffold_60-1510915933:1480061..1480225Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1510915933:1479758..1479857TCONS_00071461-exon-scaffold_60-1510915933:1479758..1479857Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1510915933:1479105..1479219TCONS_00071461-exon-scaffold_60-1510915933:1479105..1479219Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1510915933:1478753..1478865TCONS_00071461-exon-scaffold_60-1510915933:1478753..1478865Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1510915933:1478224..1478285TCONS_00071461-exon-scaffold_60-1510915933:1478224..1478285Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1510915933:1477760..1477869TCONS_00071461-exon-scaffold_60-1510915933:1477760..1477869Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1510915933:1477407..1477515TCONS_00071461-exon-scaffold_60-1510915933:1477407..1477515Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1510915933:1476999..1477093TCONS_00071461-exon-scaffold_60-1510915933:1476999..1477093Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1510915933:1476595..1476730TCONS_00071461-exon-scaffold_60-1510915933:1476595..1476730Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1510915933:1476315..1476407TCONS_00071461-exon-scaffold_60-1510915933:1476315..1476407Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1510915933:1475869..1476089TCONS_00071461-exon-scaffold_60-1510915933:1475869..1476089Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1510915933:1475368..1475420TCONS_00071461-exon-scaffold_60-1510915933:1475368..1475420Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1510915933:1475112..1475206TCONS_00071461-exon-scaffold_60-1510915933:1475112..1475206Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1510915933:1474734..1474816TCONS_00071461-exon-scaffold_60-1510915933:1474734..1474816Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1510915933:1474363..1474422TCONS_00071461-exon-scaffold_60-1510915933:1474363..1474422Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1510915933:1473258..1473371TCONS_00071461-exon-scaffold_60-1510915933:1473258..1473371Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1510915933:1472776..1472843TCONS_00071461-exon-scaffold_60-1510915933:1472776..1472843Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1510915933:1471830..1471939TCONS_00071461-exon-scaffold_60-1510915933:1471830..1471939Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1510915933:1467688..1467821TCONS_00071461-exon-scaffold_60-1510915933:1467688..1467821Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1510915933:1466989..1467087TCONS_00071461-exon-scaffold_60-1510915933:1466989..1467087Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1510915933:1466576..1466680TCONS_00071461-exon-scaffold_60-1510915933:1466576..1466680Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1510915933:1465283..1465737TCONS_00071461-exon-scaffold_60-1510915933:1465283..1465737Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1491911889:1480061..1480225TCONS_00071461-exon-scaffold_60-1491911889:1480061..1480225Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1491911889:1479758..1479857TCONS_00071461-exon-scaffold_60-1491911889:1479758..1479857Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1491911889:1479105..1479219TCONS_00071461-exon-scaffold_60-1491911889:1479105..1479219Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1491911889:1478753..1478865TCONS_00071461-exon-scaffold_60-1491911889:1478753..1478865Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1491911889:1478224..1478285TCONS_00071461-exon-scaffold_60-1491911889:1478224..1478285Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1491911889:1477760..1477869TCONS_00071461-exon-scaffold_60-1491911889:1477760..1477869Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1491911889:1477407..1477515TCONS_00071461-exon-scaffold_60-1491911889:1477407..1477515Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1491911889:1476999..1477093TCONS_00071461-exon-scaffold_60-1491911889:1476999..1477093Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1491911889:1476595..1476730TCONS_00071461-exon-scaffold_60-1491911889:1476595..1476730Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1491911889:1476315..1476407TCONS_00071461-exon-scaffold_60-1491911889:1476315..1476407Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1491911889:1475869..1476089TCONS_00071461-exon-scaffold_60-1491911889:1475869..1476089Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1491911889:1475368..1475420TCONS_00071461-exon-scaffold_60-1491911889:1475368..1475420Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1491911889:1475112..1475206TCONS_00071461-exon-scaffold_60-1491911889:1475112..1475206Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1491911889:1474734..1474816TCONS_00071461-exon-scaffold_60-1491911889:1474734..1474816Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1491911889:1474363..1474422TCONS_00071461-exon-scaffold_60-1491911889:1474363..1474422Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1491911889:1473258..1473371TCONS_00071461-exon-scaffold_60-1491911889:1473258..1473371Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1491911889:1472776..1472843TCONS_00071461-exon-scaffold_60-1491911889:1472776..1472843Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1491911889:1471830..1471939TCONS_00071461-exon-scaffold_60-1491911889:1471830..1471939Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1491911889:1467688..1467821TCONS_00071461-exon-scaffold_60-1491911889:1467688..1467821Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1491911889:1466989..1467087TCONS_00071461-exon-scaffold_60-1491911889:1466989..1467087Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1491911889:1466576..1466680TCONS_00071461-exon-scaffold_60-1491911889:1466576..1466680Clytia hemisphaericaexon
TCONS_00071461-exon-scaffold_60-1491911889:1465283..1465737TCONS_00071461-exon-scaffold_60-1491911889:1465283..1465737Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:1465283..1480225 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
77.5451	75.9077	40.5871	32.6548	32.9871	28.0847	72.9327	73.8171	37.3075	37.1298	35.9666	41.2702	36.6603	33.403	51.4412	56.6156	38.3926	44.0824	13.3531	16.6869	32.3459	29.0627	39.4038	44.5872	22.0161	27.8377	26.7591	20.8185	44.9914	34.1102
Blast
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BLAST of TCONS_00071461 vs. Swiss-Prot (Human)
Match: SEC63 (Translocation protein SEC63 homolog OS=Homo sapiens GN=SEC63 PE=1 SV=2)

HSP 1 Score: 478.789 bits (1231), Expect = 3.031e-155
Identity = 249/545 (45.69%), Postives = 355/545 (65.14%), Query Frame = 3 
Query:   30 MAGMKFEYDEKGTTFYYFILSFCAIFLIPTTYYLFPDDSKKKKTEDDINEKRKPCYCPPCMAKQDLIVKKIPKKKIYLIRAVLIILWALLITGVVKVSQFEKEYSEYNPYDILQIEVGATQAEIRKKYRDLSKLNHPDKGGDAVVFMKISKAYQALTDEETKKNWEDYGNPDGPGATQFGIALPSWIVDKKNSMWVLGAYMLAFIIILPIVVGSWWYRSIQYSAEEVLLDTEQLFWYFLHRTPNMSLKRAIMILAGALEFDKSHNAEVQERPSDNVELPQLMRELPQLNEKNKERPLCFAYSIKARALMHAHFSRIALPQQTLLKDLELILKKSPTLVREMINIVGQLMYLAKMG--RVSQPPKLETMENLMKLSQMLIQGVWESKSTFQMLPHISXKLSQMLIQGVWESKSTFQMLPHISQENLRHF-NTKKRKIKTIRQFVGMNNTDRRMLLRTLSDEQYQDVLNVCSSFPHLEIEATTRVIDDEDMETVTVGSTVTALVTLTRKTMEEFFGDESEEVSLNN--IENNDDATASPKPVKGWQR 1649
            MAG +F+YD+ G TF+YF+ SF  + +IP TYYL+P D    +  + I  K        CM  +  ++K  P     + + VL+  WAL +    KVS+ ++EY EYNPY++L ++ GAT AEI+K+YR LS   HPDKGGD V+FM+I+KAY ALTDEE++KNWE++GNPDGP AT FGIALP+WIVD+KNS+ VL  Y LAF++ILP+VVGSWWYRSI+YS +++L+ T Q++ YF+++T NM +KR IM+LAGA EFD  +N +   RP+DN+ +PQL+RE+  +N K  E PL   YS+KAR L+ +H +R+ +P +TL +D + +LKK P L++EM+N++ QL+ +A+    R  + P L ++EN MKLSQM +QG+ + KS               L+Q           LPHI ++NLR   N KK KIKTI+  V +  +DR  LL  L DE+Y++V+ V  SFP++ ++  ++V+DDED   +TVGS VT LV LTR+TM E F  E    +      E+    T   +   GWQ+
Sbjct:    1 MAGQQFQYDDSGNTFFYFLTSFVGLIVIPATYYLWPRD----QNAEQIRLKNIRKVYGRCMWYRLRLLKPQPNIIPTVKKIVLLAGWALFLFLAYKVSKTDREYQEYNPYEVLNLDPGATVAEIKKQYRLLSLKYHPDKGGDEVMFMRIAKAYAALTDEESRKNWEEFGNPDGPQATSFGIALPAWIVDQKNSILVLLVYGLAFMVILPVVVGSWWYRSIRYSGDQILIRTTQIYTYFVYKTRNMDMKRLIMVLAGASEFDPQYNKDATSRPTDNILIPQLIREIGSINLKKNEPPLTCPYSLKARVLLLSHLARMKIP-ETLEEDQQFMLKKCPALLQEMVNVICQLIVMARNREEREFRAPTLASLENCMKLSQMAVQGLQQFKSP--------------LLQ-----------LPHIEEDNLRRVSNHKKYKIKTIQDLVSLKESDRHTLLHFLEDEKYEEVMAVLGSFPYVTMDIKSQVLDDEDSNNITVGSLVTVLVKLTRQTMAEVFEKEQSICAAEEQPAEDGQGETNKNRTKGGWQQ 515

HSP 2 Score: 110.538 bits (275), Expect = 1.008e-24
Identity = 55/116 (47.41%), Postives = 78/116 (67.24%), Query Frame = 3 
Query: 1917 RDDGADDEWSSIKDDMMQPDR-LLDAKSKESHIVHCPYYPMEKHEYWWVYLINKKNNQLVTAPQQVTNLKVTEKVQLKFSAPEKPGIYQYIVVVKSDSYVDFDMTKPLKVAVSEAK 2261
            +DD A  EW  ++  + + +R LL+ KSK +H V+  Y+P EK E+WW+Y+ ++K   L++ P  V  LK TE+V+LKF AP KPG YQY V ++SDSY+  D  KPLK+ V EAK
Sbjct:  607 KDDEA--EWQELQQSIQRKERALLETKSKITHPVYSLYFPEEKQEWWWLYIADRKEQTLISMPYHVCTLKDTEEVELKFPAPGKPGNYQYTVFLRSDSYMGLDQIKPLKLEVHEAK 720
The following BLAST results are available for this feature:
BLAST of TCONS_00071461 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SEC633.031e-15545.69Translocation protein SEC63 homolog OS=Homo sapien... [more]
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