TCONS_00071374 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071374
Unique NameTCONS_00071374
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length193

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071374 ID=TCONS_00071374|Name=TCONS_00071374|organism=Clytia hemisphaerica|type=transcript|length=193bp
TACCTGGTAAAAATCGGGTTGCTTGGTGACGACATGCGACATGAAGGCTT
CTTCTTCATCTCcgtataagaaatatttttgaagtttATTGTATTCTGCA
TATTGTGGTGATTCGAAACGTTCCATTCTCCAAACTTCGTCAATGTGAAA
TTGAATGCTTGCCAGACACGTGTTCGAAGTCTTGGCTCCTGAA
Run BLAST on NCBI

transcript from alignment at scaffold_60:864134..864410-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071374 ID=TCONS_00071374|Name=TCONS_00071374|organism=Clytia hemisphaerica|type=transcript|length=277bp|location=Sequence derived from alignment at scaffold_60:864134..864410- (Clytia hemisphaerica)
TACCTGGTAAAAATCGGGTTGCTTGGTGACGACATGCGACATGAAGGCTT
CTTCTTCATCTCCGTATAAGAAATATTTTTGAAGTTTATTGTATTCTGNG
GGTTGTTTGGTGACGACATGTGACATGAAGGCTTCTTCTTCATCTCCGTA
TAAGAAATATTTTTGAAGTTTATTGTATTCTGCATATTGTGGTGATTCGA
AACGTTCCATTCTCCAAACTTCGTCAATGTGAAATTGAATGCTTGCCAGA
CACGTGTTCGAAGTCTTGGCTCCTGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044352XLOC_044352Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071374-exon-scaffold_60-1575043694:864365..864410TCONS_00071374-exon-scaffold_60-1575043694:864365..864410Clytia hemisphaericaexon
TCONS_00071374-exon-scaffold_60-1575043694:864134..864280TCONS_00071374-exon-scaffold_60-1575043694:864134..864280Clytia hemisphaericaexon
TCONS_00071374-exon-scaffold_60-1510915933:864365..864410TCONS_00071374-exon-scaffold_60-1510915933:864365..864410Clytia hemisphaericaexon
TCONS_00071374-exon-scaffold_60-1510915933:864134..864280TCONS_00071374-exon-scaffold_60-1510915933:864134..864280Clytia hemisphaericaexon
TCONS_00071374-exon-scaffold_60-1491911889:864365..864410TCONS_00071374-exon-scaffold_60-1491911889:864365..864410Clytia hemisphaericaexon
TCONS_00071374-exon-scaffold_60-1491911889:864134..864280TCONS_00071374-exon-scaffold_60-1491911889:864134..864280Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:864134..864410 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071374 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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