TCONS_00071346 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071346
Unique NameTCONS_00071346
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1771

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071346 ID=TCONS_00071346|Name=TCONS_00071346|organism=Clytia hemisphaerica|type=transcript|length=1771bp
GGTTAACGCCCTGTTACAGTGTGGGGAATTCTTGGAATTTTAAATACTTT
CGCTTTCGATTGCTATCGTACTGACCTCTGCCGCTCGCTCCTTTCACCGA
CAGGAACAGCATTTATTTgcatttcaattttcaaatcaaagctCACACCT
CCATCTCCACCCCAATAATAAAAAAAGATCAAAAAAAGATGGCTGCTGAT
AATTTATCTTGTGTTTTGTATGGAATTGATGATATGAGGATTGAGTCAAG
ACCAACTCCCGAACCTGGACCGAATCAGGTACTGTTATCAATGCATTCAG
TGGGAATTTGTGGATCAGATGTACATTACTGGAAGCATGGTCGTATTGGT
GACTTTGTGGTTAATGCACCTATGGTGTTGGGACACGAGGCTAGTGGTAT
TGTTGTCGAAACTGGAGAGGGAGTGGAGCATTTGAAAAAAGGAGATCGCG
TAGCAATTGAACCTGGAGTACCATGCAGAATGTGTGATTGTTGTAAAACT
GGTTCATACAATTTATGTCCAAAGATGGAATTTTGTGCAACGCCACCTAT
CGATGGGAGTCTTTGTCGTTATTATGTTCATGCTGCTGATTTCTGCTACA
AATTACCTGACCACGTGTCATGTGAAGAAGGTGCATTGTTGGAACCTCTA
TCAGTCGCTGTCAACGCATGCAAACGAGCACAAGTCAAAATGGGGGATCA
TATATTGGTCTGTGGCGCAGGACCAATCGGTTTGGTATCGTTATTGGTTG
CAAAAGCATGCGGTGCTACACAAGTTTGTATTACTGATCTAGACGAGAAT
CGATTGAAAGTAGCGAAAGAGCTGGGTGCAGACATGACATTCAAAATAAC
GTCACGTGATGGACGAGAAGTAGCTGAAcaagtgaagaaaaaattcgGTC
GAATCGATAAAACAATCGAATGTAGTGGAGCTGAATCGAGTGTCCATACT
GCTATCTATGCTACAGCATCCGGAGGGATTGCAATGTTGGTTGGCATGGG
CAAAGCAGAAATTAATTTCCCAATTTTCGAAGCATTAGCGCGGGAAATTG
ACGTCAGAGGGAATTTCAGATACGTCAATTGCTATCCAACAGCTTTGGAT
CTTGTAGCTTCTGGTAAAGTCAACGTCAAACCACTAATCACTCATCGTTT
CAAACTTGAAGAATCTCATAAAGCATTCACCACCAGTAGCTCTCCTGGAT
GTAATACAATCAAAGTCATGATTTCTTGTCATGAAGAGTAACTGGAGAAA
GAGAGACTAGGAAACTAGCCTACCCCGTCTGGTAtgttctgttttgtttt
ttatccaTCGACGAAAATCTACTATTGCCGTTTTTGTAGCActtctcttt
tttataaaattttgattgatgTAAATCATCTTTTCACCCCCTTCTCTTTT
ATAACTTTTTCGATAATCTTCAAATTAGGtgattgtaaatttttttgcat
ctttttttatttaaaatttgctttcgatatttattatttattttgtcata
attatattttatttctgATGATGTCAAATAATactgtattttctttttct
tctaatAATCTTCAAGTAGAAAAGAGAAAACTATTCTAACATACAACTTT
CTTTACATCTACTGTAAATCGAATAGTGGTGAAGATTCCATTCGATGCCT
GAAAAATGTGGTTTGATTTCAtgtaaggcaaaaataaaaaatgtagtgtt
tcggaatgcgggtgaaggaaaaagctctcatgcgggcggccggaaatttt
tttttactaccttaagggaag
Run BLAST on NCBI

transcript from alignment at scaffold_60:418778..431569-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071346 ID=TCONS_00071346|Name=TCONS_00071346|organism=Clytia hemisphaerica|type=transcript|length=12792bp|location=Sequence derived from alignment at scaffold_60:418778..431569- (Clytia hemisphaerica)
GGTTAACGCCCTGTTACAGTGTGGGGAATTCTTGGAATTTTAAATACTTT
CGCTTTCGATTGCTATCGTACTGACCTCTGCCGCTCGCTCCTTTCACCGA
CAGGAACAGCATTTATTTGCATTTCAATTTTCAAATCAAAGCTCACACCT
CCATCTCCACCCCAATAATAAAAAAAGGTAAGTAAGAGTACTAAAAAGGC
AAAAGGTATTTGCTTCTCATTCTTATACTGGTTAACCAAGCTCTAAATTT
CTTTTATTTTAAACTGCCTTTTAGTTTGCATCTTTCCAATTTTCATTCAA
ATTGATTATAATAATAAGTAATAACACCGTGAGATCGAGATTGGGTAACT
TGCATCAGTGGAGACTAACATGCATAGCCCTCAACTGAATGACCTGGCTG
GTCATTAAAATGCAAAGTTAAATCAAAACAAAAAAAAATGGTAGAGTAGA
GCTGCGAGAGATTTCGCTAAATGCACAGAGCGCGCAGAACAATTTTTTTC
CCCGATAATTTTTCCTATCTGTCATTCCGTGATTCAGGGGGTATTGGGAG
GTAGGGTCAGGGTTGCTAGTAACGGCTTGTCACTGTTCCGGGTGCATACT
CGGCGCCTTGGGCCCCGCAGGGTTGCAAGTAACGGCTCGAATCTCAGTCA
GGTTTAAAAAAGGGGTACTTTTACCCATATTATAATAACATTACCCCCGT
CTTTTGCCAGTTCGGTATAATGTGTTATGAATTGCGGGGTTTTGCTGTGC
GGCGATGGCTCAACGGATAGAACGCTGGCTTCCGAATCTGAAGGTCTTTC
TTTGGTGGTGGTTCGAATCCCACTTGGTGCGAAAATTAGACTGGTCGAAA
TTGATGGACAAATGATTGACAGGTATGAAAACTCAGTCAGAAATGAGAAA
CTAAGANTAGACTGGTCGAAATTGATGGACAAATGATTGACAGGTATGAA
AACTCAGTCAGAAATGAAAAAGTAAGTCTCAGAAAGTAGAATAAACAGGT
AAGGTGAAAGATAGGAAAGGGAAAATGGGCCGTCGCGCTCTGTGCATTTA
GCGAAATGCCTGCGAGCGGAGCTGCATAGATCATTGTTTTGAAATTTTGC
TGCTTTGATTGGTCAGCCATTTGATGGCTATGCCAGTGGAGGGAAACTTG
CATAGCCATCAAATAATTGGACCGACCAATCAAATCAGTCCCATGTTGCG
ACCACTCGTCCCAAGTTGGAGCAGTTGACGGTACCGTGACATTGTGGTGG
GTAACTGAAATTTTGATGAGGTCAGCAAAAATTGGTAAAAAACGAAAAAA
CCCTATTTTTCGCGAAAATAGACCTTATCAGAGTTTTTGATTTTTCTAAA
AAAGCGATACATTGTGGGATTGTTTCGAGTGTATTACAATAGAAATCTCT
TAGGAATTCCTCAATGGAATTCTATTGTAATACAGTCAAAACAATCCCAC
AATGCATCGCTTTTTTAGAAAAATCAAAAACTCCGATAAGGTCTATTACA
GCCTAGACTAATGTTAAATTTTCTTTCAGAAAAAAGACTATAATTTGTTT
ACCTTTATCCTTGCAGCTTCCCAACATCCAAGCTCTCAAACATCACAAGC
CAAATGAAATTACTTTCGATTTCCCGTAGAAATTATGCGATGAAAAATCC
GGGGATCAATAAATGAAGACTTTCTTTTCCGCACAAGTTATCATTCCTTA
TAACGAATTATTACTTTTCAATATAATTGTTGAATATAATTTTTGATTAC
AAAAATATTTTACATTGTATTTTAAGTTCGAAAAAGTCGATTCTACTTAG
TTCTTCGTTTTCATGTCTAACCCCCGTCTCAAAAGAAGTCCCAGAATCCC
GAGATTTTGGCAGTCGGGCGTTCAAAACAAAGGCGTTTTTATTTTCCGCC
CACTTACGANTATGAGGTTATCGAGACAAAATGTGACGAATTTGCGCGGA
AAGGAAATTTAACATTAGTCTAGGCTGTATTAGGTTATACACATCAGGTT
AGAAACTTCATCATAGTACCCTTCATGTTCAGTCATTTGTTTGGTCATTT
TCTGTTGGCTAATGGGATCTAAAAATTATGGTAGTTTTAAGACATGCCAT
AACTTACNGTTAAAAATACTAGTATAGAACCCTATTTTCTACCATATAGT
TCTTCTTCCAAAACGAAATACACTAGAGAAATAAAGAAATTACGAGTGTT
ATCAAGCCACCCAAAATGAACTTTCATTCGTCGTGCGTCATTGGATTGTT
TACGTCACGATCTATTGTCAACCATTGTCCAATCCCGTAAGCGATTGAAA
TGCCGTCAGTAATAATCTGAGAAAGANCTGCTGCACGAGAAAGTTTTTGC
CTCACCCGCATTCCGGAAACAAAACACTATTTTACTTTGGTCATTTTTTT
CATGAAATATTTCAGAAATTTGGGGTTGATTGCTTTATAGATTTGAAGTT
ATTGCCATTTTTCAATAATGACGTCTTTGAATCTTGCCTATGACATCTTT
TTTTGACAAAATTCATAACGTCAAAATCAGTTTTGGGTCGATATCTTGAA
ATTGGCTTAATTTAAATTTTTGACCCCGCACTTTCCGTAACCATCTTGCT
AATACCCTTCTTTTGAGCTATAATTGAGAGTTAAGTAACAATGGGAAGCG
GTGGGAAAATTGGGAATTAAATTTTTTAAATTGGGTTTAAACTTGCCTTA
ACTCACCTGAGAAAACTTAAAATTTGGAATATCTCAAAAACCAATGATCA
AAATAGGATGAAATTTTCATGTTTATTACTATATGAGGAAGCAATTCACG
ATAAAAGGTTTTTGAAAAACGATATGTCCTCATTTTTTATGCCACAATAG
ACTTTTGCTAATTTCTACTGACAACGTCCCTGTTTAGAAAACCAACTTTT
CTTTATACCTAATATACCTTACAATCTAGTTTTCATATTTAGAGAAACTA
GATTTCGGCATGACTGATCCTTTTGTTTCGATAATAACATCAAAGTGGGA
ATTAATTTTCTTTCCTTTTTTTCTTATCAGTTCACCCTTTCTCTCATTAC
TTTCAAAGCGTGGTTAAGCTCAAGCGGTTAGATCGTCTGTCTCATATGCA
TGGGGCTCTGAGTTCGATTCCAATGGGTGTTCAATTTTTTCAATTCGTGA
TTTTGTTTTTGTGATTCCCTCATCACTTTAATTTTGTATCACATTTTCAT
TAGAGTGAAGAGATATCGACGCGTTAGGCTGGGCTTAAAATATTGTTGGT
TTGCCGTCACCCGACCCTAGATTTTGGAGGTGGGACGGTCGGTCGAAATC
TCTTTTTTATTTTGGCGATTTATGAAATTTCCGTCCATGGAAGGGTTAAC
AGTTTGTTTACATTTAGGTAATTTTGAATGAAAAACAGAAGTGCTAGCAG
GGAATTTACGATTCTTATGCTTGAGACAAACAAAATACGAGTTTTGATTT
TTTATTGTTTGAAGTTTTTGAAGGAAAAAAAAATGGCAATAATATTTTTT
GGGTCGGCAGGTTTCGAGGTAGGGTCGGTTTTTTAAGTCCAGCCTTATGT
AATGTTAATTGCTATTAGTAATTACGCGTTCAATTCGAATTTATGATCTG
TTCCCTCCTAGTGAGAAGTTTAATACCCTTATAACAACCGTATTTTATAA
GCATTGAATACTGAAATTCAAATAATGACCACAAGAAAGATGAGCAAACG
ATTGGATCAAGTGTCAAACATTTTGACCCGGAAAATCAATTATTATTGTG
CTTTTAAAGTATAAAACGAGAAGTTCAATGATTCTGAAAGAAGTTATATG
ACGATTCTCTTACAAAGAATCGCTCGCTCACTCGCTGGCTGAAAGTGAAA
GTAAAAGTAGTGAAAATGAAAGTGAAACTGTCAGTCAGCAAATGCAGGCG
CAAACGCCTATACCCATTCTTCTATATCTCAGCCTTGAATAATCGCTTTT
GGCAAAAAAAAGAAACAAAAAATTAAAAAAGTTCTTATTAAGTGATGCTA
TCATAGCTTATCTAAACCTTAGACAGAGAGCGGAGGTAATATATGCTAGC
TACTTGTTTGATGGACCTTCATTATAAAAGAAGGAGAATTAAAAAAAGAA
AATTGAAGAATTGAAGAATTGAAAAATTGGACATCCATTGGAATCGAACT
CGGAGCCCCATGCATATGAGACAGACGATCTAATCGCTTGAGCTAACCAC
GCTTTGGAAGTAGTGAGGGAAAGCGTGAACTGATAAGAAAGAAAAAGGAA
ATAAAGAAACGAGAAGAAAATTAATTCCCGCTTTGATGTTATTATCGAAA
CAAAAGGATCAGTCATGCCTAAATTCCTTTCCACACGTCAGCAATCTAGT
TTCTATAAATTATATGAAAACTAGATTGTAAGGTATATTCTAAAAAAGAA
AATTTGGTTTTCTAAACAGGGACGTTTGACATTATCAGAAAAAAAATTGG
AAATCACCACTACTGTCATTGGGCAAAATTTCAATGTCTTTTGATTAGTA
CTTTTTGAGATAGTCAAATTTTAATTTTAATTTTTATGGATGTCATAAGT
TACAAGGTCATAAAACACAATTTTCTCAAAACGGACAAAAAATTAATCTT
ATTAACACTTAACAGGTATTGTAAGTCTACATCCTAAAACGCTTCTTTTG
ACGTGTAAATGTCCATGCAAAAGTTGCCCCTAGTTTTCTGGTGCTTTCTA
ATTCTTATATTTTTTCAGATCAAAAAAAGATGGCTGCTGATAATTTATCT
TGTGTTTTGTATGGAATTGATGATATGAGGATTGTGAGTAAAAAAATTAA
TTATTTAAAAAGCAAATTATAACACCATTTTACTTGTTTTTGAAAAACCT
CAAGGATAAAAATAAATTTTGGGGGATAGAAATATTTGGCCTAAAATCCA
CAAAATTAAGTTCCTGCCAAAATTTCTTTTTCTGTAGTCAACAAAATTAA
ATTCTCGCTAGATGTGTTTTATTTATTTATTTTCCTAATTTGTGCTTTTT
CAAGGTTTCTAAACAGTTTTTTCTTTACAGCGACAATTTTTGGCCAATAA
TATTCTTCAACCACCAAATTAAATTCCCACCCACCTAACAATTTATTCCT
TTAAGGCAGTTACCATGATGTATATTTGTTATTTTATTTCGACTTGCTAA
AATGGATTTTTTTTGGTATATGATATATGAAAAAATCTAAAAAAAAAATT
CTACTTTAAAATAATCTTATTTACTTTTATTTTTTTTTCAAATTATGTGC
ATCTAGGAGTCAAGACCAACTCCCGAACCTGGACCGAATCGTAAGTATTG
AAAGTGATATTTGTTCAATTCAAAAGTACTTAAACCAAGAAATATGTCTC
CAAGCCCTCCAAATAAACAAAAATAAGTCTTAACAAAGAATCGAAAATTT
AAAAAAGAAAGCGATCTCTATCCAACAATATTTTGACTCATTTGAAGTCG
CCATTTCGAGGCTTTGAAAACAGTGTTGTGTAAACTAGATAGGCAAAATC
ATCTTACCCTTATTTTACTATTCCATAGCAAATCTATATTTCTAAAGTTT
AAACTTAATAAATATCAATCGTAAAATAATAAAGTAAAATCATTTAAAAA
ATAACAACATCAGTACATGATGCAAGTGAAATCGGTTTTAATATTTAACA
ACTTTGGCATTACATTTTACTTAAATTTGTAAAACTATTTTCATCATGAA
TTAATGAATTGATTCGGGTCTTCCTATTTTTTTAGTTACAGATAGTCTTA
CTTCAATAATAAGCCAATGACAAAGGGCTTTTAAGTCCATTAGTACCTGG
TGACCTCTATGTGGATAACAATTATTTTGGTTAGTTAAAAGTTTTTTGAG
AAATAATTGAGCTTTTCATCCGAAAATTTCCGGAAAAAGAGCATAAAAAC
GCTGATTTTTAGCTTTTGAAAAAGAATAAAAATATATATCTAATTTTCAA
TTTTAGTTTTAGTTAAAACAAACTCATCGAAAGCGTCATTTTGGCATAAT
ATAATACATAGGGGTGTCCCATGTGGAAGGTACCAAGGTAATAAAAGGTT
TAGTCTTTTAGTTAGCGTATAATTTTCTTACATATTTCAGAGGTACTGTT
ATCAATGCATTCAGTGGGAATTTGTGGATCAGATGTACATTACTGGAAGC
ATGGTCGTATTGGTGACTTTGTGGTTAATGCACCTATGGTGTTGGGACAC
GAGGCTAGTGGTATTGTTGTCGAAACTGGAGAGGGAGTGGAGCATTTGAA
AAAAGGTAAACCTAGTGGTCGACTAATCTTGGAATCAATCAATACTCCAT
TCTCAATAATGAACTATTTTAGGAAATTCTATTAATATCAATGTTTTAAG
GAAAAGATTAAGCAATGAAGGCTTGTAATGATGTCATCATGTCTGTGTAG
AAACCACCTGACCTATAATGACGGTACCTGCTTTTTGTAATCACCTTACA
AGCGTTGACTTTTTTTTTAGCCTGCTCGTCGATGCAAATTTTTTTTCCGT
AGACGGGCGGAAATATCTTTAATGGTCGGAAATATCATAGCGTAATGGTC
GGAAATATCATTTGATGGTCGGAAATATCTTTTGATNTAATGGTCGGAAA
TATCATTTGATGGTCGGAAATATCCAAAATTCTGAAAATTTGAAAATTTA
ATGGTCAGAAATATCATTTGATGGTTGGAAATATCATTTGATGGTCGGAA
ATATCTTTTGATGGTCGGAAATATCATTTGATGGCCGGAAATATCTTTTG
ATGGTCGGAAATATCATTTGATGGTCGGAAATATCTTTTGATGGTCGGAA
AAATTTGAAAATTAATGGTCGGAAATATCCCGCGCTTTTAAAAATGCTTC
ATCAGCAAAAAAATGTAAACAAAGATGGTAGCAAAGGTGGTGTTGTGTGG
CCAACTTGTTGTGTGTGCCAGACAAGCTTTTTAGGTAGAGAAAGTGGTAT
TGAACTTTTTATTCAAACACGACTCTTCGTTCTTTCTTGTCTTTTTTATA
TCCTTTCCTCCTCTGGCCCCCACTGTAAGGGTCAATTGTTGGCCAAATTT
TCACTGCATGCACTGCCAGCTGGATGCACTGTACGTGTTTGATTTTGGAA
GCCAAATTTTCNTGAAAATCGTCTTTATTCATAATGTAGGAGATCGCGTA
GCAATTGAACCTGGAGTACCATGCAGAATGTGTGATTGTTGTAAAACTGG
TTCATACAATTTATGTCCAAAGATGGAATTTTGTGCAACGCCACCTATCG
ATGGGAGTCTTTGTCGTTATTATGTTCATGCTGCTGATTTCTGCTACAAG
TACGTTGCTTATTTTCCTTATTATGTAAAATGAATAGGAATTAAGGAAGG
GAGATTTTTTTTTTGAAAACGCAAAGTAAAGATTCATATTGTAAACTTCA
AAATTCAAACATCGGGTTTTTCATTTTGCCAGTAACTTAAATTCAGATCA
TGAATTATGGTAGGATTATATATTAAAGTCATTTCAAGCAGCATTATTCN
GAAAACGCAAAGTAAAGAGTCATATTGTAAACTTCAAAATTCAAACATCG
GGTTTTTCATTTTGCCAGTAACTTAAATTCAGATCATGAATTATGGTAGG
ATTATATATTAAAGTCATTTCAAGCAGCATTATTCTCTCTCAAATTTATT
CATTCTGAATCAAACCTTTATTCTTGATTGAGCTTGATTCTTTACCTATC
ATCATCAGGACAAATAAACATTGAGAACAATGATAAAACAATGAAAATGC
TTGATAACTTTTGATAATTCTAAAGTTTTGAGAAAAACTATTCTCCTACA
AAAAACATAAGAAATTTTTCTTGTTACGTACTCTGCAGATTACCTGACCA
CGTGTCATGTGAAGAAGGTGCATTGTTGGAACCTCTATNAATTTTTGTTT
ACATTTTTTTGCTGATGAAGCATTTTTAAAAGCGCGGGATATTTCCGACC
ATCAAATTTTCAAATTTTTAGAGCTTTGGATATTTCCGACCATCAAATGA
TAATTCCGACCATCAAAAGATATTTCCGACCATCAAATTTTCAAATTTTC
AGAGTTTTGGATATTTCCGACCATCAAATGATATTTCCGACCATTACGCT
ATGATATTTCCGACCATTAAAGATATCTCCGCCCGTCTACGGAAAAAAAT
TTGCCTCGTCAACATACGTACATAATGACATCAAAGTCAACAGTTGAGAG
TTTAAAACCAAAGAACTGCGAATGAAGATTTTTAGTTTAAAATCTACTAA
ATTTCTTGACTTAATTAATCTATCTGTTCGATTGTGATCATAATGTAGGA
GATCGCGTAGCAATTGAACCTGGAGTACCATGCAGAATGTGTGATTGTTG
TAAAACTGGTTCATACAATTTATGTCCAAAGATGGAATTTTGTGCAACGC
CACCTATCGATGGGAGTCTTTGTCGTTATTATGTTCATGCTGCTGATTTC
TGCTACAAGTACGTTGCTTATTTTCCTTATTATGTAAAATGAATAGGAAT
TAAGGAAGGGAGATTTTTTTTTTGAAAACGCAAAGTAAAGATTCATATTG
TAAACTTCAAAATTCAAACATCGGGTTTTTCATTTTGCCAGTAACTTAAA
TTCAGATCATGAATTATGGTAGGATTATATATTAAAGTCATTTCAAGCAG
CATTATTCTCTCTCAAATTTATTCATTCTGAATCAAACCTTTATTCTTGA
TTGAGCTTGATTCTTTACCTATCATCATCAGGACAAATAAACATTGAAAA
CAATGATAACACAATGAAAATGCTTGATAACTTTTGATAAATTTCCGTAA
GTTTTGAGAAAAACTATTCTCCTACAATGTACAAAAAACATAAGAAATTT
TTCTTGTTACGTACTCTGCAGATTACCTGACCACGTGTCATGTGAAGAAG
GTGCATTGTTGGAACCTCTATCAGTCGCTGTCAACGCATGCAAACGAGCA
CAAGTCAAAATGGGGGATCATATATTGGTCTGTGGCGCAGGTTAATAATG
TTTCTTGTTATTATCTTTTGTTTTGGCCTTCATTTTGAATCGCGAACAAC
GATTCAATGATAGGCAGATCGAAATCACATAATTTTTAAAAAGTCACAAA
ATCTTTAAAAAGGATATACTTTAATGGGATGAATTTTCGCGGGGATTAAT
TTTCGCGGATTTCGCGAATTTGGGTGTCATCCGCGAAAATAAGTCCCATT
GGAAATTTGGAAAAGGCCCATCCGCGAAAATTAGTTTCAGCGAAAAAATT
GAATTTTTTTTGCAATCCGCGAAATTTCTATTTTTATCAACTTTTGATAG
TTGTAATACATATCTCCTCGCCCTATTCCAAAACACTCTCTTATTACTTG
AAAAAAAAATTCTTAATTTTTCTGGAAAGTTTTTATTTCAATGTTTTGAC
CCCAATCCGCGAAATTAAATCCCCGCGAAAAATCAGGAAATCCCTCATCC
GCGAAAATTAATCCCCGCGAAATCTTAAAATTTCGCGGATGAGTTCAACC
GCGAAATTTAATCCCCGCGAAAATTTATCCCGGATAAACCTGGAACTGCT
AACTGTGATAAAATATCCCCTAGATAAGATACGTTTTAAAACATAATTCT
TTATTTATAGGACCAATCGGTTTGGTATCGTTATTGGTTGCAAAAGCATG
CGGTGCTACACAAGTTTGTATTACTGGTACGTCCGATTTCATTGTCATCC
ACATCCTTTAAAAATCTAGTGAAATGTACAAATAGGAAATGTTTTTTTAG
ATACAAGTTGAGCTATTATAAATAATATGGGGTTCTGAGATTACGGTATT
GACCGGTTTTCGGGTGTTGAAAGGCCGAATTTCTGGTACTTGTCAGAATA
TTTTTGACTGGTATTTGAGAGCCTTTTTGCTGGTATGTTGGTATTTCATG
AGAAAATGATTTTCGATATTTTGTAACCTAGGATGCCACCCATAATAATG
TTTGACAAAAACGGGGTACCCATCATAGTCGAACAAAACAGCAACGTGCA
AAAATATCTTATAGGGGTTCATTTAACCACTCCGTCTTCGTCGTATTGTT
TTAAATGTACCAGAATGTTGGCTGATAGATAATGTTTAAATTTATATTAA
GCAGATATTCAAACATTTTCACGTTGAATATTAGTAGGGGGTCATTCTTT
AGGACCCGTGACAACAATTTCCGGAGTGGAATTTTTTTTGCTCATTCGAA
AGAAGAATGTATTTAGAAACTTTTTTGAGAGGGAGTAAATTAATTAGATC
CAGCAATTTTTTTTATGGGGAAAAGACTTGACGTCACAAGCAAAAACCCT
TGGGACCCGAAACTTGACGAAATTACCTTTTGCTACGTTTCGAGATATTC
TTCTTTCATTATCGATCTTCTCTAATAATGGTTGGTCAATTATGTTTTAC
CATAGATCTAGACGAGAATCGATTGAAAGTAGCGAAAGAGCTGGGTGCAG
ACATGACATTCAAAATAACGTCACGTGATGGACGAGAAGTAGCTGAACAA
GTGAAGAAAAAATTCGGTCGAATCGATAAAACAATCGAATGTAGTGGAGC
TGAATCGAGTGTCCATACTGCTATCTATGTGAGTAAAAATCTTTTGTACA
CTACTATCTAATATCAAAACGTCAAGATTTTTATCATTTTGAAATGTTTA
TTGAAAAACTAAACGTGAAAAACTCTAAAAAGACGTAAAGAATATTTCTT
TTTGGCGATTAACTTTTTTTGTGTTTGCGACAGAGACGGAAAGTTTCTGA
TTTGTCTAGATCATGATTGACTGAGGACGACGGTAAATCAGCACTTTTAT
CGTCCTTGATTTGCAGATTAAAACTGTGGGTTATTTTAAATCGCTTCACT
CCGCCTAAAAAGTGAAAATACATAAGATTGCTATTGATTCCCCAATCGAA
ACTACCAGCAGCCGAGAAGACCGTTCTTCACTATGCGAAGTTATGTTTTT
CGTTAGTCCCTTCACTTCAATTCAAAAACTTTTTTCTTGAAATTTACAGG
CTACAGCATCCGGAGGGATTGCAATGTTGGTTGGCATGGGCAAAGCAGAA
ATTAATTTCCCAATTTTCGAAGCATTAGCGCGGGAAATTGACGTCAGAGG
GAATTTCAGATACGTCAATTGGTAAGAAAAGATATTTATTTGACGGAAAA
CTGTTACTACCAGGTTTTTTTCCAATTTAAATTGTCTTTTTGACGTGTTT
TTTCGATGTATTTTATAACGTCAAAATTAGTTTTTGGCCGATATCTTGAG
ATTGGCTTGATGTAAATTTTTGAGATNTTTTTCGATGTATTTTATAACGT
CAAAATTAGTTTTTGGCCGATATCTTGAGATTGGCTTGATGTAAATTTTT
GACCCAGCATTTTTCGAAATCCTCTCGTTGATACAATTCTTTTGAGCTAT
ATATGAAAGTTAATGAATAATGGGAAGCGGTGTGCGTCAGGCAAAATATA
TTTGGGACATGCCTTGTTTCACCCAAGCAAATGAGAGAAGTAATAATCAT
GACGTTTGCACGACGAAGCGCTATTGAGAAATTAAATGTTGAGAAATCTT
TGTTTGATTTAATTTGAGATGCTTAAAATTCCACACTAGAGGGTGTAAAA
TTTTTAAAGAAACTATTTGTAAAGGGGGCGTCCGGGAGTCGCAGACACCG
AAATGCCGACGTATTTTCCTTGGGTCACCGTCGACACCGACATCAAGAAC
TGCTAAAGTCCTTATTTTGTTACCACGTGGTATCTTTGACACGAAAACAC
CGTCACTTTTTTCTTCAAACACTAAAACACCGACGGAAAAGGACTAATAC
CGTCACCCCGTCAAACCCGTGCGCTCCCTCCCATTTGTAAATTAATTGTA
TTGGTTCTGGTTTCAATGATTTTTAGATATCGGAATTTGATTCGATGTTA
TACAGTTGACGCTCTCTAATTCGATCTTCAAGGGGAATTGGATTTTCATC
GAATAAGGGAGCTTATCAAATAAGGGAGCGTCGTTTATGAGAGTTTCTTG
TTGACGGGGACTTTAAATTTCATCGGATAAGGGAGCCTATCGAATAGTAG
AACGTCGAATTAAAGAGCGTCAACTGTATGTATTTATTTTTACAATCTCT
AGCTATCCAACAGCTTTGGATCTTGTAGCTTCTGGTAAAGTCAACGTCAA
ACCACTAATCACTCATCGTTTCAAACTTGAAGAATCTCATAAAGCATTCA
CCACCAGTAGCTCTCCTGGATGTAATACAATCAAAGTCATGATTTCTTGT
CATGAAGAGTAACTGGAGAAAGAGAGACTAGGAAACTAGCCTACCCCGTC
TGGTATGTTCTGTTTTGTTTTTTATCCATCGACGAAAATCTACTATTGCC
GTTTTTGTAGCACTTCTCTTTTTTATAAAATTTTGATTGATGTAAATCAT
CTTTTCACCCCCTTCTCTTTTATAACTTTTTCGATAATCTTCAAATTAGG
TGATTGTAAATTTTTTTGCATCTTTTTTTATTTAAAATTTGCTTTCGATA
TTTATTATTTATTTTGTCATAATTATATTTTATTTCTGATGATGTCAAAT
AATACTGTATTTTCTTTTTCTTCTAATAATCTTCAAGTAGAAAAGAGAAA
ACTATTCTAACATACAACTTTCTTTACATCTACTGTAAATCGAATAGTGG
TGAAGATTCCATTCGATGCCTGAAAAATGTGGTTTGATTTCATGTAAGGC
AAAAATAAAAAATGTAGTGTTTCGGAATGCGGGTGAAGGAAAAAGCTCTC
ATGCGGGCGGCCGGAAATTTTTTTTTACTACCTTAAGGGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044338XLOC_044338Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071346-exon-scaffold_60-1575043694:431393..431569TCONS_00071346-exon-scaffold_60-1575043694:431393..431569Clytia hemisphaericaexon
TCONS_00071346-exon-scaffold_60-1575043694:426787..426851TCONS_00071346-exon-scaffold_60-1575043694:426787..426851Clytia hemisphaericaexon
TCONS_00071346-exon-scaffold_60-1575043694:426280..426313TCONS_00071346-exon-scaffold_60-1575043694:426280..426313Clytia hemisphaericaexon
TCONS_00071346-exon-scaffold_60-1575043694:425315..425479TCONS_00071346-exon-scaffold_60-1575043694:425315..425479Clytia hemisphaericaexon
TCONS_00071346-exon-scaffold_60-1575043694:424271..424430TCONS_00071346-exon-scaffold_60-1575043694:424271..424430Clytia hemisphaericaexon
TCONS_00071346-exon-scaffold_60-1575043694:422580..422698TCONS_00071346-exon-scaffold_60-1575043694:422580..422698Clytia hemisphaericaexon
TCONS_00071346-exon-scaffold_60-1575043694:421894..421959TCONS_00071346-exon-scaffold_60-1575043694:421894..421959Clytia hemisphaericaexon
TCONS_00071346-exon-scaffold_60-1575043694:420992..421164TCONS_00071346-exon-scaffold_60-1575043694:420992..421164Clytia hemisphaericaexon
TCONS_00071346-exon-scaffold_60-1575043694:420449..420570TCONS_00071346-exon-scaffold_60-1575043694:420449..420570Clytia hemisphaericaexon
TCONS_00071346-exon-scaffold_60-1575043694:418778..419467TCONS_00071346-exon-scaffold_60-1575043694:418778..419467Clytia hemisphaericaexon
TCONS_00071346-exon-scaffold_60-1510915933:431393..431569TCONS_00071346-exon-scaffold_60-1510915933:431393..431569Clytia hemisphaericaexon
TCONS_00071346-exon-scaffold_60-1510915933:426787..426851TCONS_00071346-exon-scaffold_60-1510915933:426787..426851Clytia hemisphaericaexon
TCONS_00071346-exon-scaffold_60-1510915933:426280..426313TCONS_00071346-exon-scaffold_60-1510915933:426280..426313Clytia hemisphaericaexon
TCONS_00071346-exon-scaffold_60-1510915933:425315..425479TCONS_00071346-exon-scaffold_60-1510915933:425315..425479Clytia hemisphaericaexon
TCONS_00071346-exon-scaffold_60-1510915933:424271..424430TCONS_00071346-exon-scaffold_60-1510915933:424271..424430Clytia hemisphaericaexon
TCONS_00071346-exon-scaffold_60-1510915933:422580..422698TCONS_00071346-exon-scaffold_60-1510915933:422580..422698Clytia hemisphaericaexon
TCONS_00071346-exon-scaffold_60-1510915933:421894..421959TCONS_00071346-exon-scaffold_60-1510915933:421894..421959Clytia hemisphaericaexon
TCONS_00071346-exon-scaffold_60-1510915933:420992..421164TCONS_00071346-exon-scaffold_60-1510915933:420992..421164Clytia hemisphaericaexon
TCONS_00071346-exon-scaffold_60-1510915933:420449..420570TCONS_00071346-exon-scaffold_60-1510915933:420449..420570Clytia hemisphaericaexon
TCONS_00071346-exon-scaffold_60-1510915933:418778..419467TCONS_00071346-exon-scaffold_60-1510915933:418778..419467Clytia hemisphaericaexon
TCONS_00071346-exon-scaffold_60-1491911889:431393..431569TCONS_00071346-exon-scaffold_60-1491911889:431393..431569Clytia hemisphaericaexon
TCONS_00071346-exon-scaffold_60-1491911889:426787..426851TCONS_00071346-exon-scaffold_60-1491911889:426787..426851Clytia hemisphaericaexon
TCONS_00071346-exon-scaffold_60-1491911889:426280..426313TCONS_00071346-exon-scaffold_60-1491911889:426280..426313Clytia hemisphaericaexon
TCONS_00071346-exon-scaffold_60-1491911889:425315..425479TCONS_00071346-exon-scaffold_60-1491911889:425315..425479Clytia hemisphaericaexon
TCONS_00071346-exon-scaffold_60-1491911889:424271..424430TCONS_00071346-exon-scaffold_60-1491911889:424271..424430Clytia hemisphaericaexon
TCONS_00071346-exon-scaffold_60-1491911889:422580..422698TCONS_00071346-exon-scaffold_60-1491911889:422580..422698Clytia hemisphaericaexon
TCONS_00071346-exon-scaffold_60-1491911889:421894..421959TCONS_00071346-exon-scaffold_60-1491911889:421894..421959Clytia hemisphaericaexon
TCONS_00071346-exon-scaffold_60-1491911889:420992..421164TCONS_00071346-exon-scaffold_60-1491911889:420992..421164Clytia hemisphaericaexon
TCONS_00071346-exon-scaffold_60-1491911889:420449..420570TCONS_00071346-exon-scaffold_60-1491911889:420449..420570Clytia hemisphaericaexon
TCONS_00071346-exon-scaffold_60-1491911889:418778..419467TCONS_00071346-exon-scaffold_60-1491911889:418778..419467Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:418778..431569 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
49.204	52.5	36.2179	35.6013	1.42939	1.08111	2.14142	2.21436	5.82489	4.97073	8.85169	13.3418	16.6868	20.2839	14.7157	11.5524	15.0329	14.4238	16.4343	14.8645	10.9069	11.5041	18.8373	19.6513	17.8749	18.5211	21.0222	24.3522	7.52089	8.39889
Blast
[Close]
BLAST of TCONS_00071346 vs. Swiss-Prot (Human)
Match: DHSO (Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=1 SV=4)

HSP 1 Score: 411.379 bits (1056), Expect = 1.165e-138
Identity = 196/345 (56.81%), Postives = 255/345 (73.91%), Query Frame = 3 
Query:  198 DNLSCVLYGIDDMRIESRPTPEPGPNQVLLSMHSVGICGSDVHYWKHGRIGDFVVNAPMVLGHEASGIVVETGEGVEHLKKGDRVAIEPGVPCRMCDCCKTGSYNLCPKMEFCATPPIDGSLCRYYVHAADFCYKLPDHVSCEEGALLEPLSVAVNACKRAQVKMGDHILVCGAGPIGLVSLLVAKACGATQVCITDLDENRLKVAKELGADMTFKITSRDGREVAEQVKKKFG-RIDKTIECSGAESSVHTAIYATASGGIAMLVGMGKAEINFPIFEALAREIDVRGNFRYVNCYPTALDLVASGKVNVKPLITHRFKLEESHKAFTTSSSPGCNTIKVMISC 1229
            +NLS V++G  D+R+E+ P PEPGPN+VLL MHSVGICGSDVHYW++GRIG+F+V  PMVLGHEASG V + G  V+HLK GDRVAIEPG P    + CK G YNL P + FCATPP DG+LCR+Y H A FCYKLPD+V+ EEGAL+EPLSV ++AC+R  V +G  +LVCGAGPIG+V+LLVAKA GA QV +TDL   RL  AKE+GAD+  +I+    +E+A +V+ + G + + TIEC+GAE+S+   IYAT SGG  +LVG+G      P+  A  RE+D++G FRY N +P A+ ++AS  VNVKPL+THRF LE++ +AF T    G   +K+M+ C
Sbjct:    8 NNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGNLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKK-GLG-LKIMLKC 350
The following BLAST results are available for this feature:
BLAST of TCONS_00071346 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DHSO1.165e-13856.81Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=... [more]
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