TCONS_00071200 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071200
Unique NameTCONS_00071200
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length154

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071200 ID=TCONS_00071200|Name=TCONS_00071200|organism=Clytia hemisphaerica|type=transcript|length=154bp
GCTAGTTCAATTCAGCATGTTCCTTGTTATTTTAAAGACTTACATTAATT
GACAGTTAGGAGATAAATCTTTCTCTTTTtagtttaaataaaaattgaca
aTGCCACTATCACCACTAATTTCAGGCAGGCCATTGATGAAAGGAAATAG
AGTA
Run BLAST on NCBI

transcript from alignment at scaffold_6:170094..170247

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071200 ID=TCONS_00071200|Name=TCONS_00071200|organism=Clytia hemisphaerica|type=transcript|length=154bp|location=Sequence derived from alignment at scaffold_6:170094..170247 (Clytia hemisphaerica)
TACTCTATTTCCTTTCATCAATGGCCTGCCTGAAATTAGTGGTGATAGTG
GCAttgtcaatttttatttaaactaAAAAGAGAAAGATTTATCTCCTAAC
TGTCAATTAATGTAAGTCTTTAAAATAACAAGGAACATGCTGAATTGAAC
TAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044256XLOC_044256Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071200-exon-scaffold_6-1491911889:170094..170247TCONS_00071200-exon-scaffold_6-1491911889:170094..170247Clytia hemisphaericaexon
TCONS_00071200-exon-scaffold_6-1510915933:170094..170247TCONS_00071200-exon-scaffold_6-1510915933:170094..170247Clytia hemisphaericaexon
TCONS_00071200-exon-scaffold_6-1575043694:170094..170247TCONS_00071200-exon-scaffold_6-1575043694:170094..170247Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:170094..170247 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071200 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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