TCONS_00071184 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071184
Unique NameTCONS_00071184
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2414

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071184 ID=TCONS_00071184|Name=TCONS_00071184|organism=Clytia hemisphaerica|type=transcript|length=2414bp
tttccAAACACTCAAGAAAGAGATTTACTCCAGAAGCTTTCTACCTATAC
CTTTTTACCTttgtttcttttgatcatgatcTTCAACGATACCAAGCGCC
TGGTACTTGTTGAGNTCACCATCTTCAGTCTTAACCCTTGAAGATACAGA
AAAACTTGGAATTCCTTTAAAAACTCCGTGGACCTTTTGGTATGacagGT
ACAAGAGGAATCTATCGGCTGCAGAATATGAAGCCAATTTGAAAAAGATC
TACACAGTTCGTACAGTGcagGGCTTTTGGAGTGTTTATAATAATATTCC
ACCAACGGGGAAGATCGGACTTGCTAGTTATCATCTAATGAGAGATGATC
GAAGACCTCTATGGGAAGATGAAGCAAATATCAAAGGTGGCTACTGGAAA
ATGAGATGTCCGAAAAATAAAACTCCACTAGTATGGAAAGAATTACTTTT
AGCATTAATCGGTGAACAATTTAAAGACCTAATCTCTGAAGCTGATATGA
TTGTAGGCGCAAGCGTCAGCATACGGGATCGAGatgatattttacaaatt
tggaACAATCGAAGTGTCGAAGCAAGTGATGCTAAGGTCATAAAGAAATT
AGGAGAACTTGTGCCAGGTTTAGATGTATCAGGAGCATTTTACAAAGCTC
ATCAAGCGCACGAAAACTTTGAATCCGGAGGCTCAAGAAAATCTTCAGCT
CAAACAGGCACATCACCATTCAATTTCAAACACAGTCCTATACATTCTCG
GTGACAGCTTAATATTGTACATAGTAGCTCCCCTCTTATATTCACAAATT
GTCATTGGTTTACGCGCCACTTTTTGCCAATAGTTGTAGATCTCTTGGTT
GAGCATTTTTATGGTAGATTCTTTTTGGTATGACTATATGACCAGGCTGG
TTGTTTTAGGTTTGGTGCATGATGCATTTGGTTGATAAATCTTAGCGGAT
TACACTCGTTTTTGTTCAATTCATccaaaattgacaatgttttgaaaata
ctttCGTAGGCATATGATCAAGCATAATTTTATCTTGGTAAGCATAATGA
GCCTCAGTCCGAGTTTCCCGTGTGCTTATTAAGCAAAACGTGTGTATTAT
AGTGATGCTAACAAAAGACTTAATAAAACAGTCAATTATTTCCTTAGCTG
AAGAATGATTTCATTAGTTTCATAACTcataaaaatctgtttttttcttt
cttcgtgGTACACTCTTTTTATATTGTCACATGATGTCAATTCGATTCAT
AATTTTGGTTCTTATCTTTTGTTCTTCGATAAGATCAAAGTCTAATTatg
aaatcttttaattttttcacgTCACATTTAAAGgggaaattaatattttt
tttgcccgtcaacttttcactttttcctcgtttttagaAAATACTCCAAA
TTTAATATTAATTGTCTAGTAACCAATCTCGTACCCGTTATTTATGTTAC
TTATGGGCAGAGAATACCttgcgctatcagtaagcatcaaaaagctgatc
aTAAGCAGGGAATGAGGTTGCTTAGTAACTTGTCTTGTTTGGAGGTCTTT
GGAATTACCTCTTTAGAATTTTCATTCCTAgatgtttgttttgtttatgt
cTTTAAGGCACTCTtaaattttagtattttttttgagtttcattttttgt
attaTTAGAAAAagcatttttctattttgatagtCATCTTGATAAAACAA
ACTAGACCTGAAAATACGATGTTTTCCCATAACCTTGAGAAGGGTCGTGG
CAAAGTATTCTTGTTTAAAATACACTGTAAGGTAATGAACTTTGCCATGA
ATCTTTTGTAAATTCTTAGCTGTTTTCATCGACAGACGGCGGGGAGTTgt
aattttcatgttttatgcTAGGTAGGCTCCCCACAAACAATTCAAAACAT
AACTTGTTTTGGTTTGCACCATAGTCAtagcaagaaatattttttaaatg
tatttttttctctAATGTATTATAGTGAATTtgactttttattatttttt
gcttactgttttattttgtgacctttttttagtcgtttgtttttaaaact
gcttgaatCTCACCCCTTTTGCATTAGTGTACGGTATAGGTAGGTATGTT
CCTTCTGAGGTATTCTTTCTTTATTGtttaatcaaaaaaaaaaaattgtg
tcaTTTTTTAATTGCAAAATTGTGcatcctttttaaaaaaacttgatttt
accacgcaaaataaaaattcttgaGTTTTTACATCTCAGActgaaaagta
aatatttttatttgctagtgttttacattttcatttgtatttagtttttt
tagattttcagaaACATTTTTTCTTACTTGTGCGTTTTCAGTTTTGTTAA
TcttcttttgtgtttttttttatcgtTAAGTTGTTTTCCCGTTTAGTTTT
TTCCGTTAATTCAT
Run BLAST on NCBI

protein sequence of TCONS_00071184-protein

>TCONS_00071184-protein ID=TCONS_00071184-protein|Name=TCONS_00071184-protein|organism=Clytia hemisphaerica|type=polypeptide|length=138bp
MRDDRRPLWEDEANIKGGYWKMRCPKNKTPLVWKELLLALIGEQFKDLIS
EADMIVGASVSIRDRDDILQIWNNRSVEASDAKVIKKLGELVPGLDVSGA
FYKAHQAHENFESGGSRKSSAQTGTSPFNFKHSPIHSR
Run BLAST on NCBI

transcript from alignment at scaffold_6:269823..285652-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071184 ID=TCONS_00071184|Name=TCONS_00071184|organism=Clytia hemisphaerica|type=transcript|length=15830bp|location=Sequence derived from alignment at scaffold_6:269823..285652- (Clytia hemisphaerica)
TTTCCAAACACTCAAGAAAGAGATTTACTCCAGAAGCTTTCTACCTATAC
CTTTTTACCTTTGTTTCTTTTGATCATGATCTTCAACGATACCAAGCGCC
TGGTACTTGTTGAGNTCACCATCTTCAGTCTTAACCCTTGAAGATACAGA
AAAACTTGGAATTCCTTTAAAAACTCCGTGGACCTTTTGGTATGACAGGT
AAAAAAATTTTTTAATGGTTTAACAAAGATTTTCTTCGAACATGGTACTT
GTGCCAAGTCTAATCATAAGATAGACTTAATGCATCTAAAGAAATTACTG
GCCTGCACAAATTCAGAGTGTTCTGGTATCAGGTCTTTTTTAATATAATG
TGAAGTCGGGTACGACCCTCGACATGGCCCGAGAATTCTCGGGCCAAAAC
TTTTATTGGAATTCGCGTAAAAACAGGCGTGTAATTTCAGGACTGAATTT
TTTTAACATTTTCTTTGAGAAAAACTTGGTTTCTCTTAATTATATTAAAT
ATATGAATGTTGTAAATTCATACAGTTAGGGAAACCATCCAGGATCCTGC
CATCCTATAAGCCATCAAAAACTAAATGCCACTTGTAAACTTAAGTTTCT
TACTATTTTCCATCAAAAACAACCAAAAACATTGCTACTTCCCAAAGCTG
GAGACCAAAACTAATTATCTTCCAAGATTATGGCGCCCTTTTGGATCTAT
TGTTATGGCCATCTAAAATGGTGGGAAGAGTTGCGGAAAGACAGGGGCGC
CCGCTAGCTTCGAGNNNNNNNNNNGGAACAGTCGCCTTATTAGGAGACGC
CTCCTGATTAGGAGACCCGTCTCCTAATCAGGAGGTTCACGTCTCCTAAT
TAGGAGACGGGTGTAATTATCTTGTGAATGAAGAAACTGCGCATAATTTG
GTTGATCCCATTGGAAAGAGCACAAAAAATTGATTCCATATGGTGATTTT
CAGAAAAATCCACCGGTGGAATCAATCACAATTCTAATAATCCATAAGAA
CCAATCAGAAGTAAGAATCTGTCTTCTGAACAAAAGCGTCTCAAAAACAA
AAATGGCGGACATGAAAAAAATCAAGAGGGGCTTCTTTGTAGTGCTTTAT
ATTAGGATTGTGATCGATTGCACCGAGAAATTTTAATAATTTTTTTAAAA
CTTTACGAATTCAAGGCTGCTCTTTCCATTAAAACTAGTTTCAAAATGCG
CGGAAAAGCCTAAAGCCCTTAAAATTGAGATCAAAGTTTTATGTCTCCTA
ATTAGGAGACGCGTCTCCTAATCAAGCGACCCCAAGCGACCTACATGTCT
CCTAATCAGGAGACGTCTCCTAATCAGGAGGCGTCTCCTAATAAGGCGAC
TGTTCCTGACTGCCAAAGCTGGAGACCAAAACAAACTATCTTCCAAGATT
ATGGCGCCCTTTTGGATCTATTGTTATGGCCATCTAAAATGGTGGGAAGA
GTTGCAGAAAGACAGGGGCGCCCGCTAGCTTCGAGGGTTGTAACGCCAAA
ACGTCCAATATGATCTTCCAACAAAAGGCGAGTTAGTTACCGCGCGAGTT
ACGTCATACACTCCACCGCAGCGCACAACAAATGGTGATTTAGTGAATAT
CAATAATTATAAGAATATTTTATGTGCTTAAATTCAGTAAACTTTGAGTG
CTTCATTGAAGATTAAGAAGATAATAAGATAAAAAATGCGCTGGATAATT
TTCATTGTAACAGTTTGGTCAATCATTGCTGAAAGTTTGAAAAAGTTTTT
CCGACGCAAAAAAAAATTTCAGCCAATTAANNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNCGTAAGTTGGTCTAATCTCGACATACGTCTTTCAATCTCGACACCGG
ATCTGTAAAATAATCAAAACAAACCTTGAATGAAATTCTTGATATCATTC
TTATCGAACAAGTTCATCCATCAAACTAGAATTTCAGTAAACATTGCAAT
CCTTTCAATTAAAAAAACAGCCAAATTATAAGCAGTTTTACACAACACAC
GAAACGCATGCAAACTTTCTCGTAACTTTCTCGTGTCCATCATTAAAATN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCATCATTAAAAT
TTTACAACTTTAATACGCTTCAAGTCACGTGATAAAAATAATTCGCGCGC
TTAGTCGACCTGGTTTCCATTTCCTTATTATTTATTGCAAGAACACGCTC
TAGGCGCTAGGAGGCCGCGTTAAACTTCTAGGCGCTGCACCTAGCACACC
CGGTCCCTTTTCAAATTCATAAGGAAACCTGGTTCTTTTAATTATTTTCG
GTTCGCGGTAAAAAGGTCTACTAAAAAATTCCTCGCGTGCAAAATTTTGT
CGTGATTTGGGTTTGGGTTTGGTTGAAAGCATGCTAATTAGTTTTTTAGT
GATTACTACATCGTTAAAGTGTTCTTTTCAAATATAAGTAATAACAGTTC
ACATTTCTCATATTATATTAACAATCTGTGACGTGATATAGAGAGAGTAC
AAGTGATTGATTGATAACTTTGGTATGTATTTGTTTATGTTTGATTTTTT
ATTTTGAAGACCAGCCTACAGCTATGTCGAGATTAGAAGACGTATGTCGA
TATTAAACGACTCTACGGTAGCCCTCAAATGAATGACCTGGCTGGTTCTT
AAAATACAAAGTTAAATAAAAACAAAAAATAGAGAAAATAGAGTAGAGCA
GTCTAGCAAAAAGTTAATTCTTCTTTCAGAAAAAAGACTACCTTATTGTA
TACATGAAAATAAATATGGAAGTATTTAAAAATGGCCTTGAAATTAACAC
GCAAAAAATTAACACAAATTTTATTTGCTTTTTATAGGACACCACGGCTG
GTTTAATTAAGGGGGTTTTTATTGACACGAAAATTTTCATTTTCATTCGT
GTTTTAAATACTTCCATACGTATTTATTTTCATGTAATAAGGTATAATTT
GTTTAACTTTATTCTTGCAGCTTCCCAACATCCAAGCTCTCAAACATAAG
TTAAATGAAATTACTTTTGATTTCCCGTAGAAATTATGCAATGAAAAATT
CGGGGCTCAATAAATGACAGGCTAGCTCTAAAGCTCTAAAACAGCATCTA
ATGACATGAAACTCAGGCAAGTTACGGTATGTCCAACTCCATTGCAAACC
AATAGCACTCGTTTTAGGGTACTCACTCATACATCAAAAGAAGCGTATTC
CGATGTACATTAACAAAATTGCTATGTTGGAATTATTTTTTGCAACCAAA
AAAAGTTATTACCCAAAAACATGGTTTTTGACTGCATAACGATGACGTCA
TAGAAATTAAAAATTGAATATCTCGAGAAGTACTCATCAAAATCACTTCA
AATTTTCACCAAAAGTTTGTATCGATAAGGTGGCAATCACAAATATCTTA
GTTTTGCGTCGCCCGACCGGCTCTCGAAAATTGAGTAGAATTGAGTCGGT
GAGTTGGTAAATTTATTGGACTTTTTCTGTCGGTGACGTTTCCTTCGTTC
AAAAATTTTATTACAGGTGTATGTACCGCAGAATGTACGTGAAATTTAGA
TCTCCTCTATTTTTAGCTGAAATTAGTTTTTCAAATATTTTTTTTTCCTT
TTGTGTATTTTTTTATCATAAAATCTCTTCATAGCGATACCTGTAGTGAT
GCAAGTGTCCAAAGCGATGACAATGAAGATGAAGATGAATATGTATCAGA
AGAGGAAGATGAGTTAGATGAGATTGAATTGATGAAAAAGGCATGGGAAT
TTCTCAGCCTTTCAACTAAAGAGGATGATTTAATTGGAAAATGGTTCGCC
AGAAACCAGAACATGATTCTTCAATGGGAATCAAACTATAAAGTGCACCA
GAGTGCACTTACAAACATCAATATATCAGATCTAACAAAATTAATAACAG
GACTGTCATCATTGACAATAAAACAAAGGATTTTCTATCAAGAGTCTTGT
AAACATTCCAACAACTTCCATCGAAATGATCTGTCACGGCTGAGTCTACC
ATTTTTAACATGGTCTGAGGATTGAGCCGAGAACACCCGCAGAACGCCCT
TAGAAAACCTGTAGAACGCCTGCGTGCTCCCTCGCGGGTGAAAAACTTTA
ATCTGTAAATCATATTCTCAAGCGAAGGAGTATGCCAAGCGATTCTAGCT
TTACGATAGTGCTGGGGATCATCAGTGGATAGTATTCAATTATCATTATC
CCTTTATTTTCATTCCTAGAACTTTTGCAAAAAAAATGAAAAATAGAAAA
GANTTCAATTATCATTACCCCTTTATTTTCATTCCTAGAACTTTTGCAAA
AAAAAGGAAAAATAGAAAAGTTTCAAATTTCAAAAAACTGATTTTTGTCC
TGCGGGACTTTGGCTTAAGTGCTTGAATGCAGCATAGGGTACAAAGTGCA
AATATGCGTTTCCCGTAATTTCTGTATGAAGAATTAGGTCTATACTGAAT
GAAGACTTTCTTTTGCGCACAAGATTTCTTTGCTTATAATGAATGATTAC
TTTTCAATATATTTGTTAGATATAATTTTTGATTACAAAAATACTTTACA
TTGTATTTAAAGTTTGCAAAAATCGGTTCTACTTAGTTCTTTGTTTTCAT
GTCCAACCCCTGTCTCAAGAATCCCGAGATTTTGGCAGTCGGGCGTTCAA
AACAAAGGAGTTTTTATTTTTCTGCCCACAATTTTTCTTTAAAATAGGCA
TTTAAAATATGGAATTTAAAAATGATAGTATAAAACCTTATTTTCTACCG
TATAGTCCTTCTTTTAAAACAAAAAAAACAAAATACACTAGAAAAATAAA
GCAATTACGAGTGTTATCAAGCCACCCAAAATGAACTTTTATTCAGTCAG
GACCTCCTTTCACTTTATTGATATTACGCAAACAGCAGTGTGCACTAAAT
TATTTTGGTTTCACTTTCGATTTCAAGCAAAGGTCTTAGCAACAGGGCGC
GCGTACATAGCAACAGGGCTGGGTAGAAAAATCTAAACATAGAAATCAAA
AAAAATACGATCATCGTATAGAGCACTAAAAAATACCCTGTGCGGTAATC
TTTGCCTGTTCCAATTCTTAGATAATGAATAAGAGAGGTGGGCTTAGCTA
AGCCATGCTCGTGGGCAATGAATTTATGTTTACTTCTCTTGTATACTTTA
GTGGTATTTATCCAATGAAAAGGATGTTGACAAAATATGCACGGCATTGA
TTATGACATCATTAAAATATTCACTTTATGACACACTGTTCAGGGTGTTA
GGCTGTTAAACTTGTGTTTGCACAAACAGCAATTTGTCAGATCTAACAAA
ATTAATAACAGCACTGTCATCATTTGATAATCATTTGACAATCAATTTTC
TGTCAAGAACCTTTCAAATATTCCAACAACTTCCATTGAAATAATTTGCC
GCAGCTCAGTTCTACCATTTTGCCCAGTTTGAGGATTATTGCAGAGTCAC
CTACGAATTCCCTTATGGTTGAAAAACTTTTTGATCTGTCAATCATTTTC
TCAGTCAAAGAGCTGAAAACTGAAAACTAGCACTTGCTCTATTGTCTTAC
TCGGGTAACTTAATGCATGTCCCAGANNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNATTAAATTTGGACCAGTGATAAAGTACATTGAGATGTTTCA
AAAACTTTTGAAAGTATTTTCCAAAATTAATGACGTCAGCAGAAATTGCA
AGAATTCGATTTTTTGCGATAAAATGCTGACATCGGCAAATTTTCAAATT
TTTAAAAAAAGATTCTCCTCCTCTTGATGAGTTCTATCATTGGTTCAAAT
TTCATAAAGCTTTGAGTATTAGTTCTTGAGATATTCAACTTTTTTAAATT
ATGACGTCATAATCATGTTTTCTTAAAAAAACTCAAATTCTGCTGAGAAA
GAATTTAAGTTACACCAAATACAGTATTCTACATCCAAATACGCTTCCAA
AAATGTATAGTTTGTTATGGTTTAGGGACTGGAACTGGGGCGGAAAAATT
GATGCAATTCTGGGACATGCATTAAGTTACCCGAGTAAACCTGCCAGTGA
GTGGCGGTGCCTTTTGATCATTCTTGTCATGTGTTAGCTACCAGAAAATT
AGATATAGATATGGTTTCAGTAAACAAAATTTTATCCTCTAGGCTTTTTG
TCGCACATTATCACGCATTATCTCACAGTGGAAACCTACCTTTACCGTCT
TATTTTTTTCTTTTTAAGCTCAAAAACAAAACTTATTTGTGTACTTTGTT
TGGTTTGCTGATTTTCTTTGTAGGTATGGATTGTTATTTAGTTTCAAAAG
ACTAAAATAATAATAAAAGGTTTCTAAGGCTAGAACCTTCAAATTAGCAA
ATTCTTTTACTATTTAAGCTGTCCACTGGAAAAAATAAGTTCATTGCAAA
TTTTTTTGTTACAAAAAAGCGCTTTCATTCTACATTGTTTATTATTTTTT
ACTTTGTCTATTTTTTTTCATTGGACACTCAGCTTTAGTAACTTAAAAGA
TTATCAAAAAAGACTAGTATTTAAAAAATTGGGTTGCTTATGAAAACGAT
TTACTGGATTACTCATTTTTTTATTTTGGCCTAATTATAGACTTTCTGAA
ACTCTTAGACTTTGCAGCCTAATGATTGCTGTGTACTTTTTGGCTTGACT
CTTTTTAGTTGAATAATGACTGAAATTAAACAGATGAAAATTGAGTCTAC
TATCACTTAGGTTATCATGTCGGGTTATCATTTTTTTGGATTACCTTAAG
GTGGGAGTCACATGAAGCTTTGAGATTTGGTGAAAAAATTATAGATTTCG
GGATTTTGCGTGTTTCATGACCCTATACCCTTTCTTAACACACCTTGAAA
ATTTTAAGGCCGTAGCATTTACATTTCCTGAGATATAAGGTTTTTTCTAG
ACCCTGATCTAAAGTATTTTCCTTAGCAATGAAAAATCATACCCGTTGCT
AGGGCCCAATTTCTTTATGGCTTATCTAAACATAGGATCATGGCACACCA
AACGAAAGATCTTTTTACGCCCTTTTTGGGGGTCTAAGTCAATACTGCCT
TTTTTCCGCGGGATTTCCTAATATGACGTAATTAAAGAGATTGTAACCAA
AAAAGTAATATTTAAAAAAAAAATACAAATTTGGAGACTGTCAGCAGTGT
TTTTGACTATGAAAACTGTTTTAATTTGGAAATGTTGGATTAAATGATGA
CAGTTTTAGCTCTTTAATGTCATTCTTCTCGACTAAGGAAGCTTGAGCTA
GGTGAAAACAAAGACTTGATTTTCAAACTCAACGTTTCCGATGAACTTAG
TTTGACACCGAAAAGGACAAACAATGGACCGAAGGCATATTCAATGATGT
ATCTATTCAAAGATCCAAGTGTTAAAGAAATTGAAAGCCTGGAGGCTGGT
TTAACAATTGTGTGTGGTGAATTATTGAAGGTCTGGGACGCTCCCCTCCA
CCCTCTGGATGATTTACATTCATGAGGAGAAATCGTGCACAACTTACGGC
TATGTCCAAGTCCAAGTGGATTCTTGTATCACTACAGAACAACTTTAAAT
TAACTTATAACTGACAGATGCAGTGNTTCTATTCCGACTTTTTGGAATAA
CAGATCGGGTTGTAGTTGACGAAAAACTTTCAACCTTTTAAAATTCATTG
TTGGAAATTTTAAAAATGTGAAGCTATTGCTATAAAGATTAGCCTAGTTT
AGTTTAGGATATAATTTTCTTTGACGTTTAGAATTTTGGTTTTGAAATTT
TTGTCTTATTTATGATTATTGCAATTAAATTATTTGTCATTTATTTCTTA
TTACTTATTGTGCTTAGAATTGTTTTACAGGGATTTGTTATATTTCAAAT
AAATAGAAATTTTGTACTTGAAGTGATCCGATTTGTTTATAATGCTTTCT
GATCAGCTGGAATTATACCGGTTTTCATGAGTGAGGATTAAATTTCTATT
GTTTCTAGCACCAAAAACTCTATTTTTTTAATTTTGGCAAAATTCTTTAA
TTGCAGTGAATTTTTTTCTATTACTATTGGTTTCTATTATGTTGAACGGT
GAAAAAGCGAATTCGGCTATTATACCTTATCGGGGAAAAAATGTCGTCAC
CTAAGGCATTTTCCCCCGACCAAAATTTCAAATTCGTCACTTTTCCCCGA
CGAAATTTACAATTTTAGTCACTTTCACCCAAATGAAATGGTTTCCTTCA
CTAGCTCGAAAATTGATATTGTAATTCGACGTTTAAGGTGGGAGTCACAT
GAAGCTTTGAGATTTGGTGAAAAAATTATCGATTTCGAGATTTTGCGTGT
TTCATGACCCTATACCCTTTCTGAACACACCTTGAAAATTTTAAGGCTGT
AGCATTTATATTTCCTGAGATATAAGGTTTTTTCTAGACCCTGATCTGAA
GTATTTTCCTTAGCAACGAGAAATCAGACCCGTTGCTAGGGCCCAATTTC
TTTATGGCTGATCTAAACATAGGATCATGGCATACCAAACGAAAGATCTT
TTTACGCCCTTTTCGGGCGTCTAAGTCAATNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNAAATTTGGAGGCTGTCAGCAGTGTTTTTGACTATGAAAGCTGTTTT
AATTTGGAAATGTTGGACTGACTGATGACATTTTTAGCTCTTTGATGTCA
TTCTTTTCAACTAAGGAAGCTTGAGCTAGGTGAAACTAAAGACTTGATTC
CCAAAGTCAACGTTTCTGATGAACACCGAAAAACTTTGAAGAACAAACTT
TAATGGACCGACAAAGGCATATTTAATGATGTATCTATTCAAAGATCCAA
GTGCTAAAGATATTGAAAGCTCCTGGAGGCTGGTTTAATAATTATGTGAG
ATGAATTATTGAAGGTCTGGGACTATTAGGTCTGGGATTATTTACATTCA
CGAGGAGAAATTGTCAACATCGCGTGATGTCCAACGTCAAAGTGGATTCT
TGTATTACTACAGATAAACGTTAAATTAACTTATAACTGACAGATGCAGT
GAGGAAAATATACTATTACATTGAAAATGTTGTTATTGTCAATTGTTGTG
AAAACACATTAAAATTGACTTAAATCGATGTTGACGTGGAGTTTGGCGCA
AAATTTTAAGGATTGGCGCGTATCACGTGAAAGTGATAATTTAGAATTTC
TGAACTATTATGGTATTTCAAAGCCCTTTCTAAAGTATATAAAGTAGTAC
TTTATTCCATTTTAGTCAAACACAGAAAGAATTTTGTAAAACGGTCGATT
TATCACAGAGAAATAGAGATTTATATCTCACTTCTGACTTTACGGACCAT
TTTCTCAAAATAGGTTTCAGGGGGTTTTCGCATACCTTGGCAACGTTTTT
TCAGGATTGGAAAGAGCTATGATCATGAAATTTTCAGGAGTTGCTCCATT
TATGGTTTGCTATGGAATGAATGGNTACAGAGAAATTGAGATATATATCT
ACTTCTAACTTTACGGATCATTTTCTCAAAAAAGGTTTCAGGGGGTTTTC
GCACACCTTGGCAACGTTTTCTCAGGATTGGAAAGAGCTATGATCATGAA
ATTTTCAGGAGTAGCTCCATTTATAGTTTGCTATGGAATTAATGGAGTAG
ATTTTTGAAAAAATCACTTTTCAATTTTAAAACTCGAAAAAACTTAAATT
TTCTATTTTTTAGGTTTCAGACCCCCTGGGATGAAATTTTGAAAATTTTT
CCATTCGTTCCACAGCTTATCCTAATACTAGCAACCTCCAAAAAAATTTT
TGGAATAGCTTTTATAGTATGTCTATGGCATATATATATTTTTTTATTCA
TCACGCTAGGTACAAGAGGAATCTATCGGCTGCAGAATATGAAGCCAATT
TGAAAAAGATCTACACAGTTCGTACAGTGCAGGTTTGTTTTTTTGTTTTT
TAAAGTATTTTTCTAATAAAAATTATATATCGACCACTCACTATCAACAA
GCTCTGTCTACAGGACCTTAAAACCCTGAAAACTAGACTTTTCCAGGAAG
AAATTTGAAACCTTGAGAAATTGAAATTGACGTTGAAAAGTATTTTGATA
GCATGCTAGCCAAGCCATATTGGCGTCAATTCAGGAATCACGAGGGAAAT
ATAATTGAAGTTAAATTTCTGATATTCGTTACGTTGATCTTTTATAGCTA
GATTGACTAAATTATATAATCTTTATCTACAGGGCTTTTGGAGTGTTTAT
AATAATATTCCACCAACGGGGAAGATCGGACTTGCTAGTTATCATCTAAT
GAGAGATGATCGAAGACCTCTATGGTGAGTTTGTATCTTTTTGCTTGCCC
CCCTCCATAATGACGAGGGTTTACATGATTTGGAGATATCATCTTTCCTT
TCATAACTCCATTATACTGTCAAGTGTGCTACCTTTTAATTAATTATTAA
TTGAATGATGCATTTTGTGGAAAATATATTTTATGGGTTGGCCTAAACCT
GCAAGGTGCGACAAAACTATGTGAAGCTTTTATAAGAGTTTTCAGAAGAA
ACTATCAATGACCACCTTTTATAATATTTTCTGTTTATATAAATTTTGAG
GTATCAAATTACGACATTATTCAATTATAAGCAGTTTACATCATAATTAT
GTCCATGTGGTGTGGACACACGAAACCCTCTATTAAAATGATTCAAAAAC
CACACACCTTCCCTGTTCTCGAGACTTTTTAACAACAAAACTTTTGAGTA
GAGCTAACCTCAAACTGCTTTTTTTCATAAAAAAAATTGGAATCATTTTC
CAGTAATTCTAACACTTCATTTTCTAACTTTTCCCAATATTATGTTTAGT
CAGGGTCAGCTTTGTCAATTAACTTAGGAATGCTCCAAGTACACAACTCA
GATTACTGTATAAAATAGTTTTACAGCTTAAGGGNAATATTATGTTTAGT
CAGGGTCAGCTTTGTCAATTAACTTAGGAATGCTCCAAGTACACAACTCA
GATTACTGTATAAAATAGTTTTACAGCTTAAGGGCTACATACACTACACA
ATATATTGTCAAGCAATATATTGAAAAGATGTTCACAATATATTGTCATC
TCGTTTTGAAATATTTCTAAAATATTATAAATGTTTACAGAAAGAAAATT
CCTTTTGATAATAGAGTACTGTACCAGTTGTTTACTTAGTATATTACGAT
CCGCAAGCCATATCGTTGAATAATGTTCGTCAATATATTGTGTAGTCTAA
GTAGCCCTGACAATCAAACTCTTAAAGTTCGAACATTTTCAGGTTCATTC
ACATTCTTAATATGCTACATCACAAAATTAAAGACGAATTCTTTTTTATG
ATATAGATAGGATTTTTTTAAATTTGTGTCCCCCCCTTCTTTCCCGGGTT
GGTACTAACATTTCAAACGTGTTGTTTAGTGACGTGGTTGAATACCCTAA
AAAATAAAGAATCCTTTACAAACTAAACAAAAAGGCGGTATCCAGGATAA
AATTTAAGAAAATTTTAAAAGTACGTTATTACTAAAATTATTGATTTCAT
AATTTTTTGAATTTTTATCATAATTTTTCGTAATTTTTCAAAAAGAAAAT
TCCAATTTTTCTCATTTAGAGAAACTTTCCTAAGTTCACTTATTCCTGCA
TAGAGTCAAATGTCTTTAATGTTTGCTGAATTCATAAAGCACTGTGTAAA
TTTCTTTAATGCTTTTTTTATAGGGAAGATGAAGCAAATATCAAAGGTGG
CTACTGGAAAATGAGATGTCCGAAAAATAAAACTGTAAGACTTTCATACT
CAATTTGTTGTTTAGATTAGGACACTTTATTAAAAACCATTTTCATGGAC
AAGCCAAATATCGCAATGGTCTGTGGGTGGTAAGTTTTGATATCTGGTAG
AATTACATAGGGATATGCAAAAATAATATGTCAAAAATAACTGTATATAA
TTCTAAGGGGTAACTTTTCAAATTCTTCAACAATTTAGAATTCCGGAGGG
GTTTAAACCTAAACTTGTCTAGAATTCCTGAGGTCAACAACATTTTCAGA
AAAAGGGTAGGACCTCCTCAACAGGGGTTCTACAGATTTCTTTCTGGAAA
AGCCCAATATTTGAAGGAAAAATATTAATTTGAATATTATCTCTATGAAT
TTCTTTTGATTTAAACATCCACTTATTCGAATGTTTCAGTGATAGGATCA
ATTTAATTGTATAACCAATCACCTGTATACGTTTAGGTTAGCTCTGAAAA
ACCCTTAAGATTTCCTATCTTCCTTTAATTTTTTCTTGTTTGCTTTCCTT
TCCAGCCACTAGTATGGAAAGAATTACTTTTAGCATTAATCGGTGAACAA
TTTAAAGACCTAATCTCTGAAGGTATGCTTTTATTACGAGATAATACCCC
TATCTGGAAGATGATTCAATGATTCCTAAACCAATAGGTGGCTTTGATTT
AATGTTTAACTGTTTTAACCGGTTTTGTTTACAAGAAATAGTTAATAAAA
AGTTATGACAGTGACACACCAAGGCTTTTGAATGGCTCTACTGGCAATAA
CTATAAATTTTGTATTGGATTTTTAGCTGATATGATTGTAGGCGCAAGCG
TCAGCATACGGGATCGAGATGATATTTTACAAATTTGGAACAATCGAAGT
GTCGAAGCAAGTGATGCTAAGGTGAGACTAAAATTGATTTACAATGTTTA
TATAGACAATTGTCGATGTATCGGCTGATTCTATCATTCTTAAAATCAAC
TTACTTAGGCAAAATCCTACTTCAATACAATGCAGCATGAAATAGTGATA
GTTACAAGAAAACTTTAAATTTTTGTTTATGGTCCGTTTCTCATTTGGAT
TTCTTTAGCCAAAAAGTATCATCAACTTTTCGATTCCTAATCCAAAGAAG
CCAACCTTCGCAATTCTTTGAATCTAAGAGGAGGGTCGATTAGGTGATGG
CAAAGCAACACATTAAAACTTAACCATAAATATCTAATTTATTGTTTTAG
GTCATAAAGAAATTAGGAGAACTTGTGCCAGGTTTAGATGTATCAGGAGC
ATTTTACAAAGGTAAGATCTTGTTCAAATAATGTACCAGATATCCAAAAC
GGTGAAACGTGTATTTTGTGAAGCGAAACTTTCTAAAGATGTATGTCCAG
AGACTTCTTCCTGGTTTTACAAATAACCTATAATTTTACTTCATAGGAAA
ATCGACTTTGATATTATCCAATTTCAAGTTCAGTAGAAAAACTTCACTTT
AAACCACCCTCACTAGATTCTTTTGAGCTGGGAATAGTAGAGTTTCTATC
CTCATCGGGAAAAAGTTTCACCTAGGCTGCGAGACAGGGTTGTATAGAAT
AGAATGACAAAACACTTTTTCACATATTACTTGCTCTTCTTAAATTGATT
GCTCTTTTTTCAGCTCATCAAGCGCACGAAAACTTTGAATCCGGAGGCTC
AAGAAAATCTTCAGCTCAAACAGGCACATCACCATTCAATTTCAAACACA
GTCCTATACATTCTCGGTGACAGCTTAATATTGTACATAGTAGCTCCCCT
CTTATATTCACAAATTGTCATTGGTTTACGCGCCACTTTTTGCCAATAGT
TGTAGATCTCTTGGTTGAGCATTTTTATGGTAGATTCTTTTTGGTATGAC
TATATGACCAGGCTGGTTGTTTTAGGTTTGGTGCATGATGCATTTGGTTG
ATAAATCTTAGCGGATTACACTCGTTTTTGTTCAATTCATCCAAAATTGA
CAATGTTTTGAAAATACTTTCGTAGGCATATGATCAAGCATAATTTTATC
TTGGTAAGCATAATGAGCCTCAGTCCGAGTTTCCCGTGTGCTTATTAAGC
AAAACGTGTGTATTATAGTGATGCTAACAAAAGACTTAATAAAACAGTCA
ATTATTTCCTTAGCTGAAGAATGATTTCATTAGTTTCATAACTCATAAAA
ATCTGTTTTTTTCTTTCTTCGTGGTACACTCTTTTTATATTGTCACATGA
TGTCAATTCGATTCATAATTTTGGTTCTTATCTTTTGTTCTTCGATAAGA
TCAAAGTCTAATTATGAAATCTTTTAATTTTTTCACGTCACATTTAAAGG
GGAAATTAATATTTTTTTTGCCCGTCAACTTTTCACTTTTTCCTCGTTTT
TAGAAAATACTCCAAATTTAATATTAATTGTCTAGTAACCAATCTCGTAC
CCGTTATTTATGTTACTTATGGGCAGAGAATACCTTGCGCTATCAGTAAG
CATCAAAAAGCTGATCATAAGCAGGGAATGAGGTTGCTTAGTAACTTGTC
TTGTTTGGAGGTCTTTGGAATTACCTCTTTAGAATTTTCATTCCTAGATG
TTTGTTTTGTTTATGTCTTTAAGGCACTCTTAAATTTTAGTATTTTTTTT
GAGTTTCATTTTTTGTATTATTAGAAAAAGCATTTTTCTATTTTGATAGT
CATCTTGATAAAACAAACTAGACCTGAAAATACGATGTTTTCCCATAACC
TTGAGAAGGGTCGTGGCAAAGTATTCTTGTTTAAAATACACTGTAAGGTA
ATGAACTTTGCCATGAATCTTTTGTAAATTCTTAGCTGTTTTCATCGACA
GACGGCGGGGAGTTGTAATTTTCATGTTTTATGCTAGGTAGGCTCCCCAC
AAACAATTCAAAACATAACTTGTTTTGGTTTGCACCATAGTCATAGCAAG
AAATATTTTTTAAATGTATTTTTTTCTCTAATGTATTATAGTGAATTTGA
CTTTTTATTATTTTTTGCTTACTGTTTTATTTTGTGACCTTTTTTTAGTC
GTTTGTTTTTAAAACTGCTTGAATCTCACCCCTTTTGCATTAGTGTACGG
TATAGGTAGGTATGTTCCTTCTGAGGTATTCTTTCTTTATTGTTTAATCA
AAAAAAAAAAATTGTGTCATTTTTTAATTGCAAAATTGTGCATCCTTTTT
AAAAAAACTTGATTTTACCACGCAAAATAAAAATTCTTGAGTTTTTACAT
CTCAGACTGAAAAGTAAATATTTTTATTTGCTAGTGTTTTACATTTTCAT
TTGTATTTAGTTTTTTTAGATTTTCAGAAACATTTTTTCTTACTTGTGCG
TTTTCAGTTTTGTTAATCTTCTTTTGTGTTTTTTTTTATCGTTAAGTTGT
TTTCCCGTTTAGTTTTTTCCGTTAATTCAT

Coding sequence (CDS) from alignment at scaffold_6:269823..285652-

>TCONS_00071184 ID=TCONS_00071184|Name=TCONS_00071184|organism=Clytia hemisphaerica|type=CDS|length=2502bp|location=Sequence derived from alignment at scaffold_6:269823..285652- (Clytia hemisphaerica)
CTCATCAAGCGCACGAAAACTTTGAATCCGGAGGCTCAAGAAAATCTTCA
GCTCAAACAGGCACATCACCATTCAATTTCAAACACAGTCCTATACATTC
TCGGTGAGTCATAAAGAAATTAGGAGAACTTGTGCCAGGTTTAGATGTAT
CAGGAGCATTTTACAAAGCTGATATGATTGTAGGCGCAAGCGTCAGCATA
CGGGATCGAGATGATATTTTACAAATTTGGAACAATCGAAGTGTCGAAGC
AAGTGATGCTAAGCCACTAGTATGGAAAGAATTACTTTTAGCATTAATCG
GTGAACAATTTAAAGACCTAATCTCTGAAGGGAAGATGAAGCAAATATCA
AAGGTGGCTACTGGAAAATGAGATGTCCGAAAAATAAAACTATGAGAGAT
GATCGAAGACCTCTATGCTCATCAAGCGCACGAAAACTTTGAATCCGGAG
GCTCAAGAAAATCTTCAGCTCAAACAGGCACATCACCATTCAATTTCAAA
CACAGTCCTATACATTCTCGGTGAGTCATAAAGAAATTAGGAGAACTTGT
GCCAGGTTTAGATGTATCAGGAGCATTTTACAAAGCTGATATGATTGTAG
GCGCAAGCGTCAGCATACGGGATCGAGATGATATTTTACAAATTTGGAAC
AATCGAAGTGTCGAAGCAAGTGATGCTAAGCCACTAGTATGGAAAGAATT
ACTTTTAGCATTAATCGGTGAACAATTTAAAGACCTAATCTCTGAAGGGA
AGATGAAGCAAATATCAAAGGTGGCTACTGGAAAATGAGATGTCCGAAAA
ATAAAACTATGAGAGATGATCGAAGACCTCTATGCTCATCAAGCGCACGA
AAACTTTGAATCCGGAGGCTCAAGAAAATCTTCAGCTCAAACAGGCACAT
CACCATTCAATTTCAAACACAGTCCTATACATTCTCGGTGAGTCATAAAG
AAATTAGGAGAACTTGTGCCAGGTTTAGATGTATCAGGAGCATTTTACAA
AGCTGATATGATTGTAGGCGCAAGCGTCAGCATACGGGATCGAGATGATA
TTTTACAAATTTGGAACAATCGAAGTGTCGAAGCAAGTGATGCTAAGCCA
CTAGTATGGAAAGAATTACTTTTAGCATTAATCGGTGAACAATTTAAAGA
CCTAATCTCTGAAGGGAAGATGAAGCAAATATCAAAGGTGGCTACTGGAA
AATGAGATGTCCGAAAAATAAAACTATGAGAGATGATCGAAGACCTCTAT
GCTCATCAAGCGCACGAAAACTTTGAATCCGGAGGCTCAAGAAAATCTTC
AGCTCAAACAGGCACATCACCATTCAATTTCAAACACAGTCCTATACATT
CTCGGTGAGTCATAAAGAAATTAGGAGAACTTGTGCCAGGTTTAGATGTA
TCAGGAGCATTTTACAAAGCTGATATGATTGTAGGCGCAAGCGTCAGCAT
ACGGGATCGAGATGATATTTTACAAATTTGGAACAATCGAAGTGTCGAAG
CAAGTGATGCTAAGCCACTAGTATGGAAAGAATTACTTTTAGCATTAATC
GGTGAACAATTTAAAGACCTAATCTCTGAAGGGAAGATGAAGCAAATATC
AAAGGTGGCTACTGGAAAATGAGATGTCCGAAAAATAAAACTATGAGAGA
TGATCGAAGACCTCTATGCTCATCAAGCGCACGAAAACTTTGAATCCGGA
GGCTCAAGAAAATCTTCAGCTCAAACAGGCACATCACCATTCAATTTCAA
ACACAGTCCTATACATTCTCGGTGAGTCATAAAGAAATTAGGAGAACTTG
TGCCAGGTTTAGATGTATCAGGAGCATTTTACAAAGCTGATATGATTGTA
GGCGCAAGCGTCAGCATACGGGATCGAGATGATATTTTACAAATTTGGAA
CAATCGAAGTGTCGAAGCAAGTGATGCTAAGCCACTAGTATGGAAAGAAT
TACTTTTAGCATTAATCGGTGAACAATTTAAAGACCTAATCTCTGAAGGG
AAGATGAAGCAAATATCAAAGGTGGCTACTGGAAAATGAGATGTCCGAAA
AATAAAACTATGAGAGATGATCGAAGACCTCTATGCTCATCAAGCGCACG
AAAACTTTGAATCCGGAGGCTCAAGAAAATCTTCAGCTCAAACAGGCACA
TCACCATTCAATTTCAAACACAGTCCTATACATTCTCGGTGAGTCATAAA
GAAATTAGGAGAACTTGTGCCAGGTTTAGATGTATCAGGAGCATTTTACA
AAGCTGATATGATTGTAGGCGCAAGCGTCAGCATACGGGATCGAGATGAT
ATTTTACAAATTTGGAACAATCGAAGTGTCGAAGCAAGTGATGCTAAGCC
ACTAGTATGGAAAGAATTACTTTTAGCATTAATCGGTGAACAATTTAAAG
ACCTAATCTCTGAAGGGAAGATGAAGCAAATATCAAAGGTGGCTACTGGA
AAATGAGATGTCCGAAAAATAAAACTATGAGAGATGATCGAAGACCTCTA
TG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044240XLOC_044240Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071184-proteinTCONS_00071184-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071184-exon-scaffold_6-1575043694:285455..285652TCONS_00071184-exon-scaffold_6-1575043694:285455..285652Clytia hemisphaericaexon
TCONS_00071184-exon-scaffold_6-1575043694:275071..275143TCONS_00071184-exon-scaffold_6-1575043694:275071..275143Clytia hemisphaericaexon
TCONS_00071184-exon-scaffold_6-1575043694:274679..274770TCONS_00071184-exon-scaffold_6-1575043694:274679..274770Clytia hemisphaericaexon
TCONS_00071184-exon-scaffold_6-1575043694:273219..273279TCONS_00071184-exon-scaffold_6-1575043694:273219..273279Clytia hemisphaericaexon
TCONS_00071184-exon-scaffold_6-1575043694:272631..272697TCONS_00071184-exon-scaffold_6-1575043694:272631..272697Clytia hemisphaericaexon
TCONS_00071184-exon-scaffold_6-1575043694:272332..272426TCONS_00071184-exon-scaffold_6-1575043694:272332..272426Clytia hemisphaericaexon
TCONS_00071184-exon-scaffold_6-1575043694:271942..272002TCONS_00071184-exon-scaffold_6-1575043694:271942..272002Clytia hemisphaericaexon
TCONS_00071184-exon-scaffold_6-1575043694:269823..271589TCONS_00071184-exon-scaffold_6-1575043694:269823..271589Clytia hemisphaericaexon
TCONS_00071184-exon-scaffold_6-1510915933:285455..285652TCONS_00071184-exon-scaffold_6-1510915933:285455..285652Clytia hemisphaericaexon
TCONS_00071184-exon-scaffold_6-1510915933:275071..275143TCONS_00071184-exon-scaffold_6-1510915933:275071..275143Clytia hemisphaericaexon
TCONS_00071184-exon-scaffold_6-1510915933:274679..274770TCONS_00071184-exon-scaffold_6-1510915933:274679..274770Clytia hemisphaericaexon
TCONS_00071184-exon-scaffold_6-1510915933:273219..273279TCONS_00071184-exon-scaffold_6-1510915933:273219..273279Clytia hemisphaericaexon
TCONS_00071184-exon-scaffold_6-1510915933:272631..272697TCONS_00071184-exon-scaffold_6-1510915933:272631..272697Clytia hemisphaericaexon
TCONS_00071184-exon-scaffold_6-1510915933:272332..272426TCONS_00071184-exon-scaffold_6-1510915933:272332..272426Clytia hemisphaericaexon
TCONS_00071184-exon-scaffold_6-1510915933:271942..272002TCONS_00071184-exon-scaffold_6-1510915933:271942..272002Clytia hemisphaericaexon
TCONS_00071184-exon-scaffold_6-1510915933:269823..271589TCONS_00071184-exon-scaffold_6-1510915933:269823..271589Clytia hemisphaericaexon
TCONS_00071184-exon-scaffold_6-1491911889:285455..285652TCONS_00071184-exon-scaffold_6-1491911889:285455..285652Clytia hemisphaericaexon
TCONS_00071184-exon-scaffold_6-1491911889:275071..275143TCONS_00071184-exon-scaffold_6-1491911889:275071..275143Clytia hemisphaericaexon
TCONS_00071184-exon-scaffold_6-1491911889:274679..274770TCONS_00071184-exon-scaffold_6-1491911889:274679..274770Clytia hemisphaericaexon
TCONS_00071184-exon-scaffold_6-1491911889:273219..273279TCONS_00071184-exon-scaffold_6-1491911889:273219..273279Clytia hemisphaericaexon
TCONS_00071184-exon-scaffold_6-1491911889:272631..272697TCONS_00071184-exon-scaffold_6-1491911889:272631..272697Clytia hemisphaericaexon
TCONS_00071184-exon-scaffold_6-1491911889:272332..272426TCONS_00071184-exon-scaffold_6-1491911889:272332..272426Clytia hemisphaericaexon
TCONS_00071184-exon-scaffold_6-1491911889:271942..272002TCONS_00071184-exon-scaffold_6-1491911889:271942..272002Clytia hemisphaericaexon
TCONS_00071184-exon-scaffold_6-1491911889:269823..271589TCONS_00071184-exon-scaffold_6-1491911889:269823..271589Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:269823..285652 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.05704	3.18506	12.8798	16.3081	33.3713	23.8671	34.6901	36.1172	22.7918	26.0816	18.6646	17.2843	14.9917	15.8469	13.6404	14.001	14.0473	14.9798	8.07294	9.77218	13.4719	14.2273	7.7851	11.2708	16.1174	17.252	22.371	15.846	11.6257	12.8819
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR023398TIF_eIF4e-like
IPR001040TIF_eIF_4E
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003743translation initiation factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006413 translational initiation
cellular_component GO:0005737 cytoplasm
molecular_function GO:0003723 RNA binding
molecular_function GO:0003743 translation initiation factor activity
Blast
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BLAST of TCONS_00071184 vs. Swiss-Prot (Human)
Match: IF4E3 (Eukaryotic translation initiation factor 4E type 3 OS=Homo sapiens GN=EIF4E3 PE=2 SV=4)

HSP 1 Score: 211.846 bits (538), Expect = 1.604e-62
Identity = 99/184 (53.80%), Postives = 127/184 (69.02%), Query Frame = 2 
Query:  131 LTLEDTEKLGIPLKTPWTFWYDRYKRNLSAAEYEANLKKIYTVRTVQGFWSVYNNIPPTGKIGL-ASYHLMRDDRRPLWEDEANIKGGYWKMRCPKNKTPLVWKELLLALIGEQFKDLISEADMIVGASVSIRDRDDILQIWNNRSVEASDAKVIKKLGELVPGLDVSGAFYKAHQAHENFESG 679
            L+    E  G+PL + WTFW DR     +AAE  +NLKKIYTV+TVQ FWSVYNNIPP   + L  SYHLMR +RRPLWE+E+N KGG WKM+ PK+ T  VWKELLLA IGEQF D  +  D ++G SVS+RDR+D++Q+WN  +    +A V++K+ EL+P +     FYK H+ H  FE G
Sbjct:   37 LSALQPEPGGVPLHSSWTFWLDRSLPGATAAECASNLKKIYTVQTVQIFWSVYNNIPPVTSLPLRCSYHLMRGERRPLWEEESNAKGGVWKMKVPKDSTSTVWKELLLATIGEQFTDCAAADDEVIGVSVSVRDREDVVQVWNVNASLVGEATVLEKIYELLPHITFKAVFYKPHEEHHAFEGG 220
The following BLAST results are available for this feature:
BLAST of TCONS_00071184 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
IF4E31.604e-6253.80Eukaryotic translation initiation factor 4E type 3... [more]
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