TCONS_00071171 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071171
Unique NameTCONS_00071171
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length847

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071171 ID=TCONS_00071171|Name=TCONS_00071171|organism=Clytia hemisphaerica|type=transcript|length=847bp
GTGAaagataaaattttcttaatgatAAGGAAAAGTTGAAGGTATTTTGA
GTTTTGGACTTGTAAAGAGACGGAATCTTagtgttgtttttttgttttta
cttaaAGATGTCAAATACTCAAGTCCAACAAAATagACCGTACGGCCTGA
TGGAGAAAGAATTAGAAGAGTACCGCAAATATTTTTGGCAGCAGGACGTT
GACGGAGACGGTCAACTATCAAAGAATGAATTCAATAACATGTTACGTAC
AATGGGTTTGAATCTTACTCGTCAAGAAGTTGAAAATTTATTCGCCAAAA
CTGACGTTGATAAAAATTACAGGATCAGCTTCCATGAGTTCGCCGAAGCC
TTCATTGCAAAGAAACGGGAACATGTGAGTGGCGATCGGCTACGACGCGT
CTTTCAAGAGGCCGATCGTGACCGTGATGGTTACCTGACAACAGATGAGT
GTTTGGCCGCTTTAAAACAACTCGGTCACGTAATGGATGATAAAGGCATA
CGACGTGTGATGGGTTTGATGGATAAGAATAATGACGGAATGATAACGTT
TCAAGaatTCTGCAAGTTCATGGCTTAGAGGTTGGAACGTTCGATGGAAG
GATTGGATTTTCATAAGCCAAAAGGGATGGCTTTTTTGTATATAGTTACT
TGTAAATGTGGTTAAAATTGTTTCAATAAAAGAAAGTCTTTAACTTCCAA
GCTTCTACTCTGGAACGCgtttaatgttttttaatgACACCCTATTCCTT
AGCTCTGGTTTAGTCGGCCCACTTTTAGCCCACTTTATGCCAACTCtagc
aattagaataggcagggctaAAAGTGGGCCGACTAAACCAGAGCTTA
Run BLAST on NCBI

transcript from alignment at scaffold_6:199705..210593-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071171 ID=TCONS_00071171|Name=TCONS_00071171|organism=Clytia hemisphaerica|type=transcript|length=10889bp|location=Sequence derived from alignment at scaffold_6:199705..210593- (Clytia hemisphaerica)
GTGAAAGATAAAATTTTCTTAATGATAAGGAAAAGTTGAAGGTATTTTGA
GTTTTGGACTTGTAAAGAGACGGAATCTTAGTGTTGTTTTTTTGTTTTTA
CTTAAAGATGTCAAATACTCAAGTCCAACAAAATGTAAGATATGCCACTC
ATACTCTAAGGTCCCGAATAGGTGGGGTCCGAATTTGTATCTCCAAAAAC
AGTAACGTAGACAGGAGGGGCGCAAAATTTGTGTAGAAGAGCAGATTTTT
ATGACACTGTAATTATCTTTTCATAATGTAAAAAGATAATTACAATGTCA
TAAAAATCTGCTCTCCTACACAGGTTTTGCGCCCCTCCTGTCTACGCTAC
TAAAAAACCCACAATGATAAGGTACTTATAAGCTACAACCAGGCTATTGA
TAGCAATTCAGCCTTTGATAGCTGAAAATATTTTCCAAAAGAAATTAACA
GCGGGTCCTAATAAGCATAGGCGTAGCAAGATACCCTGCAAAATTTATGG
ATGAGAGCGGTTTTTACGACACTGTGATTATTGTCTTTATTATATGTCAT
AAACGTCTGCACTCCCTCATAAATTTTGCAGGGTATCCTGCAGCGCCTAT
GATAAGAACGGGGACCTTTGAGTACTTTGTTATTTGACGTCAGAACAGAT
CAGTCGCGCTCTTCATTTTTTTTTAAATGGAGAATTTTTAATAAAATACA
AAAACATGAAAAAAACGACCAAATTTCAACAAAAAACGGTATCGCCTAGC
AGAATTTCAACAAGAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNAACCTTTGTAATAAACCAAACCAATGTATG
AGCGATTTATAGAGGCCCATGTGCATGCACGGTGGCCTGGAAATCTGTAA
AACATTATTATTATTATTATATTATGTTAATTTTCCTGATTTATTAAACA
ATCCTGAACCCATAGACGCCATCGGATGGACAATGGAATCCAAGGCGTTG
AGTTTAAAGCGTCAAAGCAGTTAGAAAGGAATCTTAAACCTTATTCTCAA
GCAAGAAAAAGTGAAGCCTAAATATTTGTGCCACATTTACAGCTAATAGA
AGGCGATTGTAATACATTCGATCAAAAGTACACCCTTACAGTGCATTTCC
AGGGTCTCGAAAAACCTTCCCTTAAGGGCGACACATGCCGTGGGTTGGAC
CTTATGAATGCCTCCCCCCGTCTGGGGAGCCTCCTCAACACGTCATAGCT
CAGAACCAACTTCACTTTCGGCTAATATCCCATTCTTGATCGGTGTTTGA
GGTTTGAGATGATGGAGATAAGACATGAGAAAATAAATTCATGTTAATAA
TTTTTCAATAATCCTTCCATTAATCATACTGCAGTAAATCGTGCAGTAGT
CCAACAACAAGTTTCTTACTTATGCTATCTCTTTCGTGAGAAGAATAGCC
AGCAGCAAGAGTAGCCATACCCTGGCCTCACTTTCGAATTCAGATCTATC
AGAAATGTGCTTTGTGTGTTATAACCGTACTCTCAGGTGCCTAATAAACG
GCCCTCGGACCTTATTAGAACCCCCCTCCCCGTTTATTACATTTGAAAAT
TTTCTCAGCTGTCAAAATAAGAATCCCTTATTGTACTTTAAAAAGCCAGG
TTCTTAGTCTGAAATTACCTAATTTGGGGTATTTAGAGGTATTATTTACA
ACCCCCCGTTTATTAGGCACCTGAGAGTATGCATTATAACAACCCAAATT
ATTGTATTTTTTTGCTAGTTGCCTGCCAACAATTCTCTTCAAGCCTTACG
AGCTTTTTGATAAAAATATAAATGACGGATTAAATGCACCCCCTTTTTTC
GTTTTTTAAGCGACATGTTTTTGAAATATGGCAATGGGTTTTTAACCTGG
TTGGTTACGCGTGAATTCATTTTCCACCTTAGAGTTTCAATTCTAGCCAT
TTCGGGGCTTTGAAATCAATGGTAATGACTAAATTAGCAGTTCCCAGGTT
ATCATATTCTCCTTTGGACATAGATAAAGAAAACATTTGGCATATTAACA
TTTATTGAATGCTAATTAAGAAGGTTGGATTAAATGATTATTCACGGCCT
ACCTCATACCACACTCCATTGAAGTCAATAGGTGTGTTAATCCTTCTCTG
TATGAATGAAGCTTAAGTGCAATCAATAAGAATTATATGTGCCCCGCAAA
GTAATTCTTGAACCCTAAGCATTTCTATAAGAATAAACTATATAAGAACA
TAAGGCTTCGAAGGCCAAAATATTCAGGACAGGTTAAAAACATTTTAAGG
CTTTGCGAACTCTAGAACATCGAATTTTTTAAAGAAATACTCAAAAATGG
TGAAATTAAGAACATGTTAAGAACATTTTTAGGTTCAAGACTCAAAAAGT
TAGGAACATCATAAGGCTCAAAAAATGTTGAATGCTCTTAGAAATGTCGA
GCGGGGCAAACGTTTTGTTTTGACCGGACGCCTGCATTTCGGATGCAAAA
GTTAATACCCTAATAGATTTCCATTACGGATTAATTGGTCTTGTTGTTTT
TATAGTATACTTTAATTAGACTTTTGTTGTTTTACTTATACTTTAATTAG
GGTTTTTGTTGCTTTGAAATATAAAGTTTATAATTTTTGTTTTTCATTTT
TGCTACGTTGTAGTATATATCAGTTTGAGATTGATTAAGTGTTGTTGTTA
GAGTTTTTTTTAATATTTTTTGGTTTATTCCTATTCCCTGATTCACAATC
CTTGGTATATTCCTTGTTGGGAAATTTGAATAGAGTCAAAGGTAGGTTGA
TTTGCGATTAATTTTTTGATAATATCCATTGCTAGGCGTCATTAAAAGGT
TGCCATGTTAGTGATGCATAAAATTGGCATAACATTTTTTGTCAGATTGT
TTTTTTTTTTATTAACCTGTAATTTATGATCACGGCCTCTTTGGTGCTCT
GTGATGGCTTTATTTTGTATCTGAGAAAATATATGGATCTTTCAATTCTG
GGTCATTTTGTATTGTTGAGCCATGGTAACCACATCTTGATAAGAATCTT
GAAATCATATATAAAAGGAACTGCATAGATATCAGATACTCATAATTTGC
TACACCACACTTATAAGTTTTTTTGCAGTGTCATTTTCGCAGTAGGAGAG
AGGCTTTCTTATTTTCTTCAACCTTGAGGCGAGAATGAAAAAATTAATGA
TGGTACAGTTGAATTTCTATAATTCGAACAAGCACGGGGAACTCAAATTT
GTTAGAGTTACTTATTTGTTAGAGGGTTTATAGGTAGGCTTTTCCTAATC
CGTGTACCCACTACGTACTCAGTTAGAGTTGAAGAAATTTTGGAGTTATG
AAGTAAAGTTTAATGACGCATTGTTAACTGAAGGGGCTAGAGAACTTATT
CGAGTTAAGGAGAAATTCGACTTGTAGAGGCTCGAAATATGGAGACTCTA
CTGTACGTATCTTTAGACAAGCCAGCAGGTGACAGGTGGCAGAAAACCTA
AAGCTATGTTAGTATCTACATCAGTTCTGATCTTTATATACTTAGACTAG
TAAACCACGTCGTTGCAGCTTACGCTTGCAAAGGGCTCATTACTTGGGCT
TTTGACACCACCCTCCCACAGCAATTTATCTTTTTATTATCTTTATTCAC
GCTTTTGTGTGTCTCAGTAAAGCCAGACGTTTGCTAGTCCATAAAAACTA
AGCTTTAGCTCACTGACTCAACAACAGTTTTCAAGCAGTTGGTAATAATA
AGTAGTCTAAATGCAAAGAAGGGCTTATTTTTCTGGGACATCTCCAGGTC
AGTCTCTTAAGGTTGTCTTGGTAGCTGATATCCACTAACGAATTTGTGCT
CCTTATATAAATTTACTGACTTCGTCTTTGCAGAGTCTGCAATTCAGACT
GTCTAGCTAAACCTGGTCGAAATGCGATTTCCTAGAATTACACCCCTGTC
TCACAGCCCCAGTGGAACTTCTTGCCACAGTGGGATGAAAATTTATATCA
AAATNCGATTTCCTGGAATTACACCCCTGTCTCACAGCCCAGTGGAACTT
CTTGCCACAGTGGGATTTTGAAAATTTATATCAAAATTCCAAAGGGGATA
TAAATTCTATTGTTCCTAGGTAAAAAACCATTCGGGATAGTTTTGGATTG
CAATTTTTCCCATTGTTTTTCAAATGGAGATGAGAACAATGCAATTTTCC
AATGGGCTGAACTTATAGGGTATTTTTCCCAACGAGAACAAAACATCTTA
GCCAAATTTTCAGTGGTTACGGGTCTGTGACACAGGGTTGTTTCATTCTC
CTTTGAAGAAAATACATGGAATACATCCGCATTCATTTAGATGGGTAGGA
GTATTTTATAGAGCTGTTTTCATTAAAGGCGATGAACATTTTTTAGACTG
CTGTGTATGCTCAAAGGCAGGGAGGAAAAAAATGACTTTGAAAAGAAGAA
AAACGGTTTTTCCTTTTTGTATTTTGAGTTTACTCACGAAGATTGCTGCG
ATTTTTTCCGTTTCCTATGAGAATGAGATACGAAAACTTCCTTTTTCCAT
AGTGCTTGTCGGTTATTGGAAATTTTTTTATATAAGAACGTTTTACGATA
TTTAAAAGAATTATTTAATAGGATTTATTGAGATTTCTTAGTGAAGATTT
CTAGGAAGCTTACAGAAATAACGTTTTAATGTGTCCCAACCTCAAACAAA
CAACATGGAAAATTTACTTGATATGATAAAGCTATATTAGTTGTACCTGG
TTGTGCTATAGGTCAAAGCCTTTAAACTTTGAGAGATTCTTTCCTGGAAT
GTCTGGTTTAAGTCTTAGTAAAGTAATCTTAGCCTGTGTTCTTACAAAAA
AGGAAATAATATTGTAAACGAATTGATCTTTTTCTTGAAAGAGAGTTTTC
ATGAGGTGTTGAATGAGAATCAAGTCTGAGATAGATAAAAATTTGAAGTA
ATATAAGCCAAAATTTGTTTTCAAGACGTATTTTTTCAGTCAAAAGAAGG
GGGAATATATAGCAATTGAAGAAAAAATGACAGTAATTATTTTCATTTTT
CCCAGCCTAACACACGACGTCATTTCGACGTACATCTAACGTCAGATTAA
CGTCATGGGCGTCAAATGGATGTTGCTTAAACGTTTTCTGTCTGAAAAAT
CCATATTTTCATATTTCGAACTAGCCTCTAAACCATTTACGTCATAAGTA
CCCACTTTCATTTTTTCATTGTCAACGTAATTCTGCGGTATAGGGGCTGG
GCTACCTTTATATATATATTTTCTGTTAGTCTGATCGAGGAAGGGAGAAA
CGATCTTTTTCTCGAGCAAAATAGACAAGAAAATGTTTGGGGTAAGGTTA
ATCAAAACTAACCTTTTATACATTTTTTAAAAAGGTGTTTCATTGTGAAA
AATATTCTTCGAGGATAAGAAGCAAAATGAAACAGCCGAATTATCCGGTC
GGGTATACTACGAAAAAGGTCTGCTATTTTTCGGCTGTATAAAGGTCGTA
ATCATTCTTGAAATTTTCGGAGAGAGGGGTTTTTTACTTTTCATGATTTT
CTTCTTTATTTTCTTTTTCTAGAGACCGTACGGCCTGATGGAGAAAGAAT
TAGAAGGTAGGTTTTTGTTTCCAAGTTTTTGTTTTTTGTTTGAGAGGATT
TTCATATACGGCTACAATGCTGTTTGATACTGATTTCTTAATTCGTCGTT
TCTCAAAATTCAATTTCGGGTGAAAACCGTAATTTCAGCTCTTCCACTTT
ATGTCATCGGGTTTTTTAATTTGGGAGGGGTTTATCGGCTTTCAGGCTAT
ATTCTAAATCTTATTGTATCATTTTAAAACTTTTAGATCATGAGATCCTT
AAGTCTTAAGTCTAATGTTAAAACTCAGAGTTAGAACTCTACTTTCCCAC
CATCAGTTAAAGCACTTAAAAATCACTTGCTTTTTTGAAATTCTGCCAAA
TATTATGATCTGCATTGTAGATAGAATATTTTACATATATATTTTACGTG
GATAGTTCAATAATCAAGGACCTTTTAGCCAGTCTATAACATCATCCACT
GCTAGCCGGTTCGGAATATTTATTAACTGAACGGAGCATTGGCTAGAGCG
GGAAACCGAGAACCCTTTAATTTGTGGTGCTGAAATCGTAGACAACATGG
CAATCTCTTCTTGATTCAAATCCTAGTCATTACCTTTAAAATTAAACTTG
CTAGCCTCCAGGGAAAGGTGTGACCTAGCTTTGAAACCTTTTTAAAGTGC
GCTAAAAGGATCATTGCATACACTAGATTGATGATTCCAAAAGAACGGTA
GCAAAGATTTTCTTTATTATCAAAATTCAATACGATAGTAGACAAATTCA
TTTATTTTCTCTATTTTTAGAGTACCGCAAATATTTTTGGCAGCAGGACG
TTGACGGAGACGGTCAACTATCAAAGAATGAATTCAATAACATGTTACGT
ACAATGGGTTTGAATCTTACTCGTCAAGAAGTTGAAAATTTATTCGCCAA
AACTGACGTTGATAGTATGTATCCCAGCTGGAACACAACGTTGTTTCAAT
GTTTATCTAACGTTAACGTCAACGTTAGATTAACGTTGAAACAACGTTGT
GTGCCAGCTATGTATTGATTCCTTTTTAGGGGGCTTTTTTACACCCCCCT
TCTCACAGACCCGGTGGGATTCTATCAGCTAGTGGGGTTAAAAATAACGG
TCAAAAACTCGATAAGGATTGATATTCCCATGTTTTTTATGGCTGGGGAT
TTAAATTCCATTGTTTTCTAGCCAGAAAATTCTGTGGGAATGGAAAAAAT
AGCACAATATTTTACAATTATCGTATCTCCGTTCGCAGTTTGTAATAATG
AACACTTAATGATTTTACTAGCGAGCACCTCACTAAAAACCGGGATTTTT
CATCATCAAAGTTCCACTTTGCCGATTTTCGAAAAATAAAAGCCTTTCAA
GTGCTTTGACGCAAATTCGATTATTTTGATACTGCAGGAGCTTCGAAAGT
TATAAGTGACGTCAAAAAATCGAATGTTTAGAGCCCGAAAACCTNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNAGCCCGAAAACCCGGGCTCAAAACATTCGAAAAA
GTCGCAAAGTGGAATAGACGTTAATTGCGTAAAAAAACGCGGGTGACGTC
TAGTATAGGCTAGAAAACCTGGGCTCAAAACATTCGAAAAAGTCACAAAG
TGGAATAGACGTTAGTTGCGTACAAAAACGCGGGTGACGTCTAGTATAGG
CTATGATTGTATATGGTATAAAAAAAACGGGGAGGATTGGCATGTGTCAG
TCTCGTCGCAATCGTGACGGGATCTTCTAAATAGACACAAGACAAGGACA
GGTCGATGACACTACTGCCTTGCCAAAGATGTTGTCCTCTTCTACTGCCT
TGCAATCATATTCTCTCTATAGAAGATATACAACTGTTGCTCTCTAAAAT
AGACTGACGCACCAGTCAGGCTAACATATCATGCGGGAATAGTGAGCGTA
GTAGGAAATTCTGTCGATGAGAGGTGCGCTTCGCACGAAAGTGGACATCG
GGCTTATCTGATATTCCGATGGCGCATTGGCGGCCGCCCACGCTAAAGCT
CTAAAGGAGCGGGCCAAAATTTTCCCGACCTTCAGAGCTTTAGCGTGTCG
GAAGAAAATTTCTCCATCGAGTACCAGATAAACATCGGGCTTAAGTTAGA
TCGCTTCCAAATAGTTTTTGGGAAGATTTCGTGGGAATTTCCCTACTTTC
TCAATTCATACCCACCTATTTTAACCCGTTCTCATGCGCAGTTCCTATTT
TACCAAAAACCCCACACAGCCCTCTAACATGGTTTAATTAATAGACTATT
TCGCTAGTCTCTAAAGATGTCAACTTCCAAAAGTGTTAAAGGGACTGAAA
AAAATAGTGTTTAATGTACGCCACTTGTTCTCTCTTATCTACCTGCAGAA
AATTACAGGATCAGCTTCCATGAGTTCGCCGAAGCCTTCATTGCAAAGAA
ACGGGAACATGTGAGTGGCGATCGGCTACGACGCGTCTTTCAAGAGGCCG
ATCGTGACCGTGATGGTTACCTGACAACAGATGAGTGTTTGGCCGCTTTA
AAACAACTCGGTCACGTAATGGATGATAAAGGCATACGACGTGTGATGGG
TTTGATGGATAAGAATAATGACGGAATGATAACGTTTCAAGGTACCTTAG
CATTTGTTTTCTTTTCATGTTACACATTTCTTTTAATAAAAACATCCAAA
TGTTCTTAACTTTTTGATTTTTAAACCAAATATTATTCTGATTTTCAGCA
TTTTGTGAAGATTTATATTTGATTTCTACAGTCTGTTTCATTAAGTTTAA
AGCCTGCAGGGTTAGAGTAGAATCTCTAACCTTTCCCAGGCAAAAAAAAA
AGTGAAGCCACTTATTTCCCATTCAGAATGTGCCTGGAACGCGTCGCAAT
CATGACGACAGATTGTATCTAGTGGTTCCTTTGTTTTTGAGGACTACATT
TTTTGAAATCTAGATCTTAATTTCAATCCAGCGTTTGTGTAAAAACCACG
CGTGGGCGTTCTGGATTGGAAATAAACGACTTCATTTCCTATCCAGGAGT
CTTGAGCCTAGCCCCTCGGGCTTAGAATAAGTCAATGGTTTGTACCTCTA
AAGAATCCTGCATTATAACACGCATGCGTAATTTGTCGTTCTTTAAACAT
ATGTAGTTAAACTGCGTGATAATCAAAGAGGAGTAAATTCGTACTTAGGG
GTGGACAAACTAACCGGGTCGGGGTTGGGTTATGGACGGCGAAATATGTC
ATATTTTGTGAAATATGTTGTTCTTTTTGTCTATTTTTAGCCAATGTAGG
ATTCTTTAAATTAAGCCTCTCATAAATCTTGTTTTCTTTTGTTTCAGAAT
TCTGCAAGTTCATGGCTTAGAGGTTGGAACGTTCGATGGAAGGATTGGAT
TTTCATAAGCCAAAAGGGATGGCTTTTTTGTATATAGTTACTTGTAAATG
TGGTTAAAATTGTTTCAATAAAAGAAAGTCTTTAACTTCCAAGCTTCTAC
TCTGGAACGCGTTTAATGTTTTTTAATGACACCCTATTCCTTAGCTCTGG
TTTAGTCGGCCCACTTTTAGCCCACTTTATGCCAACTCTAGCAATTAGAA
TAGGCAGGGCTAAAAGTGGGCCGACTAAACCAGAGCTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044235XLOC_044235Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071171-exon-scaffold_6-1575043694:210460..210593TCONS_00071171-exon-scaffold_6-1575043694:210460..210593Clytia hemisphaericaexon
TCONS_00071171-exon-scaffold_6-1575043694:203838..203871TCONS_00071171-exon-scaffold_6-1575043694:203838..203871Clytia hemisphaericaexon
TCONS_00071171-exon-scaffold_6-1575043694:202930..203073TCONS_00071171-exon-scaffold_6-1575043694:202930..203073Clytia hemisphaericaexon
TCONS_00071171-exon-scaffold_6-1575043694:200703..200945TCONS_00071171-exon-scaffold_6-1575043694:200703..200945Clytia hemisphaericaexon
TCONS_00071171-exon-scaffold_6-1575043694:199705..199996TCONS_00071171-exon-scaffold_6-1575043694:199705..199996Clytia hemisphaericaexon
TCONS_00071171-exon-scaffold_6-1510915933:210460..210593TCONS_00071171-exon-scaffold_6-1510915933:210460..210593Clytia hemisphaericaexon
TCONS_00071171-exon-scaffold_6-1510915933:203838..203871TCONS_00071171-exon-scaffold_6-1510915933:203838..203871Clytia hemisphaericaexon
TCONS_00071171-exon-scaffold_6-1510915933:202930..203073TCONS_00071171-exon-scaffold_6-1510915933:202930..203073Clytia hemisphaericaexon
TCONS_00071171-exon-scaffold_6-1510915933:200703..200945TCONS_00071171-exon-scaffold_6-1510915933:200703..200945Clytia hemisphaericaexon
TCONS_00071171-exon-scaffold_6-1510915933:199705..199996TCONS_00071171-exon-scaffold_6-1510915933:199705..199996Clytia hemisphaericaexon
TCONS_00071171-exon-scaffold_6-1491911889:210460..210593TCONS_00071171-exon-scaffold_6-1491911889:210460..210593Clytia hemisphaericaexon
TCONS_00071171-exon-scaffold_6-1491911889:203838..203871TCONS_00071171-exon-scaffold_6-1491911889:203838..203871Clytia hemisphaericaexon
TCONS_00071171-exon-scaffold_6-1491911889:202930..203073TCONS_00071171-exon-scaffold_6-1491911889:202930..203073Clytia hemisphaericaexon
TCONS_00071171-exon-scaffold_6-1491911889:200703..200945TCONS_00071171-exon-scaffold_6-1491911889:200703..200945Clytia hemisphaericaexon
TCONS_00071171-exon-scaffold_6-1491911889:199705..199996TCONS_00071171-exon-scaffold_6-1491911889:199705..199996Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:199705..210593 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.770296	0	8.24938e-05	0.841398	0	0	0.339874	3.87587e-08	36.5271	27.6497	9.45776	12.5843	14.0644	17.7469	3.71916	3.5987	0	0.843317	17.2674	21.8936	0	0	0	1.86145	3.94211e-06	0	0	0	0	0
Blast
[Close]
BLAST of TCONS_00071171 vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.008e-18
Identity = 40/143 (27.97%), Postives = 77/143 (53.85%), Query Frame = 3 
Query:  147 LMEKELEEYRKYFWQQDVDGDGQLSKNEFNNMLRTMGLNLTRQEVENLFAKTDVDKNYRISFHEFAEAFIAKKREHVSGDRLRRVFQEADRDRDGYLTTDECLAALKQLGHVMDDKGIRRVMGLMDKNNDGMITFQEFCKFMA 575
            L E+++ E+++ F   D DGDG ++  E   ++R++G N T  E++++  + D D N  I F EF      K ++  S + +R  F+  D+D +GY++  E    +  LG  + D+ +  ++   D + DG + ++EF + M 
Sbjct:    5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147
The following BLAST results are available for this feature:
BLAST of TCONS_00071171 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM34.008e-1827.97Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
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