TCONS_00071110 (transcript) - C. hemisphaerica

Overview
NameTCONS_00071110
Unique NameTCONS_00071110
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length107

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00071110 ID=TCONS_00071110|Name=TCONS_00071110|organism=Clytia hemisphaerica|type=transcript|length=107bp
GTGGACAGCTTGTAATAAGCTCAACAAAATCTGGCAATGTGATCTTGACA
ATAAcctcaagctgaaaattttcaagtgtCTTGTGGAGCCCATTCTTCTT
TATGGTN
Run BLAST on NCBI

transcript from alignment at scaffold_58:1225394..1225500

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00071110 ID=TCONS_00071110|Name=TCONS_00071110|organism=Clytia hemisphaerica|type=transcript|length=107bp|location=Sequence derived from alignment at scaffold_58:1225394..1225500 (Clytia hemisphaerica)
NACCATAAAGAAGAATGGGCTCCACAAGacacttgaaaattttcagcttg
aggTTATTGTCAAGATCACATTGCCAGATTTTGTTGAGCTTATTACAAGC
TGTCCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044192XLOC_044192Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00071110-exon-scaffold_58-1491911889:1225394..1225500TCONS_00071110-exon-scaffold_58-1491911889:1225394..1225500Clytia hemisphaericaexon
TCONS_00071110-exon-scaffold_58-1510915933:1225394..1225500TCONS_00071110-exon-scaffold_58-1510915933:1225394..1225500Clytia hemisphaericaexon
TCONS_00071110-exon-scaffold_58-1575043694:1225394..1225500TCONS_00071110-exon-scaffold_58-1575043694:1225394..1225500Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_58supercontigscaffold_58:1225394..1225500 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071110 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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