|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00071019 ID=TCONS_00071019|Name=TCONS_00071019|organism=Clytia hemisphaerica|type=transcript|length=2508bp acagaaaaaaaaacaaaagataaataaataaacaaaaacacaTTGACGGC CACCCTTAGGGGTGAAGAACCACAACTACTATGGATCCATTCAAAAAACT TGCCCTTTTGAAGGCCAAAATGACCGGCATGAGTAGGGCCCAGATTGCGG AAGCCATCCGAAACATGACCCTGGGAATAAACCCAACAGAACAAGAGCCA GACCTTACTACACCACAAAATCAACCTTTGCAAGGACAGTCACAAAACGC TGCAGGTGGTTTTTCCTACACTATAGATAATATAACCAGACTGAAAAGAT ATCTGATCTTAGGTTCAGATAAAGCAAAATACAAGGGTGGCTCTCAAgca gaaaatattcaaaatattccaGTTGTTGAAGAACTTTTAAAGGAGGGTAA AGGAAAGGAGGTGATTGATTTGATCGTTCAGTTTGCTCGTGAAGCACGTA TCTCAAAAGAGGAGAACATTTTGATGGTATTACGTGATTGTATGATGTAT CAGGGAGATGCCATGTATGAAGATAGGACCATACAACGAGCTGCTTATGA CAGTATCGTCAAAATCTGTAATATCCCAACCAAGCTTTTCCGATTGATGG AGCTTTGTAAACCATGTTATCAAAATAATTGGAAGCCTTTAACCAAGCCA GTCAGTAAGACGCAACTTCGGAAGAAAGCAAAACAAGAGGCAAAACAAGC AGCTCAACAGCAGAATCAAAGGCCTTCCACCTCCACCGAAATCCCAGCTG CTCAACCACCGTCAGCAAAAGTGCCAGTTGAAACAtgtgaaattgttgaa gagggTGAACctccaaagaaaaagaaaaagaagatgaagaagaagaaaaa accaaAGGAACCCAAACCTCAAACAacgcaaaaattcaaaaaatcttcaA GTTGGGGACGTGCTAGACGGCGTGGTGTCGGCAATTTTTACACCGATTCA AGTAAAGATGCCAATCGATTGTTATTGTTGATGACGAAGTACAAACAACG TCATAATTGGAACCATGTTCAAACGTTGGGTTATTGTCATCCAAAAATGA CGGGAGACGaggaacaagttaaaaacatcgtCCTCCAGTATTGCACACGT GGCAAAGAAAAGTTGGACAAATATCTGGTCAAGAAAAAAATCGATGGGAA TCAACCAATGGACCCAATCACATCTCAAATATTACAACACATAAAAGTTC TTGAGGAAGTCAAGAACCTGAAACCGGATGTCCCGGCCGATGTGGAGAGA TTGCTGCAATTGTTGCACCAATACGGTATTCGGGAGGTGCCACAAGAATT TGAGGTTGACGCTGCAGGTCAAATGGTACAAGTGGAAAACACTCAAcgta aaaaatgttcttttcaaCTGACCAGGGAGCATTTACCAAATGGCTTCCAA AAATTGAAGGAGGTTTGGGTGGCTCTACTTCAAGACATGCCCATGACAGC CATGATCAGGAATCTCGGCAAAATGACCAGCCTTGGGCTCTTTGATGAAT CAGCAAACAGAGAAATTGTCAAGAAGGTTTTAGGGGATGGCTCTATTTTG AACAAAGCAAGAATTCACCCAGTCAAGATTCTGTTAGCATCAAAGATGTA TGAGCAAGGCAATGGTGATCAAGGGCAAAgccatcaacaacaacaaaaaa atcaaacaatgaGTCAATCAACCAAAGAACCACTTACTTGGAGACCAAAC GCTGAAATCTCCAAAGCTCTCAATGATGCTTTCTACTTAAGTTTCAGACA ACCCGGCAAGAATTCTTCATTCCGTACGGACAAAAAGTTCATGTTAAATC TAGATGTTAGTGACTCTATGGATTGGGGTAACTGTGTAGGGTGTGATTTC CTGACGCCCGCTGCCGCCTCTTTCGCCCTGGCCATGATTACGATGAATGT TGAGCCACATTGTAGTGTGTTCGCTTTCGGGGGAACGCTTCAAAATATCG ATCATTTATTGAAGAAGGATATGACCATCCTTGAAGCCATTCAAGTGGGA CGCTCTCTCAATTTCGGTGCAACAGACTGTGCTCTACCAATGGTGCACGC CACGCAGAACAGGCTGGATGTGGACGTTTTCATCGTTTACACTGACTCCG AAACTTGGATTGGAAAAGTTCATCCTTCTGAAGCTTTAAAGAATTATCGG CAAAAGATGAACAAACCGGATGCCAAACTCATCGTCATGGCAATGAAGGT GAATGATTTCACGATCGCCGATCGACTCGATCGCGGTATGTTTGACATTT GCGGATTCGATTCTAACGTACCTGATATGATCTGCGAGATCGCCAGAGGA AACATTTCTTAAAATCACCAAACAAAGAGAAATGAAATCTAAACTTTTCT GGTTAGCCTTCGTTTACATGGCTCTAGCTGCTTGTGAATTTGGTGCTGGT GGTCTTAACATTCTATCAGGAAAAACGGAATTGATACATTATCAACCAGC AAAGAGAACGACCAACCTTGACTTATTGCAGGGTTCTTGGATTACTGGAC AGGTGGGT Run BLAST on NCBI transcript from alignment at scaffold_58:1028917..1036772- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00071019 ID=TCONS_00071019|Name=TCONS_00071019|organism=Clytia hemisphaerica|type=transcript|length=7856bp|location=Sequence derived from alignment at scaffold_58:1028917..1036772- (Clytia hemisphaerica) ACAGAAAAAAAAACAAAAGATAAATAAATAAACAAAAACACATTGACGGC
CACCCTTAGGGGTGAAGAACCACAACTACTATGGATCCATTCAAAAAACT
TGCCCTTTTGAAGGCCAAAATGACCGGCATGAGTAGGGCCCAGATTGCGG
AAGCCATCCGAAACATGACCCTGGGAATAAACCCAACAGAACAAGAGCCA
GACCTTACTACACCACAAAATCAACCTTTGCAAGGACAGTCACAAAACGC
TGCAGGTGGTTTTTCCTACACTATAGATAATATAACCAGACTGAAAAGAT
ATCTGATCTTAGGTTCAGATAAAGCAAAATACAAGGGTGGCTCTCAAGCA
GAAAATATTCAAAATATTCCAGTTGTTGAAGAACTTTTAAAGGAGGGTAA
AGGAAAGGAGGTGATTGATTTGATCGTTCAGTTTGCTCGTGAAGCACGTA
TCTCAAAAGAGGAGAACATTTTGATGGTATTACGTGATTGTATGATGTAT
CAGGGAGATGCCATGTATGAAGATAGGACCATACAACGAGCTGCTTATGA
CAGTATCGTCAAAATCTGTAATATCCCAACCAAGCTTTTCCGATTGATGG
AGCTTTGTAAACCATGTTATCAAAATAATTGGAAGCCTTTAACCAAGCCA
GTCAGTAAGACGCAACTTCGGAAGAAAGCAAAACAAGAGGCAAAACAAGC
AGCTCAACAGCAGAATCAAAGGCCTTCCACCTCCACCGAAATCCCAGCTG
CTCAACCACCGTCAGCAAAAGTGCCAGTTGAAACATGTGAAATTGTTGAA
GAGGGTGAACCTCCAAAGAAAAAGAAAAAGAAGATGAAGAAGAAGAAAAA
ACCAAAGGAACCCAAACCTCAAACAACGCAAAAATTCAAAAAATCTTCAA
GTTGGGGACGTGCTAGACGGCGTGGTGTCGGCAATTTTTACACCGATTCA
AGTAAAGATGCCAATCGATTGTTATTGTTGATGACGAAGTACAAACAACG
TCATAATTGGAACCATGTTCAAACGTTGGGTTATTGTCATCCAAAAATGA
CGGGAGACGAGGAACAAGTTAAAAACATCGTCCTCCAGTATTGCACACGT
GGCAAAGAAAAGTTGGACAAATATCTGGTCAAGAAAAAAATCGATGGGGT
AACGATATTTCATTCTTTTCTATTTCATTTTTTAAAAATTTGTAAGAAGA
GATGTGATAATTTCATCACTGTCTGTGTAGTGTAGGGAAAAGTTTTCCCA
AATCTCCAATTCTTTACTTACACAACATTTAAACAAAAGAAAGAACAACC
CCATTTTCAGAGCTGCGCGAGCACAAATTTTGAGAAATTCTTTTGTTTGT
TATACTTTTTCCGCAAAGAGGCTTCTTATTAAAAAAGAAGATCCTTAATA
TTTCCACTACCGTCCCTGCGCACTTCCGGGAGGTAATCGAAAAAGGTTGA
ATCCAAATGCAGCACCATAAAAGCTTTTCGGTACCATACCGGATCCAAGT
TTAGTAAATATCATGAAATTTTTCACATTGATAACAAGGTTTTCTTAATT
TTTGGACTTTCTTTCAAGAATCAACCAATGGACCCAATCACATCTCAAAT
ATTACAACACATAAAAGTTCTTGAGGAAGTCAAGAACCTGAAACCGGATG
TCCCGGCCGATGTGGAGAGATTGCTGCAATTGTTGCACCAATACGGTATT
CGGGAGGTGCCACAAGAATTTGAGGTTGACGCTGCAGGTCAAATGGTACA
AGTGGAAAACACTCAACGTAAAAAATGTTCTTTTCAACTGACCAGGGAGC
ATTTACCAAATGGCTTCCAAAAATTGAAGGAGGTAATAGTTGATCATTTA
AACAAAACTTAAACCGCTAATATACGGTTTTTTTCTATCCCGATCAGCCC
AAATAGATTTTCTGTTGATCGAAAGGTGATCTTTGAAAGCTTGACTAAAA
GCTCTTTTAATCGTAATTATATACAATTTCACTCTACTCAACAATACCAA
TCTTTCTCCATTGAAATTTTTAGGTTTGGGTGGCTCTACTTCAAGACATG
CCCATGACAGCCATGATCAGGAATCTCGGCAAAATGACCAGCCTTGGGCT
CTTTGATGAATCAGCAAACAGAGAAATTGTCAAGAAGGTTTTAGGGGATG
GCTCTATTTTGAACAAAGCAAGAATTCACCCAGTCAAGGTTTGCTATTTA
TTTAGAGTGATGGCCAAGGCGCATAAACCAGGGGCTCCCTGCATCTGTCG
ATAGTTATTTTTCAAGCCCTTTTAGTTTTGGCGCACGTTTTCTACACGAC
AATAATAGCTGCGTGTAAATTTATGGAAACAAGGCATATCTTTTTGCTTA
TTGGTGATATTTAACGTTAAATTTCGACAGTTTTACACTGCACCTTACAT
GAATGATCAAATACACGTTTTTTTTTAAGAAACTAGTTCTACCAAGCAGC
CTCAATGTTTCTTAAGAAATTTGCCATTTGAGCTTTAAAAATGTTTCTTA
CATGTTTCAAAATTTTTTGACATAATCAGCTTCATGGAAGGCTGGATTGG
AAGGATTTAAAAAAAAATGAATTAAAAAATGTTATTTTCTCATTCTCAGC
CTCAGCATGTTTCTTAGTTTTTAGGCATTCTGAGCCTCATGTTTCTTAAA
AGTGTGTTTCTTAAAAAAAAACCGTGTACCAACTATATATCCATGCAGGG
AAAATTAGAAAAGCAATGCACCGTGATTGAACCTGTAAGTAATGCACCGT
GATTGAACCTTGTTACAGATTCTGTTAGCATCAAAGATGTATGAGCAAGG
CAATGGTGATCAAGGGCAAAGCCATCAACAACAACAAAAAAATCAAACAA
TGAGTCAATCAACCAAAGAACCACTTACTTGGAGACCAAACGCTGAAATC
TCCAAAGCTCTCAATGATGCTTTCTACTTAAGTTTCAGAGTAAGCTCTAT
TCTAGATATGCAGGCATGGTTAACATAGTCAAGCATTCTGCTATAACGAA
TTCCTATGGCTCGTGCGCTAGAGTTTCATTTATCATTTGAACTTTTATAT
ACTTGCTAAAATTGATTAGTTTTCTGGAGAATCTCTTTCATTATTTCCAT
AGCAACCCGGCAAGAATTCTTCATTCCGTACGGACAAAAAGTTCATGTTA
AATCTAGATGTTAGTGACTCTATGGATTGGGGTAACTGTGTAGGGTGTGA
TTTCCTGACGCCCGCTGCCGCCTCTTTCGCCCTGGCCATGATTACGATGA
ATGTTGAGCCACATTGTAGTGTGTTCGCTTTCGGGGGAACGCTTCAAAAT
ATCGATCATTTATTGAAGAAGGATATGACCATCCTTGAAGCCATTCAAGT
GGGACGCTCTGTAAGTCGACTTCACTATCAAGAAATCTTGTTTTAAATAT
TCTCATTTCTTTATTTCTTCGAACTTGGGCCTCACATAAAACAGAACATC
ATTCTTAGAACGTCAAAAATGTCTAATTCCGAATTCTATTTGAATCTTTC
TATAGTTCGAACTAATTCCCAGTCCCCATCAGCATCAATTTTCAATATTC
CCTTTCGACTTTGAATGAGCGAGACTAAAATATATACATTATCGGCCAAA
ACTTAGCCGGCCTCAATTATTAGTCGGCCCTAATTTTAGTCACATCATCA
AAATTTAGTCACTTAGGGTCGACTAAATTTTGGCCGATAAGGTATAAAAA
ATCGACTTCCATGTCAATAGCTTTATTCCGCAATTTTCTGTGCTTTCTCT
TTTTATCAGTTATGTCATCATGCCTCATTAAACTTAACTTAGGACATCCG
TATTATCTTTCAGCTCAATTTCGGTGCAACAGACTGTGCTCTACCAATGG
TGCACGCCACGCAGAACAGGCTGGATGTGGACGTTTTCATCGTTTACACT
GACTCCGAAACTTGGATTGGAAAAGTTCATCCTTCTGAAGCTTTAAAGAA
TTATCGGCAAAAGATGAACAAACCGGATGCCAAACTCATCGTCATGGCAA
TGAAGGTTTGTCTGTTCTCCACACGGCCCTGTAATGTAGTCTGTGCCTCT
AAAGAATCCTGCATTGTAACACACATGCTTAATTTGTCGNTTTCACGGCC
CTGTAATGTAGTCTGTGCCTCTAAAGAATCCTCCATTGTAACACGCATGC
TTAATTTGTCGTTCTTTAAACCATATATAGTTAATTCCCGTGATAAACAA
AGAGGAATGAATCTGTAGGGGTGGTACATGTCACTTTCGGTCGGGGCTGT
GGACGGCCAAATATGTCGATTTTTATGAAATTTGTCGTTTTTTTGTCTAT
TTTTAGTAATGCAGGATTCTTTAGATAAACCCCTCATGATATTATGATAT
CTCGTTATAAAAAGTGATGGCATCAATTCATTTCAGTCGGTTTCAATCCT
GTAAAACCTTAAAAACACACGGTGAATAGGTCATCAACTTCTAGTTATTA
GAATTCTGTAGATAAACCCTTTTCTTTTTCATTGTATTCGAACTTTTTGT
ATGACTTCCCAAGGGAATGTTGTGGTGCTTATAAAGACTTTTTTACAGGT
TTTGTAAGGGATTGTTGTGATGCATATAAAGACTTTTTTACAGGTTTTGT
ACGGGATTGTTGTGGTGAATATAAAGACTTTTTTACAGGTTTTGTACGGG
AATGATGTGATGCATATTAAAACTTTTTTACAGGTTTTGTACGGGATTGT
TTTGGTGAATATAAAGACTTTTTTACAGGTTTTGTACGGGATTGTTTTGG
TGAATATAAAGACTTTTTTACAGGTTTTGTACGGGAATGTTGTGGTGAAT
ATAAAGAGTTTTTTACAGGTTTTGTACGGGAATGTTGTGATGCATATAAA
GACTTTTTTACAGGTTTTGTACGGGATTGTTGATGGTGAATAAAAAGACT
TTTTTACAGGTTTTGTACGGGATTGTTGTGGTGAATATGAAGACTTTTTT
ACAGGTTTTGTACGGGATTGTTGTGGTGAATATAAAGAGTTTTTTACAGG
TTTTGTACGGGATTGTTGTGATGCATATAAAGACTTTTTTACAGGTTTTG
TACGGGATTGTTGTGGTGCATATAAAAACTTTTTACAGGTTTTGTACGGG
AATGATGTGATGCATATTAAAACTTTTTTACCTGTTTTTACAGGTTTTGT
ACGGGGTTGTTGTGGTGAATATAAAGACTTTTTTACAGGTTTTGTACGGG
ATTGTTGTGATGTATATAAAGAATATTTTACAGATTTTGTACGGGATTGT
TGTGCAGAATATAAAGACCTTTTTACAGGTTTAGTACGGTAATGTTGTAG
TGAATATAAAGACCTTTTTTACAGGTTTTATACGGGATTGTTGTGGTGCA
TATATATTTTATTTTATTGGACCTACCCCAGTGGAGGTCCTATAAATTAA
CCGTTGTATGTTCGTTCGTTCGTTACCAGCTTTTCTCGAGATTGGCTCAT
TAGTTTTTTCTGATTTTTTGCACAAAGATGCATAACTATAAACCCTCGAA
TGTGACGGAGCCCGATTTTCGAAAAAAAAAATTTTTAGGCAAATTTGGGC
CAAAAAACGACTAAAAACAGGTTTTTTGGACTTTGTGAAAAATTGGATCA
TTAATTTTTTCTGATTTTTTGTAGGATAGTAGGGTATCATCATAGGTGAA
AGATGGCTCAAGCAGATTTTTGCAAAAAAAATTTATTGGCTTAAAAAACG
CATGTTTATCTATAAGAATCAATATTAATAAGCATACATCAATGTTCTTA
GTCAAATTACTAAATTTTATTATTTTTTTACCTTTGGTTGCTTGGCGTGT
TTTTGTAGAAAAACTGGCCAAATTCGATATTTTTTTATAAGCACATTATC
AATTACTTAGGTATTAGCTTTTCTCGAGATTGCCTGTTTCATTCTTTATT
ATTTTTGCACAAAGATGCGTAACTATAAACCCTCGAATGTGACGGAGCCC
AATTTTCGAAAAGAAATGTTTTTGGGCAAATTTTGGCCAAAAAACGGGTT
TTTTGGACTTTAAAAAATTGGATCATTAATTTTTTCAAATTTTTTTGAAT
GAAAATAGGTAAAAGATGGCTCAAGCAGATTTTTGTAAAAACGAATTTTT
TTAGCTCGAAAAACGCATCGTTATCTATAAGAATCACTATTAATAAGCAT
ACATCAATGTTCTTAGTCAAATTACTCAATATTTTGATGAGATCGATGTG
TTTTTTTGCTCACGAAGTCTTGAATATGAAAGAATATTTATAGAGCATGA
AATTTTGGTTTCTAAACGGTTTTTTATAAGAAACAAACGATTAATTNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTGTTTTATTT
TATTTTTATTTTCCAATTTATTTAACGTTGGGCTGACATCGTTATAATTA
AAAATACTAATTAATACCAACTATATAGAATACAATATAGTATAGAATAA
TAAATTTAAAATTTTTTTTTATGTGTATATTTTACAATGACAAATATTTG
TAAGATTTAGTTTTTCTTTCAGACTTTTTTTTTACAGTTTTTGTACGGGA
TTGTTGTGGTGAATATAAATACCTTTTTTACAGGTTTTGTACGGGAATGT
TGTGGTGCATATAAAAACTTTTTTTACAGGCTTTGTACGGGATTGTTGTG
GTGAATATAAAAACCTTTTTTACAGGTTTTGTACGGGATGGTTGTGGTGA
ATATAAAGACCTTTTTTACAGGTTTTTGTACGGGATTGTTGTGGTGAATA
TAAAGACTTTTTTACAGGTTTTGTACGGGAATGTTGTGGTGCATATAAAG
ACCTTTTTTACAGGTTTTTGTACGGGATTGTTGTGGTGAATATAAAAACC
TTTTTTACAGGTTTTGTACGGGATGGTTGTGGTGAATATAAAGACCTTTT
TTACAGGTTTTGTACGGGATGGTTGTGGTGAATATAAAGACCTTTTTTAC
AGGTTTTGTACGGGATTGTTGTGGTGCATATAAAAACTTTTTACAGGTTT
TGTACGGGAATGATGTGATGCATATTAAAACTTTTTTACCTGTTTTTACA
GGTTTTGTACGGGATTGTTGTGGTGAATATAAAGACTTTTTTACAGGTTT
TGTACGGGATTGTTGTGGTGCATAGAAAGACTTTTTTTACAGGTTTTGTA
CGGGAATGTTGTGATGCATATAAAGACTTTTTTACAGGTTTTGTACGGGA
ATGTTGTGGTGAATATAAAGACTTTTTTACAGGTTTTGTACGGGAATGTT
GTGGTGAATATTTATATTGTATCTGTGTGAAATCAAGTGCGTATTGTATC
TGTATTGGTGAATATAAAGACTTTTTTCTTTTCTCCATTTTTCAAGGTGA
ATGATTTCACGATCGCCGATCGACTCGATCGCGGTATGTTTGACATTTGC
GGATTCGATTCTAACGTACCTGATATGATCTGCGAGATCGCCAGAGGAAA
CATTTCTTAAAATCACCAAACAAAGAGAAATGAAATCTAAACTTTTCTGG
TTAGCCTTCGTTTACATGGCTCTAGCTGCTTGTGAATTTGGTGCTGGTGG
TCTTAACATTCTATCAGGAAAAACGGAATTGATACATTATCAACCAGCAA
AGAGAACGACCAACCTTGACTTATTGCAGGGTTCTTGGATTACTGGACAG
GTGGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00071019-exon-scaffold_58-1575043694:1035625..1036772 | TCONS_00071019-exon-scaffold_58-1575043694:1035625..1036772 | Clytia hemisphaerica | exon |
TCONS_00071019-exon-scaffold_58-1575043694:1034941..1035204 | TCONS_00071019-exon-scaffold_58-1575043694:1034941..1035204 | Clytia hemisphaerica | exon |
TCONS_00071019-exon-scaffold_58-1575043694:1034585..1034749 | TCONS_00071019-exon-scaffold_58-1575043694:1034585..1034749 | Clytia hemisphaerica | exon |
TCONS_00071019-exon-scaffold_58-1575043694:1033834..1034004 | TCONS_00071019-exon-scaffold_58-1575043694:1033834..1034004 | Clytia hemisphaerica | exon |
TCONS_00071019-exon-scaffold_58-1575043694:1033413..1033670 | TCONS_00071019-exon-scaffold_58-1575043694:1033413..1033670 | Clytia hemisphaerica | exon |
TCONS_00071019-exon-scaffold_58-1575043694:1032768..1032959 | TCONS_00071019-exon-scaffold_58-1575043694:1032768..1032959 | Clytia hemisphaerica | exon |
TCONS_00071019-exon-scaffold_58-1575043694:1028917..1029226 | TCONS_00071019-exon-scaffold_58-1575043694:1028917..1029226 | Clytia hemisphaerica | exon |
TCONS_00071019-exon-scaffold_58-1510915933:1035625..1036772 | TCONS_00071019-exon-scaffold_58-1510915933:1035625..1036772 | Clytia hemisphaerica | exon |
TCONS_00071019-exon-scaffold_58-1510915933:1034941..1035204 | TCONS_00071019-exon-scaffold_58-1510915933:1034941..1035204 | Clytia hemisphaerica | exon |
TCONS_00071019-exon-scaffold_58-1510915933:1034585..1034749 | TCONS_00071019-exon-scaffold_58-1510915933:1034585..1034749 | Clytia hemisphaerica | exon |
TCONS_00071019-exon-scaffold_58-1510915933:1033834..1034004 | TCONS_00071019-exon-scaffold_58-1510915933:1033834..1034004 | Clytia hemisphaerica | exon |
TCONS_00071019-exon-scaffold_58-1510915933:1033413..1033670 | TCONS_00071019-exon-scaffold_58-1510915933:1033413..1033670 | Clytia hemisphaerica | exon |
TCONS_00071019-exon-scaffold_58-1510915933:1032768..1032959 | TCONS_00071019-exon-scaffold_58-1510915933:1032768..1032959 | Clytia hemisphaerica | exon |
TCONS_00071019-exon-scaffold_58-1510915933:1028917..1029226 | TCONS_00071019-exon-scaffold_58-1510915933:1028917..1029226 | Clytia hemisphaerica | exon |
TCONS_00071019-exon-scaffold_58-1491911889:1035625..1036772 | TCONS_00071019-exon-scaffold_58-1491911889:1035625..1036772 | Clytia hemisphaerica | exon |
TCONS_00071019-exon-scaffold_58-1491911889:1034941..1035204 | TCONS_00071019-exon-scaffold_58-1491911889:1034941..1035204 | Clytia hemisphaerica | exon |
TCONS_00071019-exon-scaffold_58-1491911889:1034585..1034749 | TCONS_00071019-exon-scaffold_58-1491911889:1034585..1034749 | Clytia hemisphaerica | exon |
TCONS_00071019-exon-scaffold_58-1491911889:1033834..1034004 | TCONS_00071019-exon-scaffold_58-1491911889:1033834..1034004 | Clytia hemisphaerica | exon |
TCONS_00071019-exon-scaffold_58-1491911889:1033413..1033670 | TCONS_00071019-exon-scaffold_58-1491911889:1033413..1033670 | Clytia hemisphaerica | exon |
TCONS_00071019-exon-scaffold_58-1491911889:1032768..1032959 | TCONS_00071019-exon-scaffold_58-1491911889:1032768..1032959 | Clytia hemisphaerica | exon |
TCONS_00071019-exon-scaffold_58-1491911889:1028917..1029226 | TCONS_00071019-exon-scaffold_58-1491911889:1028917..1029226 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_58 | supercontig | scaffold_58:1028917..1036772 - |
Blast
BLAST of TCONS_00071019 vs. Swiss-Prot (Human)
Match: RO60 (60 kDa SS-A/Ro ribonucleoprotein OS=Homo sapiens GN=TROVE2 PE=1 SV=2) HSP 1 Score: 229.18 bits (583), Expect = 4.895e-65 Identity = 159/464 (34.27%), Postives = 243/464 (52.37%), Query Frame = 3
Query: 903 WGRARRRGVGNFYTDSSKDANRLLLLMTKYKQRHNWNHVQTLGYCHPKMTGDEEQVKNIVLQYCTRGXXXXXXXXXXXXIDGNQPMDPITSQILQHIKVLEEVKNLKPDVPADVERLLQLLHQYGIREVPQEFEVDAAGQMVQVENTQRKKCSFQLTREHLPNGFQKLKEVWVALLQDMPMTAMIRNLGKMTSLGLFDESANREI--VKKVLGDGSILNKARIHPVKILLASKMYEXXXXXXXXXXXXXXXXXXXXXXTKEPLTWRPNAEISKALNDAFYLSFR--QPGKNSSFRTDKKFMLNLDVSDSMDWGNCVGCDFLTPAAASFALAMITMNVEPHCSVFAFGGTLQNIDHLLKKDMTILEAIQVGRSLNFGATDCALPMVHATQNRLDVDVFIVYTDSETWIGKVHPSEALKNYRQKMNKPDAKLIVMAMKVNDFTIADRLDRGMFDICGFDSNVPDMI 2282
WGRA R+ + ++Y + K L L +TKYKQR+ W+H L H K + + IV +Y T+G +++ + + + + T ++L++++ +E+VK + ++ ++ L+ ++ +L REHL K KEVW ALLQ+MP+TA++RNLGKMT+ + E N E+ V + L + +L KARIHP IL+A + Y+ G+G + L WRP+ EI KAL+ AFY +F+ +P T K+F+L +DVS SM+ V L + + A+ M+ E V AF + + + DMT+ + + + G TDC+LPM+ A + DVFIV+TD+ET+ G VHP+ AL+ YR+KM+ P AKLIV M N FTIAD DRGM D+CGFD+ D+I
Sbjct: 144 WGRALRKAIADWYNE--KGGMALALAVTKYKQRNGWSHKDLLRLSHLKPSSEG---LAIVTKYITKGWKEVHE------LYKEKALSVETEKLLKYLEAVEKVKRTRDEL-----EVIHLIEEH------------------------------RLVREHLLTNHLKSKEVWKALLQEMPLTALLRNLGKMTANSVL-EPGNSEVSLVCEKLCNEKLLKKARIHPFHILIALETYKTGHGL------------------RGKLKWRPDEEILKALDAAFYKTFKTVEP-------TGKRFLLAVDVSASMN--QRVLGSILNASTVAAAMCMVVTRTEKDSYVVAFSDEM--VPCPVTTDMTLQQVLMAMSQIPAGGTDCSLPMIWAQKTNTPADVFIVFTDNETFAGGVHPAIALREYRKKMDIP-AKLIVCGMTSNGFTIADPDDRGMLDMCGFDTGALDVI 530
The following BLAST results are available for this feature:
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