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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070985 ID=TCONS_00070985|Name=TCONS_00070985|organism=Clytia hemisphaerica|type=transcript|length=1531bp
ctttattttatttgacgGTATCAACAATTCCAGACTATACACAGAGAAca
tgatatataaaaaaatgtcgTAAATCTTATGTCGtttcaaaaaaatggtt
tttagaTTAGGAAAGTTTACTAAATTTGTTTCAATTTACAGTGcatgtca
aaaagaaaaatctttgtgGTTCAAGCTTTTCATAATGCAAACTGAGATTC
CGCCTCTCTCGAAAACACATCCTTCACGACAGATTTACATCAACAAAACG
AAAAATAGAGAAATTAGACTTGTATAAAAACTTAAAACATCATTGTAATA
AAAAGGTATATACAATAAAGATCAACAATAAAACATAGAgaagtaaaaac
aatgaaaatatcttgaccaaacttaaaaaattgcgtcccaaaatattctt
taaataaCAGACTGTTTAAGTTTGTGGGCAAATCTTTGACGGGATACTCA
Agagaaaagtgaaaagtcaaactggtcaaacagaaaaacaatctggaaaa
aagtaaacaaaagccCAAGATGCTAACAAGAAGAATATTTTGTGACAAGG
TTAAAGGCTGAAAATGTCGATgtccaaaatttggaaatagcTCATCCATA
CCGGAGCAATCGATTGATAACTCATCAGTCAAGTTAATCAAAGAATTACT
AATGATACGAGGTAGTATGGAAGCCAACCATTGCGATACCTTACTCAAAC
GAAGTCAAAGGTCCATTCTACTGTACCTTTGTCCGACACCGTCCGATAAT
TGCTTAAAATACTAACAATAATAATAGTAATTTAAAAAATACTGAGATTC
ATTAAAATAACGTTATGTATGTGAGGTAAACATAAAACAACGaaaaaact
ttattaaaaaaaaaaaacaccgaaaataatattaaaaaatttttcctttt
aatttGAATGCAATTTTTTTATGTGAGGGACTatcaaaattaaataaaca
atATGGGTCATCATTTCATAATTACGTCAACAACAGGGTTTGAGTCAAAA
CAATATGGCTATGCAACGCTATTGACCTCAATGTTAGGCTTTAGAACAGG
CCTCGACTCAGCAGCGATGTCAAGCGAATCAACTCCATTACTCAAAAGTT
CCACGGAAGAAGAATTGGAGGAAGAATTAAGAGAAGTGTTCAAAGAAGAA
TTTGctgcttcttcatttttatcagCTGTCCATGATCCATTCAGTGAGCC
GTTTATAGACGAATCCGGTGAACCTTCATCTGGTGAACCGTCATCCGGTG
AACCTCCATTGCTAGCGGTCGCTTCTTGCTGTGCGCGTAATTTGGCTTGT
TTCCGCGCGGCCACTAACCTAGAGCGCGCCTCTCGTTTGACTTTTTCGTC
ATCTATCGTCTTTGTTTTTGTCCTCGGTGATTTTCCGGTGGATTTGCGTT
TGCCTTTTGGGGTAGAGGAGCTTCCTTTCTTCGTGTCATCCTGAGATAAA
ATAATATCGGGAAAATGTGATTAGTAATGCGATTAGAATCAACTGTTTGT
TGAGACAACACAAACGTGTTTATTTCATCTA Run BLAST on NCBI transcript from alignment at scaffold_58:824373..826738- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070985 ID=TCONS_00070985|Name=TCONS_00070985|organism=Clytia hemisphaerica|type=transcript|length=2366bp|location=Sequence derived from alignment at scaffold_58:824373..826738- (Clytia hemisphaerica)
CTTTATTTTATTTGACGGTATCAACAATTCCAGACTATACACAGAGAACA
TGATATATAAAAAAATGTCGTAAATCTTATGTCGTTTCAAAAAAATGGTT
TTTAGATTAGGAAAGTTTACTAAATTTGTTTCAATTTACAGTGCATGTCA
AAAAGAAAAATCTTTGTGGTTCAAGCTTTTCATAATGCAAACTGAGATTC
CGCCTCTCTCGAAAACACATCCTTCACGACAGATTTACATCAACAAAACG
AAAAATAGAGAAATTAGACTTGTATAAAAACTTAAAACATCATTGTAATA
AAAAGGTATATACAATAAAGATCAACAATAAAACATAGAGGTAAAAACAA
TGAAAATATCTTGACCAAACTTCAAAAATTGCGTCCCAAAATATATTTTT
TTAAATAAGAGACTGTTTAAGTTTGTTTTTCTGGGCAACTCTTTGATGGG
ATACTCAAGAGAAAAGTGAAAAGTCAAACAGAAAAACAATCTGGAAAAAA
GTAAACAAAAGCCCGGGATGGGCTGGAGTTTTTACAAGATGCTTAACTGA
TTGGTTATTTTTAAACAATAGGAGTGACACGTTCTTTAGAAAGTAATAAA
ATCGTTTGTCTCAACATTTAATGACCAACAGAGTCAAAGAACTTGTAAAA
ACTCCAGCTTGACCCAAAAGCCCAAGATACTAACAAGAAGAATATTTTGT
GACAAGGTTAAAGGCTGAAAATGTCGATGTCCAAAATTTGGAAATAGCTC
ATCCATACCGGAGCAATCGATTGATAACTCATCAGTCAAGTTAATCAAAG
AATTACTAATGATACGAGGTAGTATGGAAGCCAACCNTTTATTTGACGGT
ATCAACAATTCCAGACTATACACAGAGAACATGATATATAAAAAAATGTC
GTAAATCTTATGTCGCTTCAAAAAAATGGTTTTTAGATTAGGAAAGTTTA
CTAAATTTCTTTCAATTTACACACTGCATGTCAAAAAGAAAAATCTTTGT
GGTTCAAGCTTTTCAAAATGCAAACCGAGATTCCGCTTCTCTCGAAAACG
CATCCTTCACGACAGATTCACATCAACAAAACAAAAAATAGAGGATGATT
AGACTTGTATAAAAACTTAAAACATCATTGTAATAAAAAGGTATATACAA
TAAAGATTAACAATAAGACATAGAGAAGTAAAAACAATGAAAATATCTTG
ACCAAACTTAAAAAATTGCGTCCCAAAATATTCTTTAAATAACAGACTGT
TTAAGTTTGTGGGCAAATCTTTGACGGGATACTCAAGAGAAAAGTGAAAA
GTCAAACTGGTCAAACAGAAAAACAATCTGGAAAAAAGTAAACAAAAGCC
CAAGATGCTAACAAGAAGAATATTTTGTGACAAGGTTAAAGGCTGAAAAT
GTCGATGTCCAAAATTTGGAAATAGCTCATCCATACCGGAGCAATCGATT
GATAACTCATCAGTCAAGTTAATCAAAGAATTACTAATGATACGAGGTAG
TATGGAAGCCAACCATTGCGATACCTTACTCAAACGAAGTCAAAGGTCCA
TTCTACTGTACCTTTGTCCGACACCGTCCGATAATTGCTTAAAATACTAA
CAATAATAATAGTAATTTAAAAAATACTGAGATTCATTAAAATAACGTTA
TGTATGTGAGGTAAACATAAAACAACGAAAAAACTTTATTAAAAAAAAAA
AACACCGAAAATAATATTAAAAAATTTTTCCTTTTAATTTGAATGCAATT
TTTTTATGTGAGGGACTATCAAAATTAAATAAACAATATGGGTCATCATT
TCATAATTACGTCAACAACAGGGTTTGAGTCAAAACAATATGGCTATGCA
ACGCTATTGACCTCAATGTTAGGCTTTAGAACAGGCCTCGACTCAGCAGC
GATGTCAAGCGAATCAACTCCATTACTCAAAAGTTCCACGGAAGAAGAAT
TGGAGGAAGAATTAAGAGAAGTGTTCAAAGAAGAATTTGCTGCTTCTTCA
TTTTTATCAGCTGTCCATGATCCATTCAGTGAGCCGTTTATAGACGAATC
CGGTGAACCTTCATCTGGTGAACCGTCATCCGGTGAACCTCCATTGCTAG
CGGTCGCTTCTTGCTGTGCGCGTAATTTGGCTTGTTTCCGCGCGGCCACT
AACCTAGAGCGCGCCTCTCGTTTGACTTTTTCGTCATCTATCGTCTTTGT
TTTTGTCCTCGGTGATTTTCCGGTGGATTTGCGTTTGCCTTTTGGGGTAG
AGGAGCTTCCTTTCTTCGTGTCATCCTGAGATAAAATAATATCGGGAAAA
TGTGATTAGTAATGCGATTAGAATCAACTGTTTGTTGAGACAACACAAAC
GTGTTTATTTCATCTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070985-exon-scaffold_58-1575043694:826399..826738 | TCONS_00070985-exon-scaffold_58-1575043694:826399..826738 | Clytia hemisphaerica | exon |
| TCONS_00070985-exon-scaffold_58-1575043694:824373..825563 | TCONS_00070985-exon-scaffold_58-1575043694:824373..825563 | Clytia hemisphaerica | exon |
| TCONS_00070985-exon-scaffold_58-1510915933:826399..826738 | TCONS_00070985-exon-scaffold_58-1510915933:826399..826738 | Clytia hemisphaerica | exon |
| TCONS_00070985-exon-scaffold_58-1510915933:824373..825563 | TCONS_00070985-exon-scaffold_58-1510915933:824373..825563 | Clytia hemisphaerica | exon |
| TCONS_00070985-exon-scaffold_58-1491911889:826399..826738 | TCONS_00070985-exon-scaffold_58-1491911889:826399..826738 | Clytia hemisphaerica | exon |
| TCONS_00070985-exon-scaffold_58-1491911889:824373..825563 | TCONS_00070985-exon-scaffold_58-1491911889:824373..825563 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_58 | supercontig | scaffold_58:824373..826738 - |
Blast
The following BLAST results are available for this feature:
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