TCONS_00070981 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070981
Unique NameTCONS_00070981
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1577

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070981 ID=TCONS_00070981|Name=TCONS_00070981|organism=Clytia hemisphaerica|type=transcript|length=1577bp
tcagtaaTCTTTCCAACTAAAATAAACGTCCACAATGTCTTCGAAAGGAA
TTTATGAGGCTGATGGCAAGAAATTTTTAGCCAATCATTTGAAAGCGGAC
ACTTTCGTCGCTCCATTGTTTGCTCATGTTGCAGAAGATACAGATTTGGA
AGAATTGGCAAAAACACATCCATGGCTGTTGGAAAAGaaaTTGGTGGTGA
AACCGGATCAAATGATCAAACGACGTGGCAAGCTTGGTTTATTGAAAGTG
AATACAGATTGGGAAGGAGTAAAAGAATGGCTGGCTGAAAAACGAGGGAA
AGAAACACAGGTGGGAAAAGTGTCTGGTTTGTTGAAGAAGTTCATCATTG
AACCATTCATCGAACATGACGAGAAAGAAGAGATGTATTTATGCATTTAC
ACGCAAAGAGACGAAGATGTGATTTTGTTCCACCACGAAGGAGGTATTGA
CATTGGAGATGTAGATTCAAAAGCTTTGAAAATGACCATACCTATCGATG
GAGAAACAAACACTGATGCCATCAAATCCACTCTCCTTTCCAATGTTGCA
CAAAGTGACCAAGACAGAGTGGCTGGGTTTATTTTTTCGATCTTTGACCT
CTACAAAGATTTGTTTTTCACCTACCTGGAGATCAATCCTCTTGTTGTTA
AGACGGACAGTATTTATGTTTTGGACCTCGCTGCAAAGATCGACCAAACG
GCAGAATTTTTGTGCAGTGCCAAATGGGGCAAGATTGGTTTCCCGCCACC
ATTTGGACGTGAAGCCTACCCTgaaGAAGCGTTTATAGCAGAGTTGGACG
CGAAGAGTGGAGCATCGTTGAAATTAACAGTGTTGAATAAAGCAGGCCGT
GTGTGGACCATGGTGGCTGGAGGTGGCGCCTCCGTCGTCTACAGTGACAC
CATCGCAGATTTGGGAGGAGGTGATGAAATGGCCAACTATGGAGAATACT
CTGGTGCTCCAAGTGAAACACAGACCTTTGAATATGCaaaaactattttg
aaattGATGACTGAAGGAGAACCACACCCTGATGgaaaagtttTAATCAT
CGGTGGAGGGATCGCCAACTTCACCAATGTGTCCGCTACCTTCGCCGGTA
TCGTGAAAGCTCTGCAACTTTACCAGCAAGAATTGATTCGCCACAAAGTG
AAGATTTTCGTTCGTCGTGGAGGTCCAAATTATCAAGAAGGACTGAGGAT
CATGAGGGAACTTGGAGCAACATTAGGAGTACCGATGCATGTTTTTGGCA
CAGAAACACACATGACAGCTATCGTGGGAATGGCTCTCGGGAAAACCGAA
ATTCCACGTACGTCAGTGTGCGATTCGAATGATGCAGCAAGTAAAATGTT
CTTCAATACATACGACGAATCAGCTCCAGCTTCAGGCAGTGGCACGCCCA
AACGAAAAGCCAGCAATGAATTGACATCCAGTCAGGAGAGTGACAAAAAG
AAACTTTGTAAAGCGAACAGTGGAGACTTTGTGATGGTGCAACATTCAGA
AACACCTCCCTCTGTTCTCTTCACAAAAGACACAAAAGCCATCGTTTGGG
GCCTTCAACACAGAGCTGTCCAGGTAT
Run BLAST on NCBI

transcript from alignment at scaffold_58:684218..691885-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070981 ID=TCONS_00070981|Name=TCONS_00070981|organism=Clytia hemisphaerica|type=transcript|length=7668bp|location=Sequence derived from alignment at scaffold_58:684218..691885- (Clytia hemisphaerica)
TCAGTAATCTTTCCAACTAAAATAAACGTCCACAATGTCTTCGAAAGGAA
TTTATGAGGCTGATGGCAAGAAATTTTTAGCCAATCATTTGAAAGCGGAC
ACTTTCNAATTGTAGAGAAGAGTTTGTTTATTTGCTCAAGATTTTGTCTC
AACAGGCCTTGTTGTTGTTATGATACTAAAAGTGTTCTTTTAAAGTTTCT
ATGAACACATGTTCACACTCAGATTTTTTTTATTGAATTTATGATAATTT
TCTATTTTTTTTTTCGTTTGTTTGAAGAGATTCTGATTTTCTTTTTCCAG
CAATCTTTCCAACTAAAATAAACGTCCACAATGTCTTCGAAAGGGATTTA
TGAGGCTGATGGCAAGAAATTTTTAGCCAATCATTTGAAAGCGGACACTT
TCGTCGCTCCATTGTTTGCTCATGTTGCAGAAGATACAGATTTGGAAGAA
TTGGCAAAAACACATCCATGGCTGTTGGAAAAGGTTTGCGGCTTTTTGTT
TCATGTTTGAAGAACTTGTAATGAGTCATTCATCAAGATGTCTTATATCG
TGTAGTTTCATTAAAGGGGTTTGTTATGAAACAATTTGATGTTTTTTTTA
CTTTAGAAATTGGTGGTGAAACCGGATCAAATGATCAAACGACGTGGCAA
GCTTGGTTTATTGAAAGTGAATACAGATTGGGAAGGAGTAAAAGAATGGC
TGGCTGAAAAACGAGGGAAAGAAACACAGGTACCAGATAATGGAACTTTT
GAGTACTATTTTCCCTTTAACATGGAATTTAAACTCGTGCAGAACAAGAC
ACCAATCATAAAAATTTGAGACACACTCCATCATATACTAGCGAGTTTAT
GTATTCGAGATAAATCGAGGGGGACGGTATAAAGCAAATTTGACATGACT
CCGAAATCACCGTCCACTTTGCTCGACAACGGTAAAAACACCAAAATACC
GTCATCTGTTTAGGTAAGCAAAGGCGATATAGAGCGGTACATCACTTATC
GACTTTGTTTTGTATCGATTTCACTTACTGTTGCCCTCGATATCCTCCGA
TACATAAACTCGGTACTGCGTAGAATCCCGAACGTCGTGTTTTGTTGTAT
TGTTATGTTGTATTTTGTAGGTGGGAAAAGTGTCTGGTTTGTTGAAGAAG
TTCATCATTGAACCATTCATCGAACATGACGAGGTAAGAGTACTTGTCAT
AACATACCTTTTATNGTCTGGTTTGTTGAAGAAGTTCATCATTGAACCAT
TCATCGAACATGACGAGGTAAGAGTACTTTTCATAACATACCTTTTATTA
TCTTGGTGCTTTTGCTGCACTGAGGAAGATTCATTTGATTGCAGCCAAAA
AGTCTTGCGCTGATAAAAAGACATTATTTTCTCTCTTTAGAAAGAAGAGA
TGTATTTATGCATTTACACGCAAAGAGACGAAGATGTGATTTTGTTCCAC
CACGAAGGAGGTATTGACATTGGAGATGTAGATTCAAAAGTGAGCAGATT
TACTTAAACTTCCTTAATGGAGATTTTAGCAAGGACTCGTTTGACAATTC
ACCAAGATTCATTTACTTTCTACGTATATCTTTATATTACCGAGTTTATG
TATGTGTGTTTTTCTGCGTCGGAGACGGTGTTATGCGCAGATATGTAATT
TTTGCGTAGATATGTAATTTCTGCGCATATATGTAATTACTTTGCGCAGA
TATGTAATTTCGAGCTGCGCAGATATGTAATTAAATTTCTGCGCAGATAT
GTAAAACACGACCTTAGTTATTTTTTGAAAAACTGTCTCGATTTTAACAT
TAATTTTTCAAAGTATTTAATCGCATTGTTCTTGGACTATGACAGACATT
TGGCGATTGTTGTTTTTCTTATAAGCATCATCTTTTAAGAAGCAAGTCAA
TATCTTTTTATCAAAGTGATATTGGCTTTCGGCGATTGGTTCTATCAAAG
CAACTAGGGGACAGTGCTAAGTGACTTATAAGCATCAACTTTATAAGAAC
ACAATTCATAACTCTTAAACCAATAGATAATAGCTTTTGGTGTTTGGTTT
TCGAATACAAACATAGGATAGTGCTTAAGCTAGAAATTCTTTTTTTCTTA
TAAGCATTAACTTTATAAGAACACAATTCATAACTCTTAAGCCAATGATT
ATTAGCTTTTGGCGTTTGGTTCTTTCAAAGCAAATATAGGATAGTGCTTA
AGCTAGAAATTCTTTTTTTCTTATAAGCATTGACTTTATAAGAACACAAT
TCATAACTCTTAAACCAATGATTATTAGCTTTCGGCGATTGGCTCTATAA
GCAACGAGGGGACTGTGCTAAATCAGAAAATTTTGTTTTTCTTATAAAGA
ACACAATTCATAATTCTCCAAACAATAGATATTAGCTTTCGGTGATTGGT
TCTTTCAAAGCAAACATAGGATTGTGCCTAAAAAAGAAACATTTATTTTT
CTCATAAGCATCAACTTTATAAAAACACCATTCATAACTCTTAAACCAAT
GATTATTAGCTTTCGGTGATTGGTTCTTTCAAAGCAAACATAGGATTGTG
CCCAAAAGAGAAACATTTATTTTTCTTATAAGCAACATTTTATAAGAACA
CAATTCATAACTTTTAAACAATATTTGTTAGCTATTGTTTGATAAATCAG
ATCTCTGAAAGCCTATTCCACTTAGAAAAAAACCCTTGTTCTTATAAAAT
TCTTATTAATTAATGTTAGATTTAGGAAAATTCCCTATTTCTTTCGATAG
AGCCGTTGTAGAATGCCAATTCCACTTAGAAAAAAAAATAATTCGTCTCC
TTTTAGATAGCTTAAAGTTGAATATTTTGCCTTAGTTTAATTTGTAAGAG
GGAAATAAAAAAGGCACGTTTTTTTAATATCTTTAACAATCAGTGTCAAT
AATCCCACTCTATTTCATTGTATAATTCAATCAAATATAATGACTTTGCT
CGTAGATCGAACCATGAAAAGGAAGTTTTTTTATCATAAATTAGTCCATG
TTTTGGTAGAGACAACCAATAGATATTTACTTTATCTCACTGTAATTTAA
AGAAATGCAATCCATATCTACAAAATCAATAAAGTTTACATAGATATGTC
GAATTATCGAAGATCTCATTATATTGTACTTNTCTACAAAATCAATAAAG
TTTACATAGATGCGAGAACTCGAGTCGAGGTTTATCGAAGATCTCATTAT
ATTGTACTTTTTTATTAGGTTGTACCGATAAGATAAATAGAAAATCCGAA
TCTTTTGCTTATACCTTGCTAGATGGTTCGCATTTTTTAAAAGAATTTGG
ATACTCTTTTTTTTTTTAGGTTTCAGCCTAAAGATATTCTTAACATGTTC
AGCCTTGTTAACTTTGTAATAACTACCGTATTTTTTCGAATAAACGCCCT
GGGCGTCTTTTTGATTTTAAGACTTTCAGGAGGGGTGTTTATTCGAGGGT
ATATACCATTCTACCAAGAGTTATTTGATTCTCATAAAGTAGTTACTTAT
AGGAAGAATTACTATGCTCATAATATTATACGCCTTCCCTTGTTTAATTT
GTAAGAACTAAATACTGAAAGGTATATGACCATCTATGAAAACTATCGAT
TTATTCTTATAAAATAGGTGCTTATAAGAAAAATAAATATGCTCATCTTA
TATGCGCCGCTCCTTGTTTACTTCGTAAGAACTAATTACCGAAGGGTATA
TCACCGTCTATTAAGAGTTATTAATTTAGTTCTTATAAAGTATATGCTTA
TAAGAAAAATGAATATGCTCATATTATGCGTCATCCCTTATTTACTTTGA
AAGAACTAATTACCGAAAAGTATATGACCGTCTATCAAGAAAAATTGCTT
TGATTCTTATAAAGTAGTTGCTTATAAGAAAAATTATAATGCTCATATTA
TGTGCCATCCCTTATTTACTTTGTAAAAACTAATAACCGAAGGGTAAATG
ACCGTCTATCAAGAATTATTGATTTGATTCTTATAAAGTAGTTGCTTATA
AGAAAAATGATAATGCTCATATTATGTGCCATCCCTTATTTACTTTGTAA
AAACTAACAACCGAAGGATATATCTCAGTCTATCAAGAGTTATTAATTTG
ATTCTTATGAAGTATATGCTTATAAGAAAAATGAATATACTCATATTATG
TGCCGTCCCTTGTTTACTTTGTAAGAACTAATTACCGAAAGGTATTATGG
CCGTCTATCAAGAGTTATTGCTTTGATTCTTATAAAGATGATGCTTACAA
GAAAAATAGTCATATTCATTTTAGGCGCTATTCCATGTTTGCTTTGAAAG
AACCAATCACCGAAAGCTAAAACTTAGTGGTTGAAAAGTTATAGATCATT
TTCTTATAAAGATGATGCTTAAAAGAAAAATAATTATTTTCATTTAAGGC
CCTCTTCTATTCCATTCAAAAGTTATGGATATTTTTCTTATAAAGTTGAT
GCTTACAAGATATTGCTTCTTGTATTTGATACCCTAAAATACCTAAGTCT
TAAAAAGGTAAAAGTAATGGTAAAAATCTATCAAGGGGGTACCATTGATT
TTAAAGATCGTCTTTTACATATCTGCGCAGAAATTTAATTACATATCTGC
GCAGCTCGAAATTACATAGTTGCGCAAAATAATTACATATTTGCGCAGAA
ATTACATATCTACGCAAAAATTACATATCTGCGCAGCTCGAAATTACATA
GTTGCGCAAAATAATTACATATTTGCGCAGAAATTACATATCTACGCAAA
AATTACATATCTGCGCACAACAACGGTAAGGTTCTAACTTTTCTACATCC
TGACTGACTGAGGACGACGGTAAGTCAACACTTTTACCCTTGGCAAAATT
GCAAATACATCAACTTGCTATTTGATTGCAAAGGGAAGCTCTTTACAAAT
AGTATGCATTCTTTTTACCATTCCCCACAACAGGCTTTGAAAATGACCAT
ACCTATCGATGGAGAAACAAACACTGATGCCATCAAATCCACTCTCCTTT
CCAATGTTGCACAAAGTGACCAAGACAGAGTGGCTGGGTTTATTTTTTCG
ATCTTTGACCTCTACAAAGATTTGTTTTTCACCTACCTGGAGATCAATCC
TCTTGTTGTTAAGACGGACAGTATTTATGTTTTGGACCTCGCTGCAAAGA
TCGACCAAACGGCAGAATTTTTGTGCAGTGCCAAATGGGGCAAGATTGGT
TTCCCGCCACCATTTGGACGTGAAGCCTACCCTGAAGTGAGTTTTTTTTT
TTTTTTTTGGCTATCAATTCGATTTTCAAAATCCCAAGTTTCATATTTGG
TTGTTATATAAACCCCTTTTTCTAACTTTTGCACTTTTGTTTGTTTCAGG
AAGCGTTTATAGCAGAGTTGGACGCGAAGAGTGGAGCATCGTTGAAATTA
ACAGTGTTGAATAAAGCAGGCCGTGTGTGGACCATGGTGGCTGGAGGTGG
CGCCTCCGTCGTCTACAGGTCAGTCACCTTTACCAAAACAAATTTTAACC
CTGTAACTTGCTAGTCAACCCATGAGTATTTTGTCGAAATTATTTTTACT
TAAAATCAAGGTCAACACTTCCCGGGTAAGACAATGAAATCTATTTTATA
AGTTTGATTATTTGAAACCATACGAAGCCTAATCTCTTCTTTACAGTGAC
ACCATCGCAGATTTGGGAGGAGGTGATGAAATGGCCAACTATGGAGAATA
CTCTGGTGCTCCAAGTGAAACACAGACCTTTGAATATGCAAAAACTATTT
TGAAATTGATGACTGAAGGAGAACCACACCCTGATGGTGAGATTACTTCA
TCTACCCGTTCAGACCTAAATTGTGCCGGGTTCTCAGAATTTTACATAAC
CTGCTTCCTCGAAAGCCAATTTTTAATCTTAAGATTTGTAACAGAGGTGT
ATTCAGGTGTATTGTGTATTTCGGTAAGAAAGATTGTTACTTCTTATGTG
GTCATCTAAAACGTGAACTGATGGAATACTTGAACTCTCTTCATTTCATG
GGTCCATCGTAAGAAGCTCTCTGTTATTGTGAGTAAGGTCTTTGTGAAAT
TATCGTGTTTTTCAAATGGAAAACTTTTTATTTTTCAGGAAAAGTTTTAA
TCATCGGTGGAGGGATCGCCAACTTCACCAATGTGTCCGCTACCTTCGCC
GTAAGTTCCTTGTATCTTATGTTCACTAATATTTTGTATTATAATGTCTT
GTGAGTAAATGGACCTAATATTCCAACAGATCCATTCTGCGCATACCACG
CTCTCGCTCTGCTCTAAAGGGATGTGGTGAATGTGATAATCTTACCTGGT
TGTCCAGCTAAAACATTCAAAGCTGCGTTGCTTTTTTCTTGAAAACGAAA
GCGATCAAGCAACTAGAGTGTTTATTTATTGTTTTTGTACATGATTGATA
GTTGATTCTGGTGCCTTGGTTTTTTGCTTCAGCTCAAAAGCTAATTTAAT
ATTCGTCCCAAATCTAGATGAAAAAAATCAAAGTGGTGCACCATCCAGAG
CGAATTCTCTTACGGAGCCATGGCATTTAGAGAGAATATGTGTCATGCTT
GGAGTATCGAAATCTGCTAGGAGATAACATGACTTTTAGACCATATTCAG
ACGTTACGGCTTCGTATCGCTCTGGTATGGTTTTCGCTACAGATAGGAAG
TGTTCATACTGATTTTGGAACGTTTCGGAGCAACGGAACGGAGGAGTTTT
GTTCCGATGAAAAAAGTGGAGCGAAACTGTTTCGATACGTTTTGCTTTGT
AACGTCTTCTTTTGACGTTCCGAATTTTGACACTCACACTTGTTTTGGAA
ACATTTCGTTTCGGAACGATACGGATCTGTAACGTCTGAACATGGTCTAA
ATTCTTAATGTTTATTTCCAGGGTATCGTGAAAGCTCTGCAACTTTACCA
GCAAGAATTGATTCGCCACAAAGTGAAGATTTTCGTTCGTCGTGGAGGTC
CAAATTATCAAGAAGGACTGAGGATCATGAGGGAACTTGGTAAGGTCCCC
TTTCTCGAAAACAACAACAACCATGCTCCTTCTTGCAGGGATAGTCACAT
GAAATCAGTTCTTTTAGACGTTTCGTTGTTCTTAGGTCCGACTCATTCAT
TACTCAAACCTTCATCTGTTTCTTCTTTGCAGGAGCAACATTAGGAGTAC
CGATGCATGTTTTTGGCACAGAAACACACATGACAGCTATCGTGGGAATG
GCTCTCGGGAAAACCGAAATTCCACGTACGTCAGTGTGCGATTCGAATGA
TGCAGCAAGTAAAATGTTCTTCAATACATACGACGTAAGGCTTTATTTTA
TCCCGTTGTCTAATTTCGGCTCTCAAAGAAAGTGTACTTTGTTACCTTAT
ATGGAAATATGATAAAGTAGAGCTTGCAAAGATTGACTCATACAGAATTA
TACAGAACTCTCAAAAATATTTTGCTATGAAATTCATGTTTATTTTTCTC
TGAACAGGAATCAGCTCCAGCTTCAGGCAGTGGCACGCCCAAACGAAAAG
CCAGCAATGAATTGACATCCAGTCAGGAGAGTGACAAAAAGAAACTTTGT
AAAGCGAACAGTGGAGACTTTGTGATGGTGCAACATTCAGAAACACCTCC
CTCTGTTCTCTTCACAAAAGACACAAAAGCCATCGTTTGGGGCCTTCAAC
ACAGAGCTGTCCAGGTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044115XLOC_044115Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070981-exon-scaffold_58-1575043694:691828..691885TCONS_00070981-exon-scaffold_58-1575043694:691828..691885Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1575043694:691403..691531TCONS_00070981-exon-scaffold_58-1575043694:691403..691531Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1575043694:691157..691279TCONS_00070981-exon-scaffold_58-1575043694:691157..691279Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1575043694:690703..690765TCONS_00070981-exon-scaffold_58-1575043694:690703..690765Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1575043694:690397..690495TCONS_00070981-exon-scaffold_58-1575043694:690397..690495Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1575043694:686650..686952TCONS_00070981-exon-scaffold_58-1575043694:686650..686952Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1575043694:686418..686536TCONS_00070981-exon-scaffold_58-1575043694:686418..686536Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1575043694:686100..686239TCONS_00070981-exon-scaffold_58-1575043694:686100..686239Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1575043694:685736..685797TCONS_00070981-exon-scaffold_58-1575043694:685736..685797Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1575043694:684897..685014TCONS_00070981-exon-scaffold_58-1575043694:684897..685014Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1575043694:684602..684753TCONS_00070981-exon-scaffold_58-1575043694:684602..684753Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1575043694:684218..684428TCONS_00070981-exon-scaffold_58-1575043694:684218..684428Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1510915933:691828..691885TCONS_00070981-exon-scaffold_58-1510915933:691828..691885Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1510915933:691403..691531TCONS_00070981-exon-scaffold_58-1510915933:691403..691531Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1510915933:691157..691279TCONS_00070981-exon-scaffold_58-1510915933:691157..691279Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1510915933:690703..690765TCONS_00070981-exon-scaffold_58-1510915933:690703..690765Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1510915933:690397..690495TCONS_00070981-exon-scaffold_58-1510915933:690397..690495Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1510915933:686650..686952TCONS_00070981-exon-scaffold_58-1510915933:686650..686952Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1510915933:686418..686536TCONS_00070981-exon-scaffold_58-1510915933:686418..686536Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1510915933:686100..686239TCONS_00070981-exon-scaffold_58-1510915933:686100..686239Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1510915933:685736..685797TCONS_00070981-exon-scaffold_58-1510915933:685736..685797Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1510915933:684897..685014TCONS_00070981-exon-scaffold_58-1510915933:684897..685014Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1510915933:684602..684753TCONS_00070981-exon-scaffold_58-1510915933:684602..684753Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1510915933:684218..684428TCONS_00070981-exon-scaffold_58-1510915933:684218..684428Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1491911889:691828..691885TCONS_00070981-exon-scaffold_58-1491911889:691828..691885Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1491911889:691403..691531TCONS_00070981-exon-scaffold_58-1491911889:691403..691531Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1491911889:691157..691279TCONS_00070981-exon-scaffold_58-1491911889:691157..691279Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1491911889:690703..690765TCONS_00070981-exon-scaffold_58-1491911889:690703..690765Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1491911889:690397..690495TCONS_00070981-exon-scaffold_58-1491911889:690397..690495Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1491911889:686650..686952TCONS_00070981-exon-scaffold_58-1491911889:686650..686952Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1491911889:686418..686536TCONS_00070981-exon-scaffold_58-1491911889:686418..686536Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1491911889:686100..686239TCONS_00070981-exon-scaffold_58-1491911889:686100..686239Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1491911889:685736..685797TCONS_00070981-exon-scaffold_58-1491911889:685736..685797Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1491911889:684897..685014TCONS_00070981-exon-scaffold_58-1491911889:684897..685014Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1491911889:684602..684753TCONS_00070981-exon-scaffold_58-1491911889:684602..684753Clytia hemisphaericaexon
TCONS_00070981-exon-scaffold_58-1491911889:684218..684428TCONS_00070981-exon-scaffold_58-1491911889:684218..684428Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_58supercontigscaffold_58:684218..691885 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
21.0817	22.803	17.8812	15.3543	17.3648	18.479	16.3794	20.249	34.2584	44.3176	17.6832	30.5319	11.3533	7.41927	20.2112	26.6238	20.4496	21.1455	3.8982	6.11618	11.2809	9.53807	10.2709	12.8387	11.8161	11.0754	5.86443	3.73276	9.49031	6.5767
Blast
[Close]
BLAST of TCONS_00070981 vs. Swiss-Prot (Human)
Match: ACLY (ATP-citrate synthase OS=Homo sapiens GN=ACLY PE=1 SV=3)

HSP 1 Score: 591.267 bits (1523), Expect = 0.000e+0
Identity = 296/522 (56.70%), Postives = 365/522 (69.92%), Query Frame = 2 
Query:   35 MSSKGIYEADGKKFLANHLKADTFVAPLF--AHVAEDTDLEELAKTHPWLLEKKLVVKPDQMIKRRGKLGLLKVNTDWEGVKEWLAEKRGKETQVGKVSGLLKKFIIEPFIEHDEKEEMYLCIYTQRDEDVILFHHEGGIDIGDVDSKALKMTIPIDGETNTDAIKSTLLSNVAQSDQDRVAGFIFSIFDLYKDLFFTYLEINPLVVKTDSIYVLDLAAKIDQTAEFLCSAKWGKIGFPPPFGREAYPEEAFIAELDAKSGASLKLTVLNKAGRVWTMVAGGGASVVYSDTIADLGGGDEMANYGEYSGAPSETQTFEYAKTILKLMTEGEPHPDGKVLIIGGGIANFTNVSATFAGIVKALQLYQQELIRHKVKIFVRRGGPNYQEGLRIMRELGATLGVPMHVFGTETHMTAIVGMALGKTEIPRTSVCDSNDAASKMFFNTYDESAPASGSGTPKRKASNELTSSQESDKKKLCKANSGDFVMVQHSETPP-------SVLFTKDTKAIVWGLQHRAVQ 1573
            MS+K I E  GK+ L   +   + +   F  A V  DTD   L + HPWLL + LVVKPDQ+IKRRGKLGL+ VN   +GVK WL  + G+E  VGK +G LK F+IEPF+ H + EE Y+CIY  R+ D +LFHHEGG+D+GDVD+KA K+ + +D + N + IK  LL +  +  ++ +A FI  +F+ Y+DL+FTYLEINPLVV  D +YVLDLAAK+D TA+++C  KWG I FPPPFGREAYPEEA+IA+LDAKSGASLKLT+LN  GR+WTMVAGGGASVVYSDTI DLGG +E+ANYGEYSGAPSE QT++YAKTIL LMT  E HPDGK+LIIGG IANFTNV+ATF GIV+A++ YQ  L  H+V IFVRRGGPNYQEGLR+M E+G T G+P+HVFGTETHMTAIVGMALG   IP      ++ A      N          SG+    A +   S  ES   ++  A      M Q S   P       + LF++ TKAIVWG+Q RAVQ
Sbjct:    1 MSAKAISEQTGKELLYKFICTTSAIQNRFKYARVTPDTDWARLLQDHPWLLSQNLVVKPDQLIKRRGKLGLVGVNLTLDGVKSWLKPRLGQEATVGKATGFLKNFLIEPFVPHSQAEEFYVCIYATREGDYVLFHHEGGVDVGDVDAKAQKLLVGVDEKLNPEDIKKHLLVHAPEDKKEILASFISGLFNFYEDLYFTYLEINPLVVTKDGVYVLDLAAKVDATADYICKVKWGDIEFPPPFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAPSEQQTYDYAKTILSLMTR-EKHPDGKILIIGGSIANFTNVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMALGHRPIPNQPPTAAHTA--NFLLN---------ASGSTSTPAPSRTASFSESRADEVAPAKKAKPAMPQDSVPSPRSLQGKSTTLFSRHTKAIVWGMQTRAVQ 510
The following BLAST results are available for this feature:
BLAST of TCONS_00070981 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ACLY0.000e+056.70ATP-citrate synthase OS=Homo sapiens GN=ACLY PE=1 ... [more]
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