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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070963 ID=TCONS_00070963|Name=TCONS_00070963|organism=Clytia hemisphaerica|type=transcript|length=338bp
AAGAAGCAAGCAAGTTGGTGACTTAACTCAGAGTAAATAATTTTGCTGCT
TGGGAGCATCAATTCAAAATGATGAGAGGATTTTTATTGATCCTGTTCCT
TGTGAGTTTGCAGCAGATATCCATCTTTGCGACAACAACCGCTCCACCGA
CAACAACCCCTCAACCGACGACAACAACTTTTCCACCGACGACAACCATT
TCACCAAGAACCACTTCTCCACCGACGACAACAACTTTTCCACCGATGAC
AACAACTTTTCCACCGACGACAACAACTTTTCCACCAACGACAACATCTC
CACCGACGACAACAACTTTCCCACCAACGACAACATCT Run BLAST on NCBI transcript from alignment at scaffold_58:529524..532734- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070963 ID=TCONS_00070963|Name=TCONS_00070963|organism=Clytia hemisphaerica|type=transcript|length=3211bp|location=Sequence derived from alignment at scaffold_58:529524..532734- (Clytia hemisphaerica)
AAGAAGCAAGCAAGTTGGTGACTTAACTCAGAGTAAATAATTTTGCTGCT
TGGGAGCATCAATTCAAAATGATGAGAGGATTTTTATTGATCCTGTTCCT
TGTGAGTTTGCAGCAGATATCCATCTTTGGTAAGTAAGTTAGCCGACAAA
CCTGGCGATGAAAACCCGTTTGTTTTTTTAGCGTAATGACTTCACGTCAA
ACGAAAACGAAAGTCTATAAAACTTCATCGAGATTGTTAAAAGTGCGACT
CGAAATTCCATTTTATGAGCGTGGAAAAGACTTACTTAATGACTATATCT
TATTTTACAATTGACACCATGTTAGCCCAGAAAAAAGTATATCCTAGACT
AAATATATTTCAATTTATCTGCACTTTTGAATTCTTGCACTTGTTAATTT
CGCATAGCGAAAGTATTACGATAGGCTTTCGCGGCGGTGGTCGGTGAGGA
ATAAAGTTTAGAAAACGAAAGTAGTTGAAACTTCTAGAATATTCTCGAAG
GTTTAAAATATGGACTCACTTGCTAAGATAAAATCTAGCGTTTTGTTCCA
TCATTCCAGTGCACAAGTGCTAAGTAGGCGTAACCAAGGATTGGTAAACA
TTGCTCGTTTTTTTTAATGACAGATTTCAGCATGCTGTCAGACTTGCTTT
GGTTGTTTGTATTTTTATCATGTTTTTGGTGTTTTAAGAGTATTAAAGAG
GTTAATATTTCTTTTAGCATATACTATTTTATGTTTGTATAGTTAGTAAA
CGAGTCTGCTAAATCGCGTGCCACGCGTGCCAGCGTGCTTTGGTGTGCCA
ACGTGCCAGCGTGCCATCCAAATTTTGCGTACCATCCAAGTTTCGGCGTG
CCATCCGAATTTCGGCGTTTTCTTCAAGGGGTACATAGCAGGGATTCGAA
CCTAGGATCCATGGTTGGAGGTGTTAGTGTGAAGATGAGTCCTTAAAAAG
GAGGACCTCTTGCTCATTGTATTTCCCCTTATAATTATCTCATTATTAAT
TAGCGATCGGTGGTGATTGTTGGCAAGGTGTGAGTTGTGGAACATGCGGC
GGTTGGCAAGGCAGTATCAACGGTGTTCCCGTGTGCTGTGCCTACTGCGA
AAAGAGTGGAATGGCTTTAAGATCAACTTCTTGTAATTGCTTGCACAATG
GTAGGTTTTGTAACCACGTGACCATTTTTTTTGTGAATTACGTGAATTCT
TTATGTTTACATTCCAATTAGGCTGCACGCATCCCCTCAAATATGGGTTG
ATTTAGCAGATGCGTATTGTTTATAAAATCCGAGACTCCCCCTTCGTTGT
GTGTTTTAGCAACTTGATTAGCTTGATTGGGCTCTTCCAGAAAAAAACCA
TTCATGGGGGGTGGAGGATATATTGTCCAGGGGTATTGAAAAAAACCTGA
AAAACTGCCATGTCCATGGGGTGAATCAGCGATGTCCAGGGGTAAATATT
TGTGTCCAAGGGGTCAATTTGATGCTTGTCCAGAGGTAACTGCCATGTCC
AGGGGGTGAAAAATCGAAATGTCCAGGGGTAGATCAAAGAAAAAATAATA
TATCCTCCACCCCCCATGAACGAATTTTTTCTGGAAGAGCCCATTATGAA
GTTAATAGATTTTTAAATTTCATTAAAGATTTAGAGATAGCCAGAGGTTA
ATACAATCATTACTTAGTTAGATTTTTAAACTTTTTTAAAGAAAATTGAA
ACAGGTTGCCCCAAATTTTGGGTAATTTTTGGACGGGGATTCTATATACG
ATTTAGCATCCCCTATATCAAAACATATCAGAGGGGATGCGTGTGGCCTA
CATTCTACTTTAAGAGACCAATGTTTTGTTTCGGAGCATTTTTAACGTAA
TCTGTACCAGGGTGTACCTCAACGTTTATCGTCCTCGAGTGCTACAAATT
CTTTTGTTGTTTCTGTTTTGTTTGCAATCAAACGAAGCGCTGTTTTTATC
TCAGGTGATGACAAGCCAGAAATAAGTGGTAACTCAACGATCATTGAAAA
TGAACAGCTGAAACTTAAATGTACTTCCATTTGGGGTCGGTCGTTTACTT
CATATAAATGGTTCCGCAATGGAATGGTTATCAATGGTGCAACAAATGAA
ATATATCAAACAATCAACTTCGAAAGAGACGGAGCTAGCAATTATTCTTG
CCAGGTTTCAAATGGTATTTTGAACAAGACCTCGGATAGTTTAACTGTCA
CAGCGTTATGTAAGTATATGTAAGAATATTTTTCATAACACCACTGAGTC
ACAGACCCACTGGGATCACAGCCCGATTGGAAAACAGGTACGATCTTCTT
TTTTTACAGGTAGAAATAGGTGTTTAAAGTTGATTAAGTTGTGTAAAATT
GATTTAGTTGTATAAGACAGATTATCAGTTACTAAATAGGAGGAATTTAC
GGCAGGGATTGTCAATCTAAGTGATAAAAGTTCTAAAGACCTTGATGTGA
TGTGTCATGTTGGATGAGCGCTGTGTGATACCGTATTTACCTACATGTTT
TTTATAAGAACAAACTTTATAAGAGCAAAAGGGTTCGATGGCCAAAATGT
TAACTGACTACTAAGCAATATATCAGTTTATTGGTGCACAAACATAAAAC
ACTATGCAGTAAATTAATAATAAAACACATGATAAACTACAGTAGCAAGG
AAAATTTCTCAAGCATGTGCAGCCGAAAAAAAGTTTTCTACAAACTTTTG
GTTACCTACCTTGAACTTGCTTATTAGGATTTCTAAATAGAGCGCTGATT
TCTTATCTTTGTGCGTGAGTCCCTCTTTAGAATATTCTATAATGTTCTAG
AAGAACATATGGAGACCATAAACACGAAGAACGAGTGTCGAGTGTTAATT
ATTAGCTCTTCTAAGAAAACCGTAGAAAACCGCGATGCGAAATTAACAAA
CAGGACAGAGCAAAAAACAAATAAATTACAAATGAATTTACTGAACCTTT
TAATGGTTTTATGACGGAAGATATAATCATATTTTCTTCTCTTGAACGTT
AGCGACAACAACCGCTCCACCGACAACAACCCCTCAACCGACGACAACAA
CTTTTCCACCGACGACAACCATTTCACCAAGAACCACTTCTCCACCGACG
ACAACAACTTTTCCACCGATGACAACAACTTTTCCACCGACGACAACAAC
TTTTCCACCAACGACAACATCTCCACCGACGACAACAACTTTCCCACCAA
CGACAACATCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070963-exon-scaffold_58-1575043694:532606..532734 | TCONS_00070963-exon-scaffold_58-1575043694:532606..532734 | Clytia hemisphaerica | exon |
| TCONS_00070963-exon-scaffold_58-1575043694:529524..529732 | TCONS_00070963-exon-scaffold_58-1575043694:529524..529732 | Clytia hemisphaerica | exon |
| TCONS_00070963-exon-scaffold_58-1510915933:532606..532734 | TCONS_00070963-exon-scaffold_58-1510915933:532606..532734 | Clytia hemisphaerica | exon |
| TCONS_00070963-exon-scaffold_58-1510915933:529524..529732 | TCONS_00070963-exon-scaffold_58-1510915933:529524..529732 | Clytia hemisphaerica | exon |
| TCONS_00070963-exon-scaffold_58-1491911889:532606..532734 | TCONS_00070963-exon-scaffold_58-1491911889:532606..532734 | Clytia hemisphaerica | exon |
| TCONS_00070963-exon-scaffold_58-1491911889:529524..529732 | TCONS_00070963-exon-scaffold_58-1491911889:529524..529732 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_58 | supercontig | scaffold_58:529524..532734 - |
Blast
The following BLAST results are available for this feature:
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