TCONS_00070872 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070872
Unique NameTCONS_00070872
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4498

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070872 ID=TCONS_00070872|Name=TCONS_00070872|organism=Clytia hemisphaerica|type=transcript|length=4498bp
CTTGGGTTTCAAAATGGCGGGAAATGTTGTGGAGTCACAAAATTTGATGG
CTGATCAAAATTTTTAGCTTCAAGTTTAGATAATTCACAATCACAAGCTT
TATTTTGATCATGGAATCAGAATTCAGAGTCAAGGAAACAAGAAAGCTTT
TggaagatttgaagaaaaattttcaatgtacAATTTGccTTGAATTGTTT
TCGCAACCTGTATCAACAAAATGCAACCACATCTTCTGTCAGTATTGTCT
AACGGAAATGATAGGCTCAAAGAAAAAGGCAAAGACAGCAAGATGTCCTC
TTTGCAACACCAATGTAAACAAAAgAGGCACACATAAGAATGAAGTGATG
GGAAGCCTTGTGTCGTCAGTTCGTGAATTATGCAATGCTTTTGAGGATGA
CTGTCAATCAGCAGgggTAGATGTTATGCCTTTATTATCACAGAGAGATC
CAGCTTCACAAAGGaaatttgaactACAAAGAAAAAGTAGTTTGGAAAAA
GTCAAGATGGACACACAGAAAAAGATTTCCctgtttgattttgatttaga
CCAATCCCAAGGCACAAGCTCCAACACAAGACCATCTCTTGGTCAACCAG
GGAAAAAATATTCTACCTGTACCGCTCACAATAGTTCTTCGGTCAAAAAC
TCTAAACAAGAAGAACAACAAAAAGAAGATAGGCGatcaaaaatcaacaa
caacaaaaagaagCCATCAAAATCTACGAAACAGAAATCTCCAACCAAGA
TGCGTAAACTCCAATCAGACAAAACTCCTATCAAAGACTTTGAATTTGAG
AAACCTTCTTCAACTACTAAAAAATTCTCCGACATTCAAGCATCAACATC
AACTGATGACTCAAATGAATATATCGCTTTACCAAATGTCAACAAAATCT
TCATTGACGATGATGTGCCTCCCATTCCTCAAGATCTTGGTGAAAATACT
TTGATTGATGAATCAATAAATCAAGAAGCTTGTGTTTCACCAGATAAGCA
TTCTTCTAAATCCATCGATAAAATAGATTCAGTTATACCTGATGCTACTA
ATACTGTGAATATGGAAGAGCTACCTGTAATAGAACAATTTGAGTCTGAA
CCTGATAGAGTTGATGAACGACTATCTAAAgtcaataaaaatgaaagtga
taaGAATGTCAAAACTGGGACTTTAAAACCTGAAACCTCAgaagaaaaac
tttcagaagaaaaactttcagagGTTGAACTATTTAGAACAAAATCTGAA
GATATACTTCAAATACAACCTGAAAATATAGATCCTGAACATATGGACCC
TGAACATATTGGACCTAAAATTCCTCAAAAACAATCACCTGAGCCTGAGC
TTGTGAAACAGAGAGTCAAAACTCCCTTCACAATACTGACAAAACGAAAT
ATTGgcaataaaagtgaaaaccaACCAGCACCACCAGCTGTAAAAACTGA
TATCCTCCATTCAGATGATAAACATGAACTCAATAATGATGTAGAAAAGA
ACcagaaaaataatattatagAAATGCCAGACAGAAAGGAGATGGAATCA
ATTAATATGGTTAGTCCTTTCAAACATTCAAAATCTGAGATTGAAAATAA
CGAGGCTGTAACAGCAAGGACTGATATTAAGTCAAATGAGATTTCTTCGC
CATTGAAAGTTAACAAATCAAGCCCCTCTCGGCATTTAGAAACTTCTCCC
TTCAAAAGCGATACAGAATGCTCTTTATCGGAGGGAAGTACTCCAACAAC
GCCCTCATCCGCAGATTATGCTGAAAAAGTGACTTCAATGTGGACAAAAT
ATGAAAGCCCGAACAGAGATTATTGTTTATTCAGTAACCCTTCATTTACT
CACCAACAATCACCTTTACGTGCTCGAATACAACAGAAAAAGTTATCAGA
GAACTTCCCATTCAaaccaaaacatgaaaaagctCCAGTAAAAAAACCTA
ACAATGAACTTCACATCAATAAACCTAGTGCACTTTGTGCAACAAAATCC
CCAGTCAAAGTAATAAGGGGGAAGTCTCCACAAGCTAAAGAGAAgcatga
aaataataaaacttaTCAATTTACAGACAACCATCCAATAGAACAAGCAG
AAGATATAACTTTTAATAGAACAGAAAAAGTTTCTTTCGACTTAGCTGAA
GAAATGAAAGTTCCAAATGTCAACAAAGGAAAATCCCAACAACATACAGG
AGGATCTTATAGTGAAGATTGCGTCATTCCACCAACCCCTCCagttaaaa
aatccaaaaatttcaaatcaaaagacTCAATAATAAAACATAACGATACT
ACGCTTTCAACAAATCATACGAAAGTTACCAAACTTCCAGAAGAGATTAA
TTTGGAAGACTTTGATGATGAACCTATGGAAGTATTCACAAACGAGAAAA
ATCTTGACAATGAACGTGATCATGAAAAGGCTAAGTTAAACACTCGAGTA
GGAAATACTAAAAAACTTAAAGAACTTTCACAAGAAATTAAAGGAACTAT
TGACTCTGCTGACGTTGTCTTTGATATTGAAGCTTGCCCTGCAAAACCAT
TTAGAGATACAGAGAGGGATGTAATCGACATTGGATCAAGCATAGGGGAG
ACTGACCTACCAACACCAGCCAACAAAGATATCAGCAGAAAATCAAACAT
ATTAGAAGAACCAATTATTGATCAAATTGATATCGAGCGGCCATGTGAAA
ATGACACGAATGTAACGGCTAACAAAAAGACAGTTTATGATAAAACTAAA
AGCTCAGATAAAGACATTTACATTGGCTCGAGCATTGatgtaaattttga
tcaaaGCCAACCAGAAAGCTTGCATGAAGAGGAAAACGAACTTTTTGGAG
AAGCTCATCCATCCCCTTTTAAAAATGCACCTAATCAAAAGATGAATAAA
CAAGCAGATATGTTTATTGGGTCGAGTATTGGCGCGGATTTCGATCAAAG
CGGAGaagaaaaaaccaaaaatttgttTGATCAATATCAGAATGATGATG
AGAGATTTCCAGAGCCATCTCCGCCGCCCTCCCCGCCCCAACCGCCACAC
ATGCATGTTGATGGAATCCCTGACGAGACACTCTTAAATCAGTCACCACC
TTTGAGTCAACCGCAGAGTTCGTTATTAAAAAACAAGCCTGACAGCCCTT
TTAAAAAACAATCATCTCCTGCGAAACATCCATCCAGTCCAGAAGATAAT
TTCCCAACATCGAGAAAATCATCTCCTCTCAAACGTCACACCACACCGAG
CACGGACTCATCAATTTCCAAGAATCATGTCAAAGCATTATTAAACTCAA
GTAAACGAAAACGAGCCAAGAGAATATCTTCATCAAGTGACAGCGATGGA
GAGCCAGACAATCCTCCTTCTCGGggagaaaagaagaaaagtacTCTCAT
TTCATACACACCGCCGCAGTTCCCAAACGAATCAGAATCGAGTGACGATG
AAGATGATACCTTACCTCAGGTTCCTTTCAAGAAGAAGAAACTCAATACA
GCAACAGTGGAATCAGTGAGAAGCTCTTACATTACACCAGGTCAACGCTT
TCGAGAGGACACAACACAAAACACTTCTACCAATAAAAGCATTCTCCATG
TGTCACATGAGGAGATTGAAGACTGGAAAACCAAGCTACGATCACCAATT
CATGCTCCAGatgatgatgacgtcacaaaacgcCCCTCCTCTCCTCCCTT
CGCCCCTCCAATCCCCGTCTCACAATCAACAGCCATTCGAAAGGAGAAAG
TTACCACTAAAGCAGGTCTACCTAACGTCTCTCGACTTTCCAGCCCTTTG
ACCACCTATAAGAAACTTCCTACGCCAAGAAAACAAAACGTCTCAATGGA
AAGAAGCTTAGAGGAGACTTCACCAAAAGTTGAATCTACGACTAAACCTT
TAAAACCAGTTATAATGACCACGCGGATATCGAGAAAGTTATTGTCTCAA
TGTCGCCTCATTTCTCAGAAGTTTGATATTGTTTACAAGAATGAATTCGA
TCACGAAGTCACTCACCTCGTCGTCAATACAGacGAGAATAACTCACTTT
CAAAGAGTGGTTACACATTCAAATATCTAATGGCGCTCGTATCCGGTCTG
TGGATTGTGAATTACAAGTGACCCTTACGAAGTAAAAGGTGATCCAGAGT
TCCTTCATCAATTAATTCCTAACCTCTGGCGAGCAAGATTCCACAGACGA
AACgcTAAACCATTGTTTCACGGCTTTCGATTCGCATTACTTGGAAGATT
TGAAAACTCACCGATAACTAAAGctCAACTGATCGCACTTTTACGGCAGT
CCAAGTCGGATGTTATTTACTCACCAAGCGAAATGGACTGCTCTTCAAGT
CAAATTGATACTGTGGTGATAACAGATGATGTGAAAGCCTTGACAAAGGA
AGAAAGAGTTGCAATGTATAACAACAAACCGAACATCTTCCATCCTGATT
GGATTGTTGAAAGCATTATCAATTGCAAAGTTCAAGATAGATCGGGCC
Run BLAST on NCBI

transcript from alignment at scaffold_58:1178606..1192042+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070872 ID=TCONS_00070872|Name=TCONS_00070872|organism=Clytia hemisphaerica|type=transcript|length=13437bp|location=Sequence derived from alignment at scaffold_58:1178606..1192042+ (Clytia hemisphaerica)
CTTGGGTTTCAAAATGGCGGGAAATGTTGTGGAGTCACAAAATTTGATGG
CTGATCAAAATTTTTAGCTTCAAGTTTAGATAATTCACAATCACAAGCTT
TATTTTGATCATGGAATCAGAATTCAGAGTCAAGGAAACAAGAAAGCTTT
TggaagatttgaagaaaaattttcaatgtacAATTTGGTGAGTTTAACTT
AGCTAAGAAAGAAcaacttattttgaaaattaagtgaaaataattttaat
caCTTTTTTTCTCATAACATATAAAGCCAAATTTCAACATCAGATTAATT
GTTCATTTTCACATATTTACCTTTAAACCTCCAGCAGGAGACACAATATC
TAACtctataaaatataaaacagtcaggcacatcctggcaaatgaacagg
gtgagcatttgcatggggtattcgtcacccagtgtaaatgagataggacg
tctcaggctaaaagcgtgaaaatgaacaaaaatgaacttcaaactgaaaa
aggggaaaaaggaacaaaactgggaactttattttttcattaaaagtttc
ttcaatcttcgaagacaaaattgacccatggaaaaaaaatttcatctaca
gtatgcagttctttgaaatgaagcaaaatatttccaacccggttcaatta
aactgggtattcggcgctattacgtcactttcgttttcaaccccgtccat
ttgccaatggtcgcaagtgaaaaataccccgttcatttgccaggatgtgc
ctgactgtaaaACAAAACATCATAAgataaggttttgaaaaaaataaaaa
taacttttttattaGTTAGttctaccgtgagattgggtaacttgcatcag
tggaggctaacatgcatagatcacaaatgaaagacctggctggtcattaa
aatacaactacgcagctccgctcgcagctcttcctaccatttttgttttg
atttaacttcgTATGAATTTTAATGACCgccagctttaaactcaaatttg
tcagattggtattggtactaaattagggggtgggtcccatgatattttgt
caaattcaaaaagtcatgttggtatcaataccaaattaagggggtgggtc
ccccttttttctgaaaattatgattttcaagttggtatcgatactaAAAT
AAGgaggtgggtcccccctttttctgaaaattatgattttcaagttggta
tcgataccaattttggggtggtggtgttaacttagctcaaaagNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCCAAATAGTAGAGAATTTAT
CAGAGATGagaattaaaaagaaatcactTTGGTATCTTTTTTCTATCGAA
AGTTACATTCATTTCCCCCATCACGCGTCGCCATCTtgagaaagaaaatg
tcacggcactaaaaactaaaaattttttttgttgagaTGCAAACAAACAG
CCATCGCTATTGAAGCGATGGTCCGTTCGTTCCCATTTCTTTTTTACTGA
ACGCAGTAAAGTTTCAAGCTTTTTTTTGAAGTCTGCTGATGCAGGGTTTT
GTTCGGAAGGTGACGGAGAAAAATCcaagtaaaaagatttttaagatttt
ttatacttttctttaacttttcacATTATCAGCAGGCATCAAAAGAATCC
TTAAAGCCTGGGCTTTTTGGTGGTaacatttgtttttctttaaatgaaTT
GCTTCAATAGCGATTGCTATTTTAAAACATGATGGTTGAGAAGTTTTTAA
CCTCGCCCCAGCAGACTGCGTGTGTGTGGCGTCATCTTTGTAGTCTGCTT
CCACGCcccatttttgaatattttggtgCGCGCAGCACTTTTGGCTTGGA
AGAGGTTGAACGCATTTTGACCAAAACAGTGAGCCCTTCACAATCCATTT
TGCTTATATCTTTTGAAGTACTTTATCATTTCTCAAAGGTAAcccctaat
tttttttctgatgcttaggcaaatacttttttatttattggtttacaGAT
CCGTCGACgctatttttgccaaaatttaaaaaaaataaaatagagatttc
aaaaacttttatttactttttctccactgaccttcaaaaaagaagaaaaa
aacataaaaaaacctttacttttaaacaggaaaacaaaagaaaagaagag
aagaGAGAGGGGTTAAATGATCTAACACAGCTGTGCCCTATTCTACTAAT
GTAAAGATACTTTGATCCTTCCCTTAATGTCAGGGAACTTCCCCATGGAA
TTTCCCTatccacaaaaaaaacaaactaaattatATAACTCTTTGTATAC
acaatggattttcttcatttttttctttattttgtagttgctttttattt
aaagtcctttATGTGATTGTTAAAATTCAAGAGTAGATATAAAAATAGGC
ATACCAGAAAATttgatgggggaacctaagtgggaaccctaATAAGGGTG
AaccctaagtgggaacctatgACAGTCTTACATAAACAAGTATCAGTCTT
TATGTGTACATTTTTAtctttaagtttatttttagtgttttttatccATA
GACTATCTATGACAACAAATTGCACTTTATTCTTTTGTCTTTAATCTGAA
AAATCGATACTTtaggaaatttcataaaattttattttattattttctcc
gatttcagatttttttaaagaaaataaaaaaaaatttaaacatcaatttc
atttttattttttttccatcttcctgtccaaaacttttcctcaAAATGTC
CATAAACCAGCCTCATCTGATAGCCTTAGGGCTATCAGACGAGTCTACTT
TTGTTTCTTCTgattaagtttgaaaatttggctGACTCCCCTATCTAAAC
TTGGATGTGacacgattggtcaaaacatgggacttgatatctggcctgta
ttttcacttactattGAAtatctttgacaacaaatttgttttaataactc
caccaagtttatcaattatACTTTCTGTCATGAAATGTcgcacaataact
ttcactgatagcgcaccctttttaacttttttgttttcattcaaaatgac
cagacGCTGATTAGAGAATTAGAGAATGCCTGCCGCCTCCgcgggattaa
caaataacaagtaTCAAAATTTTTCCATGAGCTTTTGAATGGTATAAGTG
GCTAATGGCTACAAAACTTTCAGATTTTATTGCCACAATTTCAGTGTTTT
CAGTTCatccttgaaaataaaaaaatcgttGGAAAGATCATTGGAAACAG
TTTTTAACAAAGatcattaaaaaaataaccCTGTTGGATTTTAGTATGCT
GATACATTTATAGTATGCACTGTATCTGTAAAGCACACTTTATATATATT
TAGAATATGTGAAATATGAAAGTATATAATCGGGTTGAACCTAATGCCTG
GGGTACACAGAAAGTGTACAGAAAAATTCCACTTAACCAATATGTCctgt
tttatttctttttagccTTGAATTGTTTTCGCAACCTGTATCAACAAAAT
GCAACCACATCTTCTGTCAGTACGTTTTTTCTCCACacattttatgattt
caatcTGTTGAAACGACTAACATTACTTCAGCGCTTAAGTTTCACcagtt
tctttttgttttgttctacACATACAAAATTTCTATCTTCAAACAACAGT
TTTAAGaaaaatgtaatgtaatgtatgatttataaatatttAGGTATTGT
CTAACGGAAATGATAGGCTCAAAGAAAAAGGCAAAGACAGCAAGATGTCC
TCTTTGCAACACCAATGTAAACAAAAggtaaaatgtaaattttattaaaa
taggAAATGTATTATTGAAATAATTATTCTGATCTGATCAAAGTCTAGCA
GGAAAATGCTTTAATGTTTTCTTATATTGAACTGTTATATTACAGACTTT
TCACAGCTCCTTGTTTTGATTTCAGAGGCACACATAAGAATGAAGTGATG
GGAAGCCTTGTGTCGTCAGTTCGTGAATTATGCAATGCTTTTGAGGATGA
CTGTCAATCAGCAGGTCTGTACCAATAAAATATCTTTTAGCAATGTTaga
acttttaaaagattttttatttgtgttaagttaaaaatattataggaaag
gcaaaaataaaaaatgtagtgtttccggaaaccggccaggtgaaaaagaa
attttttatgacccggccgcagactatgggttcatctatatggttcatca
taaagaaaatcaagttgaccgttcaagctatcaaacgtcatttggttaga
tattctcgcttgtaaatcaagttttgttcgttagtagttgatacattagt
attgagtttggaaactattctagtcgcgagttagggagttgctagttttt
agttggggagttaaaaaattaccagctaccgaaaaagaataacatacatc
aaaagtacgattttgTAAGTAAATGTAATACgagagtaatatataacaca
tataatacgtataatacataTACCACCTATAATATGCTTATATTTGCctt
aaacacgtgcgctgagagcatggaaagctattttctactgtaAACTTATa
tctttttatataataaagcatcacttgcagtatgatcaatattttttggg
gaatttgtttgacaatcattgtatttaaagattttgtcaatatttttaca
agagcgtgtcatgttgtcagcatattatgacaatgacataacagtactaa
gtattttggctttgctagccagcaccttaccattttaatgatcttaaagt
caataatTTGGTACTGGCTTgtttgaaatttgtacttttgggctacatta
gtttaaattagaaaattttcggtcgccgtaaagttttacgaactCCCCAT
TCGAActcattagtattcagggcttacttcatactgttcgtacataaagt
tatctttaaagttctatttaaatgatcttaagttatcaaaaatagcaaaa
aaatttattttcagccgaccgcatgagagcttttttccccgcattccgga
aacactacattttttcattttcgccaaagctcaagaaaaattatcaggta
ttttcatttttaaatgttCTGACATAATATATAGCTTCATTAgactaaag
gcttggggacacgagaagttttttttcgcgttggtgcaatgcaacatgct
ccatcccacaaacctgaaaaaataatttgaatcaattttgctccattgtc
ccagggacaaaatcagcgtgtcttttgggtattttcctcactttttgtcc
catgaaataaaaaaaaagaaaccatgagacacgcactttttttcttgtgt
tggtgggatggagcattgCACCAACAggaaaaaaacttcttgtgtcccca
agccttaaattggaaaatatattgGCAAAACTATGGGAAACTAACCAAAT
AGAATACTTAAACTCTTTGAAAATCATATTAGATTAATAAAAAAACcttg
ctttttattttttaggggTAGATGTTATGCCTTTATTATCACAGAGAGAT
CCAGCTTCACAAAGGGTAAGAGAATACAAGATCTTTTAGTCGTTCTCAGA
TAAGAAAGTGTAGTTTCTCAGGctatatttctttgaaaaatgatgaTATC
GAAAATACAtaatgattcaaaataacatgCATGTtaataaatatttattt
ttaattaaaaattaatgaaaactTCTCTTTCTCTctacttttagaaattt
gaactACAAAGAAAAAGGTAACAAAGTCGTTAGTGGTTCTTTAAACATGA
TATTTTTTCGATAGATTCAGGACTTCTTTTTCAGTCACCAGGCTTTACAG
CACTGTGACCTTATACTTTCTCTTTCTTCACTTTGTAGTAGTTTGGAAAA
AGTCAAGATGGACACACAGAAAAAGATTTCCctgtttgattttgatttag
aCCAATCCCAAGGTAAGCTTTGTCTGTGTTCTTCTTTAAATTAGGGGATA
ATGGTTTCATCCTACATTCAACTTAgcatgaaaattttttatcagtATTG
ATGAAGGATATTGTCACAATATATAtgaagaaaattcataaaatttctgt
ccaactatcttctttcaggaggtGGGTGTCAGAGCAACATATGTATTTTG
TCCTTATTGGGACTCATGAGCACTGCGTACTGCGTGATAGGTTTAGAGAT
CTCTTTTTGTTGCTCACCTTGAACTATGTAATTTATTCTAGGCACAAGCT
CCAACACAAGACCATCTCTTGGTCAACCAGGGAAAAAATAGTAAGGAATT
TCGCAGCAGGCTCAGTTATTTGTTTTTTACTATTACTTAATTTAGATATG
TACTTTGTTGCTCAAAGTAAACCTTTAACAATCAAATCTAACGGCCTTAT
AAAGTTCAAACATAGAGCTTTACAATATAACTTACAGGTTTGATGATATC
ATGAACATTTGAATGTAACCTTctctttatcattttttataacGCAATGG
AACATTTCTCTCTTTCAGTTCTACCTGTACCGCTCACAATAGTTCTTCGG
TCAAAAACTCTAAACAAGAAGAACAACAAAAAGAAGATAGGCGatcaaaa
atcaacaacaacaaaaagaagCCATCAAAATCTACGAAACAGAAATCTCC
AACCAAGATGCGTAAACTCCAATCAGACAAAACTCCTATCAAAGACTTTG
AATTTGAGAAACCTTCTTCAACTACTAAAAAATTCTCCGACATTCAAGCA
TCAACATCAACTGATGACTCAAATGAATATATCGCTTTACCAAATGTCAA
CAAAATCTTCATTGACGATGATGTGCCTCCCATTCCTCAAGATCTTGGTG
AAAATACTTTGATTGATGAATCAATAAATCAAGAAGCTTGTGTTTCACCA
GATAAGCATTCTTCTAAATCCATCGATAAAATAGATTCAGTTATACCTGA
TGCTACTAATACTGTGAATATGGAAGAGCTACCTGTAATAGAACAATTTG
AGTCTGAACCTGATAGAGTTGATGAACGACTATCTAAAgtcaataaaaat
gaaagtgataaGAATGTCAAAACTGGGACTTTAAAACCTGAAACCTCAga
agaaaaactttcagaagaaaaactttcagagGTTGAACTATTTAGAACAA
AATCTGAAGATATACTTCAAATACAACCTGAAAATATAGATCCTGAACAT
ATGGACCCTGAACATATTGGACCTAAAATTCCTCAAAAACAATCACCTGA
GCCTGAGCTTGTGAAACAGAGAGTCAAAACTCCCTTCACAATACTGACAA
AACGAAATATTGgcaataaaagtgaaaaccaACCAGCACCACCAGCTGTA
AAAACTGATATCCTCCATTCAGATGATAAACATGAACTCAATAATGATGT
AGAAAAGAACcagaaaaataatattatagAAATGCCAGACAGAAAGGAGA
TGGAATCAATTAATATGGTTAGTCCTTTCAAACATTCAAAATCTGAGATT
GAAAATAACGAGGCTGTAACAGCAAGGACTGATATTAAGTCAAATGAGAT
TTCTTCGCCATTGAAAGTTAACAAATCAAGCCCCTCTCGGCATTTAGAAA
CTTCTCCCTTCAAAAGCGATACAGAATGCTCTTTATCGGAGGGAAGTACT
CCAACAACGCCCTCATCCGCAGATTATGCTGAAAAAGTGACTTCAATGTG
GACAAAATATGAAAGCCCGAACAGAGATTATTGTTTATTCAGTAACCCTT
CATTTACTCACCAACAATCACCTTTACGTGCTCGAATACAACAGAAAAAG
TTATCAGAGAACTTCCCATTCAaaccaaaacatgaaaaagctCCAGTAAA
AAAACCTAACAATGAACTTCACATCAATAAACCTAGTGCACTTTGTGCAA
CAAAATCCCCAGTCAAAGTAATAAGGGGGAAGTCTCCACAAGCTAAAGAG
AAgcatgaaaataataaaacttaTCAATTTACAGACAACCATCCAATAGA
ACAAGCAGAAGATATAACTTTTAATAGAACAGAAAAAGTTTCTTTCGACT
TAGCTGAAGAAATGAAAGTTCCAAATGTCAACAAAGGAAAATCCCAACAA
CATACAGGAGGATCTTATAGTGAAGATTGCGTCATTCCACCAACCCCTCC
agttaaaaaatccaaaaatttcaaatcaaaagacTCAATAATAAAACATA
ACGATACTACGCTTTCAACAAATCATACGAAAGTTACCAAACTTCCAGAA
GAGATTAATTTGGAAGACTTTGATGATGAACCTATGGAAGTATTCACAAA
CGAGAAAAATCTTGACAATGAACGTGATCATGAAAAGGCTAAGTTAAACA
CTCGAGTAGGAAATACTAAAAAACTTAAAGAACTTTCACAAGAAATTAAA
GGAACTATTGACTCTGCTGACGTTGTCTTTGATATTGAAGCTTGCCCTGC
AAAACCATTTAGAGATACAGAGAGGGATGTAATCGACATTGGATCAAGCA
TAGGGGAGACTGACCTACCAACACCAGCCAACAAAGATATCAGCAGAAAA
TCAAACATATTAGAAGAACCAATTATTGATCAAATTGATATCGAGCGGCC
ATGTGAAAATGACACGAATGTAACGGCTAACAAAAAGACAGTTTATGATA
AAACTAAAAGCTCAGATAAAGACATTTACATTGGCTCGAGCATTGatgta
aattttgatcaaaGCCAACCAGAAAGCTTGCATGAAGAGGAAAACGAACT
TTTTGGAGAAGCTCATCCATCCCCTTTTAAAAATGCACCTAATCAAAAGA
TGAATAAACAAGCAGATATGTTTATTGGGTCGAGTATTGGCGCGGATTTC
GATCAAAGCGGAGaagaaaaaaccaaaaatttgttTGATCAATATCAGAA
TGATGATGAGAGATTTCCAGAGCCATCTCCGCCGCCCTCCCCGCCCCAAC
CGCCACACATGCATGTTGATGGAATCCCTGACGAGACACTCTTAAATCAG
TCACCACCTTTGAGTCAACCGCAGAGTTCGTTATTAAAAAACAAGCCTGA
CAGCCCTTTTAAAAAACAATCATCTCCTGCGAAACATCCATCCAGTCCAG
AAGATAATTTCCCAACATCGAGAAAATCATCTCCTCTCAAACGTCACACC
ACACCGAGCACGGACTCATCAATTTCCAAGAATCATGTCAAAGCATTATT
AAACTCAAGTAAACGAAAACGAGCCAAGAGAATATCTTCATCAAGTGACA
GCGATGGAGAGCCAGACAATCCTCCTTCTCGGggagaaaagaagaaaagt
acTCTCATTTCATACACACCGCCGCAGTTCCCAAACGAATCAGAATCGAG
TGACGATGAAGATGATACCTTACCTCAGGTTCCTTTCAAGAAGAAGAAAC
TCAATACAGGTGAGTGCGGTATTCCTTTCATTTAACTATATCGTTCTTTA
GCTCCATCCACGGATGCAGATAGTTCTGTTTTTGCGCTAAACTTACAGTT
CAACCAACTATTGGATACACTGTTCAATGGTGTTTCTCTGTTTTGAAAGC
AGCTTTATTTCTATAACTTTTCAGCAACAGTGGAATCAGTGAGAAGCTCT
TACATTACACCAGGTCAACGCTTTCGAGAGGACACAACACAAAACACTTC
TACCAATAAAAGCATTCTCCATGTGTCACATGAGGAGATTGAAGACTGGA
AAACCAAGCTACGATCACCAATTCATGCTCCAGatgatgatgacgtcaca
aaacgcCCCTCCTCTCCTCCCTTCGCCCCTCCAATCCCCGTCTCACAATC
AACAGCCATTCGAAAGGAGAAAGTTACCACTAAAGCAGGTCTACCTAACG
TCTCTCGACTTTCCAGCCCTTTGACCACCTATAAGAAACTTCCTACGCCA
AGAAAACAAAACGTCTCAATGGAAAGAAGCTTAGAGGAGACTTCACCAAA
AGTTGAATCTACGACTAAACCTTTAAAACCAGTTATAATGACCACGCGGA
TATCGAGAAAGTTATTGGTAAACACTATTTAAACTTATTTGGATGTGTTT
TCAAGTCTCTAGGGACGAGCTTACGATCACTCTCACCAACTTTCCTCGCC
CAACAAATATACTaatctttttttgtaaaaattcagatcattgatttttc
tctttctgCTTTTGACTTTGTTCGATAGTAACACGCCCTGAGGTTTTAGA
TTAAGACTTGGCTTGACAATAGAACCATAATATGAAATTTGCTATTACAT
GAATTTCCTATGAATACTTTAACATTCGTTTTTCTTTCAGTCTCAATGTC
GCCTCATTTCTCAGAAGTTTGATATTGTTTACAAGAATGAATTCGATCAC
GAAGTCACTCACCTCGTCGTCAATACAGGTTTCCTTATCattgtcacttt
taattgactCTTTTTTCAGCAATTGACTATCTAATAACTTCCATTGCTCT
AGTAAAGTGATGCCATCAAACNCTCAGCAATTGACTATCTAATAATTTCC
ATTGCTCTAGTAAAGTGATGCCATCAAACTCTTCTTGGACGCTTTTTATC
CAGtgacatatttttttgtatttttagacGAGAATAACTCACTTTCAAAG
AGTGGTTACACATTCAAATATCTAATGGCGCTCGTATCCGGTCTGTGGAT
TGTGAATTACAAGTGTAAGCTTCTTCAAagtatttttaagaaatattctc
cGTATAACTTTTCTTGTTTATTTATTTGCATTTTTGACTGCTCATTTAAA
ACGCGATTTCACTAATATTTTGGATTATTTTGTTAAATCTTTCAGGGCTC
TTTGCTTCATTCAAAGCGCAAAAATTAGTGAAGGAGGTTAGTATATGACG
TACCGTATTACTTCcaataaacacccccttcttttTAACGACCCCCTCTA
ATAAATACCCCCTTTAATAAAATGTCCCTcctaaaaggaagaaaaattta
ataagccacgccctcaaataaacgccttCTTCTAATAAACGCCTCCCTTT
TCGTAGGGGCGTTCATTTGAAATTAATAGCTGTAAGGAAAGGGTAGTAAA
CTGTAAGGAATACTATGCATTCAAAGAATAACGAATTTGCAAAACAAGGC
TTTGAATCAcctttaaaaataaagtttaatTTTCCAATTCCTTGGAATCT
TTCTTTCTCTATGTGGAAAcgtttgtttgttttctttcaGGACCCTTACG
AAGTAAAAGGTGATCCAGAGTTCCTTCATCAATTAATTCCTAACCTCTGG
CGAGCAAGATTCCACAGACGAAACGTAAGTGAACTTTATTCTAATGTTTT
GGCAATCTTTAAATTTGTTGATAGTGCTCAAATTTCTGGTTGAAAGATTT
CTTTTAAGCTCTTGACAATTCGACCTggatttgaagaagaaaaattcttc
GAAATCTGTTTGGACCAATAAAGAGGCCAAATTAACTACTTTAGATACTT
TAGTGGGGTCTTCCGAGGGCCCAAAATGAGATAGCGTTGTAtcatctttc
tttctttttttctcaggcTAAACCATTGTTTCACGGCTTTCGATTCGCAT
TACTTGGAAGATTTGAAAACTCACCGATAACTAAAGGTATAACATCTGAC
TGGTTGAATGTCATAAAGTCCAGTTTTGTTCTTGGTTTACGTGAAATTCC
ATTCTATTCCTTCGCATCTAGGACAGTTTTAAGTGCTAGATCTTCACATC
TTGGCCAGTTTGAAGTCCTAGATCTTCATATCTTCAATATGGTCATGAAG
GTtgatacttttctttttctagctCAACTGATCGCACTTTTACGGCAGTC
CAAGTCGGATGTTATTTACTCACCAAGCGAAATGGACTGCTCTTCAAGTC
AAATTGATGTAGGTGGCCTTTTTTCCAACAATTGCACTGTTTGAAATGGC
TACTTAATATCTTCTTTCGTTTCGATTGCAAAACTCTATTCTTCGAGCTA
TATGCACTGCTCTTGTCtatattgataatttttctaCAAGTTTCTTTTAA
GTTAAACACAATTGATAAGCGAATTCCCGGAGGGGCTCACTAGTGGTCGC
CTATAggagtgcctatagaccaaaaGTAAGGCTTGTAGCTGTCTACTGTG
TAGACTACATGAAACAAGAAAAGGGGTCGGAATTCTTCCCAGTTACTTCA
TTTGAGCTACAATATGAGACATTTATCTGTATCCGACCTTTGTGtccaac
attttttttaataggAGTGTCTGAATAGACAAATTGATCCTAGTAATGCT
CGCATTTCTGACTAagattaattttaaattttaattatttaacATTATTT
TATAGTGATAATAAAAACTAaatatctaaatctaaaatcaaTAATAAACA
TTAGAGAAGTTTGTGCGATAATATTCCGCGATAATTAACAATATCACTAG
CCTGTTCACATGACGACCATTTCTTCTTTTAGACTGTGGTGATAACAGAT
GATGTGAAAGCCTTGACAAAGGAAGAAAGAGGTGATACAAAAAACTTCAT
CAACTCCAACCCTCTTCACTCCTCCAAACATACTTCCTCGTTGTGGTGAC
ATTTAGTGGTTTATAAAAATCACCTTTTATTTTTGTCATCGTTACATTTN
GCTCATTGTGGTGACATTTAGTGGTTTATAAAAATCACCTTTTATTTTTG
TCATCATCACATTTCGAAATCTTGCAAGGAAGCTTTTCTCTCGTGAGGCT
TGAAACATGAGGGAGCTCTCCAAAATTGATCTCCTTTCCTTATAAACGAG
ATGTCCTAGAACCTTAAAATTGAAAGGATACAACCACCTGAACCCTCTAC
GACCTCTTAAAACCTTTGCTACTTATCTCATtgtgttcttttgttttggt
ttcaGTTGCAATGTATAACAACAAACCGAACATCTTCCATCCTGATTGGA
TTGTTGAAAGCATTATCAATTGCAAGTCAGTCATTTTTTACCTTACCAAG
TTACTTCTACTGTCTCTGTTGGATTTTCGTCTCAGTGAAATGTATAAAGA
GCTGTCTCAGAATTCTGCATAGTTCACCAACATTTTAAGAATgtttgctg
attttttctgtATAATCCATTTTCGTATCAGACTACAAACCTTGCTTTAA
CCACCTCTAAACGAAATCAGTCTTCTACGAGTCCTTGGAAATTATATTTC
CTCGAGTTTTAAAATCTGCCTTTTTCTAGCCGTTCTATCATCATTGAGTA
ATCTTAAGCTATGGCGCCCTAGCTGGAAGAttgaacttttaatttttttt
atttaagtattttggTCAAACGTATGCTAATATCTCAAAGTTTTCTTCCC
TTCTTATTTTATTGTAGAGTTCAAGATAGATCGGGCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_044077XLOC_044077Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070872-exon-scaffold_58-1491911889:1178606..1178792TCONS_00070872-exon-scaffold_58-1491911889:1178606..1178792Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1510915933:1178606..1178792TCONS_00070872-exon-scaffold_58-1510915933:1178606..1178792Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1575043694:1178606..1178792TCONS_00070872-exon-scaffold_58-1575043694:1178606..1178792Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1491911889:1182221..1182274TCONS_00070872-exon-scaffold_58-1491911889:1182221..1182274Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1510915933:1182221..1182274TCONS_00070872-exon-scaffold_58-1510915933:1182221..1182274Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1575043694:1182221..1182274TCONS_00070872-exon-scaffold_58-1575043694:1182221..1182274Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1491911889:1182449..1182532TCONS_00070872-exon-scaffold_58-1491911889:1182449..1182532Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1510915933:1182449..1182532TCONS_00070872-exon-scaffold_58-1510915933:1182449..1182532Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1575043694:1182449..1182532TCONS_00070872-exon-scaffold_58-1575043694:1182449..1182532Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1491911889:1182681..1182769TCONS_00070872-exon-scaffold_58-1491911889:1182681..1182769Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1510915933:1182681..1182769TCONS_00070872-exon-scaffold_58-1510915933:1182681..1182769Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1575043694:1182681..1182769TCONS_00070872-exon-scaffold_58-1575043694:1182681..1182769Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1491911889:1184221..1184270TCONS_00070872-exon-scaffold_58-1491911889:1184221..1184270Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1510915933:1184221..1184270TCONS_00070872-exon-scaffold_58-1510915933:1184221..1184270Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1575043694:1184221..1184270TCONS_00070872-exon-scaffold_58-1575043694:1184221..1184270Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1491911889:1184450..1184472TCONS_00070872-exon-scaffold_58-1491911889:1184450..1184472Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1510915933:1184450..1184472TCONS_00070872-exon-scaffold_58-1510915933:1184450..1184472Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1575043694:1184450..1184472TCONS_00070872-exon-scaffold_58-1575043694:1184450..1184472Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1491911889:1184594..1184667TCONS_00070872-exon-scaffold_58-1491911889:1184594..1184667Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1510915933:1184594..1184667TCONS_00070872-exon-scaffold_58-1510915933:1184594..1184667Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1575043694:1184594..1184667TCONS_00070872-exon-scaffold_58-1575043694:1184594..1184667Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1491911889:1184947..1184995TCONS_00070872-exon-scaffold_58-1491911889:1184947..1184995Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1510915933:1184947..1184995TCONS_00070872-exon-scaffold_58-1510915933:1184947..1184995Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1575043694:1184947..1184995TCONS_00070872-exon-scaffold_58-1575043694:1184947..1184995Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1491911889:1185224..1188114TCONS_00070872-exon-scaffold_58-1491911889:1185224..1188114Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1510915933:1185224..1188114TCONS_00070872-exon-scaffold_58-1510915933:1185224..1188114Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1575043694:1185224..1188114TCONS_00070872-exon-scaffold_58-1575043694:1185224..1188114Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1491911889:1188280..1188722TCONS_00070872-exon-scaffold_58-1491911889:1188280..1188722Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1510915933:1188280..1188722TCONS_00070872-exon-scaffold_58-1510915933:1188280..1188722Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1575043694:1188280..1188722TCONS_00070872-exon-scaffold_58-1575043694:1188280..1188722Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1491911889:1188996..1189083TCONS_00070872-exon-scaffold_58-1491911889:1188996..1189083Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1510915933:1188996..1189083TCONS_00070872-exon-scaffold_58-1510915933:1188996..1189083Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1575043694:1188996..1189083TCONS_00070872-exon-scaffold_58-1575043694:1188996..1189083Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1491911889:1189283..1189369TCONS_00070872-exon-scaffold_58-1491911889:1189283..1189369Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1510915933:1189283..1189369TCONS_00070872-exon-scaffold_58-1510915933:1189283..1189369Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1575043694:1189283..1189369TCONS_00070872-exon-scaffold_58-1575043694:1189283..1189369Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1491911889:1189896..1189979TCONS_00070872-exon-scaffold_58-1491911889:1189896..1189979Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1510915933:1189896..1189979TCONS_00070872-exon-scaffold_58-1510915933:1189896..1189979Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1575043694:1189896..1189979TCONS_00070872-exon-scaffold_58-1575043694:1189896..1189979Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1491911889:1190222..1190291TCONS_00070872-exon-scaffold_58-1491911889:1190222..1190291Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1510915933:1190222..1190291TCONS_00070872-exon-scaffold_58-1510915933:1190222..1190291Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1575043694:1190222..1190291TCONS_00070872-exon-scaffold_58-1575043694:1190222..1190291Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1491911889:1190478..1190563TCONS_00070872-exon-scaffold_58-1491911889:1190478..1190563Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1510915933:1190478..1190563TCONS_00070872-exon-scaffold_58-1510915933:1190478..1190563Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1575043694:1190478..1190563TCONS_00070872-exon-scaffold_58-1575043694:1190478..1190563Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1491911889:1191138..1191186TCONS_00070872-exon-scaffold_58-1491911889:1191138..1191186Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1510915933:1191138..1191186TCONS_00070872-exon-scaffold_58-1510915933:1191138..1191186Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1575043694:1191138..1191186TCONS_00070872-exon-scaffold_58-1575043694:1191138..1191186Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1491911889:1191561..1191630TCONS_00070872-exon-scaffold_58-1491911889:1191561..1191630Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1510915933:1191561..1191630TCONS_00070872-exon-scaffold_58-1510915933:1191561..1191630Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1575043694:1191561..1191630TCONS_00070872-exon-scaffold_58-1575043694:1191561..1191630Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1491911889:1192023..1192042TCONS_00070872-exon-scaffold_58-1491911889:1192023..1192042Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1510915933:1192023..1192042TCONS_00070872-exon-scaffold_58-1510915933:1192023..1192042Clytia hemisphaericaexon
TCONS_00070872-exon-scaffold_58-1575043694:1192023..1192042TCONS_00070872-exon-scaffold_58-1575043694:1192023..1192042Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_58supercontigscaffold_58:1178606..1192042 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.13559	3.5108	1.12233	1.07792	7.82121	5.91901	4.88471	5.58601	2.33416	3.97715	1.40998	1.23973	1.68321	1.82085	1.46318	2.71207	3.38778	3.35491	0.76708	0.955725	1.79789	2.00979	3.40431	3.53991	4.95355	5.89765	1.52107	1.28603	3.80612	4.34822
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070872 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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