TCONS_00070712 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070712
Unique NameTCONS_00070712
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length144

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070712 ID=TCONS_00070712|Name=TCONS_00070712|organism=Clytia hemisphaerica|type=transcript|length=144bp
AACGCACAAAAACCAAAACAATTGATGTAGTGTctaaatcatgaaaaaat
ctACGTAAATTATACAATCGAATATTATTTGCTATCAAAATaccatttac
aaaaattttgttattgaaTTTATAGAAACTAAAAATGCTATGNN
Run BLAST on NCBI

transcript from alignment at scaffold_57:2036..2179

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070712 ID=TCONS_00070712|Name=TCONS_00070712|organism=Clytia hemisphaerica|type=transcript|length=144bp|location=Sequence derived from alignment at scaffold_57:2036..2179 (Clytia hemisphaerica)
NNCATAGCATTTTTAGTTTCTATAAAttcaataacaaaatttttgtaaat
ggtATTTTGATAGCAAATAATATTCGATTGTATAATTTACGTagattttt
tcatgatttagACACTACATCAATTGTTTTGGTTTTTGTGCGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043988XLOC_043988Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070712-exon-scaffold_57-1491911889:2036..2179TCONS_00070712-exon-scaffold_57-1491911889:2036..2179Clytia hemisphaericaexon
TCONS_00070712-exon-scaffold_57-1510915933:2036..2179TCONS_00070712-exon-scaffold_57-1510915933:2036..2179Clytia hemisphaericaexon
TCONS_00070712-exon-scaffold_57-1575043694:2036..2179TCONS_00070712-exon-scaffold_57-1575043694:2036..2179Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_57supercontigscaffold_57:2036..2179 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070712 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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