TCONS_00070699 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070699
Unique NameTCONS_00070699
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2654

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070699 ID=TCONS_00070699|Name=TCONS_00070699|organism=Clytia hemisphaerica|type=transcript|length=2654bp
TTCTAGCAAAAACATAAAAGTGAAAATCAAAGCCCTGACTCATTTGGAAT
GAGTCGAATGATTCTCTGAAACGGCGTCTTATATTCCTACCCAGGATGAA
CTGAACGAAAgttgaattgaaaacaaagaagaagaaaCATACACAAAGTT
TAGCAAAATGAGTTACAAATACTCGACCATACCCCCGTCTGAAAAGAATG
GCGAAGAAAGAGCTGAAGAAGCGGATGAAGAAGGAAGAAATTTGTATGAA
ACCCTTGGTCTTGCTAAAGATGCTACCCCTGAAGAGATCAAAAAGGCTTA
TCGTAAGATGGCCCTAAAATATCATCCAGACAAAAATCCAAACAACCCTG
AAGCCACAGAAAAATTTAAACAAATCAACCATGCACATACTATTTTATCT
GACCcaagtaaaaaagaaatttatgatCGCTATGGATCTATGGGATTGTA
TATTGCAGAACAATTTGGCGAGGAGaacgTCAAGACATATTTCATGCTGA
GTAGCGGCTGGTGTAAAGGACTTATGATATTCTGCGGAATAATAACCGGT
TGTTatttctgttgttgttgtttttgcttttgttgTAACTTTTGTTGCGG
GAAGTACAAACATGTTGTGGAAGAGGAAGATACCCCAGATTATAATGATA
TTACAAAATCGTCAGAGGATGTAACCTCTACAACGAACGGTGATGGAGTT
ATAGTAGGGGAGCCTGTAGCAGCATCCCCTACTAAGAACCCTATTGTTTT
GGGTGATGAGAGTACAGTTATAACAGAACAACCACCCTCTTATGCTAGTC
TCGGAACCACTGACCAAACTAAGCCCAATGATACGGCAGCCGAAGGGGAG
AAATAGTGAATATgctatgttttgtttttatatggAATTTAATGGAAAAT
GTATGGAATATGAGAGATTCTATTCAGGTCTCTATGTCGTGAACAGAACT
AGATAGATGACCTGAGACAGGCAGCAGTTCGATATGCTGCAATTACCGTA
TATTGCTGGACATATTATCGTAACTGGAATTATATTCTCATAGAAAAGCT
ACACAGATACCAGTTGAAATACGCATAGGACCTGAAATATAACCTTGCAC
AAAATGTGTAATGACCGTCTTCATATTTTCTAAACTGGAATGTAAGAAGC
TCGTGCAGATTAGAGTAAATTAATGATCTTCAAATGCTGTGTATTGACCT
AAGTACCTAAAGGGCCAAAATTAAGTCCCTTAAGGTAATAGTACTAAAta
tctttctaattttttttctgaatttctaTAGGCAGGAAATCATTGAATAT
GCCAGCCAAACCTTTTCAATTACAATCTTGTCCAGTATTTTAGGTATTTT
TGCATTTAATTTAAAGGGGACTTTCCTTTTTATGACTGACGCCTTTGTCG
AGAAAAAAGTATGAATTTTCAACTAATTCTTCCTTTGGTATCCTTTGAAA
GATCAGACACAGTATCGAATTTTCAAAGAGGGTATTGTGTAATGAGTTTA
TATAGGTTGAACATATTTACACTTTTAATGTGGTGCCATACCAGTTAACA
AAGTTAAATCTAAAACAAAACTATCATGGTATTacaaaagttttgttttg
aatttaacTTTCAACAGACGTAATGCCATATTTAAATGATGGTAAATATG
CGCATCATTATTGTacttttaaacttaaaaatccTGTTATTTTGTTCATA
TCTtacaaaatgttattttctagCCATCCATAAATATTTGTATCTAaaat
tattactattattttgTTACTAGGAAAAAAGAGTATTATCAAAGCCTTTG
ATCAAGACAAATCGCGTTTTCTCCTTGTTTTTGTACCAAGCCGTATGAAG
GTATCTTTAGTTCCATTTAGCTAATTAATATACTTAAACGCTAGTTGCAT
TTGTAATAACCAAGTAAATATTTTAGTGTACAGTATCACAAAAAagcaga
gaaatttttatataaagtaaaattctcaaaacttttcATGTAAACATAGC
GTCAATCTCCCTTGCTagttggggggggggttacaaCCTCCAAAAAGCCC
AAAAAAGGTGGGGGCTAaagatgtttcaaatatttgggTTGACCTAAAGT
ACTTGGGGAGATGAAATCTCATCATTTAAACTGGAGGCTGAATACTTCAT
CTTGATGGTTGGGTTCAATTACAGTACTCAAATTAAAGCTCGTGaagctg
aaaaattatatttttatataaaatgagcaaaatatttcatcttaaTCTTC
CAACATTGAATACCTTGTAGTACAAACTTTTAAACTGTACACTAAAATGT
TAACCTTTTTATTAAAATGATTAACTAGCCAATCAATGTAATATAAACCC
TTTTTATTCACATGATTATCTTAAAATCTGACGTGTTCTTAACAGGCACA
CTGTAGAGAAGGTCGAGCCCTTATTGTCAACCCCGTAAATTACTCGCCTT
ATAAAACTACAACATCTATGGCCCGATTTATGAACGctcaaaagacaaaa
aatatgCTGAGAATGATGTTGCTCTACCAGAATTACTGTTTTCGTTTGTT
TAGAAaagtgaatttattttttgatgtagttattatttttattacttctt
taaaattattgaaataattaaataaagaatGGAATACAAACTGTCTAACA
TTCA
Run BLAST on NCBI

protein sequence of TCONS_00070699-protein

>TCONS_00070699-protein ID=TCONS_00070699-protein|Name=TCONS_00070699-protein|organism=Clytia hemisphaerica|type=polypeptide|length=232bp
MSYKYSTIPPSEKNGEERAEEADEEGRNLYETLGLAKDATPEEIKKAYRK
MALKYHPDKNPNNPEATEKFKQINHAHTILSDPSKKEIYDRYGSMGLYIA
EQFGEENVKTYFMLSSGWCKGLMIFCGIITGCYFCCCCFCFCCNFCCGKY
KHVVEEEDTPDYNDITKSSEDVTSTTNGDGVIVGEPVAASPTKNPIVLGD
ESTVITEQPPSYASLGTTDQTKPNDTAAEGEK
Run BLAST on NCBI

transcript from alignment at scaffold_57:708705..720926-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070699 ID=TCONS_00070699|Name=TCONS_00070699|organism=Clytia hemisphaerica|type=transcript|length=12222bp|location=Sequence derived from alignment at scaffold_57:708705..720926- (Clytia hemisphaerica)
TTCTAGCAAAAACATAAAAGTGAAAATCAAAGCCCTGACTCATTTGGAAT
GAGTCGAATGATTCTCTGAAACGGCGTCTTATATTCCTACCCAGGATGAA
CTGAACGAAAGTTGAATTGAAAACAAAGAAGAAGAAACATACACAAAGTT
TAGCAAAATGAGTTACAAATACTCGACCATACCCCCGTCTGAAAAGAATG
GCGAAGAAAGAGCTGAAGAAGCGGATGAAGAAGGAAGGTAAATTAATTCT
CATTTATTTCTTTTCTAAGAAATTTTGTTACTTTTCACTCGTAAAATCAT
AAAAGCGCGTAAACTTCGGCACGCAAAACACATTTAATGTGGTTTGGTTG
TAGTGTTTACGATATCAGTTTATTGCGCGCGCGAGTTCAGCCTGTGATGA
ACCAATCTTCCCCAGTAGTGATTTGTAAGAAAATGTATAGAACAATTTGG
TACAGGTTAACTTCGCCTCGCTATCAAAACATTCGAAATAATAATCGAGA
CAAAAAAGAGAGGCCTGGTGAAAGTTATGATCTCATACTTTCGTCGTTGG
GAGAGGATAATTACAAGGTCTCAAAAGAAGGTTGTCAATTGCTCATTCCG
ACATCGACTTATAACCTGACTGAAATTCGAGCCTTTACTAGCAACCCTGC
GGGGCCCAAGGCGCCGAGTATGCACCCGGCACAGTGACAAGCCGTTACTA
GCAACCCTGCGGGGCCCAAGGCGCCGAGGATGCACCCGGCACAGTGACAA
GCCGTTACTAGCAACCCTGACCCTACCTAACTGTTAGTTAATCAATTCCT
AACAACAAAACCCCCGGAAAATTTAAAATGTCGGAATGAGCAATAGACAA
CCTTCTTTTGAGACCTTGTAATTATCCTTTTCCTACTTCGTTTTGCTCGC
ACGAAAATCAACGTCAAAGAAATTTTGCAATACTAACTTTCTGTTTTACA
ACCTCAAATTTGTTCTCACAAATTGAAATGAAACGTTTATGAATGGAAAG
ATGGTTAGGTGATCTAGTTGGAATTAAATTTTTGTGTGAATGAAAGTTTG
TGAAGTATGTCTTCAGGACAAAACCCTCCTCCTGAACATCCTGATGAGAA
AGAACAGTGAGTATATTTTTTTCCAGGCGGTGTCAACCGAACCCTATCGA
ACCGATTTTTGTTATCGAACCCCCAGGGGGTACTACCCTTGTCGACCAAC
GGGGGTGTTCCGCTGAGGTTCGAAAAATGGACCCTACGTGGGACCCGAAA
TTTGCGAAAAAAGTGACCCTGAATGGGACTGAAATTCCAAAATTTTCTCA
AATTTTCTACTTTTTCCCCAAATTTTCCAAAAATAGGCACCCTACNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNCCCCCCCCCCCCCCCGCCCCGGATCGAACCATCAAA
CTTTATCGAACAAAATCGAACGATAGCTGTCGATGTCGATTACCGAACCC
GATCGAACAGCTATCGAACTTTACGAAAGTTCGAGTGTTCTTTGTTCGAT
GAAGTTCGATTGATGTTCGATGAGTTTGATTTAAGTTTGACGTGGTTCGA
TGAAAGTTCGATGTGGTTCGATGATTAATTCTACTTTTCTTTACCTTTCA
AAAAATTTCGAGGTTGTTTAATCAAAACACAGGCACCGTATGCTCAGTCA
GGGCCTCATTGGTCTTTTATAATATTAGTTCGGACAGTTACATCAATATG
CCTTCTTACCTGTCTTTAAAAATATAAATAAAAGTAATCACGGAAAAGGA
CGCGAAAAAAAAAGACATAAGTGTGAGAACAGAGNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAAGTGTG
AGAACAGAGTAATCAAACTCGTTAGAAAAAGTACCATTAGAAGTCATAAA
AAATCAACCTGAATAAATGCAATCGGAATTCCAGAGAACTTCATAATTTC
TCAAACAACATTACATTACTATGTCAAACTCCCATCACATAAATTTTACA
ATTACGTCAGAGTAGACTACGCTCGCCACCGAAGAGGTTTATTTGGAAAG
GGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACTC
GATGTTACAATCCAATTATTGAAAGTTTGTCTCGGCCTTTTTATAATGAG
CGAGACATACGTTCTCTGATTACGCAATTTTCATATAGACATTTTCGAGG
CATTTTGATGTAACTGTCGGATAGAATAAAAACATACCTGATCAACACAA
CCAAACCTTCTGTCTTGCGTTTACTCTTTCCTTCCCAACAAATTTCGTAT
TTGCTTATGTAGGTTTTAAAATCCACAAGTAATGAACCTCTTATAGCTTT
ATCTGAATAAATCTGGTTGAAAACTTTCTGTCAGGTTTCATTCCGTACGT
TTTTTATCCACGTGGTGAACCGGTTTCCCTGATTTCCCGATAATTAAAAC
TTGGAACTTTCCTGTGGGCGCGATTGGGCGTACCGCCATCGCGAAATATT
TTTCGTGAAAATTTACCGTATTCTAACGCTAATATAATCTACTTTAGGCG
TTCAAACTTTCGCGAACACAAACTTTCGCGATTTTCGCGAATTTTGGCCC
TTTTCGCGAAAGTAAATGTCTTTAAAAATTCTAGGAAGAGCCATTCGCGA
AAGTTTATGCTCGCGAAAAATATTTTTCTGTTAAATTCGCGAAAGTAAAT
GTCTTTAAAAATTCTAGGAAGAGCCATTCGCGAAAGTTTATGCTCGCGAA
AAATTCTTGATAAAATAGAAAATCTGTAAAACTTCAAATTTTGAATAAAA
TGTAACTTTTTTGGCACTTTTTAGCCTGCTAAAAGACTAGTAAGTCAAAG
GGCAAATGTTTCAAGCCAATCTAAGAAGTATTTGCCCCTCTAAGCCTTTT
TTTTATGTGAAAATTCTCAATTTTACGTCTTGATTCGCGAAAGTTTATGC
TCGCGAAAAATATTTTTCTGTTAAATTCGCGAAAGTAAATGTCGTGAATT
TCGCGATTTTTTGTCCTCGCGAAAGTTTCTGCTCGCGAAAGTTTGTACGC
CTAGATAGGAAACAAATATTAAATTTTATTCTTTTTTTGTTCGTATTTCT
AAATTTCCCGATAAAAAGAACTATTTACAAATTATTTTCTTTAACGGGCA
TTGAATCAACATTTACATATTTAATGATGTCATAATCAATGCCGTGCATA
TTTTGTCAGCGCCGTGCATATTTTGTCAACATCTTCACAAGTGTTTCAAC
CGGTATTCCAACGAAGCCATATTTTGGTTTGTACAGAAATTTCGCCCGCT
CAAATCAAAACAACAAAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACGGCATTTCCCTGGATAAA
AATTCTGGTCACATGACCATCCGTGATTTTAGACCAATGAAAACGCTTCA
TTTCCCCGGATTAAAGTTGTATCTACACTAACACGCGGGAAGTAGCTAGA
AAAAGAGAGAAAAAACCGGGAGTCAAATTAAATTATTCTCCCTTCTTGCG
GCAAACATAAAAGACTTTAAGAGGCCATTTATTTCAGAAAGGGGTGTCAT
ATCATAAATAAATTATGTAAGTAAGTGATATTTTAAGTACTGTAACAAGT
TCATTAACAATTTTATTTTGAAGTTTGTTTTTAAAAACAAAACTCCCGTG
CTAGATGATAATTTCATTTTCTTAACTTATGGACCCATTTAGAAGTCTTT
GTAATTCAGATCATTTGGCAGTGTAGTTGCAGCCTATACAAGAATTGGAA
TCTAAAGTCTGAAGTCGTAACTCCTTGCCAGTGACCCCGCAGAGAAATTT
TTAGTTGGCAGACACTGACTTCAGGTTGGTTTGGAAATCGTTTTATTTTG
AAATGTAATCTTCACTTTAGATGAATACTTTTATTTATTTGGATTCATGA
AAGGTTCAAGGTTTGTTTACTTTTTATTTCAAATTATTTCATTGATTTAT
TAAGCTGCAATGGCTGATTGGAAAACGAAGATTTTTGATAGTTATCAGCG
TGGGCTTGGCCGCCATTTTGAATTTAGATTTTTTTCTCCTGTACTTGGCA
ATTTAGAGGTTGTTCGTAATACGCGATTTGGCTTACGCGTAACACTTGTG
CCTTTTCATTGGATAAATACCACTAAAATATACAAGATAAGTAAACATAA
ATTTATCGCCTGCGAGCACGGCTTAGCTAAGCGCACCTAGCTTATTCATT
ATCTAAGAATTGAAGCGGACAAAGATTATCGCACGGGCATGGCATGGACC
AGGGGTTTAGGTACCCCCTAAGAAAATAGGTACCCCCTGAATTTTAGGTA
CCCCCAAACAACAGACATTAGTAGGTACCCCCTGTGATTGGTACCCCCTG
TGACTTGAGTATATGTCAAGAAATGAAAAAAATTGTATATTTTTACAATT
AAAAAGAAGAATGATAGTTAGATAAAAGCAAGATAAAATATAGTTCCCAA
GCCCCCAGACCTTACTGCATAAAAGTTAGATACCCCCAGAGATCATAGGT
CCCCCCTGAAATTGAAAAAAAATCCAGCCCCCAGCCTTTTTCAGGAAGAT
TTTGGTTGTAGCCCCCCCCTGCGGGCTGGGGGGGGGGTTCATGCCATGGA
CAGGCTGATAGCAGAGAAAGGGTTTTTGAAGATATTTTCAGTTATAATCC
AAGGTAGAACAAACTAAACATAGAAAGGGGGTATTTTTAGTGCTCTATAC
GATGATCGGTATTTTTTTTTAATTCTATGTTTAGATTTTTCTACCCAGCC
CCTTTGCTATGTACGCGCGCCCTGTTGCTACAACGTTTGTTTGAAATCGA
AAGCGAAACCAAAATAATTTAGCACACACTGCCATTTGCGTAATATAAAA
TAAATGAAAGGAGGCCCTGACTGTGTAAAAGCTCCAGCTTGTCCCATCCG
ATGGGATAGATATAGGATGGCCTGCGAGAATGGCCTGTTGGCGGCAAGGT
ATAAATCGATTTAATCGAACCAATTGAACTTCATCGATCTTAATCGAACC
AATTGAACTTCATCGATCTTAATCGAACTGATCGAACTGCAATCGAACTA
TAATCATATAATCGAACAGTCATCAAACTTTACGAAAGTTTTCCCGGTTC
GATAGGTGTTCAATTGGGTTCGGTAATTGAACAGCTATCGTTCGATAGGG
TTCGATTAAGTTCGATTAGTTCGATAATCGAACAGTTCGATTGACACCGC
CTGGTTTTTTAAACACTTGTGTTGTTCTCTTGATTCAAGTATCATGACTT
CACTTTATTTTAAGCTTCAAAGGTTAATAATGCTATGAACTTTTTCTTTG
ACTCTTTCAGTCTTATGCTGGTGCTGTGGTATATAAAACAATTTGGGAAA
AACTGTGTTCTGTTTTCAAGGCTGGGATGATCACAACTTGTGTTTACGTT
GTTCAACTGATTTAATAATTTTCTTACATTTCCAAATCTTTTGAGATTTC
CAGAACTAACAAATTTTTTGAAATTCTTTAAAAAAGTCCAAGTTCCTAAT
TAGTTCTACTATCAGTGAAATACTCATTCATCTACCTAAGAGGAAATTCT
GGCAGGAAGAAATTTTGGCGATTTTATAATAAAATTTCTAAATTTGGTGA
GAATTAATTTTGGCTTGTTCCCATTTTTTGTTGAATATTTAAGCTTAAGG
TGGAGCCTTCCCAACTCAGACTTGCCAAGGAAAACGTCAATGAACGTTTT
CATTTTGAACCCCTATACACCCTTCAAATAATGATCTCAAAATATTCAAC
CCTTCTCAGGCACTTTTTTGGGTGATAATATTTGCTGTGATTTTACTTAG
AATTTTACTTTAACTCTGTTACCCCCGTCCCACGCCGCCTTGACATGAGC
AAGGGAATCATGTTGGCCTCTCCCTGCCTCTCCTGAAAATTTCAGATCAA
AACAAAGACTCCTGAAATTTTTGATTGTCAATATATTTCTTATTTGAAAG
AAAGTATTTGCTTCATGGAATAAAAAGATATACCTTATTGGAACAAACTG
GCAAAATTCTAGAATGAAAAAAACTGTGAAAACTAAAACTTGCAAAATGT
AATTTTTCGGATATTTTTTTCAACCGCAAAAATTAGTTCCCCCGAACATT
AGTTCCAATAAGGTAGTCAAATCTTGTAGGGTCATTTTTCCAAAAAATTT
GCCTAGATTGATTTCGCATTTTGCTATTTTACCCTACGCAAACGAACGTG
GGCATGGCCTGAACTTTCGCTGGTCAGGCGAAGATGACCCACACTGACCC
ACATTGACCCAAACAAGTTCNGAACTTTCGCTGGCCAGTCGAAAATGACC
CACATTGACCCACATTGACCCACACAAGTTAGAATCATGTTCTGGTAACT
TTTTTGTGACTGATCATCGAAGCTCTGTGTTAAGTACAGACCCATTTTAA
TGAATTTATTCTTAAAAAGTTTTTGAGTAAATTGAGGTCAAAAATAATTA
TTTTTCACAAAATAAAATTGAGAATTGACAATAATTGACAATATCTGTGT
TTCTTTTTAAATAAAATTTCTTTGATTTTTGCAACTTGTTGGTCCTGATT
TTATTTGTCTTCTGCAAGTTGTTCCCGTCAACACGCGTTAGAGCACGGAA
CTTCGACCCTCAGTTTAATTCTTCTAATTTCTTTTATTTTGTATTTGATT
TACACTTTTTAATGCTTTATACTGGAATTGAATCAGCCTTGGAATTGGAC
TACTTACTATTGGAATAATCTTAAATTGAACTACAACTGTACATTGAACA
TATTTGAACAACAAGAGAATATTGTTTTTGGGCTCAAACATGGCCCGAAC
ATGGCCCGAACATGGCCCAACAGTGTTCAGGCCTTGTTAGGGCAATGCTG
TTGGTCGTTGCCAATCTTTATTTCAATTAATTATTGATTGCACAAGAGTT
CTATTTCAAAATATAACAGAGATGATATCCAACGCTTATCCTATGAGCTT
ACAGTCAAATATGTCCTTCCCCCTTTATTATAAAGGGGATTATGATTTTG
CCCCTTTTTTTGAGGTATATATCAGGAAAATGAAATTTTGATTGGTAGGC
CACAATCACAAATAACTGTTCAAATCTGAAACTAGGAAATTTTTCTGAAA
ATCAGGAAAACTGTTTCCCAAAAATTGGAATATCAGGGAAATTTTTCTCA
AAACTCCAAAATTCTTGAGAAATCAAACTTTTCCAAAATTGCGTGAGACA
ATGTGGAAATGTGTAAGTCTCGTACCCAATGCATGAGAGTTGGCACTTCT
GTTTTTGGGAAGGGGACAGCAATTTCTCACTATTGCTAGAATTGTCAGAA
ATAACATAACAAAAACCATTAAATTATTCCAATTCTTTTTACAGAAATTT
GTATGAAACCCTTGGTCTTGCTAAAGATGCTACCCCTGAAGAGATCAAAA
AGGCTTATCGTAAGGTAAGTGCACGTTTTTTTTTAAGAAACACACTTTTA
AGAAACATGAGGCTCAGAATGCCTAAAAACTAAGAAACATCTAAGAAACA
TGCTTAGGCTGAGAATGAGAAAATAGCATTTTTTAATTCGTTTTTTTAAG
AACCTTCCAATCAAGGTTCCAGAAATATACATACATAACAGTTAGAAACA
CTTGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNCGTAGATTAGTCAATTAGACTATTG
TATTATCGACATGCGTCCTTTAAGCTTGACAAAGTTTAGAAACATGTAAG
AAACATTTAAGGCTCAAAAGGCCGATTTCATAAGAAACATTAAGCCAGCT
TGGTAAAACTAGTTTCTTAAAAAAAAACGTGTACTGCAGAAAGGAAAAAA
TATCTTTTCAATAGAATTCAGCATCTCATGTCAAAACCTGACATGAATTA
ATTTATTAAACCTACATTTCTACTATTTTCAGATGGCCCTAAAATATCAT
CCAGACAAAAATCCAAACAACCCTGAAGCCACAGAAAAAGTAAGTTCAAT
TTGTTGTTTCACCTTATTTTAGCAAAGCATAATGATCAATACCAAAGGAA
GGGTCTAAAATTCATGAAAGAAATCAGACGTGACAGAAGCGATTATATTT
GGTTACAAGAGGGAAAGATCTTCATTAAAGCCACTATTAGTAATATACCA
GTTTTTGTATTGGTCCTGATAGAAATCATGGATTTTATTCCTCTATGAGA
ATAAATTTTTGGACTTTTTTATCTAGCAGCATTTTCTATCTTTTTTTTAC
AGTTTAAACAAATCAACCATGCACATACTATTTTATCTGACCCAAGTAAA
AAAGAAATTTATGATCGCTATGGATCTATGGGATTGTATATTGCAGAACA
ATTTGGCGAGGAGGTAAGTTTTCCCATAAAAATTCATGGATTGAGCTAGT
CTCCTTGAAGTGATGGAAAGAACTCTGGCACTTTAGTGGGTCAAAGAATA
AAATGCTCACTGTTTTCTTCAGTTTTGGTCATTTTAGACGTATTTCTTAT
TATGAAATTTTTGGACTTTCACCTTTCTGTGGTTCAGCGAAAAACCTAGA
AAATTAAGCAATATTAATTTCTGCATTAGTTTATCCATACTAACTTTTCT
GCCAAACTTGTCTTGTAAAATTTTCCTCCATTTTTCTTTTCAGAACGTCA
AGACATATTTCATGCTGAGTAGCGGCTGGTGTAAAGGACTTATGATATTC
TGCGGAATAATAACCGGTTGTTATTTCTGTTGTTGTTGTTTTTGCTTTTG
TTGTAACTTTTGTTGCGGGAAGTACAAACATGTTGTGGAAGAGGAAGATA
CCCCAGATTATAATGATATTACAAAATCGTCAGAGGATGTAACCTCTACA
ACGAACGGTGATGGAGTTATAGTAGGGGAGCCTGTAGCAGCATCCCCTAC
TAAGAACCCTATTGTTTTGGGTGATGAGAGTACAGTTATAACAGAACAAC
CACCCTCTTATGCTAGTCTCGGAACCACTGACCAAACTAAGCCCAATGAT
ACGGCAGCCGAAGGGGAGAAATAGTGAATATGCTATGTTTTGTTTTTATA
TGGAATTTAATGGAAAATGTATGGAATATGAGAGATTCTATTCAGGTCTC
TATGTCGTGAACAGAACTAGATAGATGACCTGAGACAGGCAGCAGTTCGA
TATGCTGCAATTACCGTATATTGCTGGACATATTATCGTAACTGGAATTA
TATTCTCATAGAAAAGCTACACAGATACCAGTTGAAATACGCATAGGACC
TGAAATATAACCTTGCACAAAATGTGTAATGACCGTCTTCATATTTTCTA
AACTGGAATGTAAGAAGCTCGTGCAGATTAGAGTAAATTAATGATCTTCA
AATGCTGTGTATTGACCTAAGTACCTAAAGGGCCAAAATTAAGTCCCTTA
AGGTAATAGTACTAAATATCTTTCTAATTTTTTTTCTGAATTTCTATAGG
CAGGAAATCATTGAATATGCCAGCCAAACCTTTTCAATTACAATCTTGTC
CAGTATTTTAGGTATTTTTGCATTTAATTTAAAGGGGACTTTCCTTTTTA
TGACTGACGCCTTTGTCGAGAAAAAAGTATGAATTTTCAACTAATTCTTC
CTTTGGTATCCTTTGAAAGATCAGACACAGTATCGAATTTTCAAAGAGGG
TATTGTGTAATGAGTTTATATAGGTTGAACATATTTACACTTTTAATGTG
GTGCCATACCAGTTAACAAAGTTAAATCTAAAACAAAACTATCATGGTAT
TACAAAAGTTTTGTTTTGAATTTAACTTTCAACAGACGTAATGCCATATT
TAAATGATGGTAAATATGCGCATCATTATTGTACTTTTAAACTTAAAAAT
CCTGTTATTTTGTTCATATCTTACAAAATGTTATTTTCTAGCCATCCATA
AATATTTGTATCTAAAATTATTACTATTATTTTGTTACTAGGAAAAAAGA
GTATTATCAAAGCCTTTGATCAAGACAAATCGCGTTTTCTCCTTGTTTTT
GTACCAAGCCGTATGAAGGTATCTTTAGTTCCATTTAGCTAATTAATATA
CTTAAACGCTAGTTGCATTTGTAATAACCAAGTAAATATTTTAGTGTACA
GTATCACAAAAAAGCAGAGAAATTTTTATATAAAGTAAAATTCTCAAAAC
TTTTCATGTAAACATAGCGTCAATCTCCCTTGCTAGTTGGGGGGGGGGTT
ACAACCTCCAAAAAGCCCAAAAAAGGTGGGGGCTAAAGATGTTTCAAATA
TTTGGGTTGACCTAAAGTACTTGGGGAGATGAAATCTCATCATTTAAACT
GGAGGCTGAATACTTCATCTTGATGGTTGGGTTCAATTACAGTACTCAAA
TTAAAGCTCGTGAAGCTGAAAAATTATATTTTTATATAAAATGAGCAAAA
TATTTCATCTTAATCTTCCAACATTGAATACCTTGTAGTACAAACTTTTA
AACTGTACACTAAAATGTTAACCTTTTTATTAAAATGATTAACTAGCCAA
TCAATGTAATATAAACCCTTTTTATTCACATGATTATCTTAAAATCTGAC
GTGTTCTTAACAGGCACACTGTAGAGAAGGTCGAGCCCTTATTGTCAACC
CCGTAAATTACTCGCCTTATAAAACTACAACATCTATGGCCCGATTTATG
AACGCTCAAAAGACAAAAAATATGCTGAGAATGATGTTGCTCTACCAGAA
TTACTGTTTTCGTTTGTTTAGAAAAGTGAATTTATTTTTTGATGTAGTTA
TTATTTTTATTACTTCTTTAAAATTATTGAAATAATTAAATAAAGAATGG
AATACAAACTGTCTAACATTCA

Coding sequence (CDS) from alignment at scaffold_57:708705..720926-

>TCONS_00070699 ID=TCONS_00070699|Name=TCONS_00070699|organism=Clytia hemisphaerica|type=CDS|length=3495bp|location=Sequence derived from alignment at scaffold_57:708705..720926- (Clytia hemisphaerica)
AACGTCAAGACATATTTCATGCTGAGTAGCGGCTGGTGTAAAGGACTTAT
GATATTCTGCGGAATAATAACCGGTTGTTATTTCTGTTGTTGTTGTTTTT
GCTTTTGTTGTAACTTTTGTTGCGGGAAGTACAAACATGTTGTGGAAGAG
GAAGATACCCCAGATTATAATGATATTACAAAATCGTCAGAGGATGTAAC
CTCTACAACGAACGGTGATGGAGTTATAGTAGGGGAGCCTGTAGCAGCAT
CCCCTACTAAGAACCCTATTGTTTTGGGTGATGAGAGTACAGTTATAACA
GAACAACCACCCTCTTATGCTAGTCTCGGAACCACTGACCAAACTAAGCC
CAATGATACGGCAGCCGAAGGGGAGAAATAGTTTAAACAAATCAACCATG
CACATACTATTTTATCTGACCCAAGTAAAAAAGAAATTTATGATCGCTAT
GGATCTATGGGATTGTATATTGCAGAACAATTTGGCGAGGAGATGGCCCT
AAAATATCATCCAGACAAAAATCCAAACAACCCTGAAGCCACAGAAAAAA
AATTTGTATGAAACCCTTGGTCTTGCTAAAGATGCTACCCCTGAAGAGAT
CAAAAAGGCTTATCGTAAGATGAGTTACAAATACTCGACCATACCCCCGT
CTGAAAAGAATGGCGAAGAAAGAGCTGAAGAAGCGGATGAAGAAGGAAGA
ACGTCAAGACATATTTCATGCTGAGTAGCGGCTGGTGTAAAGGACTTATG
ATATTCTGCGGAATAATAACCGGTTGTTATTTCTGTTGTTGTTGTTTTTG
CTTTTGTTGTAACTTTTGTTGCGGGAAGTACAAACATGTTGTGGAAGAGG
AAGATACCCCAGATTATAATGATATTACAAAATCGTCAGAGGATGTAACC
TCTACAACGAACGGTGATGGAGTTATAGTAGGGGAGCCTGTAGCAGCATC
CCCTACTAAGAACCCTATTGTTTTGGGTGATGAGAGTACAGTTATAACAG
AACAACCACCCTCTTATGCTAGTCTCGGAACCACTGACCAAACTAAGCCC
AATGATACGGCAGCCGAAGGGGAGAAATAGTTTAAACAAATCAACCATGC
ACATACTATTTTATCTGACCCAAGTAAAAAAGAAATTTATGATCGCTATG
GATCTATGGGATTGTATATTGCAGAACAATTTGGCGAGGAGATGGCCCTA
AAATATCATCCAGACAAAAATCCAAACAACCCTGAAGCCACAGAAAAAAA
ATTTGTATGAAACCCTTGGTCTTGCTAAAGATGCTACCCCTGAAGAGATC
AAAAAGGCTTATCGTAAGATGAGTTACAAATACTCGACCATACCCCCGTC
TGAAAAGAATGGCGAAGAAAGAGCTGAAGAAGCGGATGAAGAAGGAAGAA
CGTCAAGACATATTTCATGCTGAGTAGCGGCTGGTGTAAAGGACTTATGA
TATTCTGCGGAATAATAACCGGTTGTTATTTCTGTTGTTGTTGTTTTTGC
TTTTGTTGTAACTTTTGTTGCGGGAAGTACAAACATGTTGTGGAAGAGGA
AGATACCCCAGATTATAATGATATTACAAAATCGTCAGAGGATGTAACCT
CTACAACGAACGGTGATGGAGTTATAGTAGGGGAGCCTGTAGCAGCATCC
CCTACTAAGAACCCTATTGTTTTGGGTGATGAGAGTACAGTTATAACAGA
ACAACCACCCTCTTATGCTAGTCTCGGAACCACTGACCAAACTAAGCCCA
ATGATACGGCAGCCGAAGGGGAGAAATAGTTTAAACAAATCAACCATGCA
CATACTATTTTATCTGACCCAAGTAAAAAAGAAATTTATGATCGCTATGG
ATCTATGGGATTGTATATTGCAGAACAATTTGGCGAGGAGATGGCCCTAA
AATATCATCCAGACAAAAATCCAAACAACCCTGAAGCCACAGAAAAAAAA
TTTGTATGAAACCCTTGGTCTTGCTAAAGATGCTACCCCTGAAGAGATCA
AAAAGGCTTATCGTAAGATGAGTTACAAATACTCGACCATACCCCCGTCT
GAAAAGAATGGCGAAGAAAGAGCTGAAGAAGCGGATGAAGAAGGAAGAAC
GTCAAGACATATTTCATGCTGAGTAGCGGCTGGTGTAAAGGACTTATGAT
ATTCTGCGGAATAATAACCGGTTGTTATTTCTGTTGTTGTTGTTTTTGCT
TTTGTTGTAACTTTTGTTGCGGGAAGTACAAACATGTTGTGGAAGAGGAA
GATACCCCAGATTATAATGATATTACAAAATCGTCAGAGGATGTAACCTC
TACAACGAACGGTGATGGAGTTATAGTAGGGGAGCCTGTAGCAGCATCCC
CTACTAAGAACCCTATTGTTTTGGGTGATGAGAGTACAGTTATAACAGAA
CAACCACCCTCTTATGCTAGTCTCGGAACCACTGACCAAACTAAGCCCAA
TGATACGGCAGCCGAAGGGGAGAAATAGTTTAAACAAATCAACCATGCAC
ATACTATTTTATCTGACCCAAGTAAAAAAGAAATTTATGATCGCTATGGA
TCTATGGGATTGTATATTGCAGAACAATTTGGCGAGGAGATGGCCCTAAA
ATATCATCCAGACAAAAATCCAAACAACCCTGAAGCCACAGAAAAAAAAT
TTGTATGAAACCCTTGGTCTTGCTAAAGATGCTACCCCTGAAGAGATCAA
AAAGGCTTATCGTAAGATGAGTTACAAATACTCGACCATACCCCCGTCTG
AAAAGAATGGCGAAGAAAGAGCTGAAGAAGCGGATGAAGAAGGAAGAACG
TCAAGACATATTTCATGCTGAGTAGCGGCTGGTGTAAAGGACTTATGATA
TTCTGCGGAATAATAACCGGTTGTTATTTCTGTTGTTGTTGTTTTTGCTT
TTGTTGTAACTTTTGTTGCGGGAAGTACAAACATGTTGTGGAAGAGGAAG
ATACCCCAGATTATAATGATATTACAAAATCGTCAGAGGATGTAACCTCT
ACAACGAACGGTGATGGAGTTATAGTAGGGGAGCCTGTAGCAGCATCCCC
TACTAAGAACCCTATTGTTTTGGGTGATGAGAGTACAGTTATAACAGAAC
AACCACCCTCTTATGCTAGTCTCGGAACCACTGACCAAACTAAGCCCAAT
GATACGGCAGCCGAAGGGGAGAAATAGTTTAAACAAATCAACCATGCACA
TACTATTTTATCTGACCCAAGTAAAAAAGAAATTTATGATCGCTATGGAT
CTATGGGATTGTATATTGCAGAACAATTTGGCGAGGAGATGGCCCTAAAA
TATCATCCAGACAAAAATCCAAACAACCCTGAAGCCACAGAAAAAAAATT
TGTATGAAACCCTTGGTCTTGCTAAAGATGCTACCCCTGAAGAGATCAAA
AAGGCTTATCGTAAGATGAGTTACAAATACTCGACCATACCCCCGTCTGA
AAAGAATGGCGAAGAAAGAGCTGAAGAAGCGGATGAAGAAGGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043982XLOC_043982Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070699-exon-scaffold_57-1575043694:720690..720926TCONS_00070699-exon-scaffold_57-1575043694:720690..720926Clytia hemisphaericaexon
TCONS_00070699-exon-scaffold_57-1575043694:712213..712282TCONS_00070699-exon-scaffold_57-1575043694:712213..712282Clytia hemisphaericaexon
TCONS_00070699-exon-scaffold_57-1575043694:711538..711594TCONS_00070699-exon-scaffold_57-1575043694:711538..711594Clytia hemisphaericaexon
TCONS_00070699-exon-scaffold_57-1575043694:711164..711274TCONS_00070699-exon-scaffold_57-1575043694:711164..711274Clytia hemisphaericaexon
TCONS_00070699-exon-scaffold_57-1575043694:708705..710883TCONS_00070699-exon-scaffold_57-1575043694:708705..710883Clytia hemisphaericaexon
TCONS_00070699-exon-scaffold_57-1510915933:720690..720926TCONS_00070699-exon-scaffold_57-1510915933:720690..720926Clytia hemisphaericaexon
TCONS_00070699-exon-scaffold_57-1510915933:712213..712282TCONS_00070699-exon-scaffold_57-1510915933:712213..712282Clytia hemisphaericaexon
TCONS_00070699-exon-scaffold_57-1510915933:711538..711594TCONS_00070699-exon-scaffold_57-1510915933:711538..711594Clytia hemisphaericaexon
TCONS_00070699-exon-scaffold_57-1510915933:711164..711274TCONS_00070699-exon-scaffold_57-1510915933:711164..711274Clytia hemisphaericaexon
TCONS_00070699-exon-scaffold_57-1510915933:708705..710883TCONS_00070699-exon-scaffold_57-1510915933:708705..710883Clytia hemisphaericaexon
TCONS_00070699-exon-scaffold_57-1491911889:720690..720926TCONS_00070699-exon-scaffold_57-1491911889:720690..720926Clytia hemisphaericaexon
TCONS_00070699-exon-scaffold_57-1491911889:712213..712282TCONS_00070699-exon-scaffold_57-1491911889:712213..712282Clytia hemisphaericaexon
TCONS_00070699-exon-scaffold_57-1491911889:711538..711594TCONS_00070699-exon-scaffold_57-1491911889:711538..711594Clytia hemisphaericaexon
TCONS_00070699-exon-scaffold_57-1491911889:711164..711274TCONS_00070699-exon-scaffold_57-1491911889:711164..711274Clytia hemisphaericaexon
TCONS_00070699-exon-scaffold_57-1491911889:708705..710883TCONS_00070699-exon-scaffold_57-1491911889:708705..710883Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070699-proteinTCONS_00070699-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_57supercontigscaffold_57:708705..720926 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.39853	10.0455	7.60197	5.4134	49.4219	30.6385	40.4701	36.1889	24.3013	33.5403	20.101	30.1855	18.3826	14.9256	7.78827	8.86537	17.4609	14.4101	17.3642	23.3206	21.1916	21.1801	10.8973	11.4332	10.9785	12.2724	5.50034	2.93498	3.51145	4.39415
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001623DnaJ_domain
Blast
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BLAST of TCONS_00070699 vs. Swiss-Prot (Human)
Match: DNJC5 (DnaJ homolog subfamily C member 5 OS=Homo sapiens GN=DNAJC5 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.788e-41
Identity = 66/95 (69.47%), Postives = 82/95 (86.32%), Query Frame = 2 
Query:  242 LYETLGLAKDATPEEIKKAYRKMALKYHPDKNPNNPEATEKFKQINHAHTILSDPSKKEIYDRYGSMGLYIAEQFGEENVKTYFMLSSGWCKGLM 526
            LY  LGL K+AT ++IKK+YRK+ALKYHPDKNP+NPEA +KFK+IN+AH IL+D +K+ IYD+YGS+GLY+AEQFGEENV TYF+LSS W K L 
Sbjct:   16 LYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLYVAEQFGEENVNTYFVLSSWWAKALF 110
The following BLAST results are available for this feature:
BLAST of TCONS_00070699 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DNJC51.788e-4169.47DnaJ homolog subfamily C member 5 OS=Homo sapiens ... [more]
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