TCONS_00070698 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070698
Unique NameTCONS_00070698
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2899

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070698 ID=TCONS_00070698|Name=TCONS_00070698|organism=Clytia hemisphaerica|type=transcript|length=2899bp
attcgagcctttactagcaaccctgcggggcccaaggcgccgagtatgca
cccggcacagtgacaagccgttactagcaaccctgcggggcccaaggcgc
cgaggatgcacccggcacagtgacaagccgttactagcaaccctgaccct
acctaactgttagttaatcaattcctaacaacaaaacccccggaaaattt
aaaatgtcggaatgagcaatagacaaccttcttttgagaccttgtaatta
tccttttccTACTTCGTTTTGCTCGCACGAAAATCAAcgtcaaagaaatt
ttgcaataCTAACTTTCTGTTTTACAACCTCAAATTTGTTCTCACAAATT
GAAATGAAACGTTTATGAATGGAAAGATGGTTAGGTGATCTAGTTggaat
taaatttttgtgtgAATGAAAGTTTGTGAAGTATGTCTTCAGGACAAAAC
CCTCCTCCTGAACATCCTGATGAGAAAGAACAAAATTTGTATGAAACCCT
TGGTCTTGCTAAAGATGCTACCCCTGAAGAGATCAAAAAGGCTTATCGTA
AGATGGCCCTAAAATATCATCCAGACAAAAATCCAAACAACCCTGAAGCC
ACAGAAAAATTTAAACAAATCAACCATGCACATACTATTTTATCTGACCc
aagtaaaaaagaaatttatgatCGCTATGGATCTATGGGATTGTATATTG
CAGAACAATTTGGCGAGGAGaacgTCAAGACATATTTCATGCTGAGTAGC
GGCTGGTGTAAAGGACTTATGATATTCTGCGGAATAATAACCGGTTGTTa
tttctgttgttgttgtttttgcttttgttgTAACTTTTGTTGCGGGAAGT
ACAAACATGTTGTGGAAGAGGAAGATACCCCAGATTATAATGATATTACA
AAATCGTCAGAGGATGTAACCTCTACAACGAACGGTGATGGAGTTATAGT
AGGGGAGCCTGTAGCAGCATCCCCTACTAAGAACCCTATTGTTTTGGGTG
ATGAGAGTACAGTTATAACAGAACAACCACCCTCTTATGCTAGTCTCGGA
ACCACTGACCAAACTAAGCCCAATGATACGGCAGCCGAAGGGGAGAAATA
GTGAATATgctatgttttgtttttatatggAATTTAATGGAAAATGTATG
GAATATGAGAGATTCTATTCAGGTCTCTATGTCGTGAACAGAACTAGATA
GATGACCTGAGACAGGCAGCAGTTCGATATGCTGCAATTACCGTATATTG
CTGGACATATTATCGTAACTGGAATTATATTCTCATAGAAAAGCTACACA
GATACCAGTTGAAATACGCATAGGACCTGAAATATAACCTTGCACAAAAT
GTGTAATGACCGTCTTCATATTTTCTAAACTGGAATGTAAGAAGCTCGTG
CAGATTAGAGTAAATTAATGATCTTCAAATGCTGTGTATTGACCTAAGTA
CCTAAAGGGCCAAAATTAAGTCCCTTAAGGTAATAGTACTAAAtatcttt
ctaattttttttctgaatttctaTAGGCAGGAAATCATTGAATATGCCAG
CCAAACCTTTTCAATTACAATCTTGTCCAGTATTTTAGGTATTTTTGCAT
TTAATTTAAAGGGGACTTTCCTTTTTATGACTGACGCCTTTGTCGAGAAA
AAAGTATGAATTTTCAACTAATTCTTCCTTTGGTATCCTTTGAAAGATCA
GACACAGTATCGAATTTTCAAAGAGGGTATTGTGTAATGAGTTTATATAG
GTTGAACATATTTACACTTTTAATGTGGTGCCATACCAGTTAACAAAGTT
AAATCTAAAACAAAACTATCATGGTATTacaaaagttttgttttgaattt
aacTTTCAACAGACGTAATGCCATATTTAAATGATGGTAAATATGCGCAT
CATTATTGTacttttaaacttaaaaatccTGTTATTTTGTTCATATCTta
caaaatgttattttctagCCATCCATAAATATTTGTATCTAaaattatta
ctattattttgTTACTAGGAAAAAAGAGTATTATCAAAGCCTTTGATCAA
GACAAATCGCGTTTTCTCCTTGTTTTTGTACCAAGCCGTATGAAGGTATC
TTTAGTTCCATTTAGCTAATTAATATACTTAAACGCTAGTTGCATTTGTA
ATAACCAAGTAAATATTTTAGTGTACAGTATCACAAAAAagcagagaaat
ttttatataaagtaaaattctcaaaacttttcATGTAAACATAGCGTCAA
TCTCCCTTGCTagttggggggggggttacaaCCTCCAAAAAGCCCAAAAA
AGGTGGGGGCTAaagatgtttcaaatatttgggTTGACCTAAAGTACTTG
GGGAGATGAAATCTCATCATTTAAACTGGAGGCTGAATACTTCATCTTGA
TGGTTGGGTTCAATTACAGTACTCAAATTAAAGCTCGTGaagctgaaaaa
ttatatttttatataaaatgagcaaaatatttcatcttaaTCTTCCAACA
TTGAATACCTTGTAGTACAAACTTTTAAACTGTACACTAAAATGTTAACC
TTTTTATTAAAATGATTAACTAGCCAATCAATGTAATATAAACCCTTTTT
ATTCACATGATTATCTTAAAATCTGACGTGTTCTTAACAGGCACACTGTA
GAGAAGGTCGAGCCCTTATTGTCAACCCCGTAAATTACTCGCCTTATAAA
ACTACAACATCTATGGCCCGATTTATGAACGctcaaaagacaaaaaatat
gCTGAGAATGATGTTGCTCTACCAGAATTACTGTTTTCGTTTGTTTAGAA
aagtgaatttattttttgatgtagttattatttttattacttctttaaaa
ttattgaaataattaaataaagaatGGAATACAAACTGTCTAACATTCA
Run BLAST on NCBI

transcript from alignment at scaffold_57:708705..720302-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070698 ID=TCONS_00070698|Name=TCONS_00070698|organism=Clytia hemisphaerica|type=transcript|length=11598bp|location=Sequence derived from alignment at scaffold_57:708705..720302- (Clytia hemisphaerica)
ATTCGAGCCTTTACTAGCAACCCTGCGGGGCCCAAGGCGCCGAGTATGCA
CCCGGCACAGTGACAAGCCGTTACTAGCAACCCTGCGGGGCCCAAGGCGC
CGAGGATGCACCCGGCACAGTGACAAGCCGTTACTAGCAACCCTGACCCT
ACCTAACTGTTAGTTAATCAATTCCTAACAACAAAACCCCCGGAAAATTT
AAAATGTCGGAATGAGCAATAGACAACCTTCTTTTGAGACCTTGTAATTA
TCCTTTTCCTACTTCGTTTTGCTCGCACGAAAATCAACGTCAAAGAAATT
TTGCAATACTAACTTTCTGTTTTACAACCTCAAATTTGTTCTCACAAATT
GAAATGAAACGTTTATGAATGGAAAGATGGTTAGGTGATCTAGTTGGAAT
TAAATTTTTGTGTGAATGAAAGTTTGTGAAGTATGTCTTCAGGACAAAAC
CCTCCTCCTGAACATCCTGATGAGAAAGAACAGTGAGTATATTTTTTTCC
AGGCGGTGTCAACCGAACCCTATCGAACCGATTTTTGTTATCGAACCCCC
AGGGGGTACTACCCTTGTCGACCAACGGGGGTGTTCCGCTGAGGTTCGAA
AAATGGACCCTACGTGGGACCCGAAATTTGCGAAAAAAGTGACCCTGAAT
GGGACTGAAATTCCAAAATTTTCTCAAATTTTCTACTTTTTCCCCAAATT
TTCCAAAAATAGGCACCCTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCC
CCCCCGCCCCGGATCGAACCATCAAACTTTATCGAACAAAATCGAACGAT
AGCTGTCGATGTCGATTACCGAACCCGATCGAACAGCTATCGAACTTTAC
GAAAGTTCGAGTGTTCTTTGTTCGATGAAGTTCGATTGATGTTCGATGAG
TTTGATTTAAGTTTGACGTGGTTCGATGAAAGTTCGATGTGGTTCGATGA
TTAATTCTACTTTTCTTTACCTTTCAAAAAATTTCGAGGTTGTTTAATCA
AAACACAGGCACCGTATGCTCAGTCAGGGCCTCATTGGTCTTTTATAATA
TTAGTTCGGACAGTTACATCAATATGCCTTCTTACCTGTCTTTAAAAATA
TAAATAAAAGTAATCACGGAAAAGGACGCGAAAAAAAAAGACATAAGTGT
GAGAACAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNATAAGTGTGAGAACAGAGTAATCAAACTCGTTA
GAAAAAGTACCATTAGAAGTCATAAAAAATCAACCTGAATAAATGCAATC
GGAATTCCAGAGAACTTCATAATTTCTCAAACAACATTACATTACTATGT
CAAACTCCCATCACATAAATTTTACAATTACGTCAGAGTAGACTACGCTC
GCCACCGAAGAGGTTTATTTGGAAAGGGTANNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNAACTCGATGTTACAATCCAATTATTGAAA
GTTTGTCTCGGCCTTTTTATAATGAGCGAGACATACGTTCTCTGATTACG
CAATTTTCATATAGACATTTTCGAGGCATTTTGATGTAACTGTCGGATAG
AATAAAAACATACCTGATCAACACAACCAAACCTTCTGTCTTGCGTTTAC
TCTTTCCTTCCCAACAAATTTCGTATTTGCTTATGTAGGTTTTAAAATCC
ACAAGTAATGAACCTCTTATAGCTTTATCTGAATAAATCTGGTTGAAAAC
TTTCTGTCAGGTTTCATTCCGTACGTTTTTTATCCACGTGGTGAACCGGT
TTCCCTGATTTCCCGATAATTAAAACTTGGAACTTTCCTGTGGGCGCGAT
TGGGCGTACCGCCATCGCGAAATATTTTTCGTGAAAATTTACCGTATTCT
AACGCTAATATAATCTACTTTAGGCGTTCAAACTTTCGCGAACACAAACT
TTCGCGATTTTCGCGAATTTTGGCCCTTTTCGCGAAAGTAAATGTCTTTA
AAAATTCTAGGAAGAGCCATTCGCGAAAGTTTATGCTCGCGAAAAATATT
TTTCTGTTAAATTCGCGAAAGTAAATGTCTTTAAAAATTCTAGGAAGAGC
CATTCGCGAAAGTTTATGCTCGCGAAAAATTCTTGATAAAATAGAAAATC
TGTAAAACTTCAAATTTTGAATAAAATGTAACTTTTTTGGCACTTTTTAG
CCTGCTAAAAGACTAGTAAGTCAAAGGGCAAATGTTTCAAGCCAATCTAA
GAAGTATTTGCCCCTCTAAGCCTTTTTTTTATGTGAAAATTCTCAATTTT
ACGTCTTGATTCGCGAAAGTTTATGCTCGCGAAAAATATTTTTCTGTTAA
ATTCGCGAAAGTAAATGTCGTGAATTTCGCGATTTTTTGTCCTCGCGAAA
GTTTCTGCTCGCGAAAGTTTGTACGCCTAGATAGGAAACAAATATTAAAT
TTTATTCTTTTTTTGTTCGTATTTCTAAATTTCCCGATAAAAAGAACTAT
TTACAAATTATTTTCTTTAACGGGCATTGAATCAACATTTACATATTTAA
TGATGTCATAATCAATGCCGTGCATATTTTGTCAGCGCCGTGCATATTTT
GTCAACATCTTCACAAGTGTTTCAACCGGTATTCCAACGAAGCCATATTT
TGGTTTGTACAGAAATTTCGCCCGCTCAAATCAAAACAACAAAATGNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNCACGGCATTTCCCTGGATAAAAATTCTGGTCACATGACCATCCGT
GATTTTAGACCAATGAAAACGCTTCATTTCCCCGGATTAAAGTTGTATCT
ACACTAACACGCGGGAAGTAGCTAGAAAAAGAGAGAAAAAACCGGGAGTC
AAATTAAATTATTCTCCCTTCTTGCGGCAAACATAAAAGACTTTAAGAGG
CCATTTATTTCAGAAAGGGGTGTCATATCATAAATAAATTATGTAAGTAA
GTGATATTTTAAGTACTGTAACAAGTTCATTAACAATTTTATTTTGAAGT
TTGTTTTTAAAAACAAAACTCCCGTGCTAGATGATAATTTCATTTTCTTA
ACTTATGGACCCATTTAGAAGTCTTTGTAATTCAGATCATTTGGCAGTGT
AGTTGCAGCCTATACAAGAATTGGAATCTAAAGTCTGAAGTCGTAACTCC
TTGCCAGTGACCCCGCAGAGAAATTTTTAGTTGGCAGACACTGACTTCAG
GTTGGTTTGGAAATCGTTTTATTTTGAAATGTAATCTTCACTTTAGATGA
ATACTTTTATTTATTTGGATTCATGAAAGGTTCAAGGTTTGTTTACTTTT
TATTTCAAATTATTTCATTGATTTATTAAGCTGCAATGGCTGATTGGAAA
ACGAAGATTTTTGATAGTTATCAGCGTGGGCTTGGCCGCCATTTTGAATT
TAGATTTTTTTCTCCTGTACTTGGCAATTTAGAGGTTGTTCGTAATACGC
GATTTGGCTTACGCGTAACACTTGTGCCTTTTCATTGGATAAATACCACT
AAAATATACAAGATAAGTAAACATAAATTTATCGCCTGCGAGCACGGCTT
AGCTAAGCGCACCTAGCTTATTCATTATCTAAGAATTGAAGCGGACAAAG
ATTATCGCACGGGCATGGCATGGACCAGGGGTTTAGGTACCCCCTAAGAA
AATAGGTACCCCCTGAATTTTAGGTACCCCCAAACAACAGACATTAGTAG
GTACCCCCTGTGATTGGTACCCCCTGTGACTTGAGTATATGTCAAGAAAT
GAAAAAAATTGTATATTTTTACAATTAAAAAGAAGAATGATAGTTAGATA
AAAGCAAGATAAAATATAGTTCCCAAGCCCCCAGACCTTACTGCATAAAA
GTTAGATACCCCCAGAGATCATAGGTCCCCCCTGAAATTGAAAAAAAATC
CAGCCCCCAGCCTTTTTCAGGAAGATTTTGGTTGTAGCCCCCCCCTGCGG
GCTGGGGGGGGGGTTCATGCCATGGACAGGCTGATAGCAGAGAAAGGGTT
TTTGAAGATATTTTCAGTTATAATCCAAGGTAGAACAAACTAAACATAGA
AAGGGGGTATTTTTAGTGCTCTATACGATGATCGGTATTTTTTTTTAATT
CTATGTTTAGATTTTTCTACCCAGCCCCTTTGCTATGTACGCGCGCCCTG
TTGCTACAACGTTTGTTTGAAATCGAAAGCGAAACCAAAATAATTTAGCA
CACACTGCCATTTGCGTAATATAAAATAAATGAAAGGAGGCCCTGACTGT
GTAAAAGCTCCAGCTTGTCCCATCCGATGGGATAGATATAGGATGGCCTG
CGAGAATGGCCTGTTGGCGGCAAGGTATAAATCGATTTAATCGAACCAAT
TGAACTTCATCGATCTTAATCGAACCAATTGAACTTCATCGATCTTAATC
GAACTGATCGAACTGCAATCGAACTATAATCATATAATCGAACAGTCATC
AAACTTTACGAAAGTTTTCCCGGTTCGATAGGTGTTCAATTGGGTTCGGT
AATTGAACAGCTATCGTTCGATAGGGTTCGATTAAGTTCGATTAGTTCGA
TAATCGAACAGTTCGATTGACACCGCCTGGTTTTTTAAACACTTGTGTTG
TTCTCTTGATTCAAGTATCATGACTTCACTTTATTTTAAGCTTCAAAGGT
TAATAATGCTATGAACTTTTTCTTTGACTCTTTCAGTCTTATGCTGGTGC
TGTGGTATATAAAACAATTTGGGAAAAACTGTGTTCTGTTTTCAAGGCTG
GGATGATCACAACTTGTGTTTACGTTGTTCAACTGATTTAATAATTTTCT
TACATTTCCAAATCTTTTGAGATTTCCAGAACTAACAAATTTTTTGAAAT
TCTTTAAAAAAGTCCAAGTTCCTAATTAGTTCTACTATCAGTGAAATACT
CATTCATCTACCTAAGAGGAAATTCTGGCAGGAAGAAATTTTGGCGATTT
TATAATAAAATTTCTAAATTTGGTGAGAATTAATTTTGGCTTGTTCCCAT
TTTTTGTTGAATATTTAAGCTTAAGGTGGAGCCTTCCCAACTCAGACTTG
CCAAGGAAAACGTCAATGAACGTTTTCATTTTGAACCCCTATACACCCTT
CAAATAATGATCTCAAAATATTCAACCCTTCTCAGGCACTTTTTTGGGTG
ATAATATTTGCTGTGATTTTACTTAGAATTTTACTTTAACTCTGTTACCC
CCGTCCCACGCCGCCTTGACATGAGCAAGGGAATCATGTTGGCCTCTCCC
TGCCTCTCCTGAAAATTTCAGATCAAAACAAAGACTCCTGAAATTTTTGA
TTGTCAATATATTTCTTATTTGAAAGAAAGTATTTGCTTCATGGAATAAA
AAGATATACCTTATTGGAACAAACTGGCAAAATTCTAGAATGAAAAAAAC
TGTGAAAACTAAAACTTGCAAAATGTAATTTTTCGGATATTTTTTTCAAC
CGCAAAAATTAGTTCCCCCGAACATTAGTTCCAATAAGGTAGTCAAATCT
TGTAGGGTCATTTTTCCAAAAAATTTGCCTAGATTGATTTCGCATTTTGC
TATTTTACCCTACGCAAACGAACGTGGGCATGGCCTGAACTTTCGCTGGT
CAGGCGAAGATGACCCACACTGACCCACATTGACCCAAACAAGTTCNGAA
CTTTCGCTGGCCAGTCGAAAATGACCCACATTGACCCACATTGACCCACA
CAAGTTAGAATCATGTTCTGGTAACTTTTTTGTGACTGATCATCGAAGCT
CTGTGTTAAGTACAGACCCATTTTAATGAATTTATTCTTAAAAAGTTTTT
GAGTAAATTGAGGTCAAAAATAATTATTTTTCACAAAATAAAATTGAGAA
TTGACAATAATTGACAATATCTGTGTTTCTTTTTAAATAAAATTTCTTTG
ATTTTTGCAACTTGTTGGTCCTGATTTTATTTGTCTTCTGCAAGTTGTTC
CCGTCAACACGCGTTAGAGCACGGAACTTCGACCCTCAGTTTAATTCTTC
TAATTTCTTTTATTTTGTATTTGATTTACACTTTTTAATGCTTTATACTG
GAATTGAATCAGCCTTGGAATTGGACTACTTACTATTGGAATAATCTTAA
ATTGAACTACAACTGTACATTGAACATATTTGAACAACAAGAGAATATTG
TTTTTGGGCTCAAACATGGCCCGAACATGGCCCGAACATGGCCCAACAGT
GTTCAGGCCTTGTTAGGGCAATGCTGTTGGTCGTTGCCAATCTTTATTTC
AATTAATTATTGATTGCACAAGAGTTCTATTTCAAAATATAACAGAGATG
ATATCCAACGCTTATCCTATGAGCTTACAGTCAAATATGTCCTTCCCCCT
TTATTATAAAGGGGATTATGATTTTGCCCCTTTTTTTGAGGTATATATCA
GGAAAATGAAATTTTGATTGGTAGGCCACAATCACAAATAACTGTTCAAA
TCTGAAACTAGGAAATTTTTCTGAAAATCAGGAAAACTGTTTCCCAAAAA
TTGGAATATCAGGGAAATTTTTCTCAAAACTCCAAAATTCTTGAGAAATC
AAACTTTTCCAAAATTGCGTGAGACAATGTGGAAATGTGTAAGTCTCGTA
CCCAATGCATGAGAGTTGGCACTTCTGTTTTTGGGAAGGGGACAGCAATT
TCTCACTATTGCTAGAATTGTCAGAAATAACATAACAAAAACCATTAAAT
TATTCCAATTCTTTTTACAGAAATTTGTATGAAACCCTTGGTCTTGCTAA
AGATGCTACCCCTGAAGAGATCAAAAAGGCTTATCGTAAGGTAAGTGCAC
GTTTTTTTTTAAGAAACACACTTTTAAGAAACATGAGGCTCAGAATGCCT
AAAAACTAAGAAACATCTAAGAAACATGCTTAGGCTGAGAATGAGAAAAT
AGCATTTTTTAATTCGTTTTTTTAAGAACCTTCCAATCAAGGTTCCAGAA
ATATACATACATAACAGTTAGAAACACTTGAGANNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NCGTAGATTAGTCAATTAGACTATTGTATTATCGACATGCGTCCTTTAAG
CTTGACAAAGTTTAGAAACATGTAAGAAACATTTAAGGCTCAAAAGGCCG
ATTTCATAAGAAACATTAAGCCAGCTTGGTAAAACTAGTTTCTTAAAAAA
AAACGTGTACTGCAGAAAGGAAAAAATATCTTTTCAATAGAATTCAGCAT
CTCATGTCAAAACCTGACATGAATTAATTTATTAAACCTACATTTCTACT
ATTTTCAGATGGCCCTAAAATATCATCCAGACAAAAATCCAAACAACCCT
GAAGCCACAGAAAAAGTAAGTTCAATTTGTTGTTTCACCTTATTTTAGCA
AAGCATAATGATCAATACCAAAGGAAGGGTCTAAAATTCATGAAAGAAAT
CAGACGTGACAGAAGCGATTATATTTGGTTACAAGAGGGAAAGATCTTCA
TTAAAGCCACTATTAGTAATATACCAGTTTTTGTATTGGTCCTGATAGAA
ATCATGGATTTTATTCCTCTATGAGAATAAATTTTTGGACTTTTTTATCT
AGCAGCATTTTCTATCTTTTTTTTACAGTTTAAACAAATCAACCATGCAC
ATACTATTTTATCTGACCCAAGTAAAAAAGAAATTTATGATCGCTATGGA
TCTATGGGATTGTATATTGCAGAACAATTTGGCGAGGAGGTAAGTTTTCC
CATAAAAATTCATGGATTGAGCTAGTCTCCTTGAAGTGATGGAAAGAACT
CTGGCACTTTAGTGGGTCAAAGAATAAAATGCTCACTGTTTTCTTCAGTT
TTGGTCATTTTAGACGTATTTCTTATTATGAAATTTTTGGACTTTCACCT
TTCTGTGGTTCAGCGAAAAACCTAGAAAATTAAGCAATATTAATTTCTGC
ATTAGTTTATCCATACTAACTTTTCTGCCAAACTTGTCTTGTAAAATTTT
CCTCCATTTTTCTTTTCAGAACGTCAAGACATATTTCATGCTGAGTAGCG
GCTGGTGTAAAGGACTTATGATATTCTGCGGAATAATAACCGGTTGTTAT
TTCTGTTGTTGTTGTTTTTGCTTTTGTTGTAACTTTTGTTGCGGGAAGTA
CAAACATGTTGTGGAAGAGGAAGATACCCCAGATTATAATGATATTACAA
AATCGTCAGAGGATGTAACCTCTACAACGAACGGTGATGGAGTTATAGTA
GGGGAGCCTGTAGCAGCATCCCCTACTAAGAACCCTATTGTTTTGGGTGA
TGAGAGTACAGTTATAACAGAACAACCACCCTCTTATGCTAGTCTCGGAA
CCACTGACCAAACTAAGCCCAATGATACGGCAGCCGAAGGGGAGAAATAG
TGAATATGCTATGTTTTGTTTTTATATGGAATTTAATGGAAAATGTATGG
AATATGAGAGATTCTATTCAGGTCTCTATGTCGTGAACAGAACTAGATAG
ATGACCTGAGACAGGCAGCAGTTCGATATGCTGCAATTACCGTATATTGC
TGGACATATTATCGTAACTGGAATTATATTCTCATAGAAAAGCTACACAG
ATACCAGTTGAAATACGCATAGGACCTGAAATATAACCTTGCACAAAATG
TGTAATGACCGTCTTCATATTTTCTAAACTGGAATGTAAGAAGCTCGTGC
AGATTAGAGTAAATTAATGATCTTCAAATGCTGTGTATTGACCTAAGTAC
CTAAAGGGCCAAAATTAAGTCCCTTAAGGTAATAGTACTAAATATCTTTC
TAATTTTTTTTCTGAATTTCTATAGGCAGGAAATCATTGAATATGCCAGC
CAAACCTTTTCAATTACAATCTTGTCCAGTATTTTAGGTATTTTTGCATT
TAATTTAAAGGGGACTTTCCTTTTTATGACTGACGCCTTTGTCGAGAAAA
AAGTATGAATTTTCAACTAATTCTTCCTTTGGTATCCTTTGAAAGATCAG
ACACAGTATCGAATTTTCAAAGAGGGTATTGTGTAATGAGTTTATATAGG
TTGAACATATTTACACTTTTAATGTGGTGCCATACCAGTTAACAAAGTTA
AATCTAAAACAAAACTATCATGGTATTACAAAAGTTTTGTTTTGAATTTA
ACTTTCAACAGACGTAATGCCATATTTAAATGATGGTAAATATGCGCATC
ATTATTGTACTTTTAAACTTAAAAATCCTGTTATTTTGTTCATATCTTAC
AAAATGTTATTTTCTAGCCATCCATAAATATTTGTATCTAAAATTATTAC
TATTATTTTGTTACTAGGAAAAAAGAGTATTATCAAAGCCTTTGATCAAG
ACAAATCGCGTTTTCTCCTTGTTTTTGTACCAAGCCGTATGAAGGTATCT
TTAGTTCCATTTAGCTAATTAATATACTTAAACGCTAGTTGCATTTGTAA
TAACCAAGTAAATATTTTAGTGTACAGTATCACAAAAAAGCAGAGAAATT
TTTATATAAAGTAAAATTCTCAAAACTTTTCATGTAAACATAGCGTCAAT
CTCCCTTGCTAGTTGGGGGGGGGGTTACAACCTCCAAAAAGCCCAAAAAA
GGTGGGGGCTAAAGATGTTTCAAATATTTGGGTTGACCTAAAGTACTTGG
GGAGATGAAATCTCATCATTTAAACTGGAGGCTGAATACTTCATCTTGAT
GGTTGGGTTCAATTACAGTACTCAAATTAAAGCTCGTGAAGCTGAAAAAT
TATATTTTTATATAAAATGAGCAAAATATTTCATCTTAATCTTCCAACAT
TGAATACCTTGTAGTACAAACTTTTAAACTGTACACTAAAATGTTAACCT
TTTTATTAAAATGATTAACTAGCCAATCAATGTAATATAAACCCTTTTTA
TTCACATGATTATCTTAAAATCTGACGTGTTCTTAACAGGCACACTGTAG
AGAAGGTCGAGCCCTTATTGTCAACCCCGTAAATTACTCGCCTTATAAAA
CTACAACATCTATGGCCCGATTTATGAACGCTCAAAAGACAAAAAATATG
CTGAGAATGATGTTGCTCTACCAGAATTACTGTTTTCGTTTGTTTAGAAA
AGTGAATTTATTTTTTGATGTAGTTATTATTTTTATTACTTCTTTAAAAT
TATTGAAATAATTAAATAAAGAATGGAATACAAACTGTCTAACATTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043982XLOC_043982Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070698-exon-scaffold_57-1575043694:719821..720302TCONS_00070698-exon-scaffold_57-1575043694:719821..720302Clytia hemisphaericaexon
TCONS_00070698-exon-scaffold_57-1575043694:712213..712282TCONS_00070698-exon-scaffold_57-1575043694:712213..712282Clytia hemisphaericaexon
TCONS_00070698-exon-scaffold_57-1575043694:711538..711594TCONS_00070698-exon-scaffold_57-1575043694:711538..711594Clytia hemisphaericaexon
TCONS_00070698-exon-scaffold_57-1575043694:711164..711274TCONS_00070698-exon-scaffold_57-1575043694:711164..711274Clytia hemisphaericaexon
TCONS_00070698-exon-scaffold_57-1575043694:708705..710883TCONS_00070698-exon-scaffold_57-1575043694:708705..710883Clytia hemisphaericaexon
TCONS_00070698-exon-scaffold_57-1510915933:719821..720302TCONS_00070698-exon-scaffold_57-1510915933:719821..720302Clytia hemisphaericaexon
TCONS_00070698-exon-scaffold_57-1510915933:712213..712282TCONS_00070698-exon-scaffold_57-1510915933:712213..712282Clytia hemisphaericaexon
TCONS_00070698-exon-scaffold_57-1510915933:711538..711594TCONS_00070698-exon-scaffold_57-1510915933:711538..711594Clytia hemisphaericaexon
TCONS_00070698-exon-scaffold_57-1510915933:711164..711274TCONS_00070698-exon-scaffold_57-1510915933:711164..711274Clytia hemisphaericaexon
TCONS_00070698-exon-scaffold_57-1510915933:708705..710883TCONS_00070698-exon-scaffold_57-1510915933:708705..710883Clytia hemisphaericaexon
TCONS_00070698-exon-scaffold_57-1491911889:719821..720302TCONS_00070698-exon-scaffold_57-1491911889:719821..720302Clytia hemisphaericaexon
TCONS_00070698-exon-scaffold_57-1491911889:712213..712282TCONS_00070698-exon-scaffold_57-1491911889:712213..712282Clytia hemisphaericaexon
TCONS_00070698-exon-scaffold_57-1491911889:711538..711594TCONS_00070698-exon-scaffold_57-1491911889:711538..711594Clytia hemisphaericaexon
TCONS_00070698-exon-scaffold_57-1491911889:711164..711274TCONS_00070698-exon-scaffold_57-1491911889:711164..711274Clytia hemisphaericaexon
TCONS_00070698-exon-scaffold_57-1491911889:708705..710883TCONS_00070698-exon-scaffold_57-1491911889:708705..710883Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_57supercontigscaffold_57:708705..720302 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
32.2279	33.1019	25.3387	29.406	11.1692	9.01511	15.3071	18.7942	13.9163	10.4752	12.0172	9.48819	18.6772	19.1741	18.6286	24.411	21.6826	24.2892	13.2525	16.6584	24.4207	23.8771	32.599	32.9253	15.9582	17.6488	22.8925	20.6677	27.8031	31.5753
Blast
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BLAST of TCONS_00070698 vs. Swiss-Prot (Human)
Match: DNJC5 (DnaJ homolog subfamily C member 5 OS=Homo sapiens GN=DNAJC5 PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.087e-41
Identity = 66/97 (68.04%), Postives = 84/97 (86.60%), Query Frame = 1 
Query:  481 QNLYETLGLAKDATPEEIKKAYRKMALKYHPDKNPNNPEATEKFKQINHAHTILSDPSKKEIYDRYGSMGLYIAEQFGEENVKTYFMLSSGWCKGLM 771
            ++LY  LGL K+AT ++IKK+YRK+ALKYHPDKNP+NPEA +KFK+IN+AH IL+D +K+ IYD+YGS+GLY+AEQFGEENV TYF+LSS W K L 
Sbjct:   14 ESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLYVAEQFGEENVNTYFVLSSWWAKALF 110
The following BLAST results are available for this feature:
BLAST of TCONS_00070698 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DNJC52.087e-4168.04DnaJ homolog subfamily C member 5 OS=Homo sapiens ... [more]
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