TCONS_00070647 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070647
Unique NameTCONS_00070647
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1843

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070647 ID=TCONS_00070647|Name=TCONS_00070647|organism=Clytia hemisphaerica|type=transcript|length=1843bp
GAAAAACTTCATCTTATTGTGTCTTTCATTGAAACCAACTATATAAAAGG
CTCGtggttttatttttcaaatatacaaTCAACCCAAAAGAACATAACAA
GacttgaaaaaataccaaggcTGGACCCTGGTAGAATTCAACTTTAACCT
TTAAACTTCAATATCTGGAGAGGAGTCATTCAACACAATTTTCAGCAGCT
CAAAACACTGAAGAAAGTAGAAGATATAAAGTAAATCACAGTTCTATTGA
AAGATTTGGCAAAAATGCAGCTTTTACCAATTTTAACATTCACAATCATA
TGTACATTCAACCAATTATCAACAGCTTTCAAACACAACGTTGGCAATCC
TGACTTCTTACCCTTTTTTCCGTTTTTCCCGTACGGGAAAGGGTTCGATT
ACGTGCTTACAGATCCACCAAATTATGTGTTCGCCGAGGGAGATGAAGAT
TATGGAATATTTGATCATTACCTGAGTAAAGAGCTcccgatttttcaaaa
tccaaacaCGCGGTGGATATTTGTTGGAGTCAACGGTTATGTCTCATTCA
CTGAGCCTTGGTACAGCAACGGTGCAGATAAATTCCCTCAGGCTGGTCCT
GGAATTAGTCTTTTCCAAACAGACCTTGTTTTCACGGATGCAAAAGATTC
ACATCTCTCTTTTAAAGAGTACGATGAAGAAGATAAAGACATTATGGAGC
ATGCGCGAAATGAATTGGAGGTGTACGCCAATCTAAAAGATTTCGATCCT
AACCACGTGATTGTTGTCACGTGGCATAAAGCATCAAAGAAAGACAACAA
AGGAAATGTAACTTTCCAACTAGTACTTGCTTCAGATGGTTTCAACACCT
ATGCCATCTTGAATTACGAAGATATTACGATTAGTCTCCAGCGAAAAGAT
TTCTGCCCTGTAACAATTGGTTGGCAAGAAGACCTCCAACGTTATGTtga
acatgaaaacatgcaactCACCCAAGCCTTCCCTTATAGACCAATCAGAA
TGTCTAAGAAATCAAACATCGGTTTCCCTGGAAAATGGATTTATAAACTC
TTTGGAACCAAAATTGCAGAAGAAAACAAACCATCGCCAGTGCCAACTCG
ACCAGCAAACATCAAACATCTTCCCGCTGAATGCCCTGGAAACGATTTCT
GCCAAAATACCAAAAACGTTTTAAATGTATGGCCCGGTTATTCCACCTTC
TATGTAGTATGTCCACCCGGTGGCGCACCCGTATGTATGCCATGTGCGGA
AGGGACCGCCTTTAGTCCGGAATGCAGGACGTGCGTTCATACAAGTCAAC
TTGGACAGCCAAAGGATAAACTTTGTCCACAACCATCGAAGAAGATGGAA
GATCGAGTGAAACAAACTGCAAGATGCAACCATGCTGATGCATTACGTCA
CTGTACCATGCGTGAGAACCAATTACATGACGGTCAAAAGAAAACACAAC
ACACCACAAGCTACCGAAACCATAACGACGTCAATGGAGCGTCATATTAT
CTTTGTGCCGGTGCTGTTGGTAGTTTTTGTATGCCTTGCCCTGCAGGGAC
CGTTTTTCAACAGTATGAGCATGATAAGAATAACGGCGCATGCGTACATA
AAAGCCCAAAGACGCATGCTGAATGGATTTAGATTGACCATGGAAGATTG
GAACTTTGTATGGTAAAAACACGAAAAACGAAAACAGTTAATCAATGACA
CTGCCTCACTACATCTTATTTGATTTTGTtaaccaatgacgtcacggTTT
GATGATAGCATAGGATGTCATATACATATATTGACATTAAACCATTACAA
TTAGCAGCACGTTTCAGAGAACCTTTTTGTAAGGGAAAATGTC
Run BLAST on NCBI

protein sequence of TCONS_00070647-protein

>TCONS_00070647-protein ID=TCONS_00070647-protein|Name=TCONS_00070647-protein|organism=Clytia hemisphaerica|type=polypeptide|length=455bp
MQLLPILTFTIICTFNQLSTAFKHNVGNPDFLPFFPFFPYGKGFDYVLTD
PPNYVFAEGDEDYGIFDHYLSKELPIFQNPNTRWIFVGVNGYVSFTEPWY
SNGADKFPQAGPGISLFQTDLVFTDAKDSHLSFKEYDEEDKDIMEHARNE
LEVYANLKDFDPNHVIVVTWHKASKKDNKGNVTFQLVLASDGFNTYAILN
YEDITISLQRKDFCPVTIGWQEDLQRYVEHENMQLTQAFPYRPIRMSKKS
NIGFPGKWIYKLFGTKIAEENKPSPVPTRPANIKHLPAECPGNDFCQNTK
NVLNVWPGYSTFYVVCPPGGAPVCMPCAEGTAFSPECRTCVHTSQLGQPK
DKLCPQPSKKMEDRVKQTARCNHADALRHCTMRENQLHDGQKKTQHTTSY
RNHNDVNGASYYLCAGAVGSFCMPCPAGTVFQQYEHDKNNGACVHKSPKT
HAEWI
Run BLAST on NCBI

transcript from alignment at scaffold_57:654352..660096+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070647 ID=TCONS_00070647|Name=TCONS_00070647|organism=Clytia hemisphaerica|type=transcript|length=5745bp|location=Sequence derived from alignment at scaffold_57:654352..660096+ (Clytia hemisphaerica)
GAAAAACTTCATCTTATTGTGTCTTTCATTGAAACCAACTATATAAAAGG
CTCGtggttttatttttcaaatatacaaTCAACCCAAAAGAACATAACAA
GacttgaaaaaataccaaggcTGGACCCTGGTAGAATTCAACTTTAACCT
TTAAACTTCAATATCTGGAGAGGAGTCATTCAACACAATTTTCAGCAGCT
CAAAACACTGAAGAAAGTAGAAGATATAAAGTAAATCACAGTTCTATTGA
AAGATTTGGCAAAAATGCAGCTTTTACCAATTTTAACATTCACAATCATA
TGTACATTCAACCAATTATCAACAGCTTTCAAACACAACGTTGGCAATCC
TGACTTCTTACCCTTTTTTCCGTTTTTCCCGTACGGGAAAGGGTTCGATT
ACGTGCTTACAGATCCACCAAATTATGTGTTCGCCGAGGGAGATGAAGAT
TATGGAATATTTGATCATTACCTGAGTAAAGAGCTcccgatttttcaaaa
tccaaacaCGCGGTGGATATTTGTAAGTTGATTCTTAGTTTtagtatttt
gattttgaaattcacctttcgataatattgaaagccacTGCCAACGAGAA
ACTTTCATAAACGACGCTTTACCATTCGATAcgttcccttattcgatgaa
aatctaatttAGAGACAACAACTGTAAATTAAGTTGGCTCTCTGAATTAA
TTGACCTTCAAtcgacaaaaaatattttcttcaaaatagaGAATTTTAGA
GAGCATTTTATTTGTCTTGAGAGGGCAAatatttagttcgaattatagaa
agactCGAATCcaagaggttcgaattagagagagttgactgtatgaAAAA
ATAGGACATTGGACTGCAATGCTTAATAACATAAACAGACACCCTTATCT
CGTCAAGTGACCTAGCAAGAGGTTTTTTAGGCCGTACTCGTcctctctga
tatgttttgatataggagCTGTGTATcgtataaaaaaaacaaaaatacgg
gtgtaactctcggacgggaattttttacACGATACGCATTCCTTTTATCA
AAATCAAACCTGGATAACACACAGCCTAGAGTTTTTAGCATATAAGGAAA
ATCTTAGGGAGCTGAAATATATCCAGATATGGTTAATGAAGATCATGCTA
CAGTTAGTGCCTTTATCCTAGACCCAGCTGacacgttttttcaacgttta
tctaatattcacaacgtccaaataatattagattaacgttgaaagaacgt
tgtgtgccaagtGGGGAGGGTAGATGACTGAAAACCAAATAACTATTTAC
ATTGGGAAGGGTAAAACCTAGTAACGCTTAAGTGGTTCTTAGTCCACTAT
TTTCACTTCATCAAAATCCTTCACATAAAAAACGTTTGTTGCTTCCTGTT
TAAAATTTACGCGTTAGTTGTCAAATTATATCCAAATGGTTTGTCGTACA
GCTGTCATTAAAATCCGGAAAAAGGGAAAACAATCTCATGCAACCGCAAT
TTTGTTAATGAGTTTTCTAACAATATTGGGAGATGAATAATAACAACGTT
AAGTTCCTGGTTTTGTTTTTCTACGTTTGTCGACAATTTGTCGTAATTTG
ACCTTCTCGTCGACGTCGACGTCGACACCCGGAAAACCGTTAAACTGACC
CTTTTATGTACCGAAATATCCTCATAATGATTTATAACTTTATATGGTAT
ACGTTTCtcgatttttctttttaaacttttactaTGGAACAGGAACTTTT
TCCAATTAAGATCTTGAACTTTGTCTGATTTCACTGTCACACAGATTCtt
gttttgggattttttaccataaaaaattcTAACTTCACTAGCTTTAGCAA
CGACCTATAATTAAACTCGTATTCATTTTTCCATAAATAATCCAACTGAT
GATTGCATAATTGATGCATGATTAAAACAAGCGGTTTtggtcaaagaaaa
attactgtTTCTTAAAATgaattaattatttaattattccACAGGTTGGA
GTCAACGGTTATGTCTCATTCACTGAGCCTTGGTACAGCAACGGTGCAGA
TAAATTCCCTCAGGCTGGTCCTGGAATTAGTCTTTTCCAAACAGACCTTG
TTTTCACGGATGCAAANTTCATTCACCGAGCCTTGGTACAGCAACGGTGC
AGATAAATTCCCTCAGGCTGGTCCTGGAATTAGTCTTTTCCAAACAGACC
TTGTTTTCACGGATGCAAAAGATTCACATCTCTCTTTTAAAGAGTACGAT
GAAGAAGATAAAGACATTATGGAGCATGCGCGAAATGAATTGGAGGTGTA
CGCCAATCTAAAAGATTTCGATCCTAACCACGTGATTGTTGTCACGTGGC
ATAAAGCATCAAAGAAAGACAACAAAGGAAATGTACGTCCATTTTAACCA
GATTTTCTCTAACTAAAAAGCAAACCTTTGATCTCCCTTGTGGATTTCCC
AATACTATGTACACGAGTGTATCCCATGCATAACATAGTGTAATactatg
aattttgaaatttctgattGGTCCACAATCAAGAATAAAAGACAAATCAT
TTTTTGATTGATGCACAGACAGCCCCATTcttaatttccaaaagaaaaaa
actgtctaACTATAAACCCTTATATCTGAAATTTTGAAGTTAGCCTTTAG
GCCCTCAGCTTTACCCTGTTACCTTGCCTCTACTGTTTTGACGTAGTTCG
TGTTTGAATGCAACTGTTAAAGAGATCGTGAGAAAAGAAACCGTTTCCAG
TGTGTCCATACTATCGTAAAAGATATTGGACAAATTGAGTACTTGGAATT
CTAACCGATTTCtctttcctttgttcttttagGTAACTTTCCAACTAGTA
CTTGCTTCAGATGGTTTCAACACCTATGCCATCTTGAATTACGAAGATAT
TACGATTAGTCTCCAGCGAAAAGATTTCTGCCCTGTAACAGTAAGTCAAT
TTTTTGAATGCACCCTAGGTATGGTTACCCGCCATTTTTTATCACAGTCT
TTAGAAATTTGGTACCCTATGTGAGGACTATTCGACGTAATTCAATTTTT
AACACGATATTGTTCGCTCTAAAATAtggttcccttttttgtccaaattc
tgctgtattagcctccttttcaaaaatcttccacccaggacatttttatt
ccaatccACCCGCTTatcaagttttgagattttttccaacccccccccct
cccccccccccccccgcttatcaagttttgagatttttcccaaccccccc
ccctcccccccccccccccgcttatcaagttttgagatttttcccaaccc
ccccccctcccccccccccccccgcttatcaagttttgagattttttccc
ccccccccccccgcttattccaatccccccggctattatGTACCCGAGAG
TGTTCCATGAGGATATCATATTCAAACATTTCGTTCAGGCAGCATCGAAG
AACTGTCTTCAGGGTTTTATATATAGCTCTTCAGTGGATCATAATAgtga
ataatttcaatttcttcttttaataaCAGATTGGTTGGCAAGAAGACCTC
CAACGTTATGTtgaacatgaaaacatgcaactCACCCAAGCCTTCCCTTA
TAGACCAATCAGAATGTCTAAGAAATCAAACATCGGTTTCCCTGGAAAAT
GGATTTATAAACTCTTTGGAACCAGTAAGTCACTATGATAGGTTTTCAGC
AAATTCAAATGTTTTCCATTCTTGTATAGggtttttcttataagctttTT
GTCAGTTCCTTGTTTCTGTATAGACCGATTCGTGTGACAACATTTTCACC
CACGATcagccatttttctaagaaatgttTCTACCAATATGCACAAGATG
ATTTCCCTAACTGGATTTAGCCCAATCGGTCTATACAGTTGGCTGTGACT
CTCACTAATTCGAGCCTGATAATCTGACTGACGGAGAGACtcggaaaata
gaaaaaaaccctgtgtcacagacccgctgggaacccagccccactggaaa
attgactttcatttcatccccattcgaaattcaatgtttataaATTGCAC
TCCagaaccatccccactggattttataccttggaacaatagaataaTTA
TCCCCTGTAtaatttcgatagaaattttaatccccactgaggaaaaagtt
ccatcGGGATGTGAGAAAGCAGGAAAGAGAAGACGCTTGAGTATGAGATT
AGAGATGAATTAGCAAAAAACTCTAAATAAAAGATTGCTAGAtagattct
ttttttaaaggatgtactatcagaaaaatgtttAAACAAGCAATTTTATC
ATTTCTTCTTCATAGAAATTGCAGAAGAAAACAAACCATCGCCAGTGCCA
ACTCGACCAGCAAACATCAAACATCTTCCCGCTGAATGCCCTGGAAACGA
TTTCTGCCAAAATACCAAAAACGTTTTAAATGTATGGCCCGGTTATTCCA
CCTTCTATGTAGTATGTCCACCCGGTGGCGCACCCGTATGTATGCCATGT
GCGGAAGGGACCGCCTTTAGTCCGGAATGCAGGACGTGCGTTCATACAAG
TCAACTTGGACAGCCAAAGGATAAACGTAAgtcaaatctttgtcaaattc
aaaaaatcttaaagatTTAAACAAGTTATCTTTCCCgaaaaatattactt
ttcattCCTAGATACTTATCAAAATAGGCTCAATTATATTATATCCCTTG
TGCCATCATATCTCATTAGCCTAAAGCCCAAAGCCCAAAACTTTCTCCCT
TGAAAACCATAAACTAAACTCACAATATTAATTATTCACATTTTTCTTAA
TCTTTTCTACAGTTTGTCCACAACCATCGAAGAAGATGGAAGATCGAGTG
AAACAAACTGCAAGATGCAACCATGCTGATGGTAAGACAATATTTTCCAT
TGAAACTCTCTCATGTCCTTCAAATAGTTTTTCTTCAGTCACGAATACTT
GAGGCAGAGGAATGTCTGtaatttcaaaggaaaatctcttcattttcaaa
gaaaagtgTCTGGTTTTTAATAGAATCAGCCAAAGTTGTATTCCAAAGCT
TTTTGTTGTTAGATGAAATTTTTACGGCTTGAAAATTCTTCTATTTATGC
TTTAAAGACgctttaaaacactttaaaaattacctcaaaagtttactttt
ttcaataatttttgaaatgtaaGGCTCGGATTTTTCTTAATTTAAtaagt
ttttgccaaattttagtctcattttcttatgaaaatgtaaccaaaaaggt
ttttcaaagactTATTTTCAACTAACTTTTTTGTCACTTTAGCATTACGT
CACTGTACCATGCGTGAGAACCAATTACATGACGGTCAAAAGAAAACACA
ACACACCACAAGCTACCGAAACCATAACGACGTCAATGGAGCGTCATATT
ATCTTTGTGCCGGTGCTGTTGGTAGTTTTTGTATGCCTTGCCCTGCAGGG
ACCGTTTTTCAACAGTATGAGCATGATAAGAATAACGGCGCATGCGTACA
TAAAAGCCCAAAGACGCATGCTGAATGGATTTAGATTGACCATGGAAGAT
TGGAACTTTGTATGGTAAAAACACGAAAAACGAAAACAGTTAATCAATGA
CACTGCCTCACTACATCTTATTTGATTTTGTtaaccaatgacgtcacggT
TTGATGATAGCATAGGATGTCATATACATATATTGACATTAAACCATTAC
AATTAGCAGCACGTTTCAGAGAACCTTTTTGTAAGGGAAAATGTC

Coding sequence (CDS) from alignment at scaffold_57:654352..660096+

>TCONS_00070647 ID=TCONS_00070647|Name=TCONS_00070647|organism=Clytia hemisphaerica|type=CDS|length=10944bp|location=Sequence derived from alignment at scaffold_57:654352..660096+ (Clytia hemisphaerica)
ATGCAGCTTTTACCAATTTTAACATTCACAATCATATGTACATTCAACCA
ATTATCAACAGCTTTCAAACACAACGTTGGCAATCCTGACTTCTTACCCT
TTTTTCCGTTTTTCCCGTACGGGAAAGGGTTCGATTACGTGCTTACAGAT
CCACCAAATTATGTGTTCGCCGAGGGAGATGAAGATTATGGAATATTTGA
TCATTACCTGAGTAAAGAGCTcccgatttttcaaaatccaaacaCGCGGT
GGATATTTGTTGGAGTCAACGGTTATGTCTCATTCACTGAGCCTTGGTAC
AGCAACGGTGCAGATAAATTCCCTCAGGCTGGTCCTGGAATTAGTCTTTT
CCAAACAGACCTTGTTTTCACGGATGCAAAAGATTCACATCTCTCTTTTA
AAGAGTACGATGAAGAAGATAAAGACATTATGGAGCATGCGCGAAATGAA
TTGGAGGTGTACGCCAATCTAAAAGATTTCGATCCTAACCACGTGATTGT
TGTCACGTGGCATAAAGCATCAAAGAAAGACAACAAAGGAAATGTAACTT
TCCAACTAGTACTTGCTTCAGATGGTTTCAACACCTATGCCATCTTGAAT
TACGAAGATATTACGATTAGTCTCCAGCGAAAAGATTTCTGCCCTGTAAC
AATTGGTTGGCAAGAAGACCTCCAACGTTATGTtgaacatgaaaacatgc
aactCACCCAAGCCTTCCCTTATAGACCAATCAGAATGTCTAAGAAATCA
AACATCGGTTTCCCTGGAAAATGGATTTATAAACTCTTTGGAACCAAAAT
TGCAGAAGAAAACAAACCATCGCCAGTGCCAACTCGACCAGCAAACATCA
AACATCTTCCCGCTGAATGCCCTGGAAACGATTTCTGCCAAAATACCAAA
AACGTTTTAAATGTATGGCCCGGTTATTCCACCTTCTATGTAGTATGTCC
ACCCGGTGGCGCACCCGTATGTATGCCATGTGCGGAAGGGACCGCCTTTA
GTCCGGAATGCAGGACGTGCGTTCATACAAGTCAACTTGGACAGCCAAAG
GATAAACTTTGTCCACAACCATCGAAGAAGATGGAAGATCGAGTGAAACA
AACTGCAAGATGCAACCATGCTGATGCATTACGTCACTGTACCATGCGTG
AGAACCAATTACATGACGGTCAAAAGAAAACACAACACACCACAAGCTAC
CGAAACCATAACGACGTCAATGGAGCGTCATATTATCTTTGTGCCGGTGC
TGTTGGTAGTTTTTGTATGCCTTGCCCTGCAGGGACCGTTTTTCAACAGT
ATGAGCATGATAAGAATAACGGCGCATGCGTACATAAAAGCCCAAAGACG
CATGCTGAATGGATTTAGATGCAGCTTTTACCAATTTTAACATTCACAAT
CATATGTACATTCAACCAATTATCAACAGCTTTCAAACACAACGTTGGCA
ATCCTGACTTCTTACCCTTTTTTCCGTTTTTCCCGTACGGGAAAGGGTTC
GATTACGTGCTTACAGATCCACCAAATTATGTGTTCGCCGAGGGAGATGA
AGATTATGGAATATTTGATCATTACCTGAGTAAAGAGCTcccgatttttc
aaaatccaaacaCGCGGTGGATATTTGTTGGAGTCAACGGTTATGTCTCA
TTCACTGAGCCTTGGTACAGCAACGGTGCAGATAAATTCCCTCAGGCTGG
TCCTGGAATTAGTCTTTTCCAAACAGACCTTGTTTTCACGGATGCAAAAG
ATTCACATCTCTCTTTTAAAGAGTACGATGAAGAAGATAAAGACATTATG
GAGCATGCGCGAAATGAATTGGAGGTGTACGCCAATCTAAAAGATTTCGA
TCCTAACCACGTGATTGTTGTCACGTGGCATAAAGCATCAAAGAAAGACA
ACAAAGGAAATGTAACTTTCCAACTAGTACTTGCTTCAGATGGTTTCAAC
ACCTATGCCATCTTGAATTACGAAGATATTACGATTAGTCTCCAGCGAAA
AGATTTCTGCCCTGTAACAATTGGTTGGCAAGAAGACCTCCAACGTTATG
TtgaacatgaaaacatgcaactCACCCAAGCCTTCCCTTATAGACCAATC
AGAATGTCTAAGAAATCAAACATCGGTTTCCCTGGAAAATGGATTTATAA
ACTCTTTGGAACCAAAATTGCAGAAGAAAACAAACCATCGCCAGTGCCAA
CTCGACCAGCAAACATCAAACATCTTCCCGCTGAATGCCCTGGAAACGAT
TTCTGCCAAAATACCAAAAACGTTTTAAATGTATGGCCCGGTTATTCCAC
CTTCTATGTAGTATGTCCACCCGGTGGCGCACCCGTATGTATGCCATGTG
CGGAAGGGACCGCCTTTAGTCCGGAATGCAGGACGTGCGTTCATACAAGT
CAACTTGGACAGCCAAAGGATAAACTTTGTCCACAACCATCGAAGAAGAT
GGAAGATCGAGTGAAACAAACTGCAAGATGCAACCATGCTGATGCATTAC
GTCACTGTACCATGCGTGAGAACCAATTACATGACGGTCAAAAGAAAACA
CAACACACCACAAGCTACCGAAACCATAACGACGTCAATGGAGCGTCATA
TTATCTTTGTGCCGGTGCTGTTGGTAGTTTTTGTATGCCTTGCCCTGCAG
GGACCGTTTTTCAACAGTATGAGCATGATAAGAATAACGGCGCATGCGTA
CATAAAAGCCCAAAGACGCATGCTGAATGGATTTAGATGCAGCTTTTACC
AATTTTAACATTCACAATCATATGTACATTCAACCAATTATCAACAGCTT
TCAAACACAACGTTGGCAATCCTGACTTCTTACCCTTTTTTCCGTTTTTC
CCGTACGGGAAAGGGTTCGATTACGTGCTTACAGATCCACCAAATTATGT
GTTCGCCGAGGGAGATGAAGATTATGGAATATTTGATCATTACCTGAGTA
AAGAGCTcccgatttttcaaaatccaaacaCGCGGTGGATATTTGTTGGA
GTCAACGGTTATGTCTCATTCACTGAGCCTTGGTACAGCAACGGTGCAGA
TAAATTCCCTCAGGCTGGTCCTGGAATTAGTCTTTTCCAAACAGACCTTG
TTTTCACGGATGCAAAAGATTCACATCTCTCTTTTAAAGAGTACGATGAA
GAAGATAAAGACATTATGGAGCATGCGCGAAATGAATTGGAGGTGTACGC
CAATCTAAAAGATTTCGATCCTAACCACGTGATTGTTGTCACGTGGCATA
AAGCATCAAAGAAAGACAACAAAGGAAATGTAACTTTCCAACTAGTACTT
GCTTCAGATGGTTTCAACACCTATGCCATCTTGAATTACGAAGATATTAC
GATTAGTCTCCAGCGAAAAGATTTCTGCCCTGTAACAATTGGTTGGCAAG
AAGACCTCCAACGTTATGTtgaacatgaaaacatgcaactCACCCAAGCC
TTCCCTTATAGACCAATCAGAATGTCTAAGAAATCAAACATCGGTTTCCC
TGGAAAATGGATTTATAAACTCTTTGGAACCAAAATTGCAGAAGAAAACA
AACCATCGCCAGTGCCAACTCGACCAGCAAACATCAAACATCTTCCCGCT
GAATGCCCTGGAAACGATTTCTGCCAAAATACCAAAAACGTTTTAAATGT
ATGGCCCGGTTATTCCACCTTCTATGTAGTATGTCCACCCGGTGGCGCAC
CCGTATGTATGCCATGTGCGGAAGGGACCGCCTTTAGTCCGGAATGCAGG
ACGTGCGTTCATACAAGTCAACTTGGACAGCCAAAGGATAAACTTTGTCC
ACAACCATCGAAGAAGATGGAAGATCGAGTGAAACAAACTGCAAGATGCA
ACCATGCTGATGCATTACGTCACTGTACCATGCGTGAGAACCAATTACAT
GACGGTCAAAAGAAAACACAACACACCACAAGCTACCGAAACCATAACGA
CGTCAATGGAGCGTCATATTATCTTTGTGCCGGTGCTGTTGGTAGTTTTT
GTATGCCTTGCCCTGCAGGGACCGTTTTTCAACAGTATGAGCATGATAAG
AATAACGGCGCATGCGTACATAAAAGCCCAAAGACGCATGCTGAATGGAT
TTAGATGCAGCTTTTACCAATTTTAACATTCACAATCATATGTACATTCA
ACCAATTATCAACAGCTTTCAAACACAACGTTGGCAATCCTGACTTCTTA
CCCTTTTTTCCGTTTTTCCCGTACGGGAAAGGGTTCGATTACGTGCTTAC
AGATCCACCAAATTATGTGTTCGCCGAGGGAGATGAAGATTATGGAATAT
TTGATCATTACCTGAGTAAAGAGCTcccgatttttcaaaatccaaacaCG
CGGTGGATATTTGTTGGAGTCAACGGTTATGTCTCATTCACTGAGCCTTG
GTACAGCAACGGTGCAGATAAATTCCCTCAGGCTGGTCCTGGAATTAGTC
TTTTCCAAACAGACCTTGTTTTCACGGATGCAAAAGATTCACATCTCTCT
TTTAAAGAGTACGATGAAGAAGATAAAGACATTATGGAGCATGCGCGAAA
TGAATTGGAGGTGTACGCCAATCTAAAAGATTTCGATCCTAACCACGTGA
TTGTTGTCACGTGGCATAAAGCATCAAAGAAAGACAACAAAGGAAATGTA
ACTTTCCAACTAGTACTTGCTTCAGATGGTTTCAACACCTATGCCATCTT
GAATTACGAAGATATTACGATTAGTCTCCAGCGAAAAGATTTCTGCCCTG
TAACAATTGGTTGGCAAGAAGACCTCCAACGTTATGTtgaacatgaaaac
atgcaactCACCCAAGCCTTCCCTTATAGACCAATCAGAATGTCTAAGAA
ATCAAACATCGGTTTCCCTGGAAAATGGATTTATAAACTCTTTGGAACCA
AAATTGCAGAAGAAAACAAACCATCGCCAGTGCCAACTCGACCAGCAAAC
ATCAAACATCTTCCCGCTGAATGCCCTGGAAACGATTTCTGCCAAAATAC
CAAAAACGTTTTAAATGTATGGCCCGGTTATTCCACCTTCTATGTAGTAT
GTCCACCCGGTGGCGCACCCGTATGTATGCCATGTGCGGAAGGGACCGCC
TTTAGTCCGGAATGCAGGACGTGCGTTCATACAAGTCAACTTGGACAGCC
AAAGGATAAACTTTGTCCACAACCATCGAAGAAGATGGAAGATCGAGTGA
AACAAACTGCAAGATGCAACCATGCTGATGCATTACGTCACTGTACCATG
CGTGAGAACCAATTACATGACGGTCAAAAGAAAACACAACACACCACAAG
CTACCGAAACCATAACGACGTCAATGGAGCGTCATATTATCTTTGTGCCG
GTGCTGTTGGTAGTTTTTGTATGCCTTGCCCTGCAGGGACCGTTTTTCAA
CAGTATGAGCATGATAAGAATAACGGCGCATGCGTACATAAAAGCCCAAA
GACGCATGCTGAATGGATTTAGATGCAGCTTTTACCAATTTTAACATTCA
CAATCATATGTACATTCAACCAATTATCAACAGCTTTCAAACACAACGTT
GGCAATCCTGACTTCTTACCCTTTTTTCCGTTTTTCCCGTACGGGAAAGG
GTTCGATTACGTGCTTACAGATCCACCAAATTATGTGTTCGCCGAGGGAG
ATGAAGATTATGGAATATTTGATCATTACCTGAGTAAAGAGCTcccgatt
tttcaaaatccaaacaCGCGGTGGATATTTGTTGGAGTCAACGGTTATGT
CTCATTCACTGAGCCTTGGTACAGCAACGGTGCAGATAAATTCCCTCAGG
CTGGTCCTGGAATTAGTCTTTTCCAAACAGACCTTGTTTTCACGGATGCA
AAAGATTCACATCTCTCTTTTAAAGAGTACGATGAAGAAGATAAAGACAT
TATGGAGCATGCGCGAAATGAATTGGAGGTGTACGCCAATCTAAAAGATT
TCGATCCTAACCACGTGATTGTTGTCACGTGGCATAAAGCATCAAAGAAA
GACAACAAAGGAAATGTAACTTTCCAACTAGTACTTGCTTCAGATGGTTT
CAACACCTATGCCATCTTGAATTACGAAGATATTACGATTAGTCTCCAGC
GAAAAGATTTCTGCCCTGTAACAATTGGTTGGCAAGAAGACCTCCAACGT
TATGTtgaacatgaaaacatgcaactCACCCAAGCCTTCCCTTATAGACC
AATCAGAATGTCTAAGAAATCAAACATCGGTTTCCCTGGAAAATGGATTT
ATAAACTCTTTGGAACCAAAATTGCAGAAGAAAACAAACCATCGCCAGTG
CCAACTCGACCAGCAAACATCAAACATCTTCCCGCTGAATGCCCTGGAAA
CGATTTCTGCCAAAATACCAAAAACGTTTTAAATGTATGGCCCGGTTATT
CCACCTTCTATGTAGTATGTCCACCCGGTGGCGCACCCGTATGTATGCCA
TGTGCGGAAGGGACCGCCTTTAGTCCGGAATGCAGGACGTGCGTTCATAC
AAGTCAACTTGGACAGCCAAAGGATAAACTTTGTCCACAACCATCGAAGA
AGATGGAAGATCGAGTGAAACAAACTGCAAGATGCAACCATGCTGATGCA
TTACGTCACTGTACCATGCGTGAGAACCAATTACATGACGGTCAAAAGAA
AACACAACACACCACAAGCTACCGAAACCATAACGACGTCAATGGAGCGT
CATATTATCTTTGTGCCGGTGCTGTTGGTAGTTTTTGTATGCCTTGCCCT
GCAGGGACCGTTTTTCAACAGTATGAGCATGATAAGAATAACGGCGCATG
CGTACATAAAAGCCCAAAGACGCATGCTGAATGGATTTAGATGCAGCTTT
TACCAATTTTAACATTCACAATCATATGTACATTCAACCAATTATCAACA
GCTTTCAAACACAACGTTGGCAATCCTGACTTCTTACCCTTTTTTCCGTT
TTTCCCGTACGGGAAAGGGTTCGATTACGTGCTTACAGATCCACCAAATT
ATGTGTTCGCCGAGGGAGATGAAGATTATGGAATATTTGATCATTACCTG
AGTAAAGAGCTcccgatttttcaaaatccaaacaCGCGGTGGATATTTGT
TGGAGTCAACGGTTATGTCTCATTCACTGAGCCTTGGTACAGCAACGGTG
CAGATAAATTCCCTCAGGCTGGTCCTGGAATTAGTCTTTTCCAAACAGAC
CTTGTTTTCACGGATGCAAAAGATTCACATCTCTCTTTTAAAGAGTACGA
TGAAGAAGATAAAGACATTATGGAGCATGCGCGAAATGAATTGGAGGTGT
ACGCCAATCTAAAAGATTTCGATCCTAACCACGTGATTGTTGTCACGTGG
CATAAAGCATCAAAGAAAGACAACAAAGGAAATGTAACTTTCCAACTAGT
ACTTGCTTCAGATGGTTTCAACACCTATGCCATCTTGAATTACGAAGATA
TTACGATTAGTCTCCAGCGAAAAGATTTCTGCCCTGTAACAATTGGTTGG
CAAGAAGACCTCCAACGTTATGTtgaacatgaaaacatgcaactCACCCA
AGCCTTCCCTTATAGACCAATCAGAATGTCTAAGAAATCAAACATCGGTT
TCCCTGGAAAATGGATTTATAAACTCTTTGGAACCAAAATTGCAGAAGAA
AACAAACCATCGCCAGTGCCAACTCGACCAGCAAACATCAAACATCTTCC
CGCTGAATGCCCTGGAAACGATTTCTGCCAAAATACCAAAAACGTTTTAA
ATGTATGGCCCGGTTATTCCACCTTCTATGTAGTATGTCCACCCGGTGGC
GCACCCGTATGTATGCCATGTGCGGAAGGGACCGCCTTTAGTCCGGAATG
CAGGACGTGCGTTCATACAAGTCAACTTGGACAGCCAAAGGATAAACTTT
GTCCACAACCATCGAAGAAGATGGAAGATCGAGTGAAACAAACTGCAAGA
TGCAACCATGCTGATGCATTACGTCACTGTACCATGCGTGAGAACCAATT
ACATGACGGTCAAAAGAAAACACAACACACCACAAGCTACCGAAACCATA
ACGACGTCAATGGAGCGTCATATTATCTTTGTGCCGGTGCTGTTGGTAGT
TTTTGTATGCCTTGCCCTGCAGGGACCGTTTTTCAACAGTATGAGCATGA
TAAGAATAACGGCGCATGCGTACATAAAAGCCCAAAGACGCATGCTGAAT
GGATTTAGATGCAGCTTTTACCAATTTTAACATTCACAATCATATGTACA
TTCAACCAATTATCAACAGCTTTCAAACACAACGTTGGCAATCCTGACTT
CTTACCCTTTTTTCCGTTTTTCCCGTACGGGAAAGGGTTCGATTACGTGC
TTACAGATCCACCAAATTATGTGTTCGCCGAGGGAGATGAAGATTATGGA
ATATTTGATCATTACCTGAGTAAAGAGCTcccgatttttcaaaatccaaa
caCGCGGTGGATATTTGTTGGAGTCAACGGTTATGTCTCATTCACTGAGC
CTTGGTACAGCAACGGTGCAGATAAATTCCCTCAGGCTGGTCCTGGAATT
AGTCTTTTCCAAACAGACCTTGTTTTCACGGATGCAAAAGATTCACATCT
CTCTTTTAAAGAGTACGATGAAGAAGATAAAGACATTATGGAGCATGCGC
GAAATGAATTGGAGGTGTACGCCAATCTAAAAGATTTCGATCCTAACCAC
GTGATTGTTGTCACGTGGCATAAAGCATCAAAGAAAGACAACAAAGGAAA
TGTAACTTTCCAACTAGTACTTGCTTCAGATGGTTTCAACACCTATGCCA
TCTTGAATTACGAAGATATTACGATTAGTCTCCAGCGAAAAGATTTCTGC
CCTGTAACAATTGGTTGGCAAGAAGACCTCCAACGTTATGTtgaacatga
aaacatgcaactCACCCAAGCCTTCCCTTATAGACCAATCAGAATGTCTA
AGAAATCAAACATCGGTTTCCCTGGAAAATGGATTTATAAACTCTTTGGA
ACCAAAATTGCAGAAGAAAACAAACCATCGCCAGTGCCAACTCGACCAGC
AAACATCAAACATCTTCCCGCTGAATGCCCTGGAAACGATTTCTGCCAAA
ATACCAAAAACGTTTTAAATGTATGGCCCGGTTATTCCACCTTCTATGTA
GTATGTCCACCCGGTGGCGCACCCGTATGTATGCCATGTGCGGAAGGGAC
CGCCTTTAGTCCGGAATGCAGGACGTGCGTTCATACAAGTCAACTTGGAC
AGCCAAAGGATAAACTTTGTCCACAACCATCGAAGAAGATGGAAGATCGA
GTGAAACAAACTGCAAGATGCAACCATGCTGATGCATTACGTCACTGTAC
CATGCGTGAGAACCAATTACATGACGGTCAAAAGAAAACACAACACACCA
CAAGCTACCGAAACCATAACGACGTCAATGGAGCGTCATATTATCTTTGT
GCCGGTGCTGTTGGTAGTTTTTGTATGCCTTGCCCTGCAGGGACCGTTTT
TCAACAGTATGAGCATGATAAGAATAACGGCGCATGCGTACATAAAAGCC
CAAAGACGCATGCTGAATGGATTTAGATGCAGCTTTTACCAATTTTAACA
TTCACAATCATATGTACATTCAACCAATTATCAACAGCTTTCAAACACAA
CGTTGGCAATCCTGACTTCTTACCCTTTTTTCCGTTTTTCCCGTACGGGA
AAGGGTTCGATTACGTGCTTACAGATCCACCAAATTATGTGTTCGCCGAG
GGAGATGAAGATTATGGAATATTTGATCATTACCTGAGTAAAGAGCTccc
gatttttcaaaatccaaacaCGCGGTGGATATTTGTTGGAGTCAACGGTT
ATGTCTCATTCACTGAGCCTTGGTACAGCAACGGTGCAGATAAATTCCCT
CAGGCTGGTCCTGGAATTAGTCTTTTCCAAACAGACCTTGTTTTCACGGA
TGCAAAAGATTCACATCTCTCTTTTAAAGAGTACGATGAAGAAGATAAAG
ACATTATGGAGCATGCGCGAAATGAATTGGAGGTGTACGCCAATCTAAAA
GATTTCGATCCTAACCACGTGATTGTTGTCACGTGGCATAAAGCATCAAA
GAAAGACAACAAAGGAAATGTAACTTTCCAACTAGTACTTGCTTCAGATG
GTTTCAACACCTATGCCATCTTGAATTACGAAGATATTACGATTAGTCTC
CAGCGAAAAGATTTCTGCCCTGTAACAATTGGTTGGCAAGAAGACCTCCA
ACGTTATGTtgaacatgaaaacatgcaactCACCCAAGCCTTCCCTTATA
GACCAATCAGAATGTCTAAGAAATCAAACATCGGTTTCCCTGGAAAATGG
ATTTATAAACTCTTTGGAACCAAAATTGCAGAAGAAAACAAACCATCGCC
AGTGCCAACTCGACCAGCAAACATCAAACATCTTCCCGCTGAATGCCCTG
GAAACGATTTCTGCCAAAATACCAAAAACGTTTTAAATGTATGGCCCGGT
TATTCCACCTTCTATGTAGTATGTCCACCCGGTGGCGCACCCGTATGTAT
GCCATGTGCGGAAGGGACCGCCTTTAGTCCGGAATGCAGGACGTGCGTTC
ATACAAGTCAACTTGGACAGCCAAAGGATAAACTTTGTCCACAACCATCG
AAGAAGATGGAAGATCGAGTGAAACAAACTGCAAGATGCAACCATGCTGA
TGCATTACGTCACTGTACCATGCGTGAGAACCAATTACATGACGGTCAAA
AGAAAACACAACACACCACAAGCTACCGAAACCATAACGACGTCAATGGA
GCGTCATATTATCTTTGTGCCGGTGCTGTTGGTAGTTTTTGTATGCCTTG
CCCTGCAGGGACCGTTTTTCAACAGTATGAGCATGATAAGAATAACGGCG
CATGCGTACATAAAAGCCCAAAGACGCATGCTGAATGGATTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043955XLOC_043955Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070647-exon-scaffold_57-1491911889:654352..654873TCONS_00070647-exon-scaffold_57-1491911889:654352..654873Clytia hemisphaericaexon
TCONS_00070647-exon-scaffold_57-1510915933:654352..654873TCONS_00070647-exon-scaffold_57-1510915933:654352..654873Clytia hemisphaericaexon
TCONS_00070647-exon-scaffold_57-1575043694:654352..654873TCONS_00070647-exon-scaffold_57-1575043694:654352..654873Clytia hemisphaericaexon
TCONS_00070647-exon-scaffold_57-1491911889:656346..656414TCONS_00070647-exon-scaffold_57-1491911889:656346..656414Clytia hemisphaericaexon
TCONS_00070647-exon-scaffold_57-1510915933:656346..656414TCONS_00070647-exon-scaffold_57-1510915933:656346..656414Clytia hemisphaericaexon
TCONS_00070647-exon-scaffold_57-1575043694:656346..656414TCONS_00070647-exon-scaffold_57-1575043694:656346..656414Clytia hemisphaericaexon
TCONS_00070647-exon-scaffold_57-1491911889:656518..656733TCONS_00070647-exon-scaffold_57-1491911889:656518..656733Clytia hemisphaericaexon
TCONS_00070647-exon-scaffold_57-1510915933:656518..656733TCONS_00070647-exon-scaffold_57-1510915933:656518..656733Clytia hemisphaericaexon
TCONS_00070647-exon-scaffold_57-1575043694:656518..656733TCONS_00070647-exon-scaffold_57-1575043694:656518..656733Clytia hemisphaericaexon
TCONS_00070647-exon-scaffold_57-1491911889:657184..657291TCONS_00070647-exon-scaffold_57-1491911889:657184..657291Clytia hemisphaericaexon
TCONS_00070647-exon-scaffold_57-1510915933:657184..657291TCONS_00070647-exon-scaffold_57-1510915933:657184..657291Clytia hemisphaericaexon
TCONS_00070647-exon-scaffold_57-1575043694:657184..657291TCONS_00070647-exon-scaffold_57-1575043694:657184..657291Clytia hemisphaericaexon
TCONS_00070647-exon-scaffold_57-1491911889:657881..658025TCONS_00070647-exon-scaffold_57-1491911889:657881..658025Clytia hemisphaericaexon
TCONS_00070647-exon-scaffold_57-1510915933:657881..658025TCONS_00070647-exon-scaffold_57-1510915933:657881..658025Clytia hemisphaericaexon
TCONS_00070647-exon-scaffold_57-1575043694:657881..658025TCONS_00070647-exon-scaffold_57-1575043694:657881..658025Clytia hemisphaericaexon
TCONS_00070647-exon-scaffold_57-1491911889:658667..658927TCONS_00070647-exon-scaffold_57-1491911889:658667..658927Clytia hemisphaericaexon
TCONS_00070647-exon-scaffold_57-1510915933:658667..658927TCONS_00070647-exon-scaffold_57-1510915933:658667..658927Clytia hemisphaericaexon
TCONS_00070647-exon-scaffold_57-1575043694:658667..658927TCONS_00070647-exon-scaffold_57-1575043694:658667..658927Clytia hemisphaericaexon
TCONS_00070647-exon-scaffold_57-1491911889:659164..659232TCONS_00070647-exon-scaffold_57-1491911889:659164..659232Clytia hemisphaericaexon
TCONS_00070647-exon-scaffold_57-1510915933:659164..659232TCONS_00070647-exon-scaffold_57-1510915933:659164..659232Clytia hemisphaericaexon
TCONS_00070647-exon-scaffold_57-1575043694:659164..659232TCONS_00070647-exon-scaffold_57-1575043694:659164..659232Clytia hemisphaericaexon
TCONS_00070647-exon-scaffold_57-1491911889:659644..660096TCONS_00070647-exon-scaffold_57-1491911889:659644..660096Clytia hemisphaericaexon
TCONS_00070647-exon-scaffold_57-1510915933:659644..660096TCONS_00070647-exon-scaffold_57-1510915933:659644..660096Clytia hemisphaericaexon
TCONS_00070647-exon-scaffold_57-1575043694:659644..660096TCONS_00070647-exon-scaffold_57-1575043694:659644..660096Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070647-proteinTCONS_00070647-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_57supercontigscaffold_57:654352..660096 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.12903	0.868086	0.516257	0.360769	2.40097	2.08238	1.64695	1.46346	1.31734	3.17284	2.44171	1.59062	72.0417	40.8046	104.426	59.1152	6.32412	20.0308	2.05417	3.16393	0.860696	0.460775	0.721949	0.633723	1.37537	1.31071	1.39927	2.38299	3.92811	3.3883
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003886NIDO_dom
IPR002557Chitin-bd_dom
Vocabulary: Biological Process
TermDefinition
GO:0007160cell-matrix adhesion
GO:0006030chitin metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007160 cell-matrix adhesion
biological_process GO:0006030 chitin metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0008061 chitin binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070647 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top