TCONS_00070626 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070626
Unique NameTCONS_00070626
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2582

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070626 ID=TCONS_00070626|Name=TCONS_00070626|organism=Clytia hemisphaerica|type=transcript|length=2582bp
AACAGCTCAAGGATGGAATTATCTTTTGtAAAATGATCAATTTGTCAGCT
CCAAAAACTATTGATGAAAGAGCCATCAACAAGGGACGATTGAATGCATT
CTTAATTCAAGAAAACAATTTGTTGGTCATCAATTCTGCTCAAGCTATCG
GTTGCAGTGTTGTCAACGTTCATGCTGAGGATATCATCAAAGGGAAACAA
CACTTGATACTTGGTCTACTATGGCAAATTATTAGGATTGGTTTATTTGC
AAACATCACACTCCAAGCCAATCCAAACATTGCTGCCCTTCTTGAGGATG
GAGAATCAATTGAAGACTTGCTCAAATTGTCACCTGAAGAACTCTTGTTG
AGATGGGTCAATTATCATTTGAGGAAATCTGGTTCCAACAAACGAATCAA
CAATTTCTCTGGTGACATCAAGGACTCAGAAGCTTATGCCATTCTTTTAA
ATCAAATCTCACCACAAGAATTCGGAGTTGACCGCCCTGAGAGAACCATG
CAGATTGGGGATAGTACCAAAAGAGcagatttgattttaaagaATGCTGA
CAAAATTGGGTGCAGGAAATTCGTCACAGCTAagGACATTGTGGGAGGAA
ATAGTAAGTTGAATCTGGCCTTCGTTGCCAACTTGTTCAACCATTTCCCC
ACCCTCGATCCCAACGACATCGAAGAAGACGTCGAATATGAACCTTATGA
GGAATCACGAGAAGAGAAAACTTATCGTAACTGGATGAACAGTTTGGGCG
TCAACCCCTTTGTTTATCACCTATACAACGATTTGAGTAACGGTCTTGTT
TTATTCCAGCTCTACGAAGACATTCGCAAGGGAACGGTGAATTGGGACAA
AGTCAATAAAGCGCCCTTCAAACTTGCCACGGGTGGTAACATGAAGAAAA
TTGAGAATTGCAATTATGCAGTTCAACTTGGTAAAATAAAGAACAGCTAC
TCGCTTGTTGGAATTGGTGGCGAAGATATTTATAATGGAACACCAACCTT
AGTTCTTGCTTTGATTTGGCAAATGTTACGCGATTACACTACAAGGATGT
TGGCCAGCCTCACCAAACAAGATGGTAGCAAAATTACTGATGGTGCAATC
GTGGACTGGGTTAACAATAAGCTCAACTCTTGCAACAAACGAACCCGTAT
CGCCAACTTCAAGGACCCAACCATTTCCACCAGCCTGGCTGTTATTGATC
TTGTCGATTCTATCAAGCCTGGATCCGTCGATTATAGCCTGGTCACAGAA
GGACATTCTGATGAGGACAAGGAACTTAACGCCCAATACGCTATCTCAAT
GAGCCGAAAGATTGGCGCCAAAACATACGCCCTACCCGAAGATTTGGTTG
AAGTCAAACCGAAAATGGTTTTGACTGTCTTCGCATGTCTGATGACTCGT
GGTTTGCAACCTAACTAAAAAACAATATTGCTGGTTAGTAGTATAGCTTG
TCTAAGCTAATCTTTCTTAAATATCTAGGTAACTTTGTATTCATTTTATA
TAGGATCTAACTATAATTTTCTATCCGGGTATTCTGTTATGACTTTAAGT
AGCAAATCACCTGGAACATATTTACCTTCTTAAACTGGATTAAacttcgc
gtggattaattttcgcaattTTCGAGAGCTTTAGCCGTCTTTcgtgaaaa
atttgaagttcAAATTTTGGTCataatccctaggaaaatgaaagaaattg
ggTACCAAAGGGGCCTATTCGCTaaatttttagatactaaattgGCGATA
TNTGGTACCAAAGGGGCCTATTCGCTAAAATTTTAGATACTAAATTGGCG
ATAAGTCCATGCGAAAATTAACCAACTTAAGGTATATCCATGTTATGCTA
CAAAGTGAATTGGTTATTTGTAAGTCTCATTATCAAAGTGTAGTTACTAA
GACACTTTCGATAGCGCTAGTTAATATAGACTATAATTTATAGCAATTTT
TGCACATTTTccaagttgaattttttttttggctaaGGGCTGTAGataca
ttttttttacattatttaaaaaatttctgaatATAATATTGTAAAGTACG
AATTTTTGGGCACCATTGTATAAAATTAGGGTTTTCTAATGCACCATTTT
TTCTAGCTTATTtatcattttgttgtttttttcatttctcctaGAACTAA
TTAATATTACCCTCGACCCAGTACTCTTTTTGAGCAGTTTGAAGATGAAT
TTTCCCGCTATAGTCATGGAGTTGAGATGTGCTTTTCATTATTTATATgc
cttttataagaacaatttcataggaaaatcaacaaaatgtaagaaCAAAC
TCAGTTCAACTTGGGCCAGCTTAACGTTTTTTGTATAGACAGTCCGTAAA
GAACGTTGAAATAAGAACAGCTGAACAAtaagaagaaaataagaacagct
aGAGACTTGTGtcggttcttataaaaaaagcattcaGTTTATTTcttaaa
tatatttattttatactttgtagagaaaaaaaatcctctTTCAGTTGCAT
TTATATGAAAGATTCTGTTTGccgtattttttttttcgcgatTCATAATT
TTGTCTGCGTGCTTGAGTTGAAAATTCCTTAC
Run BLAST on NCBI

transcript from alignment at scaffold_57:194098..201039+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070626 ID=TCONS_00070626|Name=TCONS_00070626|organism=Clytia hemisphaerica|type=transcript|length=6942bp|location=Sequence derived from alignment at scaffold_57:194098..201039+ (Clytia hemisphaerica)
AACAGCTCAAGGATGGAATTATCTTTTGGTACAATGGTTGCTAgttgttt taaaattaaaaaaatctgttttcagattttttatccTGTACTTTCTTCAA AATATGATAGATTTTTATGATAGCCAAAAGATTTTGAGAACATTTCAAGC AtttaaatttgaacatttttgagACATGACGTTTGACACTCATTTAAAAA TTTACTCTtctcaaactattttttcagtAAAATGATCAATTTGTCAGCTC CAAAAACTATTGATGAAAGAGCCATCAACAAGGGACGATTGAATGCATTC TTAATTCAAGAAAACAATTTGTTGGTCATCAATTCTGCTCAAGCTATCGG TTGCAGTGTTGTCAACGTTCATGCTGAGGATATCATCAAAGGGAAACAAC ACTTGATACTTGGTCTACTATGGCAAATTATTAGGGTAACTTCTTCTTTA CATCTTTTgtactattttgaaaaaaatatttgtaacttCCTGGCACAAAA TTATTTAAGTAATTAGCTTTAATTTTTGAATATGGGAATATAATTTCAGA ACTTCTTCTATATATTACACCCCAATTCGTCAGTGCAACTATGTAGAGCA AATATTGGTAAAAGTGCTGAGTGTTGTGTATGTAATGGCTAATTAAACTT TGTTGGATATTTTAACATAATAGATTGGTTTATTTGCAAACATCACACTC CAAGCCAATCCAAACATTGCTGCCCTTCTTGAGGATGGAGAATCAATTGA AGACTTGCTCAAATTGTCACCTGAAGAACTCTTGTTGAGATGGGTCAATT ATCATTTGAGGAAATCTGGTTCCAACAAACGAATCAACAATTTCTCTGGT GACATCAAGGTTGGTAATTATTTTGCAAGAAGATTTTATGTGATGTGAAT CATGAGCTGATGATGATATTCTTTCTTTGAAACAATTGAATATTACTtct aaaaaaattctgaaatattaTAGATCAGCCTTATTTCGAGTATAAAGTCT GTTTTCCAGTCAGATCCTCTAGAGaacaaattattttgaaaatctctaGA GAATGACTGGAGAAGATTGTTAGGCGTAGGTCACTGCTGAATCTCTatat gggctcttccagaaaatgtccgtacatgggaattggaggatatagtgtcc tgGGGGTAGTGAAAATTCGCAATGTACGAAGagtaaattcttaaaaaatg ttatatcctccatcccccatattcaatttttttctggcagTTTTGAATTT TACATAAATGAAAATTATAAGTATTCTTTTTCTGTGTGTTTAGGACTCAG AAGCTTATGCCATTCTTTTAAATCAAATCTCACCACAAGAATTCGGAGTT GACCGCCCTGAGAGAACCATGCAGGTACTTTATTTACATGCTCTTTATAA GCTGACCTTTTCCCCAATTGatttagatagatagatagagtcgattttct agcccagtaatctaggacttttagacagtctttcgattgttttcacgggg tccacggctagccggctcggctatctttgaactgaacggaacattggaag gagcggggattcgaaccgcaAATTCCTGGTTTGGGATGCAAATGCCGCTC CTcatttctttttcgaattttaggttatattttacttttgatgtttttga ttgCCTTTAATTGTTGTATCCATTACGTGACATTGGCATTATATCATTTT CTCTACTGTACTGTGTGAGTCGTTTATTAACTTTTAAATTTACACTTGTT TGACTGATTATAACTTTACAACCTTTTTAGATTGGGGATAGTACCAAAAG AGcagatttgattttaaagaATGCTGACAAAATTGGGTGCAGGAAATTCG TCACAGCTAaggtaaaattattttcataagcAACCGAATTGCTAAAGCCC TCTAAACCAAATTCCGTTGTAACGATAGGGTTTGATTTGTGCACAAAGAT AAAGTTTTTACATACTTTTTTTAGATCCTTTCCCTTCAGGACATAGTGGG GAAAATAACACGTTAAATTTTATATCATATGATTCCTGTAACTTGAGCCC AAATCCCTTTGTAACGTTTAAAGGTTTGGTTGGTCAACaaagtttttaca ttttttttacatcTTCTCCTTTCACAGGACATTGTGGGAGGAAATAGTAA GTTGAATCTGGCCTTCGTTGCCAACTTGTTCAACCATTTCCCCACCCTCG ATCCCAACGACATCGAAGAAGACGTCGAATATGAACCTTATGAGGAATCA CGAGAAGAGAAAAGTGAgtatcatttgaaatatttttatccctTTTACTT TGGCTGCCTCTCTTAaaggcgcagtagtgtagtggtcatcgctcttgact tccgtgctggatatcagggttcgattcccactcggtgctgcgattcactt ggcaagtgaatgtaccttgtcccgggtcaacccataccatgtgaggggaa agggtaccatcactctgatacaagagtatggggaaATATGCTGGACATTG CATTTGGTGTGGCGATGGTACTCATATGTTCAGGTTCTCCCGTACTGTCC GAGTATCATCATCAATACAGCACAGCTCGGATGTGcaatgtctggtaagc gctgtgatttccctatctaggGGTAGGAAACTATCCCGGGAAAGGGCCCG GTCCGATGATATCGGAAGGTCAGCTTCTCTCTCTTCTCTCTTCTGCCTCT CTGAAAATCGCCAAGTTCTTTTGAGGAAAATCACTAacaaaaagtgccct tttttgCTCCCAGCAGACACCTATTCCTTTCTAGAATATGAATTTTATCG CAAAAATCTTATCTGAAATATTGGgctttttccagaaatagtctggaGCC CCTTTGTCGAGGAGGTGTAACGTcaagggtggtctggaaaataagtTCAC CTCTTCAAAAAAAAGCATTTCTGCCCTTGAGGGCAATATAGAGGGTACAA ATAGCCCCGCCCAACTAGCCCAACCCAGCTAGCCTAACTTTTACCTTGTT CTTTTAGCTTATCGTAACTGGATGAACAGTTTGGGCGTCAACCCCTTTGT TTATCACCTATACAACGATTTGAGTAACGGTCTTGTTTTATTCCAGGTTA GTTGTGTTGTCAttgtttttcaaactttttgtatgaatgcttttaaaatt tattcGACACAGTTTTTATCTCTAAACAATACTTTGGCCTCCCTTGTGAA GGTTAACATGTAGATTTTTGTATGCAAGTTTTAACAATTGTTCTCCTTTC GATATGGAGATACTATATCCTGAGAAAAGAGTTTATGGTTCGTTATAAAC ACCGGGCATTGTTTGTTGAGCTACATTACTATCAAGAACAGAgcaaatca acttttatttagcATAAGCTATTCACAAGAGGAAAAGGTTACAGTTGGTG AGCTGAGGGTAAAAATGGGATCAACGAGCTTCATCACAGAGGTCTCCGTa caggaattttttttaatatgcagacaatgcgcacagagtgtactacgaag cgataaacatGAGATACACTCTGTTACAGAGTAGGTCAGATCAGGCTCAT TATATTGACTATTCTGTCATACGAGTAAAGTTAATTATTTCATAGCTCTA CGAAGACATTCGCAAGGGAACGGTGAATTGGGACAAAGTCAATAAAGCGC CCTTCAAACTTGCCACGGGTGGTAACATGAAGAAAATTGAGAATTGCAAT TATGCAGTTCAACTTGGTAAAATAAAGAACAGCTACTCGCTTGTTGGAAT TGGTGGCGAAGATATTTATAATGGAACACCAACCTTAGTTCTTGGTGAGT TTTCCTTCTGTGTAATAATAGGGGTGTTAATTTATGTTTGCTGAGGGATG TGAACCCCCGATATTTATTTCATCCCTCCTCTATCTgttataaattttgt ccaccttttttatagaaaatcCGTATCGAAAAAGTTGTTATAAAAATTTG TGATGGCGCGCCCCTAGAGAAAGCAGTTCttcattttgttaaaaaataca gTGTGGTAGGAATGGTAGGAAATATGTTTAATGGCGGTTTTTAGTATACT TATTTCCATTTTACAGCTTTGATTTGGCAAATGTTACGCGATTACACTAC AAGGATGTTGGCCAGCCTCACCAAACAAGATGGTAGCAAAATTACTGATG GTGCAATCGTGGACTGGGTTAACAATAAGGTTTGGTGATGTTTTTTCCAG AAAACGTCGTTAACTTAACATAACCATTAAGGGCTATTTACACTGCACAA AATAttgtcagcccccccccccccccccactgtTATACAAAGTAAAGATT TTTGGTTGCGCCTAATCTATATTAATTCCCCCCCCCACTTTTAGCTCACT ATTGACTTTCAACCGTTGGAAAAGTTaggatttttttgcaaattgcAGTG TAGAATTTGGGTCTTAACTTTAGATGACCTGTAAAGTGCACACAAAGCGC GTTTGATTGCGTTGTCAAATAAACTTAGttcaatttcaataaaaattccT ATATTTTGCTGTCATCCTTCTAAATTCCCACATGTAACGCTAGAATGGAC TACCGTCGTTCGAGTGTATTTTAGTTATGTTTTCTCTACCTCTCTCCTCA GCTCAACTCTTGCAACAAACGAACCCGTATCGCCAACTTCAAGGACCCAA CCATTTCCACCAGCCTGGCTGTTATTGATCTTGTCGATTCTATCAAGCCT GGATCCGTCGATTATAGCCTGGTCACAGAAGGACATTCTGATGAGGTAAA CAAATgacctgtttttattttttttcttatacaaGACAATAATGACACAT TTCTAAAAAAGTTTTCAGCGTATAGTGCCagtgatattcatgatatttta CACAgcttatcgtggcttggatcacgagatttacgtaaGGTTAAGTTTCG AGTGATTCTTCTTCGATCATCAGGCAAGATGATGAATGTTTTTCTCCACT TTTCTCCACTGCTCAGGAAATCTCACAAAATACTCTATTATTTGGTACGG CAATGAAATAAGAGATCGTACGAGCGTGTACGTTAggccaaaattcttaa aattcaaTGATCAATGTTTGATTTCCATCAAGAAAGAGGTTAACTCGAAC ACAATTAATTtgtatgtttacatttttttgtttactcagcagTTTATCTC TTTCTtgtttggttgaaaaattatcaattggGATGTGCGCTCCTGTTTGT GAACGGCACGATCAAAATACATTTTGTAGCACTGTCTTAATTTccgaatt tatttttttgccgTCTAAAACCTCTCTGTAGGTGTTTATCTTACGGAAAT GAAGTATTTATTATGACTAATGAGAAACAAGAACTATTTTACTATATGTG CTGTATAAAGTCgggttattcatgatattcatgacgtaatgttttctacg gaaagaccccagtttttgccagtagtgggaACTTTAAACTAAACTAAAGT TGTATAAAATATGCCAccactggcaaaaaccggggtctttccgcaGAAAA CATTAcctacatcatgaatatcatgaataaaaggCAGTTAAGTAGTTGCT TAAATTTTTTGTCTCTTTAGCTTGCTACTTTTAGATTTTGTCCTATTTAT CAACACATTCTCTATATTTTTCAAGGACAAGGAACTTAACGCCCAATACG CTATCTCAATGAGCCGAAAGATTGGCGCCAAAACATACGCCCTACCCGAA GATTTGGTTGAAGTCAAACCGAAAATGGTTTTGACTGTCTTCGCATGTCT GATGACTCGTGGTTTGCAACCTAACTAAAAAACAATATTGCTGGTTAGTA GTATAGCTTGTCTAAGCTAATCTTTCTTAAATATCTAGGTAACTTTGTAT TCATTTTATATAGGATCTAACTATAATTTTCTATCCGGGTATTCTGTTAT GACTTTAAGTAGCAAATCACCTGGAACATATTTACCTTCTTAAACTGGAT TAAacttcgcgtggattaattttcgcaattTTCGAGAGCTTTAGCCGTCT TTcgtgaaaaatttgaagttcAAATTTTGGTCataatccctaggaaaatg aaagaaattgggTACCAAAGGGGCCTATTCGCTaaatttttagatactaa attgGCGATATNTGGTACCAAAGGGGCCTATTCGCTAAAATTTTAGATAC TAAATTGGCGATAAGTCCATGCGAAAATTAACCAACTTAAGGTATATCCA TGTTATGCTACAAAGTGAATTGGTTATTTGTAAGTCTCATTATCAAAGTG TAGTTACTAAGACACTTTCGATAGCGCTAGTTAATATAGACTATAATTTA TAGCAATTTTTGCACATTTTccaagttgaattttttttttggctaaGGGC TGTAGatacattttttttacattatttaaaaaatttctgaatATAATATT GTAAAGTACGAATTTTTGGGCACCATTGTATAAAATTAGGGTTTTCTAAT GCACCATTTTTTCTAGCTTATTtatcattttgttgtttttttcatttctc ctaGAACTAATTAATATTACCCTCGACCCAGTACTCTTTTTGAGCAGTTT GAAGATGAATTTTCCCGCTATAGTCATGGAGTTGAGATGTGCTTTTCATT ATTTATATgccttttataagaacaatttcataggaaaatcaacaaaatgt aagaaCAAACTCAGTTCAACTTGGGCCAGCTTAACGTTTTTTGTATAGAC AGTCCGTAAAGAACGTTGAAATAAGAACAGCTGAACAAtaagaagaaaat aagaacagctaGAGACTTGTGtcggttcttataaaaaaagcattcaGTTT ATTTcttaaatatatttattttatactttgtagagaaaaaaaatcctctT TCAGTTGCATTTATATGAAAGATTCTGTTTGccgtattttttttttcgcg atTCATAATTTTGTCTGCGTGCTTGAGTTGAAAATTCCTTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043944XLOC_043944Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070626-exon-scaffold_57-1491911889:194098..194125TCONS_00070626-exon-scaffold_57-1491911889:194098..194125Clytia hemisphaericaexon
TCONS_00070626-exon-scaffold_57-1510915933:194098..194125TCONS_00070626-exon-scaffold_57-1510915933:194098..194125Clytia hemisphaericaexon
TCONS_00070626-exon-scaffold_57-1575043694:194098..194125TCONS_00070626-exon-scaffold_57-1575043694:194098..194125Clytia hemisphaericaexon
TCONS_00070626-exon-scaffold_57-1491911889:194325..194532TCONS_00070626-exon-scaffold_57-1491911889:194325..194532Clytia hemisphaericaexon
TCONS_00070626-exon-scaffold_57-1510915933:194325..194532TCONS_00070626-exon-scaffold_57-1510915933:194325..194532Clytia hemisphaericaexon
TCONS_00070626-exon-scaffold_57-1575043694:194325..194532TCONS_00070626-exon-scaffold_57-1575043694:194325..194532Clytia hemisphaericaexon
TCONS_00070626-exon-scaffold_57-1491911889:194771..194956TCONS_00070626-exon-scaffold_57-1491911889:194771..194956Clytia hemisphaericaexon
TCONS_00070626-exon-scaffold_57-1510915933:194771..194956TCONS_00070626-exon-scaffold_57-1510915933:194771..194956Clytia hemisphaericaexon
TCONS_00070626-exon-scaffold_57-1575043694:194771..194956TCONS_00070626-exon-scaffold_57-1575043694:194771..194956Clytia hemisphaericaexon
TCONS_00070626-exon-scaffold_57-1491911889:195391..195471TCONS_00070626-exon-scaffold_57-1491911889:195391..195471Clytia hemisphaericaexon
TCONS_00070626-exon-scaffold_57-1510915933:195391..195471TCONS_00070626-exon-scaffold_57-1510915933:195391..195471Clytia hemisphaericaexon
TCONS_00070626-exon-scaffold_57-1575043694:195391..195471TCONS_00070626-exon-scaffold_57-1575043694:195391..195471Clytia hemisphaericaexon
TCONS_00070626-exon-scaffold_57-1491911889:195878..195958TCONS_00070626-exon-scaffold_57-1491911889:195878..195958Clytia hemisphaericaexon
TCONS_00070626-exon-scaffold_57-1510915933:195878..195958TCONS_00070626-exon-scaffold_57-1510915933:195878..195958Clytia hemisphaericaexon
TCONS_00070626-exon-scaffold_57-1575043694:195878..195958TCONS_00070626-exon-scaffold_57-1575043694:195878..195958Clytia hemisphaericaexon
TCONS_00070626-exon-scaffold_57-1491911889:196225..196360TCONS_00070626-exon-scaffold_57-1491911889:196225..196360Clytia hemisphaericaexon
TCONS_00070626-exon-scaffold_57-1510915933:196225..196360TCONS_00070626-exon-scaffold_57-1510915933:196225..196360Clytia hemisphaericaexon
TCONS_00070626-exon-scaffold_57-1575043694:196225..196360TCONS_00070626-exon-scaffold_57-1575043694:196225..196360Clytia hemisphaericaexon
TCONS_00070626-exon-scaffold_57-1491911889:197105..197193TCONS_00070626-exon-scaffold_57-1491911889:197105..197193Clytia hemisphaericaexon
TCONS_00070626-exon-scaffold_57-1510915933:197105..197193TCONS_00070626-exon-scaffold_57-1510915933:197105..197193Clytia hemisphaericaexon
TCONS_00070626-exon-scaffold_57-1575043694:197105..197193TCONS_00070626-exon-scaffold_57-1575043694:197105..197193Clytia hemisphaericaexon
TCONS_00070626-exon-scaffold_57-1491911889:197693..197891TCONS_00070626-exon-scaffold_57-1491911889:197693..197891Clytia hemisphaericaexon
TCONS_00070626-exon-scaffold_57-1510915933:197693..197891TCONS_00070626-exon-scaffold_57-1510915933:197693..197891Clytia hemisphaericaexon
TCONS_00070626-exon-scaffold_57-1575043694:197693..197891TCONS_00070626-exon-scaffold_57-1575043694:197693..197891Clytia hemisphaericaexon
TCONS_00070626-exon-scaffold_57-1491911889:198164..198276TCONS_00070626-exon-scaffold_57-1491911889:198164..198276Clytia hemisphaericaexon
TCONS_00070626-exon-scaffold_57-1510915933:198164..198276TCONS_00070626-exon-scaffold_57-1510915933:198164..198276Clytia hemisphaericaexon
TCONS_00070626-exon-scaffold_57-1575043694:198164..198276TCONS_00070626-exon-scaffold_57-1575043694:198164..198276Clytia hemisphaericaexon
TCONS_00070626-exon-scaffold_57-1491911889:198699..198842TCONS_00070626-exon-scaffold_57-1491911889:198699..198842Clytia hemisphaericaexon
TCONS_00070626-exon-scaffold_57-1510915933:198699..198842TCONS_00070626-exon-scaffold_57-1510915933:198699..198842Clytia hemisphaericaexon
TCONS_00070626-exon-scaffold_57-1575043694:198699..198842TCONS_00070626-exon-scaffold_57-1575043694:198699..198842Clytia hemisphaericaexon
TCONS_00070626-exon-scaffold_57-1491911889:199723..201039TCONS_00070626-exon-scaffold_57-1491911889:199723..201039Clytia hemisphaericaexon
TCONS_00070626-exon-scaffold_57-1510915933:199723..201039TCONS_00070626-exon-scaffold_57-1510915933:199723..201039Clytia hemisphaericaexon
TCONS_00070626-exon-scaffold_57-1575043694:199723..201039TCONS_00070626-exon-scaffold_57-1575043694:199723..201039Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_57supercontigscaffold_57:194098..201039 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.00239321 3.98269e-07 1.48895e-07 0.000307964 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.0020316 0 2.42003 2.46923 0.431738 3.45496 0 0 2.77216 0.223646 4.02957 5.00086
Blast
BLAST of TCONS_00070626 vs. Swiss-Prot (Human)
Match: PLST (Plastin-3 OS=Homo sapiens GN=PLS3 PE=1 SV=4)

HSP 1 Score: 506.908 bits (1304), Expect = 2.639e-168
Identity = 282/472 (59.75%), Postives = 350/472 (74.15%), Query Frame = 3
Query:   12 DGIIFCKMINLSAPKTIDERAINKGRLNAFLIQENNLLVINSAQAIGCSVVNVHAEDIIKGKQHLILGLLWQIIRIGLFANITLQANPNIAALLEDGESIXXXXXXXXXXXXXRWVNYHLRKSGSNKRINNFSGDIKDSEAYAILLNQISP--QEFGVDRPERTMQ---IGDSTKRADLILKNADKIGCRKFVTAKDIVGGNSKLNLAFVANLFNHFPTLDPNDIXXXXXXXXXXXXXXXXXXRNWMNSLGVNPFVYHLYNDLSNGLVLFQLYEDIRKGTVNWDKVNKAPFKLATGGNMKKIENCNYAVQLGKIKNSYSLVGIGGEDIYNGTPTLVLALIWQMLRDYTTRMLASLTKQDGSKITDGAIVDWVNNKLNSCNKRTRIANFKDPTISTSLAVIDLVDSIKPGSVDYSLVTEGH-SDEDKELNAQYAISMSRKIGAKTYALPEDLVEVKPKMVLTVFACLMTRGLQ 1409
            DGI+ CKMINLS P TIDERAINK +L  F+IQEN  L +NSA AIGC VVN+ AED+  GK HL+LGLLWQII+IGLFA+I L  N  +AALL DGE++E+L+KLSPEELLLRW N+HL  SG  K INNFS DIKDS+AY  LLNQI+P  Q+ G  R +  M      D  KRA+ +L+ ADK+GCR+FVT  D+V GN KLNLAFVANLFN +P L   + ++        E+REE+T+RNWMNSLGVNP V HLY DL + LV+ QLYE I K  V+W KVNK P+    G NMKK+ENCNYAV+LGK    +SLVGIGG+D+ +G  TL LAL+WQ++R YT  +L  L   DG K  D  IV+WVN  L+   K T I +FKD TIS+SLAV+DL+D+I+PG ++Y LV  G+ +++DK  NA+YA+SM+R+IGA+ YALPEDLVEVKPKMV+TVFACLM RG++
Sbjct:  162 DGIVLCKMINLSVPDTIDERAINKKKLTPFIIQENLNLALNSASAIGCHVVNIGAEDLRAGKPHLVLGLLWQIIKIGLFADIELSRNEALAALLRDGETLEELMKLSPEELLLRWANFHLENSGWQK-INNFSADIKDSKAYFHLLNQIAPKGQKEGEPRIDINMSGFNETDDLKRAESMLQQADKLGCRQFVTPADVVSGNPKLNLAFVANLFNKYPALTKPENQDIDWTLLEGETREERTFRNWMNSLGVNPHVNHLYADLQDALVILQLYERI-KVPVDWSKVNKPPYP-KLGANMKKLENCNYAVELGKHPAKFSLVGIGGQDLNDGNQTLTLALVWQLMRRYTLNVLEDLG--DGQKANDDIIVNWVNRTLSEAGKSTSIQSFKDKTISSSLAVVDLIDAIQPGCINYDLVKSGNLTEDDKHNNAKYAVSMARRIGARVYALPEDLVEVKPKMVMTVFACLMGRGMK 628          
The following BLAST results are available for this feature:
BLAST of TCONS_00070626 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PLST2.639e-16859.75Plastin-3 OS=Homo sapiens GN=PLS3 PE=1 SV=4[more]
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