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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070471 ID=TCONS_00070471|Name=TCONS_00070471|organism=Clytia hemisphaerica|type=transcript|length=1188bp
gctgattttttATGTGCTGTGACGTCACCGTTgttctttttcaatttatt
tcatatgagatgattttttataagatacttctcaataattggtcatttga
agtaataaaaatgacgcgttctttagaaaaagtaacaaaattgttttatt
actgtttaacgaccaaccaaatcaaataagagcttgtaaaaactccatct
cgtcccgttTATTTTTCAGAAAGACGACCAAGAGGATCAGGATAAACTTT
TTGAACAAATCAAGCAAGATGGCATCAAAGCTGTGTTCTGTGATGAGTTT
GACTTGGATTACAAAGAAGGTTTGGTGAGAAAGGTTTCCGAGATTGTTGA
ATACCTATGGGTCGTCCCATCAACTCAAGATTTAAGCAATGCAAAGTTGG
AAAAATGGGAAGATGAATTCACCTTTCTCAATCTCGAACAGAACTTTCGT
AATGCACGAGAGATTGTGAGAATGACGAAGTCTGTTAGTGAGGAGAAGCA
ATACAATTATAAGAACGGTATCGTTTTGCCTCCTGAAAACTTCCCTTCCG
GATGTACACCGATACTAGTGGATACTTTCGTGGACGCGATGGTGGAAGCA
CGGAAACGAACCAAAGATGGAATTTTGATCTTAGATGATACTACACCAAA
CCGTTTCGACATTTTTAATCAGGTGAAGGAACCATGGAAGGCATACCACA
ACAAACGAAATGATTTCAAAGAAGAAGAGAACCCATACAAGTATCTACAA
GAGGGAAAGGTTTTGATCACCAACGAAGTAGTATCGTTAGGTTTCGAATG
GACAACACTTATAATATTTGAAGGCAGACTTGCTCCACCGACTTACCACG
AGTGTAACTTTATGATGAGGTGTACCACAAACCTCATCATTGTCAAGAAA
AACAAACCCTCACCCTGATGATTCccttataaatatttttaaaacatgaA
GACACTGGGAACGAATTTACAagacagttttttttaaatgagagaTAATA
CAAGCAGCAGCAATGTATTATATTCACCAGATTCTGCAAACGGACTCGCA
ATAATGAGCCGAGttaattttgtttcatttaGCCACAAGCCATTTTCGAA
GATGGTAGTAGTATTAGTATAGCAGCAGtaataatatttcattttctcat
CGAGTTTATTTtcctcgattttttttcttaatacAAAC Run BLAST on NCBI transcript from alignment at scaffold_56:535835..537022+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070471 ID=TCONS_00070471|Name=TCONS_00070471|organism=Clytia hemisphaerica|type=transcript|length=1188bp|location=Sequence derived from alignment at scaffold_56:535835..537022+ (Clytia hemisphaerica)
gctgattttttATGTGCTGTGACGTCACCGTTgttctttttcaatttatt
tcatatgagatgattttttataagatacttctcaataattggtcatttga
agtaataaaaatgacgcgttctttagaaaaagtaacaaaattgttttatt
actgtttaacgaccaaccaaatcaaataagagcttgtaaaaactccatct
cgtcccgttTATTTTTCAGAAAGACGACCAAGAGGATCAGGATAAACTTT
TTGAACAAATCAAGCAAGATGGCATCAAAGCTGTGTTCTGTGATGAGTTT
GACTTGGATTACAAAGAAGGTTTGGTGAGAAAGGTTTCCGAGATTGTTGA
ATACCTATGGGTCGTCCCATCAACTCAAGATTTAAGCAATGCAAAGTTGG
AAAAATGGGAAGATGAATTCACCTTTCTCAATCTCGAACAGAACTTTCGT
AATGCACGAGAGATTGTGAGAATGACGAAGTCTGTTAGTGAGGAGAAGCA
ATACAATTATAAGAACGGTATCGTTTTGCCTCCTGAAAACTTCCCTTCCG
GATGTACACCGATACTAGTGGATACTTTCGTGGACGCGATGGTGGAAGCA
CGGAAACGAACCAAAGATGGAATTTTGATCTTAGATGATACTACACCAAA
CCGTTTCGACATTTTTAATCAGGTGAAGGAACCATGGAAGGCATACCACA
ACAAACGAAATGATTTCAAAGAAGAAGAGAACCCATACAAGTATCTACAA
GAGGGAAAGGTTTTGATCACCAACGAAGTAGTATCGTTAGGTTTCGAATG
GACAACACTTATAATATTTGAAGGCAGACTTGCTCCACCGACTTACCACG
AGTGTAACTTTATGATGAGGTGTACCACAAACCTCATCATTGTCAAGAAA
AACAAACCCTCACCCTGATGATTCccttataaatatttttaaaacatgaA
GACACTGGGAACGAATTTACAagacagttttttttaaatgagagaTAATA
CAAGCAGCAGCAATGTATTATATTCACCAGATTCTGCAAACGGACTCGCA
ATAATGAGCCGAGttaattttgtttcatttaGCCACAAGCCATTTTCGAA
GATGGTAGTAGTATTAGTATAGCAGCAGtaataatatttcattttctcat
CGAGTTTATTTtcctcgattttttttcttaatacAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070471-exon-scaffold_56-1491911889:535835..537022 | TCONS_00070471-exon-scaffold_56-1491911889:535835..537022 | Clytia hemisphaerica | exon |
| TCONS_00070471-exon-scaffold_56-1510915933:535835..537022 | TCONS_00070471-exon-scaffold_56-1510915933:535835..537022 | Clytia hemisphaerica | exon |
| TCONS_00070471-exon-scaffold_56-1575043694:535835..537022 | TCONS_00070471-exon-scaffold_56-1575043694:535835..537022 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_56 | supercontig | scaffold_56:535835..537022 + |
Blast
The following BLAST results are available for this feature:
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