TCONS_00070399 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070399
Unique NameTCONS_00070399
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2198

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070399 ID=TCONS_00070399|Name=TCONS_00070399|organism=Clytia hemisphaerica|type=transcript|length=2198bp
ttttctctcgcaatcagccatatttacaaaaatcccgaatttcatgattt
ttttacttggcctcgttcaaaatcggtttggtgttgttctagtgctccgt
ttattttaatttttggagagattgcaaGGAATAGTTTGAGGATGCACAAA
GGAAGTTCTCTACAAGGGAGTTCATAACAGAAAATGGGGCAAGGCACATC
TTCAGAGACAGATGCTAAATTGAAAGCATTAGTATCCAAGCTTAGCAAGC
TGGAGATTAAAGATATTGAAGCAGTTTTCATGGAGTTATCTACTACTACT
GATGAAGGACAGTTTGTTATCCAACAACCCTCATGGCTCAATCGTGATAA
ATTTGCTGAAATATTTGGTTTAAATGATCTGATTGTGGAACAGTTATTTC
AAACATTCGACCGTGACAAGAATGGTATTATTGATCTGCAAGAATTTGTT
ACTGGTATGGCATTGTGTTTGCATGGTGGTATCAAAGAAAAATGTCACTT
AttattcaagattttcaatttgAATGGGGATGAAGGGATTAGCCGTGAAG
AGTTATCGACAGTTTTAACCAGTTGTTTGATGTCAGCCAATACCTTGCTT
CAAAGCACATTGAAAACCGAAGGGCTGTCAGCATTTGAGAGTCAGCTAGC
TGATCAAACTGGTGCAGCTGTTATGCTTAATGTTGTGGTCGATAAAATTG
TGAAGGAAGCATTTGACACTTGTGATGTTTCTAACACTGGAAAGCTGGAA
ATTGATGAGTTTGCCAAATGGGTTCATAAAAATCCCAAATTGATGAACAA
TATTTTTGTATTGCAATGTCCTAAGCCAACACCATCACCCATTAAAAgct
cAGAAAGTAGTTTTTCTGTTTTAACAATGGCTGGCCAGGATGAAAACATC
CCTGAGGAAAACTCCAAAACGAAGATTGAGATGGCTAGATCAgTTTCTCA
AATAACAGAAGAGTCGACAAAATCATTACTAGAACTTAGCCAAGAAACCA
ACACACCGACAACTGCTGGTGATCTATTCAAAGAAACAAGCCAACCTTCT
GCTGACGGTGCAGATTTTTTCGACACACTTGGTTCACATAATGAAACACC
TTCTCAAGCACCAGCCGGTCAGTTACCACGTCCAGCTAGTGAATTATTCC
TATCCTCAGGAAATGAAAACTCAAATATAGATGGTTTGCAGCACAGTACA
AGCCATAATGATCTCGCTTCCTTGAAACAACAGCCCGCTATCAGCCATTT
ACAAAACGCAGAGAGTATGCAATCAATAGCTTTATCCAGAGACTCACTTG
CACCGGATTCGCACAATGCATCACAAGAGTTAGGAACCTCAACAGAAAAT
ATCACCTCATTAGTTCCTCAACATCATACTGAGCCAACAATACAACTTCA
CCAAGAAAACCAGCAACAAACACTGCCCCAAGTTGATCCATCCTcatatc
aacaacaacaacaaagccCCACCCAAGCACAACAACAACCACCCATCCAA
CCGCCCCAGACCACCATGCAAACACAATACCAACAGCAACAAAAAACAGA
CCATTCACAAAGCTTTGATAACCCTGCGCTAGCATTGGAGACAGAAGTCA
ACAATGAAGTGTTTCCAGAACAACCAGCCGTTATTCAAAACACTATTTTG
GACAATAGCCAAGTATATAACGACAAATTAGTGGACCCGGCACAAGAACA
ACGGCGTCGTGGATGTTCTTTTTGGCAACCGAGCACTAACACTGAACGTC
TTCTGCAACAATACAAACAAGGTGCTATCCCTGAGATGAATGTTCTTACG
TCTCCATCCGTCTTGGTTGAGAATCTCATGGGTGATCCAGTGAAAGACTT
GGTACGAAAATATTTGGGTGAGCAAGAAGCCAACAAGAGACCAACACTGA
TGGCCAATCAAGTGGAGATGAATGAAAATGGATTGAGAAGATTATTGGCT
GCAGGATGTTGGAGAGCGGCAGTGGACTTTACCACTAAATATCTGACAGC
GCACGGCCAAGGGCTTGTCTCCATGGGACAAAACCAAAGATCCAATTTGA
GCCCTTCCATTTTACAGATTTGGTTCGTACGAATCGCTCTACTGGTCAAG
TTGAGAATGTTCAGTAGTGCAGAAGCAGAGTTGAGCGCCTTCAAAGAATT
TGACGCCCCAGATCTTTATTATCAATATTACCCTGAATTATATCAAGG
Run BLAST on NCBI

transcript from alignment at scaffold_55:152096..160686-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070399 ID=TCONS_00070399|Name=TCONS_00070399|organism=Clytia hemisphaerica|type=transcript|length=8591bp|location=Sequence derived from alignment at scaffold_55:152096..160686- (Clytia hemisphaerica)
TTTTCTCTCGCAATCAGCCATATTTACAAAAATCCCGAATTTCATGATTT
TTTTACTTGGCCTCGTTCAAAATCGGTTTGGTGTTGTTCTAGTGCTCCGT
TTATTTTAATTTTTGGAGAGATTGCAAGGAATAGTTTGAGGATGCACAAA
GGAAGTTCTCTACAAGGTTGTTTTTGGTTATTTTTTTCAAGTTCAAAGAC
GCTCATTCGTGCACTGAGGCCGTCCGTGCACTGGTGACATGACTCTATAC
GAATGATGATGTGAAAAAGATATCGAAAAAATTAAAATTAAATCCCCACC
AAAAATCGCATTTTGGCCAATCGCCAAATAAATCCACGCCAAAATTAATC
CACTTTTAAGGTACAACCTTGAAAGTTTAAAGGAAATCAGAAAAAAAAAC
TAAAATGTTTCTTTTGACCCGAATCCAGAGAAAAACCCTAGCAAAGCATT
GGTATCATCCTGATCAATTTCTATGACCTAGCCCCTGCAAATAAAGCTAT
GAGCACTAATTTTCTCTTTTAAGCAGTTGGTTGTAGTTTGGTACATCGTA
CCATGAGATCAGGTAACTTGCATCAGTGGAGGCTAATATGCATAGCCCTC
AAATGCAAAATGAATGACCTAGCTGGTCATTAAAATACAAAGTTAAATCA
AAACAAAAATGGTAGAGTAGAGCTGCGAGCGAAGCTGGGTAGCTCTTTTG
TTTTGAAATTTTGCTGCTTTGATTGGTCAGTACTGTGAGTGGTCCTAAAT
CTGACAACCCTGCCTAAATCATCCGACCCCACAAATGACTGCTATGATAA
AAAATTCTATGTTTACAAAGATTCCCTCTCCAAGTTGATTAATAAACTAT
ATTGCAAGAACTCTTGAAACAAAACATCTAACAAGATGGACTAAAATGTC
AAGATGTTAATTAATGTGATAAGAAAAGTTTGAGTTGTAAAAATAATTAC
TTCTATTATTCTGAATCCGTTGCTCGTGTTTAAAACCTTTACAATTTTGT
AATAAAAAAATATGTTTTGTATAAGAAGCAATTAATGTTTTGGTTCAATT
GGCTCAGTGTATCAAATCTCTTAGCTTAGTTGACACTTTGGTATCTTCAT
TGCATCACAGTGAAAGGTTTGTTTTTATTTTAGTTTGTATCTTTGAAAGA
CCCATTGGATTTAGGCAGGGTTGTCGGATTTAGGACCACTCACGGTAATT
TGATGGCTATGCAAGTTTCCCTCCACTGATGCAAGTTACTCGACTTCATG
GTACTGGGCACTAGTACCACTCACTTTGAAAGTTTTTTATTCTAAGAAGA
TCGCCTCAAACAAAAATCAAAACAAACATGAAGAGCGTGCTCAAAGTTGT
CTAAGTGTTGGTCAAAAAGGGTTTTCAAAAAAGTTTAATGAAAGTGAGAA
AGTTGAATTAAGAAAAATCGGTCCCCAAATGGTCAGGCTGTCAGAGGGCT
TAAGCTCCGCTCCGCTAAAAATGGCATTTTCGTGAATCACAACTTAAAAG
TGAACAAATTTTCAAAAAGAAATTCAAAAAATTCCATTTTAGGTTAGTTT
GTAATAATTTAATAAAGATCTGGAAAGTTTGAAAAATGTTTAAGTAGAGC
AGGTGTGCCCCCCCCCCCAGTATTCGATCTTCCAGGTCTAGAGCAAATAG
AAAATGGAATAGACTCCTCTCCTCCAGTCTCTGCCAACATACAACGAGAT
GAATAAATTTACCTTACTTACCTTTTCTTCTTCTTCTTCTTTATTTTTGC
AGGGAGTTCATAACAGAAAATGGGGCAAGGCACATCTTCAGAGACAGATG
CTAAATTGAAAGCATTAGTATCCAAGCTTAGCAAGCTGGAGATTAAAGAT
ATTGAAGCAGTTTTCATGTAAATCTACTCTTTTTAATTCTCTTTAGTATT
ACACTCTGATGGTAATTTTTCTGAACGTACAATGATCTTTATCTTTATCA
AACTAATGAACAAGACAGTTTGAAAAAGAAGCAATGGGAAAAAAGTATTT
TATCAGTGTCATAAAAATTGTCTTATACAAGCTTTCACAATAAAAAATTA
GCTGTAGCTGAATTTTGATTCTTAATAGATTCTTCTTCACTCTTTCTCCT
ATAGGGAGTTATCTACTACTACTGATGAAGGACAGTTTGTTATCCAACAA
CCCTCATGGCTCAATCGTGATAAATTTGCTGAAATATTTGGTTTAAATGA
TCTGATTGTGGAACAGTTATTTCAAACATTCGACCGTGACAAGGTTTACC
CTCATCTTTTCATATTAGTTCTTCATTGTGTACTATAGAAGAATTATTTA
TAAGCACTTGTATGTAGAAGAAAATGCATTGATATGATCAGGCATAATGG
TCTAACCAATGTCAATTAATTATCTACCTGGTCAGGAAACTCAACCAAAA
AAGCTGAATTTCATTTTGTTTTGGTCATGTGTGATCAACATCCATGTACA
ATCTGCAGTCGTTTTTCTGGGGGACATCACATTTCCACTCCTCTGCAAGG
ACTTCCCAAATTTTATTTACTTCTCTCTGGGGCAGATTTTTATCATGTGA
TATTGATGAATAAAAAAATATCAGTCTCAAAATTCAAAACAGCCAGACTC
ACATGGTCTTGTTATTTGAATTTTGAGATTGATATTTATTCTATTGACTA
TAATACTGATTTATCATGTTCTAGAATGGTATTATTGATCTGCAAGAATT
TGTTACTGGTATGGCATTGTGTTTGCATGGTGGTATCAAAGAAAAATGTC
ACTTATTATTCAAGATTTTCAATTTGGTATTTTTTTGATACGCTTATATC
ATTATCTAGAATTTAGGCACAAAAGTGTTTATGGAATCTATGTCTTTCGG
TATTGACGAGGCTAACCTTGATGTTTCCTTTCTTCATCTGTCATCTGTGT
TTCTTATGTCTGATTTGATTTGGAAACTATATTTCTAAAGACAATATCAA
AGAAAAAGAGAGTGATACTGTTTGCATTAGGTTTTGGTTTATGTATCAGC
ATAATGTGAAGTAGTCATACTAACAAGTCTGTTTTTTTCCTCTACTTTAT
AGAATGGGGATGAAGGGATTAGCCGTGAAGAGTTATCGACAGTTTTAACC
AGTTGTTTGATGTCAGCCAATACCTTGCTTCAAAGCACATTGAAAACCGA
AGGGCTGTCAGCATTTGAGAGTCAGCTAGCTGATCAAACTGGTGCAGCTG
TTATGCTTAATGTTGTGGTCGATAAGTGAGTATTATTTTCTCATCCAATA
CACTAAAACTTACCACTAAAAGTCCTATAAAGGTGGTTGGATTCGAATTT
ATCCACATAGCTAATAGACATGAATTACTCTTTATTTGATTTAATGCAAA
GACAAAAAGAAGAACTTTTTCTCCCCAATGTGTGTTTTACATTTTAGAAT
TGTGAAGGAAGCATTTGACACTTGTGATGTTTCTAACACTGGAAAGCTGG
AAATTGATGTAAGAAAACATTTTAACTCGCTGTATTTAATTTATTAGATT
CTGCTAGATTCTGAATCAACTGACGATTTTATTTTTATTTTCATCAACTT
CTCAGTAATGTTTTTTCTCTCAGGAGTTTGCCAAATGGGTTCATAAAAAT
CCCAAATTGATGAACAATATTTTTGTATTGCAATGTCCTAAGCCAACACC
ATCACCCATTAAAAGTAAGAGTTTGTTTGTTTTTTAAACATAGGAATTTG
ATTTTTATTCCCCTTTTGAAATATTGTTGAACAAGTCTTATCTTGCATCC
TAAACTATTGAACTCTAACCAAAGTATTGTACAATAGAGAACTTTTGCAA
GCTAATGATGGATGGGAAGTTCAAAGAATTGAAGTTTTTGATACCAAGAC
TATTATTTTCGTTCAACCTTGACATAACATGAATCGGGAAAGATCTCTTT
ACAATGTAAAGATATGTTTTTTTCTTTTTAGGCTCAGAAAGTAGTTTTTC
TGTTTTAACAATGGCTGGCCAGGATGAAAACATCCCTGAGGAAAACTCCA
AAACGAAGATTGAGATGGCTAGATCAGGTAAAAAACATATTTTCATGTAA
AAATGCCAAGTGAACAGTTGTTAACTTTTGTTACCAGTTCAGCGAGTAAC
AAATCAAAACTATGATTCATAGCTTGCTGACTGCTGATTGCCAATTGTTA
GACCAAGAAGTAAGGGCTTTTTGCTGCATATTTTGACCTTTTTTTTCCAT
CTTCACAATCAAAACTGAGTAAATTTTCCTTATTTTGTACGATGACACCC
CCTTCTCACAGACCCGGTAGGAATTTTTCAGCCAGTGGGTATAAAAATAA
CGGACTGAAACTCGATGGGGATTGATATTCCCATATTGTTAAATATAGAT
TTTATGACTAAGGATTTCACTTCTTTTGTTTTCAAGGAAAAAATAGCATA
GCATTTTGCAGTGAGGATTGGTTTATTTGATTATTTTCAGTGGGGACAAA
AATTGGAGGATAATTTTCCACCGGGGACGATATTTTGGACAATTTTTCCA
GTGGGAAAACCTTGGTCCCAGTGGGTCTGTGAGAAGGGGGTGTACGATGG
TATGTACAAGTTTTCGCATCTTTATTATTTCCAGTTTCTCAAATAACAGA
AGAGTCGACAAAATCATTACTAGAACTTAGCCAAGAAACCAACACACCGA
CAACTGCTGGTGATCTATTCAAAGAAACAAGCCAACCTTCTGCTGACGGT
GCAGATTTTTTCGACACACTTGGTTCACATAATGAAACACCTTCTCAAGC
ACCAGCCGGTCAGTTACCACGTCCAGCTAGTGAATTATTCCTATCCTCAG
GAAATGAAAACTCAAATATAGATGGTTTGCAGCACAGTACAAGCCATAAT
GATCTCGCTTCCTTGAAACAACAGCCCGCTATCAGCCATTTACAAAACGC
AGAGAGTATGCAATCAATAGCTTTATCCAGAGACTCACTTGCACCGGATT
CGCACAATGCATCACAAGAGTTAGGAACCTCAACAGAAAATATCACCTCA
TTAGTTCCTCAACATCATACTGAGCCAACAATACAACTTCACCAAGAAAA
CCAGCAACAAACACTGCCCCAAGTTGATCCATCCTCATATCAACAACAAC
AACAAAGCCCCACCCAAGCACAACAACAACCACCCATCCAACCGCCCCAG
ACCACCATGCAAACACAATACCAACAGCAACAAAAAACAGACCATTCACA
AAGCTTTGATAACCCTGCGCTAGCATTGGAGACAGAAGTCAACAATGAAG
TGTTTCCAGAACAACCAGCCGTTATTCAAAACACTATTTTGGACAATGTA
TGATAATTCTATTCATTCCTTTTTTTTGGACCTACCCCGGTGGGGTGGAG
GTCCTATAAATTAACCTGTGTTCGTTCGTCCGTCCGTCCGTCCGTTTGTC
TGTTACCAACTTTTCTCAGGATTGAATCATAGGAATCTTTTGATTATTGG
TACAAAGGTGCAAAATGGTGGTGGCCAAAATGTGACGGAGCCTGATTTTC
GAGAAAAAAAATTTTTGGGTAAAATTTGGGCCAAAAAACGGCTAAAAAAC
GGTTTTTTTGGACTTTATGAAAAATTGGATCATTAATTTTTTCTGATTTT
TTGCATGAAAGTAGGGTACCATCATAGGTAAAAGATGGCTCAAGCAGATT
TTTGCAAAAAGATTTTGTTTTTCTATAAGAATCACTATTAATAAGCATAC
ATCAATGTTCTTAGTCCAATTACTCAATTTTTTTATGAGATAGATGTTTT
TTTTGCTCATAATGGCTTACTTTTGAAGAATATGTGTTTTTAGACATGAA
TTTTGGTTGCTTGGCGTGTTTTTATAGAGAAACTGGATAAATTCGATATT
TTTTTATAAGCACATTATCAATTACTTAGGTATTAGCTTTTCTCAAGATT
GGCTCTTTCATTCCTAATGATTTTTTGCACAATGATGCATAACTATAAAC
CCTCGAATGTGACGGAGCCCGATTTTCGAAAAACAATGTTTTTGGGCAAA
TTTGGGCCAAAAAAAAGCTAAAAANNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTTCGAAAAATA
ATGTTTTTGGGCAAATTTGGGCTAAAAAACGGCTAAAAAACGGGTTTTTT
GGACTTTGTGAAATATTGGATCATTGTTTCTTTCAGATTATTTTGCATGA
AAGTAGGTAAAAGATGGCTCAAGCAGATTTTTGTGAAAAAAGAATTTTTC
AACTCAAAAAAAACGCATCTTTATCTATAAGATAAGAATCACTATTAATA
AGCATACATCAATGTTCTTAGCCAAATCACTATTTGTGTTCTGAATGATT
GTTTAGCGGTCATGCTCACATAGAGATATCAATTATATATGTGTGAAATG
CATAACCAGGTAGGTCCATAAAAGTATCACTTGTTATATTTTGGCTCTAC
ATTTTAACCTTGGCGGATAAGCTTTTCATTCAGAATAGTAATTTTAAATT
CGCCACTGTAAACCCGCCGGGGGGTATTCAAATAAAATGGGTGTCGTATA
TGCGAACAACAATAAAACATCAAGTTAGTCTCTGACAGGCTCCTAAAAGT
ATGAAGTACAAAAAAATTGACTTACCGTATTACTTCGGATCAACGCCCCC
TTCTTTTAAACGCCCCCTTCGAATGAACGCCTTCTCTAGGGGAGGGGCGT
TTATTAGAAATTTGGGACTTTAATACTTCAGTACCAGCGTTGATTGGGTT
TGAAAAGGAAGATTTTAGTCATTTCTTGTAGCCAGAGCAGTTTTCGATGC
AATTTTAGTCGTTGAAACAAAGAAATTTTGCACTAAAATCCTGATAAAGA
ACTAAAACAAAGGGTATACTTGCTCTAAATATTCGACTTTAGACTAAAAT
AATTCAATAAACGCCCCCTTCTTTTAAACGCCCTCTCGAATAAACGCCCC
TCCAAAAATCGAAAAAATTAAATAAACGCCCCGGACGTTTATTCGAAGTA
ATACGGTATTCAAAGGGTCATTAAATCTCGTTATTCAAAAAAAATTCTGA
CTGAAGTTTGGAAAATAGTCCCAGGGTTGTAAAAACGTACTACAAACCTG
GTACCCTCCGGGCTTCAAACTAATTTTCACTTTTACTCCTAGAGCCAAGT
ATATAACGACAAATTAGTGGACCCGGCACAAGAACAACGGCGTCGTGGAT
GTTCTTTTTGGCAACCGAGCACTAACACTGAACGTCTTCTGCAACAATAC
AAACAAGGTGCTATCCCTGAGATGAATGTTCTTACGTCTCCATCCGTCTT
GGTTGAGAATCTCATGGTATGATCACTTACTCTCTTACAGTTTCTATTTC
CAGAGTTTATTCACTGAGAATTCAGCCTGATTTTAACCCCAACTTGGGTG
ATTTGGTTTCTTTGTAGTTGAGTAAGAAGTAAGATGATAAGGAAAAATTA
CAATTGAGCCTGTCTTAATCCCAACTATCCATTACCATGCGTTAAAAAAA
CCTTGGAATTACAATTAGATACTGAAGTTGAGCATACAAGTGGGTTTTAG
TACGTTAGTGTTTTTATAGTACTGGCAACAGAAAATCAATGTGTTCTTTC
TACCGCTTTCTTACAGGGTGATCCAGTGAAAGACTTGGTACGAAAATATT
TGGGTGAGCAAGAAGCCAACAAGAGACCAACACTGATGGCCAATCAAGTG
GAGATGAATGAAAATGGATTGAGAAGATTATTGGTAAGTTTCTTAGGTTT
GTTTTGTAACAGTAGGGCTGTGCTCTTCCTCGCGATAGAATTATTTTCTA
CTTTATTTATAAAGGAGATTTCGAATTAAAGAAAGAGCATATGAATTATA
TCAGTACGATTGAAATTAAAAGTTATACCTCGAGAGTTAAGTTATGAGTT
ACACCTAAACTTTTTTAAGTTTTACCTCGTAAACTTTCTGAGGCTTTTGG
AGCAGATGGGAACTTTCTTTCGGAAAAATCTTTCTTTCTTGTCTTTACAG
GCTGCAGGATGTTGGAGAGCGGCAGTGGACTTTACCACTAAATATCTGAC
AGCGCACGGCCAAGGGCTTGTCTCCATGGGACAAAACCAAAGATCCAATT
TGAGCCCTTCCATTTTACAGGTAAAGTGCCTTTTAATAGCATACCGCAGT
GATTTTAAAAATAGACATCAAAATTACTGTTTGTCCGAGTTTTTAATCCC
ATCATCTTTTGCATTAATTGCTTTTGCAAGTCAATTAAACTTATTGACAA
TACAAAAGTAATAACTTGCACGCATTACGAATCAAGATGAAAAGAATTGT
GCGATTGAATTTCTGTCAAATGTTAAAAGTAATAATTATGACGTTTGCAT
AGCAGTGTGCTATTGAAACTATGGCATCAAACTCCTTATTTGGCACCTTA
TGAAACTGTTATGCACAAAATGAATTACTTTTTGCTAAAGTTCAGACCGT
TTCTTTTTAGATTTGGTTCGTACGAATCGCTCTACTGGTCAAGTTGAGAA
TGTTCAGTAGTGCAGAAGCAGAGTTGAGCGCCTTCAAAGAATTTGACGCC
CCAGATCTTTATTATCAATATTACCCTGAATTATATCAAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043843XLOC_043843Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070399-exon-scaffold_55-1575043694:160521..160686TCONS_00070399-exon-scaffold_55-1575043694:160521..160686Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1575043694:158820..158934TCONS_00070399-exon-scaffold_55-1575043694:158820..158934Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1575043694:158444..158582TCONS_00070399-exon-scaffold_55-1575043694:158444..158582Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1575043694:157911..158012TCONS_00070399-exon-scaffold_55-1575043694:157911..158012Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1575043694:157462..157634TCONS_00070399-exon-scaffold_55-1575043694:157462..157634Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1575043694:157229..157289TCONS_00070399-exon-scaffold_55-1575043694:157229..157289Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1575043694:157023..157113TCONS_00070399-exon-scaffold_55-1575043694:157023..157113Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1575043694:156660..156755TCONS_00070399-exon-scaffold_55-1575043694:156660..156755Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1575043694:155390..156102TCONS_00070399-exon-scaffold_55-1575043694:155390..156102Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1575043694:153371..153544TCONS_00070399-exon-scaffold_55-1575043694:153371..153544Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1575043694:152954..153070TCONS_00070399-exon-scaffold_55-1575043694:152954..153070Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1575043694:152567..152686TCONS_00070399-exon-scaffold_55-1575043694:152567..152686Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1575043694:152096..152226TCONS_00070399-exon-scaffold_55-1575043694:152096..152226Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1510915933:160521..160686TCONS_00070399-exon-scaffold_55-1510915933:160521..160686Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1510915933:158820..158934TCONS_00070399-exon-scaffold_55-1510915933:158820..158934Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1510915933:158444..158582TCONS_00070399-exon-scaffold_55-1510915933:158444..158582Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1510915933:157911..158012TCONS_00070399-exon-scaffold_55-1510915933:157911..158012Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1510915933:157462..157634TCONS_00070399-exon-scaffold_55-1510915933:157462..157634Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1510915933:157229..157289TCONS_00070399-exon-scaffold_55-1510915933:157229..157289Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1510915933:157023..157113TCONS_00070399-exon-scaffold_55-1510915933:157023..157113Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1510915933:156660..156755TCONS_00070399-exon-scaffold_55-1510915933:156660..156755Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1510915933:155390..156102TCONS_00070399-exon-scaffold_55-1510915933:155390..156102Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1510915933:153371..153544TCONS_00070399-exon-scaffold_55-1510915933:153371..153544Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1510915933:152954..153070TCONS_00070399-exon-scaffold_55-1510915933:152954..153070Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1510915933:152567..152686TCONS_00070399-exon-scaffold_55-1510915933:152567..152686Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1510915933:152096..152226TCONS_00070399-exon-scaffold_55-1510915933:152096..152226Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1491911889:160521..160686TCONS_00070399-exon-scaffold_55-1491911889:160521..160686Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1491911889:158820..158934TCONS_00070399-exon-scaffold_55-1491911889:158820..158934Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1491911889:158444..158582TCONS_00070399-exon-scaffold_55-1491911889:158444..158582Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1491911889:157911..158012TCONS_00070399-exon-scaffold_55-1491911889:157911..158012Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1491911889:157462..157634TCONS_00070399-exon-scaffold_55-1491911889:157462..157634Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1491911889:157229..157289TCONS_00070399-exon-scaffold_55-1491911889:157229..157289Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1491911889:157023..157113TCONS_00070399-exon-scaffold_55-1491911889:157023..157113Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1491911889:156660..156755TCONS_00070399-exon-scaffold_55-1491911889:156660..156755Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1491911889:155390..156102TCONS_00070399-exon-scaffold_55-1491911889:155390..156102Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1491911889:153371..153544TCONS_00070399-exon-scaffold_55-1491911889:153371..153544Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1491911889:152954..153070TCONS_00070399-exon-scaffold_55-1491911889:152954..153070Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1491911889:152567..152686TCONS_00070399-exon-scaffold_55-1491911889:152567..152686Clytia hemisphaericaexon
TCONS_00070399-exon-scaffold_55-1491911889:152096..152226TCONS_00070399-exon-scaffold_55-1491911889:152096..152226Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_55supercontigscaffold_55:152096..160686 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.33759	5.5669	2.43111	1.88442	10.8553	7.11142	9.14052	9.49471	4.68086	5.70954	4.8875	6.29592	4.70514	4.19207	3.60941	5.32559	2.92016	5.6395	2.34868	3.55823	4.44069	3.65519	1.10496	2.64064	7.79225	5.32779	1.95526	3.03494	4.63464	5.43205
Blast
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BLAST of TCONS_00070399 vs. Swiss-Prot (Human)
Match: TPC12 (Trafficking protein particle complex subunit 12 OS=Homo sapiens GN=TRAPPC12 PE=1 SV=3)

HSP 1 Score: 132.109 bits (331), Expect = 8.859e-32
Identity = 69/161 (42.86%), Postives = 96/161 (59.63%), Query Frame = 1 
Query: 1723 WQPSTNTERLLQ----QYKQGAIPEMNVLTSPSVLVENLMGDPVKDLVRKYLGEQEANKRPTLMANQVEMNENGLRRLLAAGCWRAAVDFTTKYLTAHGQGLVSMGQNQRSNLSPSILQIWFVRIALLVKLRMFSSAEAELSAFKEFDAPDLYYQYYPELY 2193
            W P   T  +L+    Q +     +   LT P +  +N+ GD VKDL+ ++LGE+ A KR  L A+ VE +  GL++L++   WRAAVD   + LTAHGQG    G    ++ +   LQ+WFVR+ALLVKL +F +AE E   F   D PDLYY+YYP +Y
Sbjct:  310 WLPGEATRGVLRAVATQQRGAVFVDKENLTMPGLRFDNIQGDAVKDLMLRFLGEKAAAKRQVLNADSVEQSFVGLKQLISCRNWRAAVDLCGRLLTAHGQGYGKSG--LLTSHTTDSLQLWFVRLALLVKLGLFQNAEMEFEPFGNLDQPDLYYEYYPHVY 468
The following BLAST results are available for this feature:
BLAST of TCONS_00070399 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TPC128.859e-3242.86Trafficking protein particle complex subunit 12 OS... [more]
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