TCONS_00070181 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070181
Unique NameTCONS_00070181
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length323

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070181 ID=TCONS_00070181|Name=TCONS_00070181|organism=Clytia hemisphaerica|type=transcript|length=323bp
AAGTCCAGTTTGGCCTAATACttcatgaaaaattgatcaaTGTTTCTCAA
ATTTATACAGGAGCTGTACTGAAGTATGCTGAGTCAAATTCCAAAAGAAG
TTTCTTCTACATAAGTCTGTGTCAGAAATGTAAAATCAAAGTAATAGCCT
GTACAATCATGAACATTGGCCGTCTCCAGCGGTGTATCATTTTGGGTCAT
AACTCCTTCAAAAATGGAGCAATCTGTCTCAAATCTCTACAGGAGCTGTA
ATGAAGTATGCTCAATCGAAATCCAGTTGAGTTTTCCTCTGAATAAAATC
GTATCCATGGTGTAAAATCAAAG
Run BLAST on NCBI

transcript from alignment at scaffold_514:127870..128192

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070181 ID=TCONS_00070181|Name=TCONS_00070181|organism=Clytia hemisphaerica|type=transcript|length=323bp|location=Sequence derived from alignment at scaffold_514:127870..128192 (Clytia hemisphaerica)
CTTTGATTTTACACCATGGATACGATTTTATTCAGAGGAAAACTCAACTG
GATTTCGATTGAGCATACTTCATTACAGCTCCTGTAGAGATTTGAGACAG
ATTGCTCCATTTTTGAAGGAGTTATGACCCAAAATGATACACCGCTGGAG
ACGGCCAATGTTCATGATTGTACAGGCTATTACTTTGATTTTACATTTCT
GACACAGACTTATGTAGAAGAAACTTCTTTTGGAATTTGACTCAGCATAC
TTCAGTACAGCTCCTGTATAAATTTGAGAAACAttgatcaatttttcatg
aaGTATTAGGCCAAACTGGACTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043708XLOC_043708Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070181-exon-scaffold_514-1491911889:127870..128192TCONS_00070181-exon-scaffold_514-1491911889:127870..128192Clytia hemisphaericaexon
TCONS_00070181-exon-scaffold_514-1510915933:127870..128192TCONS_00070181-exon-scaffold_514-1510915933:127870..128192Clytia hemisphaericaexon
TCONS_00070181-exon-scaffold_514-1575043694:127870..128192TCONS_00070181-exon-scaffold_514-1575043694:127870..128192Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_514supercontigscaffold_514:127870..128192 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.06901	1.09999	0.352337	1.10505	0	0	0	0	4.17969	7.35592	3.7577	6.38061	1.278	0	0.75874	1.08259	1.15975	0.298088	2.05288	0.406553	0.902608	1.00316	1.07039	0.747321	0	0	0	0.910757	0	0.351896
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070181 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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