|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070178 ID=TCONS_00070178|Name=TCONS_00070178|organism=Clytia hemisphaerica|type=transcript|length=4367bp CTACCATTTTGTATTCGACAAGTTTCGAATAAATTATGCATAATTATGCA GATGTAATTTATTACTGACGTCATTAAACTTTGTTATGTTTCTAAGGAAA CCCGTATTCGCTATTGTTCTCCTTGATAAGGAAACTCTGTGATTGGTCGA TTTTTAGCAAAGTAACTGAAGGaacaaatattgaaaagaagccTTCGTAT GAATCGGTTGTCATCCAGAGAGAAAGGTGTTTGTTGTGGAAAAATAAATC AAGTTTCTAAGTACAGGATACGAGATTCTTACTCTGAGAAGTACTTCATA GAACAGATGGAACGTACGTTTTATTATGTTAACAGCTACCAGGTCTAATT TGTTTTTTATGTCGAATGATCCTTTAATGACTGGTGCCAAAGATACGATT CACCACCATTCAGACAGCATGAGAGGTCACGGCGAAGTCCTGCCTCCATT GAAAGCATCTACGAAGGGTTCCATGACCAGATTGAATCAAGACTCGATCG GACATTCACTACCTCACTTGGGTTCTGTTCAAGTTCAACAACTTTACGAT GAAGATGGTACTGCGAACAAAGGTAAATCAGAAAAAAGACCCTTACCAAC AGTTTCAAATAATATCAACAATAACAGCGGCAGTGTCACtaataacaaca ataacaaTACAAGTAATCACAGGGATACAAGTTCAGCAGATCGACAGTCA AGCATGTCAAACGACTCATCAAGGAGTAAAGGGCAACCTTTAACTCCAGA GAGAGCAATGCAGCTGTACATGCACAAGCTATCTTCATTTGAACATCATG AAGTCTTTAATTTCCCTCAAGTTTACTTTGTTGGACCCAATGCAAAGAAG AGACAGGGTGCAGTTGGAGGAGCAAATAACAATGGATATGATGATGATCA AGGATCCTACATGTTGGTCCCTCATGATCATATTCAATATAGATATGAGG TTTTGAAAGTAATCGGAAAAGGTAGTTTTGGTTCTGTAATCAAGGCTTTT GACCACAAAACTCAATCCCAAGTTGCGCTGAAAATTATTCGTAATGAGAA ACGTTTTCACCGGCAAGCTGCTGAAGAAATTAGAATCTTAGAACATTTAC GTAAACAAGACAAGGAAAATAACTTTAATACCATACATATGTTGGAGCAC TTCACCTTTCGTAATCACACTTGTATCACATTTGAGTTATTAAGCATCAA TCTCTATGAGCTGATAAAGAAGAATAAGTTTCAGGGCTTTTCTTTGCAAC TTGTGCGAAAATTTGCACATTCTATGCTTCAATGTTTGGAAGCTCTGCAT CGTAACCGAATTATCCATTGTGATTTGAAACCAGAGAATGTTTTGCTAAA ACAACAGGGTCGAAGTGGTATAAAGGTTATTGACTTTGGGTCTAGTTGTT ATGAACACCAGCGCATTTACACTTATATCCAGTCTCGTTTTTATCGTGCT CCAGAAGTTGTTCTTGGTGCAAAGTATGGTATGGAGATTGATATGTGGAG TTTTGGTTGTATCTTAGCAGAACTTTTAACAGGTTATCCATTGTTCCCTG GTGAAGACGAAAGTGATCAATTAGCTTGTGTCATTGAATTACTTGGAATG CCACCAGAAAAGCTATTGACAGCTTCAAAACGTGCTAAAAACTTTATCAG TTCTAAAGGATACCCTAGATACTGTAGTGTTAATACCATGCCTGATGGAA GCACAGTGCTATATGGGGGAAGGTCAAAATCTGGAAAAAACAGAGGACCA CCTTCTTCAAAAGACTTTATTACAGCTTTGAAAGGATGCGATGATCCCTT ATTTATTGACTTTCTTAAAAAGTGTCTTGAGTGGGATCCCTCCCAACGAA TGAAACCAGCTCAAGCACTCAGACATCCATGGTTACGAAGGAGACTACCA AGGGCTCCTGTTGATCCTAACGCTGTTACAAATCACCATATTAGTGAGAA AAATAAGCACAACAGACAGAATTCTGCAACAATAACTGTTAATAAATTAC CGCCAACACATCCCCCATCATCTAAACATCGCAGGAGAACAGCCGAAAAC ATTTCAATTAATGATCAAAATGCAGATTTGAATCCAAGAactattttacc aaaaattgtTGGGAGATGAGGGGATATTAATGGCTTTGAAATGCCGTAAg agatttaaatttttaacttgGCAAATATGATATTTTACAGATACCTATAT ATATTTATGCTTGAACAACTCACATACATactttaaattttcagttttat aatttttcagctTATTACTCATCTGGTAGATTTTGCTTGTTCTTTCTTAA AGCTTTTTCTAAAAGACTTCTCTCGGCATTTAGATAAAAAGCAATTATGC ATGATGAATGAGATTACAAAATAATAGTGGTAGGAGAGGTGATTATGCAA TCATTTTAATAAGGAAAATAATATTGTTTCTTGCTGTTTCGAAAGCAAAT GTAAATGTCTGACTTTGGGGTGATTTCAGAATTACCCAGAtttgtttaaa cttttttcaagattttcaagattttttgattcAAATCTTCAGATTTTGCA ACGATTTGAATAAATGCTTGTTGCATTATataaagatttatcaaaaagAA TAGCTTATTCAACTTTCATAAATCTTTAATATGCTGCTACTTAAATCTAA TGCATTCATTCTGTAATAAATCACATTTTTAAAGAAGTTCAGGTATTCAT TTGTCTTATGACATCCAGTAGTTATGAAGCTCAAAGTCCAATCTAGTGAA TTTTCTTTTGAGACTTTCTGTGAAATGAAAGCAGGTGTAAGCTGAATACA ATGTAATACAACTAGAtagattttgagttttttttattttcctctatTCT CAAGAAATTAATCTCATTCAGCTATGCTGATTGTTCTTACTTCCGAAGGT CTTTTGAATTAATACCTTGGAAAATTggggtttttgaaaaaattgtacaC ACAGCTTTTAAATAAGGTCTCTTTAAATATTTACTGGTCTACATTTTTAT CATAGTTTCTGTTTTTTATCATCCTTCTTAATTTTTATGGATTTTACCCC TCTTCATCcttctgggggtgttttttccttttcattttctacattcattt tctatatcaaaaaaGGAAGAGATATAAAGGAATTAGTCTCTCTGTAAGAT AATCAATGTTTTGGAAAGAagagttttctttgttttgtgcGCCAAACATC Tgctacaaaaataaaacttcaacatggaaaaaaaacttattttttccaat TCAGGTACCAtattaaaatataaagttttcttttgacCCCCAAcatcttt tattttctttttcaaagaacatttttcttttcaaattaataattaagcaa aagaactttttaaaattgatctTCTTCAAAGCAAAATGAGTATTTTACCC TTCGAGTTTGTTATTTTATTGGTTTTTCTCATTTGTCTGGTTCCATAACC TTTCACCAAATTCAGACCTCAGTGTgtattataacaattttttcatCAAC CCTGGGAagtatttttagaatttgtttaaTATTGGATAAATTTTGGGCCC GCATAAatatctttataagaaaactttCATGAAATTCTGTTTGCATGTGC TTGAATTcgtatttgaaagttttcttataaaaaagaaagtaatATTTCAT GTCATACTATTTTTTATTTGGAAGTATATATTGTAACATTTTATAGAACT TCAAGTTTGCCTTTTTCAAAAAGGGGGCTTTTAACACATTTCCAAAAGCT ATATTCTTTCTCTATTTAAAGAAAACAGATCAATAATCAAAGGTATTATT TTGACAGAGCGCTAGATATTGACAATGATTAATAGATTGAACTGTACTTA TGACATTAATCTCTTGTCGTTAAGGTCAGCTTATTATTGTAATGAAATGT TCAAATTGACCTCTAAATGCTCTAGAATTAGTAAATTTCAACAATAATAA TCTCTTGTTTTTGGAATGTGTTTAACcccttgtaatttttttctttcctc ctAATTTCTCAACAAtttcaaaactgttttttattaCTGTACATTGAtga gctttgaaaatttttctcattttacacATTAAAAGTTGTTTCTCACAAAT TGAGAGAAGGGGAAAATATGTTATGTGTCTGCTTATGTAAAAGTGTCTCA ACCTGCAATTTGtcagactttttttaaataagttaACAAAAGGGTTGAAA TAATCTctaagacttttttatttcaatcaatGAAAGCTTTTTTTAAGTCA TAAATAGACTTCTTAATTATTTTAGAAGTTTTAATGTATATATactatat tattatattatagtGAATGCAAGGCAAAAAGATAACATGTAAATTAGTTT TTTGCAAGAGATATGGA Run BLAST on NCBI protein sequence of TCONS_00070178-protein >TCONS_00070178-protein ID=TCONS_00070178-protein|Name=TCONS_00070178-protein|organism=Clytia hemisphaerica|type=polypeptide|length=597bp
MLTATRSNLFFMSNDPLMTGAKDTIHHHSDSMRGHGEVLPPLKASTKGSM TRLNQDSIGHSLPHLGSVQVQQLYDEDGTANKGKSEKRPLPTVSNNINNN SGSVTNNNNNNTSNHRDTSSADRQSSMSNDSSRSKGQPLTPERAMQLYMH KLSSFEHHEVFNFPQVYFVGPNAKKRQGAVGGANNNGYDDDQGSYMLVPH DHIQYRYEVLKVIGKGSFGSVIKAFDHKTQSQVALKIIRNEKRFHRQAAE EIRILEHLRKQDKENNFNTIHMLEHFTFRNHTCITFELLSINLYELIKKN KFQGFSLQLVRKFAHSMLQCLEALHRNRIIHCDLKPENVLLKQQGRSGIK VIDFGSSCYEHQRIYTYIQSRFYRAPEVVLGAKYGMEIDMWSFGCILAEL LTGYPLFPGEDESDQLACVIELLGMPPEKLLTASKRAKNFISSKGYPRYC SVNTMPDGSTVLYGGRSKSGKNRGPPSSKDFITALKGCDDPLFIDFLKKC LEWDPSQRMKPAQALRHPWLRRRLPRAPVDPNAVTNHHISEKNKHNRQNS ATITVNKLPPTHPPSSKHRRRTAENISINDQNADLNPRTILPKIVGR Run BLAST on NCBI transcript from alignment at scaffold_514:9866..14232 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070178 ID=TCONS_00070178|Name=TCONS_00070178|organism=Clytia hemisphaerica|type=transcript|length=4367bp|location=Sequence derived from alignment at scaffold_514:9866..14232 (Clytia hemisphaerica) TCCATATCTCTTGCAAAAAACTAATTTACATGTTATCTTTTTGCCTTGCA
TTCactataatataataatatagtATATATACATTAAAACTTCTAAAATA
ATTAAGAAGTCTATTTATGACTTAAAAAAAGCTTTCattgattgaaataa
aaaagtcttagAGATTATTTCAACCCTTTTGTtaacttatttaaaaaaag
tctgaCAAATTGCAGGTTGAGACACTTTTACATAAGCAGACACATAACAT
ATTTTCCCCTTCTCTCAATTTGTGAGAAACAACTTTTAATgtgtaaaatg
agaaaaattttcaaagctcaTCAATGTACAGtaataaaaaacagttttga
aaTTGTTGAGAAATTaggaggaaagaaaaaaattacaagggGTTAAACAC
ATTCCAAAAACAAGAGATTATTATTGTTGAAATTTACTAATTCTAGAGCA
TTTAGAGGTCAATTTGAACATTTCATTACAATAATAAGCTGACCTTAACG
ACAAGAGATTAATGTCATAAGTACAGTTCAATCTATTAATCATTGTCAAT
ATCTAGCGCTCTGTCAAAATAATACCTTTGATTATTGATCTGTTTTCTTT
AAATAGAGAAAGAATATAGCTTTTGGAAATGTGTTAAAAGCCCCCTTTTT
GAAAAAGGCAAACTTGAAGTTCTATAAAATGTTACAATATATACTTCCAA
ATAAAAAATAGTATGACATGAAATattactttcttttttataagaaaact
ttcaaatacgAATTCAAGCACATGCAAACAGAATTTCATGaaagttttct
tataaagatatTTATGCGGGCCCAAAATTTATCCAATAttaaacaaattc
taaaaatactTCCCAGGGTTGatgaaaaaattgttataatacACACTGAG
GTCTGAATTTGGTGAAAGGTTATGGAACCAGACAAATGAGAAAAACCAAT
AAAATAACAAACTCGAAGGGTAAAATACTCATTTTGCTTTGAAGAagatc
aattttaaaaagttcttttgcttaattattaatttgaaaagaaaaatgtt
ctttgaaaaagaaaataaaagatgTTGGGGgtcaaaagaaaactttatat
tttaataTGGTACCTGAattggaaaaaataagttttttttccatgttgaa
gttttatttttgtagcAGATGTTTGGCgcacaaaacaaagaaaactctTC
TTTCCAAAACATTGATTATCTTACAGAGAGACTAATTCCTTTATATCTCT
TCCttttttgatatagaaaatgaatgtagaaaatgaaaaggaaaaaacac
ccccagaagGATGAAGAGGGGTAAAATCCATAAAAATTAAGAAGGATGAT
AAAAAACAGAAACTATGATAAAAATGTAGACCAGTAAATATTTAAAGAGA
CCTTATTTAAAAGCTGTGtgtacaattttttcaaaaaccccAATTTTCCA
AGGTATTAATTCAAAAGACCTTCGGAAGTAAGAACAATCAGCATAGCTGA
ATGAGATTAATTTCTTGAGAatagaggaaaataaaaaaaactcaaaatct
aTCTAGTTGTATTACATTGTATTCAGCTTACACCTGCTTTCATTTCACAG
AAAGTCTCAAAAGAAAATTCACTAGATTGGACTTTGAGCTTCATAACTAC
TGGATGTCATAAGACAAATGAATACCTGAACTTCTTTAAAAATGTGATTT
ATTACAGAATGAATGCATTAGATTTAAGTAGCAGCATATTAAAGATTTAT
GAAAGTTGAATAAGCTATTctttttgataaatctttatATAATGCAACAA
GCATTTATTCAAATCGTTGCAAAATCTGAAGATTTgaatcaaaaaatctt
gaaaatcttgaaaaaagtttaaacaaaTCTGGGTAATTCTGAAATCACCC
CAAAGTCAGACATTTACATTTGCTTTCGAAACAGCAAGAAACAATATTAT
TTTCCTTATTAAAATGATTGCATAATCACCTCTCCTACCACTATTATTTT
GTAATCTCATTCATCATGCATAATTGCTTTTTATCTAAATGCCGAGAGAA
GTCTTTTAGAAAAAGCTTTAAGAAAGAACAAGCAAAATCTACCAGATGAG
TAATAagctgaaaaattataaaactgaaaatttaaagtATGTATGTGAGT
TGTTCAAGCATAAATATATATAGGTATCTGTAAAATATCATATTTGCcaa
gttaaaaatttaaatctcTTACGGCATTTCAAAGCCATTAATATCCCCTC
ATCTCCCAacaatttttggtaaaatagtTCTTGGATTCAAATCTGCATTT
TGATCATTAATTGAAATGTTTTCGGCTGTTCTCCTGCGATGTTTAGATGA
TGGGGGATGTGTTGGCGGTAATTTATTAACAGTTATTGTTGCAGAATTCT
GTCTGTTGTGCTTATTTTTCTCACTAATATGGTGATTTGTAACAGCGTTA
GGATCAACAGGAGCCCTTGGTAGTCTCCTTCGTAACCATGGATGTCTGAG
TGCTTGAGCTGGTTTCATTCGTTGGGAGGGATCCCACTCAAGACACTTTT
TAAGAAAGTCAATAAATAAGGGATCATCGCATCCTTTCAAAGCTGTAATA
AAGTCTTTTGAAGAAGGTGGTCCTCTGTTTTTTCCAGATTTTGACCTTCC
CCCATATAGCACTGTGCTTCCATCAGGCATGGTATTAACACTACAGTATC
TAGGGTATCCTTTAGAACTGATAAAGTTTTTAGCACGTTTTGAAGCTGTC
AATAGCTTTTCTGGTGGCATTCCAAGTAATTCAATGACACAAGCTAATTG
ATCACTTTCGTCTTCACCAGGGAACAATGGATAACCTGTTAAAAGTTCTG
CTAAGATACAACCAAAACTCCACATATCAATCTCCATACCATACTTTGCA
CCAAGAACAACTTCTGGAGCACGATAAAAACGAGACTGGATATAAGTGTA
AATGCGCTGGTGTTCATAACAACTAGACCCAAAGTCAATAACCTTTATAC
CACTTCGACCCTGTTGTTTTAGCAAAACATTCTCTGGTTTCAAATCACAA
TGGATAATTCGGTTACGATGCAGAGCTTCCAAACATTGAAGCATAGAATG
TGCAAATTTTCGCACAAGTTGCAAAGAAAAGCCCTGAAACTTATTCTTCT
TTATCAGCTCATAGAGATTGATGCTTAATAACTCAAATGTGATACAAGTG
TGATTACGAAAGGTGAAGTGCTCCAACATATGTATGGTATTAAAGTTATT
TTCCTTGTCTTGTTTACGTAAATGTTCTAAGATTCTAATTTCTTCAGCAG
CTTGCCGGTGAAAACGTTTCTCATTACGAATAATTTTCAGCGCAACTTGG
GATTGAGTTTTGTGGTCAAAAGCCTTGATTACAGAACCAAAACTACCTTT
TCCGATTACTTTCAAAACCTCATATCTATATTGAATATGATCATGAGGGA
CCAACATGTAGGATCCTTGATCATCATCATATCCATTGTTATTTGCTCCT
CCAACTGCACCCTGTCTCTTCTTTGCATTGGGTCCAACAAAGTAAACTTG
AGGGAAATTAAAGACTTCATGATGTTCAAATGAAGATAGCTTGTGCATGT
ACAGCTGCATTGCTCTCTCTGGAGTTAAAGGTTGCCCTTTACTCCTTGAT
GAGTCGTTTGACATGCTTGACTGTCGATCTGCTGAACTTGTATCCCTGTG
ATTACTTGTAttgttattgttgttattaGTGACACTGCCGCTGTTATTGT
TGATATTATTTGAAACTGTTGGTAAGGGTCTTTTTTCTGATTTACCTTTG
TTCGCAGTACCATCTTCATCGTAAAGTTGTTGAACTTGAACAGAACCCAA
GTGAGGTAGTGAATGTCCGATCGAGTCTTGATTCAATCTGGTCATGGAAC
CCTTCGTAGATGCTTTCAATGGAGGCAGGACTTCGCCGTGACCTCTCATG
CTGTCTGAATGGTGGTGAATCGTATCTTTGGCACCAGTCATTAAAGGATC
ATTCGACATAAAAAACAAATTAGACCTGGTAGCTGTTAACATAATAAAAC
GTACGTTCCATCTGTTCTATGAAGTACTTCTCAGAGTAAGAATCTCGTAT
CCTGTACTTAGAAACTTGATTTATTTTTCCACAACAAACACCTTTCTCTC
TGGATGACAACCGATTCATACGAAggcttcttttcaatatttgttCCTTC
AGTTACTTTGCTAAAAATCGACCAATCACAGAGTTTCCTTATCAAGGAGA
ACAATAGCGAATACGGGTTTCCTTAGAAACATAACAAAGTTTAATGACGT
CAGTAATAAATTACATCTGCATAATTATGCATAATTTATTCGAAACTTGT
CGAATACAAAATGGTAG Coding sequence (CDS) from alignment at scaffold_514:9866..14232 >TCONS_00070178 ID=TCONS_00070178|Name=TCONS_00070178|organism=Clytia hemisphaerica|type=CDS|length=1794bp|location=Sequence derived from alignment at scaffold_514:9866..14232 (Clytia hemisphaerica) TCATCTCCCAacaatttttggtaaaatagtTCTTGGATTCAAATCTGCAT TTTGATCATTAATTGAAATGTTTTCGGCTGTTCTCCTGCGATGTTTAGAT GATGGGGGATGTGTTGGCGGTAATTTATTAACAGTTATTGTTGCAGAATT CTGTCTGTTGTGCTTATTTTTCTCACTAATATGGTGATTTGTAACAGCGT TAGGATCAACAGGAGCCCTTGGTAGTCTCCTTCGTAACCATGGATGTCTG AGTGCTTGAGCTGGTTTCATTCGTTGGGAGGGATCCCACTCAAGACACTT TTTAAGAAAGTCAATAAATAAGGGATCATCGCATCCTTTCAAAGCTGTAA TAAAGTCTTTTGAAGAAGGTGGTCCTCTGTTTTTTCCAGATTTTGACCTT CCCCCATATAGCACTGTGCTTCCATCAGGCATGGTATTAACACTACAGTA TCTAGGGTATCCTTTAGAACTGATAAAGTTTTTAGCACGTTTTGAAGCTG TCAATAGCTTTTCTGGTGGCATTCCAAGTAATTCAATGACACAAGCTAAT TGATCACTTTCGTCTTCACCAGGGAACAATGGATAACCTGTTAAAAGTTC TGCTAAGATACAACCAAAACTCCACATATCAATCTCCATACCATACTTTG CACCAAGAACAACTTCTGGAGCACGATAAAAACGAGACTGGATATAAGTG TAAATGCGCTGGTGTTCATAACAACTAGACCCAAAGTCAATAACCTTTAT ACCACTTCGACCCTGTTGTTTTAGCAAAACATTCTCTGGTTTCAAATCAC AATGGATAATTCGGTTACGATGCAGAGCTTCCAAACATTGAAGCATAGAA TGTGCAAATTTTCGCACAAGTTGCAAAGAAAAGCCCTGAAACTTATTCTT CTTTATCAGCTCATAGAGATTGATGCTTAATAACTCAAATGTGATACAAG TGTGATTACGAAAGGTGAAGTGCTCCAACATATGTATGGTATTAAAGTTA TTTTCCTTGTCTTGTTTACGTAAATGTTCTAAGATTCTAATTTCTTCAGC AGCTTGCCGGTGAAAACGTTTCTCATTACGAATAATTTTCAGCGCAACTT GGGATTGAGTTTTGTGGTCAAAAGCCTTGATTACAGAACCAAAACTACCT TTTCCGATTACTTTCAAAACCTCATATCTATATTGAATATGATCATGAGG GACCAACATGTAGGATCCTTGATCATCATCATATCCATTGTTATTTGCTC CTCCAACTGCACCCTGTCTCTTCTTTGCATTGGGTCCAACAAAGTAAACT TGAGGGAAATTAAAGACTTCATGATGTTCAAATGAAGATAGCTTGTGCAT GTACAGCTGCATTGCTCTCTCTGGAGTTAAAGGTTGCCCTTTACTCCTTG ATGAGTCGTTTGACATGCTTGACTGTCGATCTGCTGAACTTGTATCCCTG TGATTACTTGTAttgttattgttgttattaGTGACACTGCCGCTGTTATT GTTGATATTATTTGAAACTGTTGGTAAGGGTCTTTTTTCTGATTTACCTT TGTTCGCAGTACCATCTTCATCGTAAAGTTGTTGAACTTGAACAGAACCC AAGTGAGGTAGTGAATGTCCGATCGAGTCTTGATTCAATCTGGTCATGGA ACCCTTCGTAGATGCTTTCAATGGAGGCAGGACTTCGCCGTGACCTCTCA TGCTGTCTGAATGGTGGTGAATCGTATCTTTGGCACCAGTCATTAAAGGA TCATTCGACATAAAAAACAAATTAGACCTGGTAGCTGTTAACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00070178-exon-scaffold_514-1491911889:9866..14232 | TCONS_00070178-exon-scaffold_514-1491911889:9866..14232 | Clytia hemisphaerica | exon |
TCONS_00070178-exon-scaffold_514-1510915933:9866..14232 | TCONS_00070178-exon-scaffold_514-1510915933:9866..14232 | Clytia hemisphaerica | exon |
TCONS_00070178-exon-scaffold_514-1575043694:9866..14232 | TCONS_00070178-exon-scaffold_514-1575043694:9866..14232 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_514 | supercontig | scaffold_514:9866..14232 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
Term | Definition |
GO:0004672 | protein kinase activity |
GO:0005524 | ATP binding |
Vocabulary: Biological Process
Term | Definition |
GO:0006468 | protein phosphorylation |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
biological_process |
GO:0006468 |
protein phosphorylation |
molecular_function |
GO:0005524 |
ATP binding |
molecular_function |
GO:0004672 |
protein kinase activity |
Blast
BLAST of TCONS_00070178 vs. Swiss-Prot (Human)
Match: DYRK2 (Dual specificity tyrosine-phosphorylation-regulated kinase 2 OS=Homo sapiens GN=DYRK2 PE=1 SV=3) HSP 1 Score: 689.493 bits (1778), Expect = 0.000e+0 Identity = 332/461 (72.02%), Postives = 383/461 (83.08%), Query Frame = 2
Query: 728 KGQPLTPERAMQLYMHKLSSFEHHEVFNFPQVYFVGPNAKKRQGAVGGANNNGYDDDQGSYMLVPHDHIQYRYEVLKVIGKGSFGSVIKAFDHKTQSQVALKIIRNEKRFHRQAAEEIRILEHLRKQDKENNFNTIHMLEHFTFRNHTCITFELLSINLYELIKKNKFQGFSLQLVRKFAHSMLQCLEALHRNRIIHCDLKPENVLLKQQGRSGIKVIDFGSSCYEHQRIYTYIQSRFYRAPEVVLGAKYGMEIDMWSFGCILAELLTGYPLFPGEDESDQLACVIELLGMPPEKLLTASKRAKNFISSKGYPRYCSVNTMPDGSTVLYGGRSKSGKNRGPPSSKDFITALKGCDDPLFIDFLKKCLEWDPSQRMKPAQAXXXXXXXXXXXXXXVDPNAVTNHHISEKNKHNRQNSATITVNKLPPTHPPSSKHRRRTAENISINDQNADLNPRTILPKIV 2110
K P+TPE+AM+ YM KL++FEHHE+F++P++YF+G NAKKRQG GG NN GYDDDQGSY+ VPHDH+ YRYEVLKVIGKGSFG V+KA+DHK VALK++RNEKRFHRQAAEEIRILEHLRKQDK+N N IHMLE+FTFRNH C+TFELLS+NLYELIKKNKFQGFSL LVRKFAHS+LQCL+ALH+NRIIHCDLKPEN+LLKQQGRSGIKVIDFGSSCYEHQR+YTYIQSRFYRAPEV+LGA+YGM IDMWS GCILAELLTGYPL PGEDE DQLAC+IELLGMP +KLL ASKRAKNF+SSKGYPRYC+V T+ DGS VL GGRS+ GK RGPP S+++ ALKGCDDPLF+DFLK+CLEWDP+ RM P QALRHPWLRRRL P T S K + A +++KLPP +SK R A+ + D N ++ RT+LPK+V
Sbjct: 150 KATPMTPEQAMKQYMQKLTAFEHHEIFSYPEIYFLGLNAKKRQGMTGGPNNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRL------PKPPTGEKTSVK-RITESTGAITSISKLPPPSSSASKLRTNLAQ---MTDANGNIQQRTVLPKLV 600
The following BLAST results are available for this feature:
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