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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070178 ID=TCONS_00070178|Name=TCONS_00070178|organism=Clytia hemisphaerica|type=transcript|length=4367bp
CTACCATTTTGTATTCGACAAGTTTCGAATAAATTATGCATAATTATGCA
GATGTAATTTATTACTGACGTCATTAAACTTTGTTATGTTTCTAAGGAAA
CCCGTATTCGCTATTGTTCTCCTTGATAAGGAAACTCTGTGATTGGTCGA
TTTTTAGCAAAGTAACTGAAGGaacaaatattgaaaagaagccTTCGTAT
GAATCGGTTGTCATCCAGAGAGAAAGGTGTTTGTTGTGGAAAAATAAATC
AAGTTTCTAAGTACAGGATACGAGATTCTTACTCTGAGAAGTACTTCATA
GAACAGATGGAACGTACGTTTTATTATGTTAACAGCTACCAGGTCTAATT
TGTTTTTTATGTCGAATGATCCTTTAATGACTGGTGCCAAAGATACGATT
CACCACCATTCAGACAGCATGAGAGGTCACGGCGAAGTCCTGCCTCCATT
GAAAGCATCTACGAAGGGTTCCATGACCAGATTGAATCAAGACTCGATCG
GACATTCACTACCTCACTTGGGTTCTGTTCAAGTTCAACAACTTTACGAT
GAAGATGGTACTGCGAACAAAGGTAAATCAGAAAAAAGACCCTTACCAAC
AGTTTCAAATAATATCAACAATAACAGCGGCAGTGTCACtaataacaaca
ataacaaTACAAGTAATCACAGGGATACAAGTTCAGCAGATCGACAGTCA
AGCATGTCAAACGACTCATCAAGGAGTAAAGGGCAACCTTTAACTCCAGA
GAGAGCAATGCAGCTGTACATGCACAAGCTATCTTCATTTGAACATCATG
AAGTCTTTAATTTCCCTCAAGTTTACTTTGTTGGACCCAATGCAAAGAAG
AGACAGGGTGCAGTTGGAGGAGCAAATAACAATGGATATGATGATGATCA
AGGATCCTACATGTTGGTCCCTCATGATCATATTCAATATAGATATGAGG
TTTTGAAAGTAATCGGAAAAGGTAGTTTTGGTTCTGTAATCAAGGCTTTT
GACCACAAAACTCAATCCCAAGTTGCGCTGAAAATTATTCGTAATGAGAA
ACGTTTTCACCGGCAAGCTGCTGAAGAAATTAGAATCTTAGAACATTTAC
GTAAACAAGACAAGGAAAATAACTTTAATACCATACATATGTTGGAGCAC
TTCACCTTTCGTAATCACACTTGTATCACATTTGAGTTATTAAGCATCAA
TCTCTATGAGCTGATAAAGAAGAATAAGTTTCAGGGCTTTTCTTTGCAAC
TTGTGCGAAAATTTGCACATTCTATGCTTCAATGTTTGGAAGCTCTGCAT
CGTAACCGAATTATCCATTGTGATTTGAAACCAGAGAATGTTTTGCTAAA
ACAACAGGGTCGAAGTGGTATAAAGGTTATTGACTTTGGGTCTAGTTGTT
ATGAACACCAGCGCATTTACACTTATATCCAGTCTCGTTTTTATCGTGCT
CCAGAAGTTGTTCTTGGTGCAAAGTATGGTATGGAGATTGATATGTGGAG
TTTTGGTTGTATCTTAGCAGAACTTTTAACAGGTTATCCATTGTTCCCTG
GTGAAGACGAAAGTGATCAATTAGCTTGTGTCATTGAATTACTTGGAATG
CCACCAGAAAAGCTATTGACAGCTTCAAAACGTGCTAAAAACTTTATCAG
TTCTAAAGGATACCCTAGATACTGTAGTGTTAATACCATGCCTGATGGAA
GCACAGTGCTATATGGGGGAAGGTCAAAATCTGGAAAAAACAGAGGACCA
CCTTCTTCAAAAGACTTTATTACAGCTTTGAAAGGATGCGATGATCCCTT
ATTTATTGACTTTCTTAAAAAGTGTCTTGAGTGGGATCCCTCCCAACGAA
TGAAACCAGCTCAAGCACTCAGACATCCATGGTTACGAAGGAGACTACCA
AGGGCTCCTGTTGATCCTAACGCTGTTACAAATCACCATATTAGTGAGAA
AAATAAGCACAACAGACAGAATTCTGCAACAATAACTGTTAATAAATTAC
CGCCAACACATCCCCCATCATCTAAACATCGCAGGAGAACAGCCGAAAAC
ATTTCAATTAATGATCAAAATGCAGATTTGAATCCAAGAactattttacc
aaaaattgtTGGGAGATGAGGGGATATTAATGGCTTTGAAATGCCGTAAg
agatttaaatttttaacttgGCAAATATGATATTTTACAGATACCTATAT
ATATTTATGCTTGAACAACTCACATACATactttaaattttcagttttat
aatttttcagctTATTACTCATCTGGTAGATTTTGCTTGTTCTTTCTTAA
AGCTTTTTCTAAAAGACTTCTCTCGGCATTTAGATAAAAAGCAATTATGC
ATGATGAATGAGATTACAAAATAATAGTGGTAGGAGAGGTGATTATGCAA
TCATTTTAATAAGGAAAATAATATTGTTTCTTGCTGTTTCGAAAGCAAAT
GTAAATGTCTGACTTTGGGGTGATTTCAGAATTACCCAGAtttgtttaaa
cttttttcaagattttcaagattttttgattcAAATCTTCAGATTTTGCA
ACGATTTGAATAAATGCTTGTTGCATTATataaagatttatcaaaaagAA
TAGCTTATTCAACTTTCATAAATCTTTAATATGCTGCTACTTAAATCTAA
TGCATTCATTCTGTAATAAATCACATTTTTAAAGAAGTTCAGGTATTCAT
TTGTCTTATGACATCCAGTAGTTATGAAGCTCAAAGTCCAATCTAGTGAA
TTTTCTTTTGAGACTTTCTGTGAAATGAAAGCAGGTGTAAGCTGAATACA
ATGTAATACAACTAGAtagattttgagttttttttattttcctctatTCT
CAAGAAATTAATCTCATTCAGCTATGCTGATTGTTCTTACTTCCGAAGGT
CTTTTGAATTAATACCTTGGAAAATTggggtttttgaaaaaattgtacaC
ACAGCTTTTAAATAAGGTCTCTTTAAATATTTACTGGTCTACATTTTTAT
CATAGTTTCTGTTTTTTATCATCCTTCTTAATTTTTATGGATTTTACCCC
TCTTCATCcttctgggggtgttttttccttttcattttctacattcattt
tctatatcaaaaaaGGAAGAGATATAAAGGAATTAGTCTCTCTGTAAGAT
AATCAATGTTTTGGAAAGAagagttttctttgttttgtgcGCCAAACATC
Tgctacaaaaataaaacttcaacatggaaaaaaaacttattttttccaat
TCAGGTACCAtattaaaatataaagttttcttttgacCCCCAAcatcttt
tattttctttttcaaagaacatttttcttttcaaattaataattaagcaa
aagaactttttaaaattgatctTCTTCAAAGCAAAATGAGTATTTTACCC
TTCGAGTTTGTTATTTTATTGGTTTTTCTCATTTGTCTGGTTCCATAACC
TTTCACCAAATTCAGACCTCAGTGTgtattataacaattttttcatCAAC
CCTGGGAagtatttttagaatttgtttaaTATTGGATAAATTTTGGGCCC
GCATAAatatctttataagaaaactttCATGAAATTCTGTTTGCATGTGC
TTGAATTcgtatttgaaagttttcttataaaaaagaaagtaatATTTCAT
GTCATACTATTTTTTATTTGGAAGTATATATTGTAACATTTTATAGAACT
TCAAGTTTGCCTTTTTCAAAAAGGGGGCTTTTAACACATTTCCAAAAGCT
ATATTCTTTCTCTATTTAAAGAAAACAGATCAATAATCAAAGGTATTATT
TTGACAGAGCGCTAGATATTGACAATGATTAATAGATTGAACTGTACTTA
TGACATTAATCTCTTGTCGTTAAGGTCAGCTTATTATTGTAATGAAATGT
TCAAATTGACCTCTAAATGCTCTAGAATTAGTAAATTTCAACAATAATAA
TCTCTTGTTTTTGGAATGTGTTTAACcccttgtaatttttttctttcctc
ctAATTTCTCAACAAtttcaaaactgttttttattaCTGTACATTGAtga
gctttgaaaatttttctcattttacacATTAAAAGTTGTTTCTCACAAAT
TGAGAGAAGGGGAAAATATGTTATGTGTCTGCTTATGTAAAAGTGTCTCA
ACCTGCAATTTGtcagactttttttaaataagttaACAAAAGGGTTGAAA
TAATCTctaagacttttttatttcaatcaatGAAAGCTTTTTTTAAGTCA
TAAATAGACTTCTTAATTATTTTAGAAGTTTTAATGTATATATactatat
tattatattatagtGAATGCAAGGCAAAAAGATAACATGTAAATTAGTTT
TTTGCAAGAGATATGGA Run BLAST on NCBI protein sequence of TCONS_00070178-protein >TCONS_00070178-protein ID=TCONS_00070178-protein|Name=TCONS_00070178-protein|organism=Clytia hemisphaerica|type=polypeptide|length=597bp
MLTATRSNLFFMSNDPLMTGAKDTIHHHSDSMRGHGEVLPPLKASTKGSM
TRLNQDSIGHSLPHLGSVQVQQLYDEDGTANKGKSEKRPLPTVSNNINNN
SGSVTNNNNNNTSNHRDTSSADRQSSMSNDSSRSKGQPLTPERAMQLYMH
KLSSFEHHEVFNFPQVYFVGPNAKKRQGAVGGANNNGYDDDQGSYMLVPH
DHIQYRYEVLKVIGKGSFGSVIKAFDHKTQSQVALKIIRNEKRFHRQAAE
EIRILEHLRKQDKENNFNTIHMLEHFTFRNHTCITFELLSINLYELIKKN
KFQGFSLQLVRKFAHSMLQCLEALHRNRIIHCDLKPENVLLKQQGRSGIK
VIDFGSSCYEHQRIYTYIQSRFYRAPEVVLGAKYGMEIDMWSFGCILAEL
LTGYPLFPGEDESDQLACVIELLGMPPEKLLTASKRAKNFISSKGYPRYC
SVNTMPDGSTVLYGGRSKSGKNRGPPSSKDFITALKGCDDPLFIDFLKKC
LEWDPSQRMKPAQALRHPWLRRRLPRAPVDPNAVTNHHISEKNKHNRQNS
ATITVNKLPPTHPPSSKHRRRTAENISINDQNADLNPRTILPKIVGR Run BLAST on NCBI transcript from alignment at scaffold_514:9866..14232 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070178 ID=TCONS_00070178|Name=TCONS_00070178|organism=Clytia hemisphaerica|type=transcript|length=4367bp|location=Sequence derived from alignment at scaffold_514:9866..14232 (Clytia hemisphaerica)
TCCATATCTCTTGCAAAAAACTAATTTACATGTTATCTTTTTGCCTTGCA
TTCactataatataataatatagtATATATACATTAAAACTTCTAAAATA
ATTAAGAAGTCTATTTATGACTTAAAAAAAGCTTTCattgattgaaataa
aaaagtcttagAGATTATTTCAACCCTTTTGTtaacttatttaaaaaaag
tctgaCAAATTGCAGGTTGAGACACTTTTACATAAGCAGACACATAACAT
ATTTTCCCCTTCTCTCAATTTGTGAGAAACAACTTTTAATgtgtaaaatg
agaaaaattttcaaagctcaTCAATGTACAGtaataaaaaacagttttga
aaTTGTTGAGAAATTaggaggaaagaaaaaaattacaagggGTTAAACAC
ATTCCAAAAACAAGAGATTATTATTGTTGAAATTTACTAATTCTAGAGCA
TTTAGAGGTCAATTTGAACATTTCATTACAATAATAAGCTGACCTTAACG
ACAAGAGATTAATGTCATAAGTACAGTTCAATCTATTAATCATTGTCAAT
ATCTAGCGCTCTGTCAAAATAATACCTTTGATTATTGATCTGTTTTCTTT
AAATAGAGAAAGAATATAGCTTTTGGAAATGTGTTAAAAGCCCCCTTTTT
GAAAAAGGCAAACTTGAAGTTCTATAAAATGTTACAATATATACTTCCAA
ATAAAAAATAGTATGACATGAAATattactttcttttttataagaaaact
ttcaaatacgAATTCAAGCACATGCAAACAGAATTTCATGaaagttttct
tataaagatatTTATGCGGGCCCAAAATTTATCCAATAttaaacaaattc
taaaaatactTCCCAGGGTTGatgaaaaaattgttataatacACACTGAG
GTCTGAATTTGGTGAAAGGTTATGGAACCAGACAAATGAGAAAAACCAAT
AAAATAACAAACTCGAAGGGTAAAATACTCATTTTGCTTTGAAGAagatc
aattttaaaaagttcttttgcttaattattaatttgaaaagaaaaatgtt
ctttgaaaaagaaaataaaagatgTTGGGGgtcaaaagaaaactttatat
tttaataTGGTACCTGAattggaaaaaataagttttttttccatgttgaa
gttttatttttgtagcAGATGTTTGGCgcacaaaacaaagaaaactctTC
TTTCCAAAACATTGATTATCTTACAGAGAGACTAATTCCTTTATATCTCT
TCCttttttgatatagaaaatgaatgtagaaaatgaaaaggaaaaaacac
ccccagaagGATGAAGAGGGGTAAAATCCATAAAAATTAAGAAGGATGAT
AAAAAACAGAAACTATGATAAAAATGTAGACCAGTAAATATTTAAAGAGA
CCTTATTTAAAAGCTGTGtgtacaattttttcaaaaaccccAATTTTCCA
AGGTATTAATTCAAAAGACCTTCGGAAGTAAGAACAATCAGCATAGCTGA
ATGAGATTAATTTCTTGAGAatagaggaaaataaaaaaaactcaaaatct
aTCTAGTTGTATTACATTGTATTCAGCTTACACCTGCTTTCATTTCACAG
AAAGTCTCAAAAGAAAATTCACTAGATTGGACTTTGAGCTTCATAACTAC
TGGATGTCATAAGACAAATGAATACCTGAACTTCTTTAAAAATGTGATTT
ATTACAGAATGAATGCATTAGATTTAAGTAGCAGCATATTAAAGATTTAT
GAAAGTTGAATAAGCTATTctttttgataaatctttatATAATGCAACAA
GCATTTATTCAAATCGTTGCAAAATCTGAAGATTTgaatcaaaaaatctt
gaaaatcttgaaaaaagtttaaacaaaTCTGGGTAATTCTGAAATCACCC
CAAAGTCAGACATTTACATTTGCTTTCGAAACAGCAAGAAACAATATTAT
TTTCCTTATTAAAATGATTGCATAATCACCTCTCCTACCACTATTATTTT
GTAATCTCATTCATCATGCATAATTGCTTTTTATCTAAATGCCGAGAGAA
GTCTTTTAGAAAAAGCTTTAAGAAAGAACAAGCAAAATCTACCAGATGAG
TAATAagctgaaaaattataaaactgaaaatttaaagtATGTATGTGAGT
TGTTCAAGCATAAATATATATAGGTATCTGTAAAATATCATATTTGCcaa
gttaaaaatttaaatctcTTACGGCATTTCAAAGCCATTAATATCCCCTC
ATCTCCCAacaatttttggtaaaatagtTCTTGGATTCAAATCTGCATTT
TGATCATTAATTGAAATGTTTTCGGCTGTTCTCCTGCGATGTTTAGATGA
TGGGGGATGTGTTGGCGGTAATTTATTAACAGTTATTGTTGCAGAATTCT
GTCTGTTGTGCTTATTTTTCTCACTAATATGGTGATTTGTAACAGCGTTA
GGATCAACAGGAGCCCTTGGTAGTCTCCTTCGTAACCATGGATGTCTGAG
TGCTTGAGCTGGTTTCATTCGTTGGGAGGGATCCCACTCAAGACACTTTT
TAAGAAAGTCAATAAATAAGGGATCATCGCATCCTTTCAAAGCTGTAATA
AAGTCTTTTGAAGAAGGTGGTCCTCTGTTTTTTCCAGATTTTGACCTTCC
CCCATATAGCACTGTGCTTCCATCAGGCATGGTATTAACACTACAGTATC
TAGGGTATCCTTTAGAACTGATAAAGTTTTTAGCACGTTTTGAAGCTGTC
AATAGCTTTTCTGGTGGCATTCCAAGTAATTCAATGACACAAGCTAATTG
ATCACTTTCGTCTTCACCAGGGAACAATGGATAACCTGTTAAAAGTTCTG
CTAAGATACAACCAAAACTCCACATATCAATCTCCATACCATACTTTGCA
CCAAGAACAACTTCTGGAGCACGATAAAAACGAGACTGGATATAAGTGTA
AATGCGCTGGTGTTCATAACAACTAGACCCAAAGTCAATAACCTTTATAC
CACTTCGACCCTGTTGTTTTAGCAAAACATTCTCTGGTTTCAAATCACAA
TGGATAATTCGGTTACGATGCAGAGCTTCCAAACATTGAAGCATAGAATG
TGCAAATTTTCGCACAAGTTGCAAAGAAAAGCCCTGAAACTTATTCTTCT
TTATCAGCTCATAGAGATTGATGCTTAATAACTCAAATGTGATACAAGTG
TGATTACGAAAGGTGAAGTGCTCCAACATATGTATGGTATTAAAGTTATT
TTCCTTGTCTTGTTTACGTAAATGTTCTAAGATTCTAATTTCTTCAGCAG
CTTGCCGGTGAAAACGTTTCTCATTACGAATAATTTTCAGCGCAACTTGG
GATTGAGTTTTGTGGTCAAAAGCCTTGATTACAGAACCAAAACTACCTTT
TCCGATTACTTTCAAAACCTCATATCTATATTGAATATGATCATGAGGGA
CCAACATGTAGGATCCTTGATCATCATCATATCCATTGTTATTTGCTCCT
CCAACTGCACCCTGTCTCTTCTTTGCATTGGGTCCAACAAAGTAAACTTG
AGGGAAATTAAAGACTTCATGATGTTCAAATGAAGATAGCTTGTGCATGT
ACAGCTGCATTGCTCTCTCTGGAGTTAAAGGTTGCCCTTTACTCCTTGAT
GAGTCGTTTGACATGCTTGACTGTCGATCTGCTGAACTTGTATCCCTGTG
ATTACTTGTAttgttattgttgttattaGTGACACTGCCGCTGTTATTGT
TGATATTATTTGAAACTGTTGGTAAGGGTCTTTTTTCTGATTTACCTTTG
TTCGCAGTACCATCTTCATCGTAAAGTTGTTGAACTTGAACAGAACCCAA
GTGAGGTAGTGAATGTCCGATCGAGTCTTGATTCAATCTGGTCATGGAAC
CCTTCGTAGATGCTTTCAATGGAGGCAGGACTTCGCCGTGACCTCTCATG
CTGTCTGAATGGTGGTGAATCGTATCTTTGGCACCAGTCATTAAAGGATC
ATTCGACATAAAAAACAAATTAGACCTGGTAGCTGTTAACATAATAAAAC
GTACGTTCCATCTGTTCTATGAAGTACTTCTCAGAGTAAGAATCTCGTAT
CCTGTACTTAGAAACTTGATTTATTTTTCCACAACAAACACCTTTCTCTC
TGGATGACAACCGATTCATACGAAggcttcttttcaatatttgttCCTTC
AGTTACTTTGCTAAAAATCGACCAATCACAGAGTTTCCTTATCAAGGAGA
ACAATAGCGAATACGGGTTTCCTTAGAAACATAACAAAGTTTAATGACGT
CAGTAATAAATTACATCTGCATAATTATGCATAATTTATTCGAAACTTGT
CGAATACAAAATGGTAG Coding sequence (CDS) from alignment at scaffold_514:9866..14232 >TCONS_00070178 ID=TCONS_00070178|Name=TCONS_00070178|organism=Clytia hemisphaerica|type=CDS|length=1794bp|location=Sequence derived from alignment at scaffold_514:9866..14232 (Clytia hemisphaerica)
TCATCTCCCAacaatttttggtaaaatagtTCTTGGATTCAAATCTGCAT
TTTGATCATTAATTGAAATGTTTTCGGCTGTTCTCCTGCGATGTTTAGAT
GATGGGGGATGTGTTGGCGGTAATTTATTAACAGTTATTGTTGCAGAATT
CTGTCTGTTGTGCTTATTTTTCTCACTAATATGGTGATTTGTAACAGCGT
TAGGATCAACAGGAGCCCTTGGTAGTCTCCTTCGTAACCATGGATGTCTG
AGTGCTTGAGCTGGTTTCATTCGTTGGGAGGGATCCCACTCAAGACACTT
TTTAAGAAAGTCAATAAATAAGGGATCATCGCATCCTTTCAAAGCTGTAA
TAAAGTCTTTTGAAGAAGGTGGTCCTCTGTTTTTTCCAGATTTTGACCTT
CCCCCATATAGCACTGTGCTTCCATCAGGCATGGTATTAACACTACAGTA
TCTAGGGTATCCTTTAGAACTGATAAAGTTTTTAGCACGTTTTGAAGCTG
TCAATAGCTTTTCTGGTGGCATTCCAAGTAATTCAATGACACAAGCTAAT
TGATCACTTTCGTCTTCACCAGGGAACAATGGATAACCTGTTAAAAGTTC
TGCTAAGATACAACCAAAACTCCACATATCAATCTCCATACCATACTTTG
CACCAAGAACAACTTCTGGAGCACGATAAAAACGAGACTGGATATAAGTG
TAAATGCGCTGGTGTTCATAACAACTAGACCCAAAGTCAATAACCTTTAT
ACCACTTCGACCCTGTTGTTTTAGCAAAACATTCTCTGGTTTCAAATCAC
AATGGATAATTCGGTTACGATGCAGAGCTTCCAAACATTGAAGCATAGAA
TGTGCAAATTTTCGCACAAGTTGCAAAGAAAAGCCCTGAAACTTATTCTT
CTTTATCAGCTCATAGAGATTGATGCTTAATAACTCAAATGTGATACAAG
TGTGATTACGAAAGGTGAAGTGCTCCAACATATGTATGGTATTAAAGTTA
TTTTCCTTGTCTTGTTTACGTAAATGTTCTAAGATTCTAATTTCTTCAGC
AGCTTGCCGGTGAAAACGTTTCTCATTACGAATAATTTTCAGCGCAACTT
GGGATTGAGTTTTGTGGTCAAAAGCCTTGATTACAGAACCAAAACTACCT
TTTCCGATTACTTTCAAAACCTCATATCTATATTGAATATGATCATGAGG
GACCAACATGTAGGATCCTTGATCATCATCATATCCATTGTTATTTGCTC
CTCCAACTGCACCCTGTCTCTTCTTTGCATTGGGTCCAACAAAGTAAACT
TGAGGGAAATTAAAGACTTCATGATGTTCAAATGAAGATAGCTTGTGCAT
GTACAGCTGCATTGCTCTCTCTGGAGTTAAAGGTTGCCCTTTACTCCTTG
ATGAGTCGTTTGACATGCTTGACTGTCGATCTGCTGAACTTGTATCCCTG
TGATTACTTGTAttgttattgttgttattaGTGACACTGCCGCTGTTATT
GTTGATATTATTTGAAACTGTTGGTAAGGGTCTTTTTTCTGATTTACCTT
TGTTCGCAGTACCATCTTCATCGTAAAGTTGTTGAACTTGAACAGAACCC
AAGTGAGGTAGTGAATGTCCGATCGAGTCTTGATTCAATCTGGTCATGGA
ACCCTTCGTAGATGCTTTCAATGGAGGCAGGACTTCGCCGTGACCTCTCA
TGCTGTCTGAATGGTGGTGAATCGTATCTTTGGCACCAGTCATTAAAGGA
TCATTCGACATAAAAAACAAATTAGACCTGGTAGCTGTTAACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070178-exon-scaffold_514-1491911889:9866..14232 | TCONS_00070178-exon-scaffold_514-1491911889:9866..14232 | Clytia hemisphaerica | exon |
| TCONS_00070178-exon-scaffold_514-1510915933:9866..14232 | TCONS_00070178-exon-scaffold_514-1510915933:9866..14232 | Clytia hemisphaerica | exon |
| TCONS_00070178-exon-scaffold_514-1575043694:9866..14232 | TCONS_00070178-exon-scaffold_514-1575043694:9866..14232 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_514 | supercontig | scaffold_514:9866..14232 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004672 | protein kinase activity |
| GO:0005524 | ATP binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006468 | protein phosphorylation |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006468 |
protein phosphorylation |
| molecular_function |
GO:0005524 |
ATP binding |
| molecular_function |
GO:0004672 |
protein kinase activity |
Blast
BLAST of TCONS_00070178 vs. Swiss-Prot (Human)
Match: DYRK2 (Dual specificity tyrosine-phosphorylation-regulated kinase 2 OS=Homo sapiens GN=DYRK2 PE=1 SV=3) HSP 1 Score: 689.493 bits (1778), Expect = 0.000e+0 Identity = 332/461 (72.02%), Postives = 383/461 (83.08%), Query Frame = 2
Query: 728 KGQPLTPERAMQLYMHKLSSFEHHEVFNFPQVYFVGPNAKKRQGAVGGANNNGYDDDQGSYMLVPHDHIQYRYEVLKVIGKGSFGSVIKAFDHKTQSQVALKIIRNEKRFHRQAAEEIRILEHLRKQDKENNFNTIHMLEHFTFRNHTCITFELLSINLYELIKKNKFQGFSLQLVRKFAHSMLQCLEALHRNRIIHCDLKPENVLLKQQGRSGIKVIDFGSSCYEHQRIYTYIQSRFYRAPEVVLGAKYGMEIDMWSFGCILAELLTGYPLFPGEDESDQLACVIELLGMPPEKLLTASKRAKNFISSKGYPRYCSVNTMPDGSTVLYGGRSKSGKNRGPPSSKDFITALKGCDDPLFIDFLKKCLEWDPSQRMKPAQAXXXXXXXXXXXXXXVDPNAVTNHHISEKNKHNRQNSATITVNKLPPTHPPSSKHRRRTAENISINDQNADLNPRTILPKIV 2110
K P+TPE+AM+ YM KL++FEHHE+F++P++YF+G NAKKRQG GG NN GYDDDQGSY+ VPHDH+ YRYEVLKVIGKGSFG V+KA+DHK VALK++RNEKRFHRQAAEEIRILEHLRKQDK+N N IHMLE+FTFRNH C+TFELLS+NLYELIKKNKFQGFSL LVRKFAHS+LQCL+ALH+NRIIHCDLKPEN+LLKQQGRSGIKVIDFGSSCYEHQR+YTYIQSRFYRAPEV+LGA+YGM IDMWS GCILAELLTGYPL PGEDE DQLAC+IELLGMP +KLL ASKRAKNF+SSKGYPRYC+V T+ DGS VL GGRS+ GK RGPP S+++ ALKGCDDPLF+DFLK+CLEWDP+ RM P QALRHPWLRRRL P T S K + A +++KLPP +SK R A+ + D N ++ RT+LPK+V
Sbjct: 150 KATPMTPEQAMKQYMQKLTAFEHHEIFSYPEIYFLGLNAKKRQGMTGGPNNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRL------PKPPTGEKTSVK-RITESTGAITSISKLPPPSSSASKLRTNLAQ---MTDANGNIQQRTVLPKLV 600
The following BLAST results are available for this feature:
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