TCONS_00070147 (transcript) - C. hemisphaerica

Overview
NameTCONS_00070147
Unique NameTCONS_00070147
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length161

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00070147 ID=TCONS_00070147|Name=TCONS_00070147|organism=Clytia hemisphaerica|type=transcript|length=161bp
CGACTGTACTGAATATGTGCTTGTTTGGATCAATAAAATAGGAGGAAAAT
ACGTACCTCCTCTGAAGCTGGTCTTGATTGGATGAGATGTGATGCACTTG
AGCAGCACGTACTTCTTTGGATGCTTGTTGGAGTTCAGATTGATCCAGCG
AGATGTCTTCT
Run BLAST on NCBI

transcript from alignment at scaffold_513:309138..309298

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00070147 ID=TCONS_00070147|Name=TCONS_00070147|organism=Clytia hemisphaerica|type=transcript|length=161bp|location=Sequence derived from alignment at scaffold_513:309138..309298 (Clytia hemisphaerica)
AGAAGACATCTCGCTGGATCAATCTGAACTCCAACAAGCATCCAAAGAAG
TACGTGCTGCTCAAGTGCATCACATCTCATCCAATCAAGACCAGCTTCAG
AGGAGGTACGTATTTTCCTCCTATTTTATTGATCCAAACAAGCACATATT
CAGTACAGTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_043681XLOC_043681Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00070147-exon-scaffold_513-1491911889:309138..309298TCONS_00070147-exon-scaffold_513-1491911889:309138..309298Clytia hemisphaericaexon
TCONS_00070147-exon-scaffold_513-1510915933:309138..309298TCONS_00070147-exon-scaffold_513-1510915933:309138..309298Clytia hemisphaericaexon
TCONS_00070147-exon-scaffold_513-1575043694:309138..309298TCONS_00070147-exon-scaffold_513-1575043694:309138..309298Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_513supercontigscaffold_513:309138..309298 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00070147 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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