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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070071 ID=TCONS_00070071|Name=TCONS_00070071|organism=Clytia hemisphaerica|type=transcript|length=1338bp
ATCAGAATGGCCTGTGTCATTGAAATGATGAACAGGTGCATGCTAACTGG
AGTTGTTGCAACAGAAGCAAACAATATTCTTAACGATATCGTTAACACTG
TTGCAATGCTGGACGGGGCTGCTGAGCACCAAGGGGAAGTGAGCGaggta
tttcaaaattattttctgtgataaaaaatatttgacttttcagaaaaatt
tgtccaaaatGTACCCATGATCATAAATTAAAGtgaagaatttaattttg
ctaaTATTTTCTTAAATACAGGTAATAAAGTGCGAGCGTTAAAGCTTCTT
TTATGACAATTGAGACAGGACTTTCAGGAGTGGGCCAAAAAAGCAATTTT
AAACAAcccaaatattttttgcaattaGGAAGCAAGCATCAAAGTGAGCA
AAGAAAGTGTCGACCTCGCAATTATTTTGGTGAACATTTCTTTGAGCCAA
TCAGGtaattttaattatttaaactatagaattttaaaaatcaatgcTCT
TGAGCAGGCGTCTGAAAAAGAGAcaaaatcatattttatgatattTCGAG
TTAAtggatttgaaaaaatgaactATCTAAGTTTAAAAATTCACCTCGGT
AGTTCTACTACTTAACTACAAGGCTACTATTGTTTATTTAAGCATGTATT
CATGGTGAAAAGGAGGAAGAAATTCCAAATGTTAAAACGAAAAGTCCAGA
GGCAAAGAAGAAAATGGCAAAACAGCTGATTTTGACAACTTCTGGGCAAG
TAGTATCAGCCCCACTTTTGACTAAAAACAACAAAGTCACAAAATTGGCT
CCTAAAGGTCATACACAGGCACAATATCTTGCAGCAATTTTCCGTCAGCT
GGAAAGTGAAGGTTTTGGTACGGTCAAAGTTAGAGTTGCAAACAACGGGC
ATAATGTAAGTAGACTTTtagcttttattttgaaatgctTTAAGTTTTAA
CCGTGTATTAAATAATTATTAtatcttgaaaaataaaattgcaaATCTTC
ATCTGAATATAACTTGACCCTTTATCTCCAAAACAGGATTGAAGCACGAT
tcataattttataaaattcaGATTTGCTTTTGATTCCTAGATACTTTACT
TCTAAAAGTCAACGTATGCAGACGACATGAAGGCTCCATTAGAAGCATTA
GGAATTTCTGTGGAGCAATACAGGGGCATCTTTGAAGTAAAAAACCTTGA
AAGGTAAGTTGAAATTTtattctcttttatttttttctctttttatcaTG
TAAGGcgagacaaaaaaaatttaagttatTGTTCTGCGGGCCTGACCGAC
CCTGTTTattccaaaatccaaaaaattataatattgaa Run BLAST on NCBI transcript from alignment at scaffold_513:195092..196429+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070071 ID=TCONS_00070071|Name=TCONS_00070071|organism=Clytia hemisphaerica|type=transcript|length=1338bp|location=Sequence derived from alignment at scaffold_513:195092..196429+ (Clytia hemisphaerica)
ATCAGAATGGCCTGTGTCATTGAAATGATGAACAGGTGCATGCTAACTGG
AGTTGTTGCAACAGAAGCAAACAATATTCTTAACGATATCGTTAACACTG
TTGCAATGCTGGACGGGGCTGCTGAGCACCAAGGGGAAGTGAGCGaggta
tttcaaaattattttctgtgataaaaaatatttgacttttcagaaaaatt
tgtccaaaatGTACCCATGATCATAAATTAAAGtgaagaatttaattttg
ctaaTATTTTCTTAAATACAGGTAATAAAGTGCGAGCGTTAAAGCTTCTT
TTATGACAATTGAGACAGGACTTTCAGGAGTGGGCCAAAAAAGCAATTTT
AAACAAcccaaatattttttgcaattaGGAAGCAAGCATCAAAGTGAGCA
AAGAAAGTGTCGACCTCGCAATTATTTTGGTGAACATTTCTTTGAGCCAA
TCAGGtaattttaattatttaaactatagaattttaaaaatcaatgcTCT
TGAGCAGGCGTCTGAAAAAGAGAcaaaatcatattttatgatattTCGAG
TTAAtggatttgaaaaaatgaactATCTAAGTTTAAAAATTCACCTCGGT
AGTTCTACTACTTAACTACAAGGCTACTATTGTTTATTTAAGCATGTATT
CATGGTGAAAAGGAGGAAGAAATTCCAAATGTTAAAACGAAAAGTCCAGA
GGCAAAGAAGAAAATGGCAAAACAGCTGATTTTGACAACTTCTGGGCAAG
TAGTATCAGCCCCACTTTTGACTAAAAACAACAAAGTCACAAAATTGGCT
CCTAAAGGTCATACACAGGCACAATATCTTGCAGCAATTTTCCGTCAGCT
GGAAAGTGAAGGTTTTGGTACGGTCAAAGTTAGAGTTGCAAACAACGGGC
ATAATGTAAGTAGACTTTtagcttttattttgaaatgctTTAAGTTTTAA
CCGTGTATTAAATAATTATTAtatcttgaaaaataaaattgcaaATCTTC
ATCTGAATATAACTTGACCCTTTATCTCCAAAACAGGATTGAAGCACGAT
tcataattttataaaattcaGATTTGCTTTTGATTCCTAGATACTTTACT
TCTAAAAGTCAACGTATGCAGACGACATGAAGGCTCCATTAGAAGCATTA
GGAATTTCTGTGGAGCAATACAGGGGCATCTTTGAAGTAAAAAACCTTGA
AAGGTAAGTTGAAATTTtattctcttttatttttttctctttttatcaTG
TAAGGcgagacaaaaaaaatttaagttatTGTTCTGCGGGCCTGACCGAC
CCTGTTTattccaaaatccaaaaaattataatattgaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070071-exon-scaffold_513-1491911889:195092..196429 | TCONS_00070071-exon-scaffold_513-1491911889:195092..196429 | Clytia hemisphaerica | exon |
| TCONS_00070071-exon-scaffold_513-1510915933:195092..196429 | TCONS_00070071-exon-scaffold_513-1510915933:195092..196429 | Clytia hemisphaerica | exon |
| TCONS_00070071-exon-scaffold_513-1575043694:195092..196429 | TCONS_00070071-exon-scaffold_513-1575043694:195092..196429 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_513 | supercontig | scaffold_513:195092..196429 + |
Blast
The following BLAST results are available for this feature:
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