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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00070069 ID=TCONS_00070069|Name=TCONS_00070069|organism=Clytia hemisphaerica|type=transcript|length=596bp
GTTTGGTCTGCGATTTCTTCATTGGACAAGCCTGAAAGTCAGTAAAGTGG
GGAAAAAGGTATTACATACCGGTGGTGGCGGACTATGCGTTATAGTGCTT
GTCAAATGTTTTGGNAAAATTCTTTTGATTATTCTTTAAAGGTATTACAT
ACCAGTGGTGGCGGACTATGCGTTATGGTGCTTGTCAAATGTTTTGGATT
TGATTTCTTTACTGGACAAGCCTGAATAAACAGAAGAAAAGGATATTCAA
TCTAAACTACCTTTATCTGAGGATTAGAATAGGCGATTGGTACCATATca
atttcctgaaaaataaaCGAGAAGTCAGCATCATATCAAACTTGTTGATA
GAGACATTCGATCGGACACTAGAAGGACAGTGTGAGTATCtagattaatt
tttgaaaaaaaatctaatgaaatgaTAAGATGGCTCAATTTCAATTATGT
TTTAACAAATTGTCAACATTAGAATAAATGGCAGGACATGAAAAAGTTAA
ATTATGTCGTGAAAAATTGATCTTTTGAGCTACTAAGTTTGGTAACAGAT
TCCTGCCTTACCTTCATTTCCTTCGATTTTCTTCATGGGGGAGAAC Run BLAST on NCBI transcript from alignment at scaffold_513:123079..124282+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00070069 ID=TCONS_00070069|Name=TCONS_00070069|organism=Clytia hemisphaerica|type=transcript|length=1204bp|location=Sequence derived from alignment at scaffold_513:123079..124282+ (Clytia hemisphaerica)
GTTTGGTCTGCGATTTCTTCATTGGACAAGCCTGAAAGTCAGTAAAGTGG
GGAAAAAGGTAAGATGAAAATTTCCTATCATTTTAtgtggaaaagatttt
ttcatataCTTTAGATACAACAAGTCTCTACCTTTTTATAGGTTTAATAA
TTGTTAAATTCATTCATCTGAAAGCTAACTtagaaaattcttttgattat
TCTTTAAAGGTATTACATACCGGTGGTGGCGGACTATGCGTTATAGTGCT
TGTCAAATGTTTTGGNAAAATTCTTTTGATTATTCTTTAAAGGTATTACA
TACCAGTGGTGGCGGACTATGCGTTATGGTGCTTGTCAAATGTTTTGGAT
TTGATTTCTTTACTGGACAAGCCTGAATAAACAGAAGAAAAGGTAAGATT
ACTCATGGTTTATATGTTAAATCTAAACCagaagttttcttttcatttat
aGCACATATTTTTGTTGTAGATGTGGTACATAATTTAAGACCATGCAAAT
AATTTTTCCAGCCAAGTAGTTCACCAAGTTATTACAGAACATGAGCTgaa
attgcttaaaaatttATTAATTGGTGTGTGGGGGACTCGGGCCCTTTAAG
AATGTTGGAAAGCTGGACTAGAGCCTCTTTAAAATTAAGTTAATATAATG
TTAAGTACCTTTGGTCTGTTTTTCATGAAAGGTTTATCCTGTGATTTCTG
GAAAAATAATGATTctttaataaattttcaaatttatttagaCACTAGCT
TGAATTGGTGGGGTCTGCATTTGAAGTGTAAATTTAGTTGTGGTAATTAC
AGTTAAAGATTAAACCCTCACTTAATTAAACTTATTTTTTATTGTACAGG
ATATTCAATCTAAACTACCTTTATCTGAGGATTAGAATAGGCGATTGGTA
CCATATcaatttcctgaaaaataaaCGAGAAGTCAGCATCATATCAAACT
TGTTGATAGAGACATTCGATCGGACACTAGAAGGACAGTGTGAGTATCta
gattaatttttgaaaaaaaatctaatgaaatgaTAAGATGGCTCAATTTC
AATTATGTTTTAACAAATTGTCAACATTAGAATAAATGGCAGGACATGAA
AAAGTTAAATTATGTCGTGAAAAATTGATCTTTTGAGCTACTAAGTTTGG
TAACAGATTCCTGCCTTACCTTCATTTCCTTCGATTTTCTTCATGGGGGA
GAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00070069-exon-scaffold_513-1491911889:123079..123136 | TCONS_00070069-exon-scaffold_513-1491911889:123079..123136 | Clytia hemisphaerica | exon |
| TCONS_00070069-exon-scaffold_513-1510915933:123079..123136 | TCONS_00070069-exon-scaffold_513-1510915933:123079..123136 | Clytia hemisphaerica | exon |
| TCONS_00070069-exon-scaffold_513-1575043694:123079..123136 | TCONS_00070069-exon-scaffold_513-1575043694:123079..123136 | Clytia hemisphaerica | exon |
| TCONS_00070069-exon-scaffold_513-1491911889:123288..123470 | TCONS_00070069-exon-scaffold_513-1491911889:123288..123470 | Clytia hemisphaerica | exon |
| TCONS_00070069-exon-scaffold_513-1510915933:123288..123470 | TCONS_00070069-exon-scaffold_513-1510915933:123288..123470 | Clytia hemisphaerica | exon |
| TCONS_00070069-exon-scaffold_513-1575043694:123288..123470 | TCONS_00070069-exon-scaffold_513-1575043694:123288..123470 | Clytia hemisphaerica | exon |
| TCONS_00070069-exon-scaffold_513-1491911889:123928..124282 | TCONS_00070069-exon-scaffold_513-1491911889:123928..124282 | Clytia hemisphaerica | exon |
| TCONS_00070069-exon-scaffold_513-1510915933:123928..124282 | TCONS_00070069-exon-scaffold_513-1510915933:123928..124282 | Clytia hemisphaerica | exon |
| TCONS_00070069-exon-scaffold_513-1575043694:123928..124282 | TCONS_00070069-exon-scaffold_513-1575043694:123928..124282 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_513 | supercontig | scaffold_513:123079..124282 + |
Blast
The following BLAST results are available for this feature:
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