|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069959 ID=TCONS_00069959|Name=TCONS_00069959|organism=Clytia hemisphaerica|type=transcript|length=2059bp
NGCTTATGTAATTTGAATGAAATCTAACGTTAATAACAAAACAGCCatcc
tttttttttaagaaacccTGAGAACAAGATAATTTGTTAAAGTCATATGC
TGATATTATGCTTGTCTTCTGACATCTGCTGGCGAAAGTgtaattgaatt
ttaaaatattgtcACAGTATGCCTTGTAAAAAACTACGGTTTAGTCTTTT
TTTGtattatcaaaatttatgtAACCTTGATGTAACCTAAGATTGGATTG
AAAACACCTCAACGTTTTTCGACACTAAACCAAACATCGCCTTTGGGAAA
TTGGGAGCGCGATTTGGGGTCTGGAATCAATTCATCCACAGTTTTCGAAC
ACGGGATGACTTTATATTTACTCAACATGCGGGCCACCACAATTTTCACT
TCCATGGTGGCAAAACGTTGCGCAATACAATTTCTCGGACCGTGTCCGAA
TCCACCGGACGCGAACGGGTGTCTGTCAGCTTTCTTTTCGGCACTGAAAT
TCTCAGGGTCAAAAACATTCGGGTTGGAGAaatatttctcatcttttaca
ataCCAGTGACGGGAAAACGGACAACGATATCTTTCGGGATGACCATTTC
AGTGCCTGGAATTTTGTAATCGTTAACTGAACCACGTTCCAAGTGGGTCA
CAGGATACATTCTAAGACTCTCTTGGAAGAATTTCTCCATATACGGCATA
TTCATGATAGCAGCGTAATCGAATTGATCAGAGCATGTTGACTCGATACT
TTCTTTGATCTCTTGGTAAAGTTTCTCTTGGCAATCCTGGTTTTTAGCCA
AGAAATACATCATCATGGAGGAAGTACTTGAAACAGTATCAACACCAGCG
ATTAACATGATCAGGGAGTTCGCGATGACAATTCTCTCGATTTCGTCTTT
TTGTCGTTTCGTTTCTTCTGACTTTTCATTTGTCttgatttcttcatttt
ccttctGAAGGATATCGAGACAAGTATCAATAAAGTCATTGCGTCTCTCC
CCACTCTCCTGGCGTTCTTTGATCGCCTTCCTAACAGCTGCAACAAAAAA
ACCCTCTCCTTTCTTGTCAAGAAGCGGCCAATCCAGTTTCCTCAATAAAC
TtgggaaaaacaaaaacattaggAAAGTCAAAAATATCTTGATACTCATT
GTTTTGCCAACCATCAAGTCTGCGTTCGTCTTGAAGATGCTGTTAGTCTC
ATTGACGCTATCGCTCTCATAACCAAAACCTGTGCTTACAATCACATCTA
ATGCATAGTTTCGCAATAATTCTTTGGCTTCGATTTCTTTACCAACattt
ttctccaaaaagacATCGCAGTGATCGGCAATTTCGTGTATGAGCGGAAC
CATGGCTTTTAGTTTCCCACTGGTAAAAACAGGTGTCAGTGAAGCTCGAA
CACTCTTCCATTGCTGGCCACGCAGTTCAGTTAGCATTACTGGTAAATAT
CGGTTGTTCTTTGTGTGAGGATTGTAAGCGTTAGAAGAGGCCGGCTTTCT
TTCCATGAATTGGTCGAAATCTTTCACCAAAACTTTCTTAGCAATATCCA
AGTCTCGAATCACGATGCTTGGACGACCAAATAATTCATACGTCCCAACA
ACAGGGGCATCTGGGTAATTCTTGTAAGCATGATCCGTCATTTGGATGAA
AGCGATTTTCTGCTTGAAGAAATCCCACAAATGTTGACTTCCAAATGGAA
AGGTTCCAGGATCGACAGGAACACCTCGACGCTGCCAAAATGTCATCCTA
TGTCTGACATAGAAATAAAAGGCTGTAAAAGCCACGATAAACGCAGTTAA
CAATATCTGCCACCACATTACGCTAAATCTTCTTGCTTGTTGTGTAGCTC
TTTTTACTGTTGGCAAAAGTTCTGTAAACTTTAAATTGTAAAGACTGTTA
TTAAAATGCAAGTTTTCTCATGCATCTGTTTATAAAGTTTCAAGATTTGA
TGAAAtcatcaaatttcaaaacatgaaAGACTCTCCATCGTAtttatttt
aaccttttttagaAGAAGGTTTTTGTTGACTGTTCCATAAAATTGATTAT
TTCCTTCAT Run BLAST on NCBI transcript from alignment at scaffold_511:209766..219328- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069959 ID=TCONS_00069959|Name=TCONS_00069959|organism=Clytia hemisphaerica|type=transcript|length=9563bp|location=Sequence derived from alignment at scaffold_511:209766..219328- (Clytia hemisphaerica)
NGCTTATGTAATTTGAATGAAATCTAACGTTAATAACAAAACAGCCATCC
TTTTTTTTTAAGAAACCCTGAGAACAAGATAATTTGTTAAAGTCATATGC
TGATATTATGCTTGTCTTCTGACATCTGCTGGCGAAAGTGTAATTGAATT
TTAAAATATTGTCACAGTATGCCTTGTAAAAAACTACGGTTTAGTCTTTT
TTTGTATTATCAAAATTTATGTAACCTTGATGTAACCTAAGATTGGATTG
AAAACACCTCAACGTTTTTCGACACTAAACCAAACATCGCCTTTGGGAAA
TTGGGAGCGCGATTTGGGGTCTGGAATCAATTCATCCACAGTTTTCGAAC
ACGGGATGACTTTATATTTACTCAACATGCGGGCCACCACAATTTTCACT
TCCATGGTGGCAAAACGTTGCGCAATACAATTTCTCGGACCGTGTCCGAA
TCCACCGGACGCGAACGGGTGTCTGTCAGCTTTCTTTTCGGCACTGAAAT
TCTCAGGGTCAAAAACATTCGGGTTGGAGAAATATTTCTCATCTTTTACA
ATACCAGTGACGGGAAAACGGACAACGATATCTTTCGGGATGACCATTTC
AGTGCCTGGAATTTTGTAATCGTTAACTGAACCACGTTCCAAGTGGGTCA
CAGGATACATTCTAAGACTCTCTTGGAAGAATTTCTCCATATACGGCATA
TTCATGATAGCAGCGTAATCGAATTGATCAGAGCATGTTGACTCGATACT
TTCTTTGATCTCTTGGTAAAGTTTCTCTTGGCAATCCTGGTTTTTAGCCA
AGAAATACATCATCATGGAGGAAGTACTTGAAACAGTATCAACACCAGCG
ATTAACATGATCAGGGAGTTCGCGATGACAATTCTCTCGATTTCGTCTTT
TTGTCGTTTCGTTTCTTCTGACTTTTCATTTGTCTTGATTTCTTCATTTT
CCTTCTGAAGGATATCGAGACAAGTATCAATAAAGTCATTGCGTCTCTCC
CCACTCTCCTGGCGTTCTTTGATCGCCTTCCTAACAGCTGCAACAAAAAA
ACCCTCTCCTTTCTTGTCAAGAAGCGGCCAATCCAGTTTCCTCAATAAAC
TTGGGAAAAACAAAAACATTAGGAAAGTCAAAAATATCTTGATACTCATT
GTTTTGCCAACCATCAAGTCTGCGTTCGTCTTGAAGATGCTGTTAGTCTC
ATTGACGCTATCGCTCTCATAACCAAAACCTGTGCTTACAATCACATCTA
ATGCATAGTTTCGCAATAATTCTTTGGCTTCGATTTCTTTACCAACATTT
TTCTCTAGAAAGATATCGCAGTGATCGGCAATTTTGTGTATGAGCGGAAC
CATGGCTTTTAGTTTCCCACTGGTAAAAACAGGTGTCAGTGAAGCTCGAA
CACTCTTCCATTGCTGGCCACGCAGTTCAGTTAGCATTACTGGTAGATAT
CGGTTGTTCTTTGTGTGAGGATTATAAGCGTTAGAAGATGCCGGCTTTCT
TTCCATAAATTGGTCAAAATCTTTCACCAAAACTTTCTTAGCAATATCCA
AGTCTCGAATCACGATGCTTGGACGACCAAATAATTCATACGTCCCAACA
ACAGGGGCATCTGGGTAATTCTTGTAAGCATGGTCCGTCATTTGGATGAA
AGCGATTTTCTGCTTGAAGAAATCCCACACATGTTGACTTCCAAATGGAA
AGGTTCCAGGATCAACAGGAATACCTCGACGCTGCCAAAATGTCATTCTA
TGTCTGACAAAGAAATAAAAGGCTGTAAAAGCCACGATAAACGCAGCTAA
CAATATCTGCCACCACATTACGCTAAATCTTCTTGCTTGTTCTGTAGCTC
TTTTTACTGTTGGCGAAAGCTCTGTAAACTTAAAATTTAGATTGTAAAAA
CTGTTATTGAAATGCAAGTTTTCTCGTGCATCCTGTTTATATAAAAGTTT
CAAGGTTTGATGAAATCATCAAATTTCAAAACATGAAACACTCTCCTTTT
TTAGAAGAAGGTTTTTGTTGACTGTTCCATAAAATTGATGATTTCCTTCA
GAGAGCTTGTTAGCAAAAACCGCAGAAAATCGTTAATGATAAAAATATCA
AGATGAGTGACATAATACATGCTTTACTGTTGATGAAGGAAGCACTTTTA
ATGAAACAGAGAGAGAGCTGATAAAAGCTTCCTTGAAAAACTGTCATTAA
ACAATGATACAATCCAGAGCTTTAATTAACTGTTTTGAAACTCGATATTA
TCATTTCTTAACATACCTTAACCCATCTCCCTTTTTTTATTAGGGGAAGC
ATGCTCAACGGCAAAAAGGATGGTCTGTTAAGTTGCGTTGCGTTTTCACG
GAAAATCAGTATCTGTCCTTGTTCGTCGTTAATGGAGTATTACATACCTT
CTAGCAATCTCTGGATCCCTTTTTTGATATGAAATACCGATCATAAACCT
TAATTTGAGACAAATAAGTTCTTATTTTGTTCAATTTTTTAAAAAGTAAC
ATTTTTTGTGCTTTGTGTTTCCTTAAAGCAGTTTTTCCGCTTGCATGCAG
AAAACGCAACGAGAATTAATCACTCCGGGCGGAGAGTATTGCCGGATAGT
CCCTCTATCGGATTCCCACTCAGCACAAATTCTCAATTTAAGACGGGGGG
TTAAAAATCAAAATTTTCTGACAGAATTTTTTATTTATCTGTGTTTTTTT
TTAATTTGAATACATAGTTAATAAAGCCAAAGGACAATGAATTTAGTGCA
GGGTGACTTTCTTAACCAAAATTTATCCCTCTTTTCAAAAACACAAACCA
AAAATTTCTAGGCCTCGTAGTTTTTGTGATTTTTTACAAAGTGTTACCCC
CTGTATATTTTAAACAGATTTCCAAAAGGACAAATAGATTTACGCACCCG
AAATTCGGTTCGGTAAAATCCCGTGGACCAATCAGATCACGGTATTCGTT
TTCCCGCCATTCCAAAAAGTATTTTTTTGAAGCGGCGGTAGTACAGTCAA
GATTTTTCAGAGCTGTAGAAAGAGTGTCTCTTTACAGGCTTGCAGATCAA
CTAACTTCTATAATTTTTTACATTGTTTTTACCTTCTACAAATTGTGTAC
ATGGATACANAAACTTCTATAATTTTTTACATTGTTTTTACCTTTTACAA
CTTGTGTACATGGATACATCAAAATATATTCTATAATCATATTGGGTTTG
AAGTCTTCTATTGACGTGGTAAGTAAAAATCGATTTACTTTATATTCTTT
TCTGGCTCTGGGGTATCCCTACTCGCTACTGTACTTTTGTTTTGTTTGCC
TAAATAAACTCACCTGTTATCTTTTGACTGCAGTTATTTCAGCTGTTTGC
CCTTTTTGATGTATAAGAGATTTGATTAACTAGGTAATATGTGCTTAGGA
TTCTTGCAAATTAAATGAGAAATGATGTTGAACTATAATATAAACACAAA
AAAATGCATCCTAATCCCAACCCAAAATGATACTAGACCAGGGTCAACCA
AAGCATAACCAAGTAATGGTTTAAGCCTTGGAACTCGACTGACTAGGTTG
ACCAATAATCATTTTGGGATACCCTTTTTTTTTTTAATTTTCAGAGCTTG
ACTAAAACCGTGAAGTCGGCCTCGCCTCGGGTAACTTGCATTGCATCAGT
GGAGGGAAACATGCATAGCCATCAAATGACAGGTCATTCAGATGAGGGCT
ATGCATGTTAGCCTCCACTGATGCAAGTTAGCCGATCTCACTGTAATCAC
TAAGGGGATCCATCCAAACTCATATTTTCCACAAACAAAAACGTTGATAT
TGGGCGCTCAGAGGGGTGGGGGTGATGGCAGTTATGATGGAGGTTTACTC
GTTTCCAAGAAATTTTCACTAGAAATAATAATTATAGAGAAGTTCTTTCC
GTTCCAAATGTTACTTTGTCATTTCTGCTTTTTGTTCGCTTCAGCTTTTT
TGAAAACCAAAACAAACGACCAATGTTTAAGTCTCTGGTTCTCTTATCTT
GACGGGCTGCACGACTCTTGAGTTTTTGCAGACGGCCGGTTTGTTTTGCA
GTGATATATATTACAGAGAGATTTCTGTGAAAAAGTTCAGAAATAAGCTT
CTTTTTTTAAAAATGAACTACGGAAAATAAAGATGGCGGAGAAAACAGTG
TTTGAATATTTACAGCAACAAAGCTGACAGAGGGTTGAATAAACGTAATT
AAAGTTTTAATGCCACGATAACGTTAATCGAAGGGGGTTAGGGGAAGGTT
GAATTTAGAACCACAACGATACACAATATGAGCCATAGGAAAAATTAAGA
TGACTGATGAAACAATGAAGCGTAGAGTTAATTATCTTGAAATTAAGTTT
AATTGCCATGCAACGTTATGGAAGGGATGGAAGGAGCTGTTTGAGTTTGG
ATGGTGCCCCTAAGTAAACACAATTTTTTCCCAGAAAACTAGTAGAAAGA
TTCCAGAAAAATAATCAGAATCTCAGTGTGGGAAGTGGCATCTTATTGTT
GTATTATGTATTTTTACTTTTATCAGAACGATGGAATCTTCCCTGCTTGA
TCCTTTGGCATGTGGCTTTGCTAAAGTTGCTGTTTTCAAGATGCTCATCG
ATGATCCTAAGTCACTAAATTTGGCACACTTGTTCCTTAGGTGAATATCT
GGGGTATTTTTTTCATTTTTTGAAAATTTTGATTTTTGGGGCCTGGGGAC
AAGTTTTTCGCCAAAACGAGGCTAAAACTTTGGGGCAGCCTGTAGACTTC
AAAAATTGTTCGATTTGGCTGAAATTTTGCACACTTGTTCCTTGGCTGAA
TTTTTGTAGAATTTTTTTCAATTTTTGAAAATTTTGATTTTTGGGGCCTG
GGGACAAGTTTTTCGCCAAAACGAGGCTAAAACTTTGGGGCAGCCTGTAG
ACTTCAAAAATTGTTCGATTTGGCTGAAATTTTGCCCACTTGTTCCTTGG
GTGAATATCTGGGGCTCTACAATTGGGCCTATGAATAGTTTGAAGGCACT
GAAGTTGAGCCCAGTGCGTTGCGCACGTTCGACTATGTAAAAAACATAGA
AATATAAGGAAAAAATCCAATGAAAATCTGTAAACACGGCGATTTCCGGC
ATTTTCAACCGGAAAAAAAAATTCTCAAAAATCGAACTGGGCCATGTTTT
GAGCGTTGCGAATACGCATCTTTCTGCAAAACGATGCTGTTTTGATCTAA
AAATGCACAATGGTAAGCTGATGGTTGCTCTCCAGGTGATCATTACAGCT
GCAAGAAAAAACGTAAACAGTATGGGGCCGAGAATATCCCCTTGCTTCAC
GCCAATGGTACATGACATTATATGCGTGACTTCGTCTACGGTGAATTTAA
AGGTGAAGTTTTCATGTAAGGATTTAAGAAGACTGGTTAATTTAGGTGGA
ACTCCAAATTTCTCTAAGATAAGCCATGGTAACTGCCTGGGTGCGATCGA
AAGCCTTGACTAGGTCAAGAAAAAATACCCAGGATTCTTTTCCGTGTTCT
CGTCGTTTGTGAAGGGCTGTTTTAACTGTAAAAATGGCATCAATGCAGCC
TCGATCAGGTCTAAACCCACATTGCGGTTCGTGGTCAAGATTTTCTTCGA
TTGGTAATAGGCGAAAATGTAAAATGATTGCAATTATCTTGTAAGCAGTC
TCAAGTAACATGATCCCACGATAATTCTTTGGTAAACCAAGATCGCCTTT
CTTTGGTAGAATCGTCAAACGTCCTACATTCCAGTCATTAGGTATATTTT
CAGTTTGCCAAATTGAAAGTATGATGTTGGTAAGAGCTTGACTGGTTCCT
AGATGATCAATCAAACATTTCCATATTTGTGGTTGTATACCAGAGTCTCG
TGGAGAAGTGTTCTTTAATTTTTGTATAGCTTTTCTGATTTCATCCTCAG
TTGGATCATGGTCGCATCCTTGAACGATGTCGTGATGAGGGATGGGGTCG
AGAACGGATACATTAAAGTTTTCTTCTCTATTGTAGAGATTGTTGAAATG
TTCGTAAAAGACAGTTGCATTTTCTTGAGGAGTGGAACATAAGGTACCAT
TTGGTTTTTTCATTTGTCGAGAAACTGAATGTTTTGGTTTTGAGAGTCCG
TGATTAAGAGCTTTGAGGGATTCTCAAGCTGGTTTCGTACCATGATGACG
ATTGAGTCTTGAACAGTGATTTAAAATCCAATCGTTTTTCGAAAATTATT
ATTCGTTATTGAAAATTGAATTATGCTTGATGGTGGGCTATTAATAATGT
TTTTGAATGAAAAAACAACCAATTATAAGGAAAAAATCCAATGAAAATCC
ATCAAAAATCGAACTCGGCCATGTTTTGGGCATTGTTAATACGCAGAAAA
TCAGAAAAAACTAATGATAAAATCTCGAGAAGATGCCAAAAAAACCCGTG
AACAATCATTTCTGCATTACGTTTCATTCTTTTTACAATGTTTCTCGTCT
TTTCTTCCCATTTTTGAAAAGTTTTTCCTGCCGAAGCCCTGTAACTGGCA
ATACGAAAATGTTGTAATTTTCTCTCAACTGGACGGATTTGTATTTACAG
ATAAAAAATGGCAGCGCTTCGCTTTTTTTTTATTATTCTCCGTTATTTGT
ACGGAATGTAAAAATAGGTATTCATCGTTATAGGATCTGACGATTATATT
TCATTTCTTGCATTTTAAGCGACCCACGTCTTCTTTCATCATCTGTACAT
CCTAACGGTGTGCTAGTTCGAGATGAAGAAACTGCTTCGAAAAGATAGAA
CTTTATGTCCGGATATACATTGAAAGAAAGGAAAAATTTTCAAAGTACGT
ATAACCTTGAAAGATTGAAAGGGGAGGGGAATTAAAAAAATAGATTAGAT
AGCCTAGATAGATTCTTCTCGGTATACCCCTCCACCTGGAAAGCCACGAA
TAGATATCAAACAGAGTTACGAATATCAGAATAACGAAAATCAATCTTTT
GGCCCAAGTTCCCAGAAAAAAATATATATGAGCAAAAGGTCAGGGGTATT
AAAGCGACTGCGCTGATCTGACTGAATTGACGGAATAAAGAAAGGGTGCA
GACGACAAAACTTCAATCTGATTCGGTAGAGGGCTAAAGTCTTAGAAAAG
CTTTTCTTTAAAGAAAACAAGGCCATTTTTATATTCTTTGTACGAGTTTA
AATACGAGTTCAAATGATTTCAAAATGAAAACGTTGGCTACGGGAGAGCT
TCCCCTCCTTTAAATCCATTGACGAATATATACGAGTTTAGCATGGAAGG
GGTTAAAAGGTACTTAAAAATAACCCATTGATTAGAATAAAAATGAATTA
AATGCACTTAAGCACATTCTAAAAACATTATTCCAAAGTTCCCTCTCTGG
TAACCCAACAAGTTCGTGATTTTAAATTCAAGGTCTATTTGAATGGATTC
GATTAATAGAATTAATTAAAGGTAAAAAAAATTAAAGTAAATTTATGAAT
TTAGATTTAATATACAAGCCTTTAAAAATGCTATAAAACTAATTTGCAAA
ATTCAAACAAGATATTCGAGCTTATATAATATAAATGAAACCTAGCGTTA
ATAACAAAACAAGAAGAAACCCTGAGAAGAAGATAATAATTTGTTTAAGT
CATATGCTGATATTATGTTCTTCTGACATCTGCTAGCGAAAGTGTAATTG
ATTTTTAAAATATTGTCATACTGTGCCTTGTAAAAGCTACGGTTTAGTCT
TTTTTTTGTATTATCAAAATTTATGTAAACTTGATGTAACTTAAGATTGG
ATTGAAAACACCTCAACGTTTTTCGACACTAAACCAAACATCGCCTTTGG
GCAGTTGGGAGCGCGATTTGGGGTCTGGAATCAATTCATCCACAGTTTTC
GAACACGGGATGATTTTATATTTACTCAACATGCGGGCCACCACAATTTT
CACTTCCATGGTGGCAAAGCGTTGCGCAATACAATTTCTCGGACCGTGTC
CGAAACCACCGGACGCGAACGGGTGTCTGCCGGCTTTCTTTTCGGCGCTG
AAATTTTCAGGGTCAAAAACCTTCGGGTTGGAGAAATATTTCTCATCTTT
TACAATACCAGTGACGGGAAAACGGACAACGATATCTTTCGGGATGACCA
TTTCAGTTCCTGGAATTTTGTAATCGTTAACCGAAGCACGTTCCAAGTGG
GTCAAAGGATACATTCTAAGACTCTCTTGGAAGAATTTCTCCATATACGG
CATATTCATGATAGCAGCGTAGTTGAATTGATCAGAGCCTGTCGACTCGA
TACTTTCTTTGATCTCTTGGTAAAGTTTCTCTTGGCAATCCTGGTTTTTA
GCCAAGAAATACATCATCATGGAGGAAGTACTTGAAACAGTATCAAAACC
AGCGATTAACATGATCAGGGAATTCGCGATGACGATTCTCTCGATTTCGT
CTTTTTGTCGTTTCGTTTCTTCTGACTTTTCATTTGTCTTGATTTCTTCA
TTTTCCTTCTGAAGGATATCGAGACAAGTATCAATAAAGTCATTGCGTCT
CTCCCCACTCTCCTGGCGTTCTTTGATCGCCTTCCTAACAGCTGCAACAA
AAAAACCCTCTCCTTTCTTGTCAAGAAGCGGCCAATCCAGTTTCCTCAAT
AAACTTGGGAAAAACAAAAACATTAGGAAAGTCAAAAATAATTTGATACT
CATTGTTTTGCCAACCATCAAGTCTGCGTTCGTCTTGAAGATGCTGTCAG
TGTCATTGACGCTATCGCTCTCATAACCAAAACCTGTGCTTACAATCACA
TCTAATGCATAGTTTCTCAATAATTCTTTGGCTTCAATTTCTTTCCCCAC
ATTTTTCTCCAAAAAGACATCGCAGTGATCGGCAATTTCGTGTATGAGCG
GAACCATGGCTTTTAGTTTCCCACTGGTAAAAACAGGTGTCAGTGAAGCT
CGAACACTCTTCCATTGCTGGCCACGCAGTTCAGTTAGCATTACTGGTAA
ATATCGGTTGTTCTTTGTGTGAGGATTGTAAGCGTTAGAAGAGGCCGGCT
TTCTTTCCATGAATTGGTCGAAATCTTTCACCAAAACTTTCTTAGCAATA
TCCAAGTCTCGAATCACGATGCTTGGACGACCAAATAATTCATACGTCCC
AACAACAGGGGCATCTGGGTAATTCTTGTAAGCATGATCCGTCATTTGGA
TGAAAGCGATTTTCTGCTTGAAGAAATCCCACAAATGTTGACTTCCAAAT
GGAAAGGTTCCAGGATCGACAGGAACACCTCGACGCTGCCAAAATGTCAT
CCTATGTCTGACATAGAAATAAAAGGCTGTAAAAGCCACGATAAACGCAG
TTAACAATATCTGCCACCACATTACGCTAAATCTTCTTGCTTGTTGTGTA
GCTCTTTTTACTGTTGGCAAAAGTTCTGTAAACTTTAAATTGTAAAGACT
GTTATTAAAATGCAAGTTTTCTCATGCATCTGTTTATAAAGTTTCAAGAT
TTGATGAAATCATCAAATTTCAAAACATGAAAGACTCTCCATCGTATTTA
TTTTAACCTTTTTTAGAAGAAGGTTTTTGTTGACTGTTCCATAAAATTGA
TTATTTCCTTCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069959-exon-scaffold_511-1575043694:218033..219328 | TCONS_00069959-exon-scaffold_511-1575043694:218033..219328 | Clytia hemisphaerica | exon |
| TCONS_00069959-exon-scaffold_511-1575043694:209766..210528 | TCONS_00069959-exon-scaffold_511-1575043694:209766..210528 | Clytia hemisphaerica | exon |
| TCONS_00069959-exon-scaffold_511-1510915933:218033..219328 | TCONS_00069959-exon-scaffold_511-1510915933:218033..219328 | Clytia hemisphaerica | exon |
| TCONS_00069959-exon-scaffold_511-1510915933:209766..210528 | TCONS_00069959-exon-scaffold_511-1510915933:209766..210528 | Clytia hemisphaerica | exon |
| TCONS_00069959-exon-scaffold_511-1491911889:218033..219328 | TCONS_00069959-exon-scaffold_511-1491911889:218033..219328 | Clytia hemisphaerica | exon |
| TCONS_00069959-exon-scaffold_511-1491911889:209766..210528 | TCONS_00069959-exon-scaffold_511-1491911889:209766..210528 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_511 | supercontig | scaffold_511:209766..219328 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005506 | iron ion binding |
| GO:0020037 | heme binding |
| GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0055114 |
oxidation-reduction process |
| molecular_function |
GO:0020037 |
heme binding |
| molecular_function |
GO:0005506 |
iron ion binding |
| molecular_function |
GO:0016705 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
Blast
BLAST of TCONS_00069959 vs. Swiss-Prot (Human)
Match: CP3A4 (Cytochrome P450 3A4 OS=Homo sapiens GN=CYP3A4 PE=1 SV=4) HSP 1 Score: 204.142 bits (518), Expect = 3.852e-57 Identity = 146/479 (30.48%), Postives = 235/479 (49.06%), Query Frame = -2
Query: 340 YVRHRMTFWQRRGVPVDPGTFPFGSQHLWDFFKQKIAFIQMTDHAYKNYPDAPVVGTYELFGRPSIVIRDLDIAKKVLVKD-FDQFMERKPASSNAYNPHTKNNRYLPVMLTELRGQQWKSVRASLTPVFTSGKLKAMVPLIHEIADHC--DVFLEKNVGKEIEAKELLRNYALDVIVSTGFGYESDSVNETNSIFKTNADLMVGKTMSIKIFLTFLMFLFFPSLLRKLDWPLLDKKGEGFFVAAVRKAIKERQESGER-RNDFIDTCLDILQKENEEIKTNEKSEETKRQKDEIERIVIANSLIMLIAGVDTVXXXXXXXMYFLAKNQDCQEKLYQEIKESIESTCSDQFDYAAIMNMPYMEKFFQESLRMYPVT-HLERGSVNDYKIPGTEMVIPKDIVVRFPVTGIVKDEKYFSNPNVFDPENFSAEKKADRHPFASGGFGHGPRNCIAQRFATMEVKIVVARMLSKYKVIPCSKT 1761
Y H +++ G+P P PF L + F +K Y V G Y+ +P + I D D+ K VLVK+ + F R+P + + ++ ++WK +R+ L+P FTSGKLK MVP+I + D ++ E GK + K++ Y++DVI ST FG DS+N F N ++ FL+ +F F +L L+ + ++ F +V++ + R E ++ R DF+ +D ++ S+ET+ K + ++A S+I + AG +T SS S +MY LA + D Q+KL +EI + + +D ++ M Y++ E+LR++P+ LER D +I G M IPK +VV P + +D KY++ P F PE FS + K + P+ FG GPRNCI RFA M +K+ + R+L + PC +T
Sbjct: 25 YGTHSHGLFKKLGIP-GPTPLPF----LGNILSYHKGFCMFDMECHKKY--GKVWGFYD-GQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGF---------MKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMID-----------SQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYD--TVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEING--MFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKET 471
The following BLAST results are available for this feature:
|
